Csor.00g041280 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g041280
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	short-chain dehydrogenase TIC 32, chloroplastic-like
Location	Csor_Chr02: 5708639 .. 5710253 (+)
RNA-Seq Expression	Csor.00g041280
Synteny	Csor.00g041280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGATTCTTTCTACTACCTCGCCGGCTCCCCCGGCCCCTCCGGCTTCGGCTCCAAATCCACCGCCGAACAAGTCACCGCCTCCTCTCCTCTCCCCCTCCCTTCCCTCACCGCCATCATCACCGGTATTACTCTCCTCTCTTCTCTCCGTCTCACCCTTTTATTTATTTATTTATTTATTTATTTATTTGTTTTTCTCAGGCGCCACGTCTGGTATTGGAGCTGAGACGGCTCGGGTTCTAGCCAAACGTGGGGTTCGTCTCATCCTCCCCTCCCGGAACCTGAAAGCCGCCGAGGAAACCAAGGCGCGGATCCTCTCCGAATGCTCCGATTCCCAAATCATCGTTATGCCACTTGATTTGAGCTCTCTTTCTTCCGTTACAAACTTTGTTCATCAATTTCAATCTCTCAACCTTCCTCTAAACCTCCTCATGTAAATTTCCCTTTTCTTTCATCACTCTAATTATTCTCTTAACCATAAAGCTGTTATTCATTTTAATTTTTTTTTTTTTTAAAAATTTTAGAAATAACGCTGGCAAATTCTCGCATGACCACGCAATTTCCGAGGACGGGATCGAAATGACCTTCGCCACTAATTATTTGGGTAATTTAAAAAAAAATACAAATATTATGTATTTTGAAGTTTATTTATATTATGTGATAAATAATTATTATTATTTTGCTCAGGTCATTTTCTGTTGACGAAACTGTTGGTGAATACGATGGCGGACACGGCGAAAGCGACGGGGGTTGAAGGGCGGATAGTGAACGTGTCGTCGAGTATTCACGGGTGGTTTTCCGGCGACATGATTAAATATCTGGGCCAGATAAGCCGGAACAAAAGGTGAGTTTCTTCAATGAATGGGGGGGTTTGACTTCGGGTATTAATTATTGTAATACAGTTAATGTGGGTGGATTCCCAGCAGGAACTACGATGCCACACGTGCGTACGCGCTCTCCAAGCTTGCCAACGTTCTTCACACGCACGAACTCGCTCGCAGATTGAAGGTTCTTTACATTCTAATATTATTTATTACCTCTTCTTCATTTTTGGGTTTATTTATTTATTTATTTATTTATTTTGATTTAGCAAATGGAAGCTAATGTTAGTGTGAACTGCGTTCATCCCGGAATTGTAAGAACTCGACTCACCAGAGATCGTGAAGGTTTCATAACTGGTATGAATTTTATTTTATTTTATTTTATTTTTCTTTTAGGTTAATTCAATATTAAATAAATAAATAAACAAAAATGCAGATTTGGTGTTCTTTATGGCTTCCAAGCTGTTGAAGACAATCCCTCAGGTAAACAATTCAAAACCTCTGGATAATATTAATAATAAAAAAAAAAAAAAAAAACTGAAAAAGAAGATTAAAACTGACACCGGCCGCCTGAATGCTCTTCTTGGACAGGCGGCGGCAACGACATGCTACGTGGCGACGAGCCCGAGGTTAAGCCACGTCACCGGGAAGTATTTTTCAGACTGCAACGAAGCCTCGCCGTCGAAGCTCGCCGCTAGCCCAACGGCAGCCGCCCGTCTCTGGTCCGCCTCCGAGATTATGGTCAACACTAAGTCAAAGCTGGTTTTCGATCCAAACAACGGGTTGGAGTAA

mRNA sequence

ATGCTCGATTCTTTCTACTACCTCGCCGGCTCCCCCGGCCCCTCCGGCTTCGGCTCCAAATCCACCGCCGAACAAGTCACCGCCTCCTCTCCTCTCCCCCTCCCTTCCCTCACCGCCATCATCACCGGCGCCACGTCTGGTATTGGAGCTGAGACGGCTCGGGTTCTAGCCAAACGTGGGGTTCGTCTCATCCTCCCCTCCCGGAACCTGAAAGCCGCCGAGGAAACCAAGGCGCGGATCCTCTCCGAATGCTCCGATTCCCAAATCATCGTTATGCCACTTGATTTGAGCTCTCTTTCTTCCGTTACAAACTTTGTTCATCAATTTCAATCTCTCAACCTTCCTCTAAACCTCCTCATAAATAACGCTGGCAAATTCTCGCATGACCACGCAATTTCCGAGGACGGGATCGAAATGACCTTCGCCACTAATTATTTGGGTCATTTTCTGTTGACGAAACTGTTGGTGAATACGATGGCGGACACGGCGAAAGCGACGGGGGTTGAAGGGCGGATAGTGAACGTGTCGTCGAGTATTCACGGGTGGTTTTCCGGCGACATGATTAAATATCTGGGCCAGATAAGCCGGAACAAAAGCAGGAACTACGATGCCACACGTGCGTACGCGCTCTCCAAGCTTGCCAACGTTCTTCACACGCACGAACTCGCTCGCAGATTGAAGCAAATGGAAGCTAATGTTAGTGTGAACTGCGTTCATCCCGGAATTGTAAGAACTCGACTCACCAGAGATCGTGAAGGTTTCATAACTGATTTGGTGTTCTTTATGGCTTCCAAGCTGTTGAAGACAATCCCTCAGGCGGCGGCAACGACATGCTACGTGGCGACGAGCCCGAGGTTAAGCCACGTCACCGGGAAGTATTTTTCAGACTGCAACGAAGCCTCGCCGTCGAAGCTCGCCGCTAGCCCAACGGCAGCCGCCCGTCTCTGGTCCGCCTCCGAGATTATGGTCAACACTAAGTCAAAGCTGGTTTTCGATCCAAACAACGGGTTGGAGTAA

