Csor.00g041190 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g041190
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RING-type domain-containing protein
Location	Csor_Chr02: 5748898 .. 5751264 (+)
RNA-Seq Expression	Csor.00g041190
Synteny	Csor.00g041190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGTGCCTCAAACTCCAGCAGCCCCTCCTCATCTTTATCCCCAAGCCCTGCAACTCAAGCTTTATCAGGCCTTCATATTCTCCATTCCCATTCTCTTTTCCATTATTCTCTTTCTTCTTTTCTACTTGTTTTATCTCAAGAGAAGGGCTTCTTCTCTTTCTTCTTCTTCTTCTTCTTCTCCTCCTCCGATTCTTCCCACAACTTCTAATCGACTCACTCTCTATGTTACAACTGTAAGTGTGTTTTGGTGTTTCCTTTGCTTTAATTTTCTTTTGGGGTTGGAGAATCTATGCAAAGTTTGAAGCTTTGATGTTCATATCTCTGTTTTGGGAAGTGGGTGTTCGATTTTTGGTCTGATTTTGTCCCATTTTTGTCTCGATCTTGTTGTTCTTGATTGTGCAGGCTTGTCGAGTGGATTTGAAGGCGGATAATCCCATTGACAAACTTCCCAAGATCTTTTTCAATGAAGAGCTAAGAAGCAGGGATTCTCTGTAAGTATTATCGCCATTTTTCTGACAATCTAAACTCTGTTGGTTTTTTCAGTTCTTTTGAAAGGAAAAAGATGTTCATGAACACTGGTTTCTTTAAATGGGTATGGGATATTGAATTCGCTAAAGAAGTTAAAAGAGTAATTTTCTTTCTATAGATAGTATTTTGCAATTTAGTCCTTGCTCAATGTTAAAATTAGTTAAATTAGTTTAGAGAAGGAAAAAGATCCTATATTGTATCAAAGTTTATTATTTTAAGGGACTAAATTGTAAATTTTAAAAGAGTAGAGGCTAAAGTACATTTATCCACTATTAACGATGAGAGGAACCACCGCCCAATAGTACTTTTATGAAAGAGCTTAATAGATACATTGAGACATCTTTATTAGAGCAGCATAAGATTAACACAATCGTCGTCTTGTCCGGTCTAGCTTCAATGTGCATTATGAAAAGGACAAATATATATATATATATATATATATATATAGAACAGTGAAGAGATAGAGGTGGAAGGTTTAGTGACTGAAATAGGGAGCACACATAAGAAACAAAATAAAGGTAAAAGTGAAGCTCATCTTTTTCAATTTCTTTGATTATAATTTTCTTTTCTTTTCTTTTCTTTCCCTTTAAGGGATTGGAATCTCTTATAACATCCGCTCTTTAATTTGTCAAAAGTGGCTTTTATATTTTTGGTTCTATAGCTGCTTTTGTTTTTGTTTTTGATTTCTTTTATTGAAAGGTGTTATTTGTAGAACCTTAGGCCGACAAAATTGTTGTTGAAGATGAATGGCATGTTTCATTTTTCCTTTTTCTTCCAATTTCACACTATTCTTTATTCTTTTATTACTTTAATACATAGTTCGAAAAAAAATAATTGATTAACCTTCACAAGAATTGATCTTCTTCCGTTGCGAGCACGACAAATAGAAATGATAAAACTCTTGACTAAGTATAACTCTACCTGCTAAGTATACAGATGAATCTCCATTATAGGTCTATAAGCTCAAATCAAACGACCCAAGCCTACCGCCAGTAGATATTGTCCTCTTTAGGCTTACCCTTCTGAACTTCCTCTCAAGGTTTTAAAACGCTGCTAGGGAGAGGTTTCCACACCCTTATAAAAAATGTTTCGTTTTTCTCCCTAACCGATGTGGGATTTTATGAGATCTCATATCGACGGGAGAGAGGAATAAGTGTGAGACGCTGGGTCTTGAAGGGGATGGATTTTTCCACATCGGTGGGAGAGAATGAAACATTCTGTATAAGGACGTGAAAATCTTTCTCTAACATATATATTTTAAAACTTTGAGGGAAAGTCTAAAAGAAAAAACTAAAAAAAGATAATATCTACTAGGAGTAGACTTTGGCTGTTACAATTTTATCTTGCTCTTCGATCTGTGATAATCTCCGATTAGGGTTGAGAGAAAGATTCGGACTTTAAGTCGAGATCATACTGTTCTTTAAGATATGTGGGGTTGCAAATCAAAATCAACACTAACTCAAAAGAAAAAGCAATAACTATATTATCTATTTAATATCAGGTGCTGCGTCTGCTTGGGAGAATTCGAGATAAAAGAGGAATTGTTGCAAGTCCCATCATGCAAACATGTGTTTCATATTGACTGCATGAATCTCTGGCTCGCCTCCAACTCAACTTGCCCTCTTTGTAGATGCTCAGTTATCCCAACAACCCGATGTTCTGACCCGCCCGTTCTTGTGCCGCCACAACTAACGCCGCCCCCACCTCCGCCTCCTCCACTGGCTGCCTCATTGGAACTTCCCCTGGCTTCTAACCAGACTGCAGAGACGGTATCATATTCACTCCAACATCCGCAGCTGCAACAACAGATAGGATCAAGTCAGAGTATATGCTAA