Coding sequence (CDS)

ATGCTCGATTCTTTCTACTACCTCGCCGGCTCCCCCGGCCCCTCCGGCTTCGGCTCCAAATCCACCGCCGAACAAGTCACCGCCTCCTCTCCTCTCCCCCTCCCTTCCCTCACCGCCATCATCACCGGCGCCACGTCTGGTATTGGAGCTGAGACGGCTCGGGTTCTAGCCAAACGTGGGGTTCGTCTCATCCTCCCCTCCCGGAACCTGAAAGCCGCCGAGGAAACCAAGGCGCGGATCCTCTCCGAATGCTCCGATTCCCAAATCATCGTTATGCCACTTGATTTGAGCTCTCTTTCTTCCGTTACAAACTTTGTTCATCAATTTCAATCTCTCAACCTTCCTCTAAACCTCCTCATAAATAACGCTGGCAAATTCTCGCATGACCACGCAATTTCCGAGGACGGGATCGAAATGACCTTCGCCACTAATTATTTGGGTCATTTTCTGTTGACGAAACTGTTGGTGAATACGATGGCGGACACGGCGAAAGCGACGGGGGTTGAAGGGCGGATAGTGAACGTGTCGTCGAGTATTCACGGGTGGTTTTCCGGCGACATGATTAAATATCTGGGCCAGATAAGCCGGAACAAAAGCAGGAACTACGATGCCACACGTGCGTACGCGCTCTCCAAGCTTGCCAACGTTCTTCACACGCACGAACTCGCTCGCAGATTGAAGCAAATGGAAGCTAATGTTAGTGTGAACTGCGTTCATCCCGGAATTGTAAGAACTCGACTCACCAGAGATCGTGAAGGTTTCATAACTGATTTGGTGTTCTTTATGGCTTCCAAGCTGTTGAAGACAATCCCTCAGGCGGCGGCAACGACATGCTACGTGGCGACGAGCCCGAGGTTAAGCCACGTCACCGGGAAGTATTTTTCAGACTGCAACGAAGCCTCGCCGTCGAAGCTCGCCGCTAGCCCAACGGCAGCCGCCCGTCTCTGGTCCGCCTCCGAGATTATGGTCAACACTAAGTCAAAGCTGGTTTTCGATCCAAACAACGGGTTGGAGTAA

Protein sequence

MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRGVRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLINNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIHGWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHPGIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEASPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE

Homology

[Close]

BLAST of Csor.00g041280 vs. ExPASy Swiss-Prot
Match: A0A078IS66 (Short-chain dehydrogenase TIC 32 A, chloroplastic OS=Brassica napus OX=3708 GN=TIC32A PE=2 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 6.1e-71
Identity = 156/326 (47.85%), Postives = 209/326 (64.11%), Query Frame = 0


Query: 2   LDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRGV 61
           ++ +  + G  G SG+GS STAE VT S  +    LTAIITG TSGIG E ARVL  RG 
Sbjct: 1   MEIYGMVTGKAGKSGYGSASTAEDVTHS--IDAKHLTAIITGGTSGIGLEAARVLGMRGA 60

Query: 62  RLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLIN 121
            +I+ SRN KAA ++K  IL    +++I  + LDLSS+ SV +F+HQF +LN+PLN+LIN
Sbjct: 61  HVIIASRNTKAANDSKEMILQMYPNARIDCLQLDLSSIKSVRSFIHQFLALNVPLNILIN 120

Query: 122 NAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH- 181
           NAG       +SEDGIE  FATN++GHFLLT LL++ M  +A+ +G+EGRIVN+SS  H 
Sbjct: 121 NAGVMFCPFQLSEDGIESQFATNHIGHFLLTNLLLDKMKSSARESGIEGRIVNLSSIAHT 180

Query: 182 -GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVH 241
             +  G M  Y+     N    Y   +AY  SKLAN+LH++ L+R+L++   N+++N VH
Sbjct: 181 YTYTEGIMFDYI-----NDPDRYSEKKAYGQSKLANLLHSNALSRKLQEEGVNITINSVH 240

Query: 242 PGIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNE 301
           PG++ T L R   G    ++  M+  L K IPQ AATTCYVA  P L  VTGKYF+DCN 
Sbjct: 241 PGLITTNLFR-HSGLGMAVLKAMSFFLWKNIPQGAATTCYVALHPDLKDVTGKYFADCNV 300

Query: 302 ASPSKLAASPTAAARLWSASEIMVNT 326
            +PS  A   T A +LW  S  +V +
Sbjct: 301 TTPSNFAIDTTLADKLWDFSIKLVES 318

[Close]

BLAST of Csor.00g041280 vs. ExPASy Swiss-Prot
Match: A0A078ISJ6 (Short-chain dehydrogenase TIC 32 B, chloroplastic OS=Brassica napus OX=3708 GN=TIC32B PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 1.4e-70
Identity = 155/326 (47.55%), Postives = 210/326 (64.42%), Query Frame = 0


Query: 2   LDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRGV 61
           ++ +  + G  G SG+GS STAE VT S  +    LTAIITG TSGIG E ARVL  RG 
Sbjct: 1   MEIYGMVTGKAGKSGYGSASTAEDVTHS--IDAKHLTAIITGGTSGIGLEAARVLGMRGA 60

Query: 62  RLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLIN 121
            +I+ +RN KAA ++K  IL    +++I  + LDLSS+ SV +F+HQF +LN+PLN+LIN
Sbjct: 61  HVIIAARNTKAANDSKEMILQMYPNARIDCLQLDLSSIKSVRSFIHQFLALNVPLNILIN 120

Query: 122 NAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH- 181
           NAG       +SEDGIE  FATN++GHFLLT LL++ M  +A+ +G+EGRIVN+SS  H 
Sbjct: 121 NAGVMFCPFQLSEDGIESQFATNHIGHFLLTNLLLDKMKSSARESGIEGRIVNLSSIAHT 180

Query: 182 -GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVH 241
             +  G M  Y+     N    Y   +AY  SKLAN+LH++ L+R+L++   N+++N VH
Sbjct: 181 YTYTEGIMFDYI-----NDPDRYSEKKAYGQSKLANLLHSNALSRKLQEEGVNITINSVH 240

Query: 242 PGIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNE 301
           PG++ T L R   G    ++  M+  L K IPQ AATTCYVA  P L  VTGKYF+DCN 
Sbjct: 241 PGLITTNLFR-HSGLGMAVLKAMSFFLWKNIPQGAATTCYVALHPDLKGVTGKYFTDCNV 300

Query: 302 ASPSKLAASPTAAARLWSASEIMVNT 326
            +PS  A   T A +LW  S  +V++
Sbjct: 301 TTPSNFAIDTTLADKLWDFSIKLVDS 318

[Close]

BLAST of Csor.00g041280 vs. ExPASy Swiss-Prot
Match: A2RVM0 (Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC32 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 5.0e-65
Identity = 141/318 (44.34%), Postives = 205/318 (64.47%), Query Frame = 0


Query: 10  GSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRGVRLILPSRN 69
           GS G SGF S+STAE+VT    +    LTAI+TGA+SGIG ETARVL+ RGV +++  RN
Sbjct: 5   GSKGASGFSSRSTAEEVTHG--VDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAVRN 64

Query: 70  LKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLINNAGKFSHD 129
             +  + K  I+ +   +++ VM LDLSS+ SV  F  +++S  LPLNLLINNAG  +  
Sbjct: 65  TDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMACP 124

Query: 130 HAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIHGWFSGDMIK 189
             +S+D IE+ FATN+LGHFLLTKLL++TM  T++ +  EGRIVN+SS  H +   + ++
Sbjct: 125 FMLSKDNIELQFATNHLGHFLLTKLLLDTMKSTSRESKREGRIVNLSSEAHRFSYPEGVR 184

Query: 190 YLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHPGIVRTRLTR 249
           +      N   +Y + RAY  SKL NVLH +EL ++LK+   N++ N +HPG + T L R
Sbjct: 185 F---DKINDKSSYSSMRAYGQSKLCNVLHANELTKQLKEDGVNITANSLHPGAIMTNLGR 244

Query: 250 DREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEASPSKLAASP 309
               ++   V  +A  +LK++PQ AATTCYVA +P+++ V+G+YF D N A P  L    
Sbjct: 245 YFNPYLAVAVGAVAKYILKSVPQGAATTCYVALNPQVAGVSGEYFQDSNIAKPLPLVKDT 304

Query: 310 TAAARLWSASEIMVNTKS 328
             A ++W  S  + +++S
Sbjct: 305 ELAKKVWDFSTKLTDSQS 317

[Close]

BLAST of Csor.00g041280 vs. ExPASy Swiss-Prot
Match: Q6RVV4 (Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC32 PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 8.3e-60
Identity = 138/314 (43.95%), Postives = 190/314 (60.51%), Query Frame = 0


Query: 13  GPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRGVRLILPSRNLKA 72
           G SGF   STAEQVT    +    LTAI+TGA+SGIGAET RVLA RG  +I+  RN+ A
Sbjct: 9   GVSGFSGSSTAEQVTHG--IDATGLTAIVTGASSGIGAETTRVLALRGAHVIMGVRNMVA 68

Query: 73  AEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLINNAGKFSHDHAI 132
           A++ K  IL +   +++  + LDLSSL SV  F  +F S   PLN+LINNAG  +    +
Sbjct: 69  AKDVKDTILKDIPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNILINNAGIMACPFKL 128

Query: 133 SEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIHGWFSGDMIKYLG 192
           S+D IE+ FATN++GHFLLT LL++TM  T + +  EGRIVNV+S  H +   + I++  
Sbjct: 129 SKDNIELQFATNHIGHFLLTNLLLDTMKKTTRESKKEGRIVNVASEAHRFAYPEGIRF-- 188