mRNA sequence

ATGGGTGTGCCTCAAACTCCAGCAGCCCCTCCTCATCTTTATCCCCAAGCCCTGCAACTCAAGCTTTATCAGGCCTTCATATTCTCCATTCCCATTCTCTTTTCCATTATTCTCTTTCTTCTTTTCTACTTGTTTTATCTCAAGAGAAGGGCTTCTTCTCTTTCTTCTTCTTCTTCTTCTTCTCCTCCTCCGATTCTTCCCACAACTTCTAATCGACTCACTCTCTATGTTACAACTGCTTGTCGAGTGGATTTGAAGGCGGATAATCCCATTGACAAACTTCCCAAGATCTTTTTCAATGAAGAGCTAAGAAGCAGGGATTCTCTGTGCTGCGTCTGCTTGGGAGAATTCGAGATAAAAGAGGAATTGTTGCAAGTCCCATCATGCAAACATGTGTTTCATATTGACTGCATGAATCTCTGGCTCGCCTCCAACTCAACTTGCCCTCTTTGTAGATGCTCAGTTATCCCAACAACCCGATGTTCTGACCCGCCCGTTCTTGTGCCGCCACAACTAACGCCGCCCCCACCTCCGCCTCCTCCACTGGCTGCCTCATTGGAACTTCCCCTGGCTTCTAACCAGACTGCAGAGACGGTATCATATTCACTCCAACATCCGCAGCTGCAACAACAGATAGGATCAAGTCAGAGTATATGCTAA

Coding sequence (CDS)

ATGGGTGTGCCTCAAACTCCAGCAGCCCCTCCTCATCTTTATCCCCAAGCCCTGCAACTCAAGCTTTATCAGGCCTTCATATTCTCCATTCCCATTCTCTTTTCCATTATTCTCTTTCTTCTTTTCTACTTGTTTTATCTCAAGAGAAGGGCTTCTTCTCTTTCTTCTTCTTCTTCTTCTTCTCCTCCTCCGATTCTTCCCACAACTTCTAATCGACTCACTCTCTATGTTACAACTGCTTGTCGAGTGGATTTGAAGGCGGATAATCCCATTGACAAACTTCCCAAGATCTTTTTCAATGAAGAGCTAAGAAGCAGGGATTCTCTGTGCTGCGTCTGCTTGGGAGAATTCGAGATAAAAGAGGAATTGTTGCAAGTCCCATCATGCAAACATGTGTTTCATATTGACTGCATGAATCTCTGGCTCGCCTCCAACTCAACTTGCCCTCTTTGTAGATGCTCAGTTATCCCAACAACCCGATGTTCTGACCCGCCCGTTCTTGTGCCGCCACAACTAACGCCGCCCCCACCTCCGCCTCCTCCACTGGCTGCCTCATTGGAACTTCCCCTGGCTTCTAACCAGACTGCAGAGACGGTATCATATTCACTCCAACATCCGCAGCTGCAACAACAGATAGGATCAAGTCAGAGTATATGCTAA

Protein sequence

MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPPILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPPPPLAASLELPLASNQTAETVSYSLQHPQLQQQIGSSQSIC

Homology

[Close]

BLAST of Csor.00g041190 vs. ExPASy Swiss-Prot
Match: Q84TF5 (Probable E3 ubiquitin-protein ligase RHA4A OS=Arabidopsis thaliana OX=3702 GN=RHA4A PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-48
Identity = 106/161 (65.84%), Postives = 130/161 (80.75%), Query Frame = 0


Query: 4   PQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPP 63
           PQ+P   PHLYPQA+QLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSS S    P
Sbjct: 4   PQSPIT-PHLYPQAIQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPS----P 63

Query: 64  PILPTTSNRLT-LYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIKEE 123
            ILP +S+  T  ++ + C +D+K +   DKL  + FNEEL +RDSLCCVCLGEFE+KEE
Sbjct: 64  MILPVSSSHQTSSHLPSVCLLDVKVELK-DKLHVVLFNEELGTRDSLCCVCLGEFELKEE 123

Query: 124 LLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSV-IPTTRCS 163
           L+++P CKH+FH+DC++LWL S++TCPLCR SV I +T+ S
Sbjct: 124 LVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSSVSISSTKTS 158

[Close]

BLAST of Csor.00g041190 vs. ExPASy Swiss-Prot
Match: Q570X5 (RING-H2 finger protein ATL58 OS=Arabidopsis thaliana OX=3702 GN=ATL58 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.2e-24
Identity = 68/160 (42.50%), Postives = 97/160 (60.62%), Query Frame = 0


Query: 19  QLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPPILPTTS-NRLTLYV 78
           +LKLYQAFIFS+PI F+ I+  LFYL YL+R +S LSS    +    +P  S + + L +
Sbjct: 19  ELKLYQAFIFSVPICFTFIILFLFYLIYLRRSSSDLSSLGMRT--TFIPGNSLSTIELGL 78

Query: 79  TTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDC 138
           +   R         + LP + F E     DS C VCLG+++  ++L Q+P CKH FH+DC
Sbjct: 79  SKELR---------EMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDC 138

Query: 139 MNLWLASNSTCPLCRCSVIP--TTRCSDPPVLVPPQLTPP 176
           ++LWL S++TCPLCR ++IP  + +  D PV   P L  P
Sbjct: 139 IDLWLTSHTTCPLCRLALIPSRSRQSQDDPV---PSLVSP 164

[Close]

BLAST of Csor.00g041190 vs. ExPASy Swiss-Prot
Match: Q9SN28 (RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 9.0e-23
Identity = 63/157 (40.13%), Postives = 97/157 (61.78%), Query Frame = 0


Query: 3   VPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLS--SSSSS 62
           +P+T A  P    ++ +LKLYQAFIFS+PI F+ I+  + Y+ YL+R +++    SS   
Sbjct: 11  IPETYA--PSNSTESEKLKLYQAFIFSVPICFTFIVLFVLYVIYLRRNSTTNVDWSSLGM 70

Query: 63  SPPPILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIK 122
                +PT +N  T        + L  D   + LP + + E    +DS C VCLG+++ +
Sbjct: 71  RGGTFVPTNNNLST------AELGLSKDIR-EMLPVVIYKESFIVKDSQCSVCLGDYQAE 130

Query: 123 EELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIP 158
           E+L Q+PSC H FH++C++LWL S++TCPLCR S+IP
Sbjct: 131 EKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIP 158

[Close]

BLAST of Csor.00g041190 vs. ExPASy Swiss-Prot
Match: Q9SN27 (E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.8e-15
Identity = 49/132 (37.12%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 26  FIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPPILPTTSNRLTLYVTTACRVDL 85
           FI  +PI   +I+ L+ Y+     R +S ++   SS    +PT +N  T        + L
Sbjct: 24  FIVCVPICVILIVLLVLYIM----RRNSNTNVDWSSLGGFVPTNNNLST------AELGL 83

Query: 86  KADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNLWLASN 145
             D   + LP + + E     D+ C VCLG+++ +E+L Q+PSC H FH++C++LWL S+
Sbjct: 84  SKDIR-EMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSH 143

Query: 146 STCPLCRCSVIP 158
           +TCPLCR S+IP
Sbjct: 144 TTCPLCRLSLIP 144

[Close]

BLAST of Csor.00g041190 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.5e-12
Identity = 49/134 (36.57%), Postives = 70/134 (52.24%), Query Frame = 0