Query: 193 QISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHPGIVRTRLTRDRE 252
               N   +Y+  RAY  SKLANVLH ++L + LK+   N++ N +HPG + T L R   
Sbjct: 189 -DKINDQSSYNNWRAYGQSKLANVLHANQLTKHLKEDGVNITANSLHPGTIVTNLFRHNS 248

Query: 253 GFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEASPSKLAASPTAA 312
             +  L+  +   +LK + Q AATTCYVA  P++  V+G+YFSD N    +        A
Sbjct: 249 A-VNGLINVIGKLVLKNVQQGAATTCYVALHPQVKGVSGEYFSDSNVYKTTPHGKDVDLA 308

Query: 313 ARLWSASEIMVNTK 327
            +LW  S  +V  K
Sbjct: 309 KKLWDFSINLVKQK 316

[Close]

BLAST of Csor.00g041280 vs. ExPASy Swiss-Prot
Match: P59837 (Retinol dehydrogenase 12 OS=Bos taurus OX=9913 GN=RDH12 PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 4.3e-40
Identity = 112/283 (39.58%), Postives = 160/283 (56.54%), Query Frame = 0


Query: 40  IITGATSGIGAETARVLAKRGVRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSL 99
           +ITGA +GIG ETAR LA+RG R+ +  R++   E   + I ++  +SQ++V  LDLS  
Sbjct: 43  VITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIQADTKNSQVLVRKLDLSDT 102

Query: 100 SSVTNFVHQFQSLNLPLNLLINNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTM 159
            S+  F   F +    L++LINNAG     ++ + DG E   A N+LGHFLLT LL+  +
Sbjct: 103 KSIRAFAEGFLAEEKQLHILINNAGVMLCPYSKTADGFETHLAVNHLGHFLLTHLLLGRL 162

Query: 160 ADTAKATGVEGRIVNVSSSIHGWFSGDMIKYLGQI---SRNKSRNYDATRAYALSKLANV 219
            ++A A     R+VN+SS  H         +LG+I        + Y+   AY  SKLANV
Sbjct: 163 KESAPA-----RVVNLSSVAH---------HLGKIRFHDLQGDKYYNLGFAYCHSKLANV 222

Query: 220 LHTHELARRLKQMEANVSVNCVHPGIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAAT 279
           L T ELA+RLK     V+   VHPGIVR++L   R  F+  L++ + S  LKT  + A T
Sbjct: 223 LFTRELAKRLK--GTGVTTYAVHPGIVRSKLV--RHSFLLCLLWRLFSPFLKTTWEGAQT 282

Query: 280 TCYVATSPRLSHVTGKYFSDCNEASPSKLAASPTAAARLWSAS 320
           + + A +  L  ++GKYFSDC +   S  A +   A RLW+ S
Sbjct: 283 SLHCALAEGLEPLSGKYFSDCKKTWVSPRARNNKTAERLWNVS 307

[Close]

BLAST of Csor.00g041280 vs. NCBI nr
Match: KAG6605574.1 (Short-chain dehydrogenase TIC 32 A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 656 bits (1692), Expect = 3.28e-237
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60
           MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG
Sbjct: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60

Query: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120
           VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI
Sbjct: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120

Query: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH 180
           NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH
Sbjct: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH 180

Query: 181 GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240
           GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP
Sbjct: 181 GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240

Query: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300
           GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA
Sbjct: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300

Query: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE 338
           SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE
Sbjct: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE 338

[Close]

BLAST of Csor.00g041280 vs. NCBI nr
Match: XP_023534459.1 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 652 bits (1682), Expect = 1.10e-235
Identity = 336/338 (99.41%), Postives = 337/338 (99.70%), Query Frame = 0


Query: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60
           MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG
Sbjct: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60

Query: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120
           VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI
Sbjct: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120

Query: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH 180
           NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMA+TAKATGVEGRIVNVSSSIH
Sbjct: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMAETAKATGVEGRIVNVSSSIH 180

Query: 181 GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240
           GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP
Sbjct: 181 GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240

Query: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300
           GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRL HVTGKYFSDCNEA
Sbjct: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLIHVTGKYFSDCNEA 300

Query: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE 338
           SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE
Sbjct: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE 338

[Close]

BLAST of Csor.00g041280 vs. NCBI nr
Match: XP_022957740.1 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 651 bits (1680), Expect = 2.21e-235
Identity = 336/338 (99.41%), Postives = 337/338 (99.70%), Query Frame = 0


Query: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60
           MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKR 
Sbjct: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRR 60

Query: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120
           VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI
Sbjct: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120

Query: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH 180
           NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMA+TAKATGVEGRIVNVSSSIH
Sbjct: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMAETAKATGVEGRIVNVSSSIH 180

Query: 181 GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240
           GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP
Sbjct: 181 GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240

Query: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300
           GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA
Sbjct: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300

Query: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE 338
           SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE
Sbjct: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE 338

[Close]

BLAST of Csor.00g041280 vs. NCBI nr
Match: KAG7035489.1 (Short-chain dehydrogenase TIC 32, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 650 bits (1676), Expect = 8.67e-235
Identity = 337/338 (99.70%), Postives = 337/338 (99.70%), Query Frame = 0


Query: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60
           MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG
Sbjct: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60

Query: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120
           VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI
Sbjct: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120

Query: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH 180
           NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH
Sbjct: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH 180