Query: 27  IFSIPILFSIILFL-----LFYLFYLKRRASSLSSS--SSSSPPPILPTTSNRLTLYVTT 86
           I  I +L S+I F+     L   +YLK++ S+LSSS   S+  P    + + +  L    
Sbjct: 53  ILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLF 112

Query: 87  ACRVDLKADNPIDKLPKIFFNEELRSRDSL-CCVCLGEFEIKEELLQVPSCKHVFHIDCM 146
                      ID LP   + E   +++   C VCL EF   ++L  +P+C H FHIDC+
Sbjct: 113 HLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCI 172

Query: 147 NLWLASNSTCPLCR 153
           + WL SNSTCPLCR
Sbjct: 173 DTWLLSNSTCPLCR 186

[Close]

BLAST of Csor.00g041190 vs. NCBI nr
Match: KAG6605583.1 (putative E3 ubiquitin-protein ligase RHA4A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 428 bits (1101), Expect = 4.11e-151
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60
           MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS
Sbjct: 1   MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60

Query: 61  SPPPILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIK 120
           SPPPILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIK
Sbjct: 61  SPPPILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIK 120

Query: 121 EELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPPP 180
           EELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPPP
Sbjct: 121 EELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPPP 180

Query: 181 PLAASLELPLASNQTAETVSYSLQHPQLQQQIGSSQSIC 219
           PLAASLELPLASNQTAETVSYSLQHPQLQQQIGSSQSIC
Sbjct: 181 PLAASLELPLASNQTAETVSYSLQHPQLQQQIGSSQSIC 219

[Close]

BLAST of Csor.00g041190 vs. NCBI nr
Match: XP_022958025.1 (probable E3 ubiquitin-protein ligase RHA4A [Cucurbita moschata])

HSP 1 Score: 425 bits (1092), Expect = 9.67e-150
Identity = 217/219 (99.09%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60
           MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS
Sbjct: 1   MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60

Query: 61  SPPPILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIK 120
           SPPPILPTTSNRLTLYVTTACRVDLKADNP+DKLPKIFFNEELRSRDSLCCVCLGEFEIK
Sbjct: 61  SPPPILPTTSNRLTLYVTTACRVDLKADNPMDKLPKIFFNEELRSRDSLCCVCLGEFEIK 120

Query: 121 EELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPPP 180
           EELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPPP
Sbjct: 121 EELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPPP 180

Query: 181 PLAASLELPLASNQTAETVSYSLQHPQLQQQIGSSQSIC 219
           PLAASLELPLASNQTAE VSYSLQHPQLQQQIGSSQSIC
Sbjct: 181 PLAASLELPLASNQTAEMVSYSLQHPQLQQQIGSSQSIC 219

[Close]

BLAST of Csor.00g041190 vs. NCBI nr
Match: XP_023534491.1 (probable E3 ubiquitin-protein ligase RHA4A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 421 bits (1083), Expect = 2.36e-148
Identity = 218/220 (99.09%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 1   MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60
           MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS
Sbjct: 1   MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60

Query: 61  S-PPPILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEI 120
           S PPPILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEI
Sbjct: 61  SSPPPILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEI 120

Query: 121 KEELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPP 180
           KEELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPP
Sbjct: 121 KEELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPP 180

Query: 181 PPLAASLELPLASNQTAETVSYSLQHPQLQQQIGSSQSIC 219
           PPLAASLELPLASNQTAE VSYSLQHPQLQQQIGSSQSIC
Sbjct: 181 PPLAASLELPLASNQTAEMVSYSLQHPQLQQQIGSSQSIC 220

[Close]

BLAST of Csor.00g041190 vs. NCBI nr
Match: KAG7035496.1 (putative E3 ubiquitin-protein ligase RHA4A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 420 bits (1079), Expect = 2.73e-147
Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60
           MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS
Sbjct: 1   MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60

Query: 61  SPPPILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIK 120
           SPPPILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIK
Sbjct: 61  SPPPILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIK 120

Query: 121 EELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPPP 180
           EELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPPP
Sbjct: 121 EELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPPP 180