Query: 181 GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240
           GWFSGDMIKYLGQISRNK RNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP
Sbjct: 181 GWFSGDMIKYLGQISRNK-RNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240

Query: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300
           GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA
Sbjct: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300

Query: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE 338
           SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE
Sbjct: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE 337

[Close]

BLAST of Csor.00g041280 vs. NCBI nr
Match: XP_023534460.1 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 646 bits (1666), Expect = 2.90e-233
Identity = 335/338 (99.11%), Postives = 336/338 (99.41%), Query Frame = 0


Query: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60
           MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG
Sbjct: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60

Query: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120
           VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI
Sbjct: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120

Query: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH 180
           NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMA+TAKATGVEGRIVNVSSSIH
Sbjct: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMAETAKATGVEGRIVNVSSSIH 180

Query: 181 GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240
           GWFSGDMIKYLGQISRNK RNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP
Sbjct: 181 GWFSGDMIKYLGQISRNK-RNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240

Query: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300
           GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRL HVTGKYFSDCNEA
Sbjct: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLIHVTGKYFSDCNEA 300

Query: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE 338
           SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE
Sbjct: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE 337

[Close]

BLAST of Csor.00g041280 vs. ExPASy TrEMBL
Match: A0A6J1H1D2 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459194 PE=3 SV=1)

HSP 1 Score: 651 bits (1680), Expect = 1.07e-235
Identity = 336/338 (99.41%), Postives = 337/338 (99.70%), Query Frame = 0


Query: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60
           MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKR 
Sbjct: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRR 60

Query: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120
           VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI
Sbjct: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120

Query: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH 180
           NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMA+TAKATGVEGRIVNVSSSIH
Sbjct: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMAETAKATGVEGRIVNVSSSIH 180

Query: 181 GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240
           GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP
Sbjct: 181 GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240

Query: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300
           GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA
Sbjct: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300

Query: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE 338
           SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE
Sbjct: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE 338

[Close]

BLAST of Csor.00g041280 vs. ExPASy TrEMBL
Match: A0A6J1H032 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459194 PE=3 SV=1)

HSP 1 Score: 645 bits (1664), Expect = 2.83e-233
Identity = 335/338 (99.11%), Postives = 336/338 (99.41%), Query Frame = 0


Query: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60
           MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKR 
Sbjct: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRR 60

Query: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120
           VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI
Sbjct: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120

Query: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH 180
           NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMA+TAKATGVEGRIVNVSSSIH
Sbjct: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMAETAKATGVEGRIVNVSSSIH 180

Query: 181 GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240
           GWFSGDMIKYLGQISRNK RNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP
Sbjct: 181 GWFSGDMIKYLGQISRNK-RNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240

Query: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300
           GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA
Sbjct: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300

Query: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE 338
           SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE
Sbjct: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE 337

[Close]

BLAST of Csor.00g041280 vs. ExPASy TrEMBL
Match: A0A6J1JZY1 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491218 PE=3 SV=1)

HSP 1 Score: 644 bits (1661), Expect = 8.43e-233
Identity = 330/338 (97.63%), Postives = 335/338 (99.11%), Query Frame = 0


Query: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60
           MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG
Sbjct: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60

Query: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120
           VRLILPSRNLKAAEETK+RILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI
Sbjct: 61  VRLILPSRNLKAAEETKSRILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120

Query: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH 180
           NNAGKFSH+HAISEDGIEMTFATNYLGHFLLTKLLVNTM +TAK TGVEGRIVNVSSSIH
Sbjct: 121 NNAGKFSHEHAISEDGIEMTFATNYLGHFLLTKLLVNTMVETAKETGVEGRIVNVSSSIH 180

Query: 181 GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240
           GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANV+VNCVHP
Sbjct: 181 GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVTVNCVHP 240

Query: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300
           GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA
Sbjct: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300

Query: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE 338
           SPSKLAASPTAAARLWS SEIMVN+KSKLVFDPNNGLE
Sbjct: 301 SPSKLAASPTAAARLWSTSEIMVNSKSKLVFDPNNGLE 338

[Close]

BLAST of Csor.00g041280 vs. ExPASy TrEMBL
Match: A0A6J1K910 (short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491218 PE=3 SV=1)

HSP 1 Score: 638 bits (1645), Expect = 2.23e-230
Identity = 329/338 (97.34%), Postives = 334/338 (98.82%), Query Frame = 0


Query: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60
           MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG
Sbjct: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60

Query: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120
           VRLILPSRNLKAAEETK+RILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI
Sbjct: 61  VRLILPSRNLKAAEETKSRILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120

Query: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH 180
           NNAGKFSH+HAISEDGIEMTFATNYLGHFLLTKLLVNTM +TAK TGVEGRIVNVSSSIH
Sbjct: 121 NNAGKFSHEHAISEDGIEMTFATNYLGHFLLTKLLVNTMVETAKETGVEGRIVNVSSSIH 180

Query: 181 GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240
           GWFSGDMIKYLGQISRNK RNYDATRAYALSKLANVLHTHELARRLKQMEANV+VNCVHP
Sbjct: 181 GWFSGDMIKYLGQISRNK-RNYDATRAYALSKLANVLHTHELARRLKQMEANVTVNCVHP 240

Query: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300
           GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA
Sbjct: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300

Query: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE 338
           SPSKLAASPTAAARLWS SEIMVN+KSKLVFDPNNGLE
Sbjct: 301 SPSKLAASPTAAARLWSTSEIMVNSKSKLVFDPNNGLE 337

[Close]

BLAST of Csor.00g041280 vs. ExPASy TrEMBL
Match: A0A0A0KKE2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G149870 PE=3 SV=1)

HSP 1 Score: 575 bits (1483), Expect = 1.00e-205
Identity = 297/338 (87.87%), Postives = 312/338 (92.31%), Query Frame = 0


Query: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60
           ML SF YL+GSPGPSGFGSKSTAE VTAS P   PS TAIITGATSGIGAETAR+LAKRG
Sbjct: 1   MLLSFNYLSGSPGPSGFGSKSTAEHVTASLP---PSFTAIITGATSGIGAETARILAKRG 60

Query: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120
            RLILPSRN+KAAEETKARI SECSDS+IIVM LDLSSLSSV  FV QF+SLNLPLNLLI
Sbjct: 61  ARLILPSRNIKAAEETKARIESECSDSEIIVMSLDLSSLSSVRTFVSQFESLNLPLNLLI 120

Query: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH 180
           NNAGKFSH+HAI+EDGIEMTFATNYLGHFLLTKLLVN M +TAK TGVEGRIVNVSSSIH
Sbjct: 121 NNAGKFSHEHAITEDGIEMTFATNYLGHFLLTKLLVNKMVETAKVTGVEGRIVNVSSSIH 180

Query: 181 GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240
           GWFSGD++KYLGQISRNKSRNYDATRAYALSKLANVLHTHELARR KQM ANV+VNCVHP
Sbjct: 181 GWFSGDILKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRFKQMGANVTVNCVHP 240

Query: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300
           GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVAT+PRL HVTGKYF DCNE+
Sbjct: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATNPRLRHVTGKYFVDCNES 300

Query: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDPNNGLE 338
           SPSKLA SP+ AARLWSASEIMVN  SKL+FDPNN LE
Sbjct: 301 SPSKLAGSPSEAARLWSASEIMVNANSKLLFDPNNALE 335

[Close]

BLAST of Csor.00g041280 vs. TAIR 10
Match: AT4G24050.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 451.1 bits (1159), Expect = 8.1e-127
Identity = 233/333 (69.97%), Postives = 283/333 (84.98%), Query Frame = 0


Query: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60
           M+++  YL G+ G SGFGSKSTAE+VT +    L S+TA+ITGATSGIGAETARVLAKRG
Sbjct: 1   MIETGKYLLGAAGASGFGSKSTAEEVTEN--CDLRSITAVITGATSGIGAETARVLAKRG 60

Query: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120
            RLI P+RN+KAAEE K RI+SE  +++I+VM LDLSS++SV NFV  F+SL+LPLNLLI
Sbjct: 61  ARLIFPARNVKAAEEAKERIVSEFPETEIVVMKLDLSSIASVRNFVADFESLDLPLNLLI 120

Query: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH 180
           NNAGK +H+HAISEDGIEMTFATNYLGHFLLT LL+N M  TA+ TGV+GRIVNV+S IH
Sbjct: 121 NNAGKLAHEHAISEDGIEMTFATNYLGHFLLTNLLLNKMIQTAEETGVQGRIVNVTSGIH 180

Query: 181 GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240
           GWFSGD+I+YL  IS+ K + +DATRAYALSKLANVLHT EL+ RL+++ ANV+VNCVHP
Sbjct: 181 GWFSGDLIEYLRLISQPKCQ-FDATRAYALSKLANVLHTKELSSRLQKIGANVTVNCVHP 240

Query: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300
           G+VRTRLTRDREG +TDLVFF+ASKL+KT+PQAAATTCYVAT+PRL +V+GKYF+DCNE 
Sbjct: 241 GVVRTRLTRDREGLLTDLVFFLASKLVKTVPQAAATTCYVATNPRLVNVSGKYFTDCNET 300

Query: 301 SPSKLAASPTAAARLWSASEIMVNTKSKLVFDP 334
           +PS L  + + A +LW+ASEI+V   SK  FDP
Sbjct: 301 TPSGLGTNSSEATKLWAASEILVTQHSKTSFDP 330

[Close]

BLAST of Csor.00g041280 vs. TAIR 10
Match: AT1G64590.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 448.7 bits (1153), Expect = 4.0e-126
Identity = 233/324 (71.91%), Postives = 277/324 (85.49%), Query Frame = 0


Query: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60
           M+++  +L GS GPSGFGS+STA+ VT +S   L SLTAIITGATSGIGAETARVLAKRG
Sbjct: 1   MIETVKHLIGSGGPSGFGSRSTADHVTCNS--DLRSLTAIITGATSGIGAETARVLAKRG 60

Query: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120
            RL+LP+R++K AEETKARILSE  D++IIVM LDLSSL+SV  FV  F+SLNLPLN+LI
Sbjct: 61  ARLVLPARSVKTAEETKARILSEFPDAEIIVMHLDLSSLTSVRRFVDDFESLNLPLNILI 120

Query: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH 180
           NNAGK++H HA+SEDG+EMTFATNYLGHFLLTKLL+  M +TA  TGV+GRIVNV+S +H
Sbjct: 121 NNAGKYAHKHALSEDGVEMTFATNYLGHFLLTKLLLKKMIETAAQTGVQGRIVNVTSVVH 180