Query: 181 PLAASLELPLASNQTAETVSYSLQHPQLQQQIGSSQS 217
           PLAASLELPLASNQTAE VSYSLQHPQLQQQIGSSQ+
Sbjct: 181 PLAASLELPLASNQTAEMVSYSLQHPQLQQQIGSSQN 217

[Close]

BLAST of Csor.00g041190 vs. NCBI nr
Match: XP_022995439.1 (probable E3 ubiquitin-protein ligase RHA4A [Cucurbita maxima])

HSP 1 Score: 408 bits (1049), Expect = 3.35e-143
Identity = 214/220 (97.27%), Postives = 215/220 (97.73%), Query Frame = 0


Query: 1   MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60
           MGVPQT AAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS
Sbjct: 1   MGVPQTSAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60

Query: 61  SPPP-ILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEI 120
           SPPP ILPTTSNRLTLYVTTACRVDLKA+NPIDKLPKIFFNEELRSRDSLCCVCLGEFEI
Sbjct: 61  SPPPPILPTTSNRLTLYVTTACRVDLKANNPIDKLPKIFFNEELRSRDSLCCVCLGEFEI 120

Query: 121 KEELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPP 180
           KEELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPP  PP
Sbjct: 121 KEELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPP--PP 180

Query: 181 PPLAASLELPLASNQTAETVSYSLQHPQLQQQIGSSQSIC 219
           PPLAASLELPLASNQTAE VSYSLQHPQLQQQIGSSQSIC
Sbjct: 181 PPLAASLELPLASNQTAEMVSYSLQHPQLQQQIGSSQSIC 218

[Close]

BLAST of Csor.00g041190 vs. ExPASy TrEMBL
Match: A0A6J1H2A4 (probable E3 ubiquitin-protein ligase RHA4A OS=Cucurbita moschata OX=3662 GN=LOC111459379 PE=4 SV=1)

HSP 1 Score: 425 bits (1092), Expect = 4.68e-150
Identity = 217/219 (99.09%), Postives = 218/219 (99.54%), Query Frame = 0


Query: 1   MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60
           MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS
Sbjct: 1   MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60

Query: 61  SPPPILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIK 120
           SPPPILPTTSNRLTLYVTTACRVDLKADNP+DKLPKIFFNEELRSRDSLCCVCLGEFEIK
Sbjct: 61  SPPPILPTTSNRLTLYVTTACRVDLKADNPMDKLPKIFFNEELRSRDSLCCVCLGEFEIK 120

Query: 121 EELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPPP 180
           EELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPPP
Sbjct: 121 EELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPPP 180

Query: 181 PLAASLELPLASNQTAETVSYSLQHPQLQQQIGSSQSIC 219
           PLAASLELPLASNQTAE VSYSLQHPQLQQQIGSSQSIC
Sbjct: 181 PLAASLELPLASNQTAEMVSYSLQHPQLQQQIGSSQSIC 219

[Close]

BLAST of Csor.00g041190 vs. ExPASy TrEMBL
Match: A0A6J1K5R3 (probable E3 ubiquitin-protein ligase RHA4A OS=Cucurbita maxima OX=3661 GN=LOC111490976 PE=4 SV=1)

HSP 1 Score: 408 bits (1049), Expect = 1.62e-143
Identity = 214/220 (97.27%), Postives = 215/220 (97.73%), Query Frame = 0


Query: 1   MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60
           MGVPQT AAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS
Sbjct: 1   MGVPQTSAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60

Query: 61  SPPP-ILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEI 120
           SPPP ILPTTSNRLTLYVTTACRVDLKA+NPIDKLPKIFFNEELRSRDSLCCVCLGEFEI
Sbjct: 61  SPPPPILPTTSNRLTLYVTTACRVDLKANNPIDKLPKIFFNEELRSRDSLCCVCLGEFEI 120

Query: 121 KEELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPP 180
           KEELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPP  PP
Sbjct: 121 KEELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPP--PP 180

Query: 181 PPLAASLELPLASNQTAETVSYSLQHPQLQQQIGSSQSIC 219
           PPLAASLELPLASNQTAE VSYSLQHPQLQQQIGSSQSIC
Sbjct: 181 PPLAASLELPLASNQTAEMVSYSLQHPQLQQQIGSSQSIC 218

[Close]