Query: 181 GWFSGDMIKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHP 240
            WFSGDM++YL  ISRN +RNYDATRAYALSKLANVLHT EL+R L +M+ANV+ NCVHP
Sbjct: 181 SWFSGDMLQYLADISRN-NRNYDATRAYALSKLANVLHTVELSRLLHKMDANVTANCVHP 240

Query: 241 GIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEA 300
           GIV+TRLTRDREG +TDLVFF+ SKLLK++PQAAATTCYVATSPRL +V GKYFSDCNEA
Sbjct: 241 GIVKTRLTRDREGVVTDLVFFLTSKLLKSVPQAAATTCYVATSPRLRNVCGKYFSDCNEA 300

Query: 301 SPSKLAASPTAAARLWSASEIMVN 325
             SK  +    A RLW+AS+++V+
Sbjct: 301 RSSKSGSCNLKAQRLWTASDLLVS 321

[Close]

BLAST of Csor.00g041280 vs. TAIR 10
Match: AT5G50130.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 321.2 bits (822), Expect = 9.7e-88
Identity = 178/327 (54.43%), Postives = 228/327 (69.72%), Query Frame = 0


Query: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60
           M  +  YLAG  GP+GFGS+STAEQVT  S  P   LTAIITG TSGIGAETARVLAKRG
Sbjct: 1   MKGTLRYLAGIAGPNGFGSRSTAEQVTQHSFFPCSHLTAIITGGTSGIGAETARVLAKRG 60

Query: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120
           VR+++  R++K AE  K RI+ E  ++ II+  +DLSSLSSV  F  QF S +LPLN+LI
Sbjct: 61  VRVVMAVRDMKKAEMVKERIIRENPEADIILFEIDLSSLSSVARFCSQFLSQDLPLNILI 120

Query: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH 180
           NNAG FS +   SE+ IE+TFATN+LGH+LLT++L+  M DTA+ +G+EGRI+N+SS IH
Sbjct: 121 NNAGVFSPNLEFSEEKIELTFATNFLGHYLLTEMLIEKMIDTAEKSGIEGRIINLSSVIH 180

Query: 181 GWFSGDMI---KYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNC 240
            W   D     K L  ISR     Y+ TRAYA SKLA +LH   L+++LK   ANV++N 
Sbjct: 181 NWVKPDCFSFPKLLHPISR-----YNGTRAYAQSKLATILHAKALSKQLKDRNANVTINA 240

Query: 241 VHPGIVRTRLTRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDC 300
           VHPGIV+T + R  +G  TD +F +ASKLLK+I Q AATTCYVA S     ++GKYF+DC
Sbjct: 241 VHPGIVKTGIIRAHKGLFTDSLFLIASKLLKSISQGAATTCYVALSNETKGLSGKYFADC 300

Query: 301 NEASPSKLAASPTAAARLWSASEIMVN 325
           NE + S LA     A +L + S  +++
Sbjct: 301 NETNCSDLANDEYVALKLCTQSRALIH 322

[Close]

BLAST of Csor.00g041280 vs. TAIR 10
Match: AT5G02540.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 291.6 bits (745), Expect = 8.2e-79
Identity = 163/321 (50.78%), Postives = 221/321 (68.85%), Query Frame = 0


Query: 8   LAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRGVRLILPS 67
           + G  GPSGFGS STAE+VT    +   +LTAIITG T GIG ETARVL+KRG  +++ +
Sbjct: 7   ITGRRGPSGFGSASTAEEVTQG--IDATNLTAIITGGTGGIGMETARVLSKRGAHVVIGA 66

Query: 68  RNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLINNAGKFS 127
           RN+ AAE  K  IL + +++++ ++ LDLSS+ S+  FV +F +L+LPLNLLINNAG   
Sbjct: 67  RNMGAAENAKTEILRQNANARVTLLQLDLSSIKSIKAFVREFHALHLPLNLLINNAGVMF 126

Query: 128 HDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIHGWFSGDM 187
             + +SEDGIE+ FATN++GHFLLT LL++TM +TAK +GVEGRI+NVSS  H +   + 
Sbjct: 127 CPYQLSEDGIELQFATNHIGHFLLTNLLLDTMKNTAKTSGVEGRILNVSSVAHIYTYQEG 186

Query: 188 IKYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNCVHPGIVRTRL 247
           I++    S N   +Y   RAY  SKLAN+LH +EL+R+L++   N++ N VHPG++ T L
Sbjct: 187 IQF---DSINDICSYSDKRAYGQSKLANILHANELSRQLQEEGVNITANSVHPGLILTNL 246

Query: 248 TRDREGFITDLVFFMASKLLKTIPQAAATTCYVATSPRLSHVTGKYFSDCNEASPSKLAA 307
            +     +  L FF +  L K IPQ AATTCYVA  P +  VTGKYF+DCNE +PSKLA 
Sbjct: 247 FQHTALLMRFLKFF-SFYLWKNIPQGAATTCYVALHPSVKGVTGKYFADCNEVTPSKLAR 306

Query: 308 SPTAAARLWSASEIMVNTKSK 329
             T A +LW  S  ++N+ SK
Sbjct: 307 DETLAQKLWDFSVKLINSVSK 321

[Close]

BLAST of Csor.00g041280 vs. TAIR 10
Match: AT5G50130.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 280.8 bits (717), Expect = 1.5e-75
Identity = 155/275 (56.36%), Postives = 196/275 (71.27%), Query Frame = 0


Query: 1   MLDSFYYLAGSPGPSGFGSKSTAEQVTASSPLPLPSLTAIITGATSGIGAETARVLAKRG 60
           M  +  YLAG  GP+GFGS+STAEQVT  S  P   LTAIITG TSGIGAETARVLAKRG
Sbjct: 1   MKGTLRYLAGIAGPNGFGSRSTAEQVTQHSFFPCSHLTAIITGGTSGIGAETARVLAKRG 60

Query: 61  VRLILPSRNLKAAEETKARILSECSDSQIIVMPLDLSSLSSVTNFVHQFQSLNLPLNLLI 120
           VR+++  R++K AE  K RI+ E  ++ II+  +DLSSLSSV  F  QF S +LPLN+LI
Sbjct: 61  VRVVMAVRDMKKAEMVKERIIRENPEADIILFEIDLSSLSSVARFCSQFLSQDLPLNILI 120

Query: 121 NNAGKFSHDHAISEDGIEMTFATNYLGHFLLTKLLVNTMADTAKATGVEGRIVNVSSSIH 180
           NNAG FS +   SE+ IE+TFATN+LGH+LLT++L+  M DTA+ +G+EGRI+N+SS IH
Sbjct: 121 NNAGVFSPNLEFSEEKIELTFATNFLGHYLLTEMLIEKMIDTAEKSGIEGRIINLSSVIH 180

Query: 181 GWFSGDMI---KYLGQISRNKSRNYDATRAYALSKLANVLHTHELARRLKQMEANVSVNC 240
            W   D     K L  ISR     Y+ TRAYA SKLA +LH   L+++LK   ANV++N 
Sbjct: 181 NWVKPDCFSFPKLLHPISR-----YNGTRAYAQSKLATILHAKALSKQLKDRNANVTINA 240

Query: 241 VHPGIVRTRLTRDREGFITDLVFFMASKLLKTIPQ 273
           VHPGIV+T + R  +G  TD +F +ASKLLK+I Q
Sbjct: 241 VHPGIVKTGIIRAHKGLFTDSLFLIASKLLKSISQ 270

The following BLAST results are available for this feature:

BLAST of Csor.00g041280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A078IS66	6.1e-71	47.85	Short-chain dehydrogenase TIC 32 A, chloroplastic OS=Brassica napus OX=3708 GN=T...	[more]
A0A078ISJ6	1.4e-70	47.55	Short-chain dehydrogenase TIC 32 B, chloroplastic OS=Brassica napus OX=3708 GN=T...	[more]
A2RVM0	5.0e-65	44.34	Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q6RVV4	8.3e-60	43.95	Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum OX=3888 GN=TIC3...	[more]
P59837	4.3e-40	39.58	Retinol dehydrogenase 12 OS=Bos taurus OX=9913 GN=RDH12 PE=2 SV=1	[more]

BLAST of Csor.00g041280 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605574.1	3.28e-237	100.00	Short-chain dehydrogenase TIC 32 A, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_023534459.1	1.10e-235	99.41	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucurbita pepo ...	[more]
XP_022957740.1	2.21e-235	99.41	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Cucurbita mosch...	[more]
KAG7035489.1	8.67e-235	99.70	Short-chain dehydrogenase TIC 32, chloroplastic [Cucurbita argyrosperma subsp. a...	[more]
XP_023534460.1	2.90e-233	99.11	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 [Cucurbita pepo ...	[more]

BLAST of Csor.00g041280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1D2	1.07e-235	99.41	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 OS=Cucurbita mos...	[more]
A0A6J1H032	2.83e-233	99.11	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 OS=Cucurbita mos...	[more]
A0A6J1JZY1	8.43e-233	97.63	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 OS=Cucurbita max...	[more]
A0A6J1K910	2.23e-230	97.34	short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 OS=Cucurbita max...	[more]
A0A0A0KKE2	1.00e-205	87.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G149870 PE=3 SV=1	[more]

BLAST of Csor.00g041280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24050.1	8.1e-127	69.97	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT1G64590.1	4.0e-126	71.91	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G50130.1	9.7e-88	54.43	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G02540.1	8.2e-79	50.78	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G50130.2	1.5e-75	56.36	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00080	SDRFAMILY	coord: 208..227 score: 31.71 coord: 114..125 score: 44.39 coord: 170..178 score: 54.94
IPR002347	Short-chain dehydrogenase/reductase SDR	PRINTS	PR00081	GDHRDH	coord: 164..180 score: 29.05 coord: 208..227 score: 30.81 coord: 38..55 score: 45.52 coord: 114..125 score: 42.05 coord: 231..248 score: 36.27
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 38..178 e-value: 2.0E-26 score: 92.7
None	No IPR available	GENE3D	3.40.50.720		coord: 26..328 e-value: 3.2E-73 score: 248.3
None	No IPR available	PANTHER	PTHR24320	RETINOL DEHYDROGENASE	coord: 9..328
None	No IPR available	PANTHER	PTHR24320:SF210	MITOCHONDRIAL PYRUVATE CARRIER	coord: 9..328
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 38..300

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g041280.m01	Csor.00g041280.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016491	oxidoreductase activity