BLAST of Csor.00g041190 vs. ExPASy TrEMBL
Match: A0A6J1EM64 (probable E3 ubiquitin-protein ligase RHA4A OS=Cucurbita moschata OX=3662 GN=LOC111435669 PE=4 SV=1)

HSP 1 Score: 350 bits (899), Expect = 1.02e-120
Identity = 192/222 (86.49%), Postives = 197/222 (88.74%), Query Frame = 0


Query: 1   MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60
           MG PQTPA PPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS
Sbjct: 1   MGQPQTPA-PPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60

Query: 61  SP--PPILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFE 120
           S   PPILPTTSN LTLYVTTAC+VDLKADNP+DKLPKI FNEELR+RDSLCCVCLGEFE
Sbjct: 61  SSSFPPILPTTSNTLTLYVTTACQVDLKADNPVDKLPKILFNEELRTRDSLCCVCLGEFE 120

Query: 121 IKEELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPP 180
           IKEELLQVPSCKHVFHIDCMN WL SNSTCPLCRCSVIPTTRC DPPV+V    +PPPPP
Sbjct: 121 IKEELLQVPSCKHVFHIDCMNHWLTSNSTCPLCRCSVIPTTRCFDPPVVV----SPPPPP 180

Query: 181 PPPLAASLELPLASNQTAETVSYSLQHPQLQQQI-GSSQSIC 219
           P   A S ELPL SNQTAE  SYSL HPQLQQQ  GSSQSIC
Sbjct: 181 P---AGSSELPLTSNQTAEMRSYSLLHPQLQQQQEGSSQSIC 214

[Close]

BLAST of Csor.00g041190 vs. ExPASy TrEMBL
Match: A0A6J1I2V6 (probable E3 ubiquitin-protein ligase RHA4A OS=Cucurbita maxima OX=3661 GN=LOC111469090 PE=4 SV=1)

HSP 1 Score: 340 bits (871), Expect = 1.88e-116
Identity = 187/222 (84.23%), Postives = 192/222 (86.49%), Query Frame = 0


Query: 1   MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60
           MG PQTPA PPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS
Sbjct: 1   MGQPQTPA-PPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60

Query: 61  SP--PPILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFE 120
           S   PPILPTTSN LTLYVTTAC+VDLKADNP+DKLPKI FNEELR+RDSLCCVCLGEFE
Sbjct: 61  SSSFPPILPTTSNTLTLYVTTACQVDLKADNPVDKLPKILFNEELRTRDSLCCVCLGEFE 120

Query: 121 IKEELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPP 180
           IKEELLQVPSCKHVFHIDCMN WL SNSTCPLCRCSVIPTTRC D PV+V P       P
Sbjct: 121 IKEELLQVPSCKHVFHIDCMNHWLTSNSTCPLCRCSVIPTTRCFDLPVVVSP-------P 180

Query: 181 PPPLAASLELPLASNQTAETVSYSLQHPQLQQQI-GSSQSIC 219
           PPP A S E P  S+QTAE  SYSL HPQLQQQ  GSSQSIC
Sbjct: 181 PPPSAGSSEPPPTSDQTAEMRSYSLLHPQLQQQQEGSSQSIC 214

[Close]

BLAST of Csor.00g041190 vs. ExPASy TrEMBL
Match: A0A6J1DWP0 (probable E3 ubiquitin-protein ligase RHA4A OS=Momordica charantia OX=3673 GN=LOC111023829 PE=4 SV=1)

HSP 1 Score: 337 bits (864), Expect = 1.77e-115
Identity = 181/219 (82.65%), Postives = 188/219 (85.84%), Query Frame = 0


Query: 1   MGVPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSS 60
           MG+PQTPA PPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLS SSSS
Sbjct: 1   MGLPQTPA-PPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSFSSSS 60

Query: 61  SPPPILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIK 120
           SPP ILPT+SN LTLYVTTAC+VD KADNPI+KLPKI FNEELR+RDSLCCVCLGEFEIK
Sbjct: 61  SPP-ILPTSSNALTLYVTTACQVDSKADNPIEKLPKILFNEELRARDSLCCVCLGEFEIK 120

Query: 121 EELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIPTTRCSDPPVLVPPQLTPPPPPPP 180
           EELLQVPSCKHVFHIDCMN WL +NSTCPLCRCSVIP  RC DPPV           P P
Sbjct: 121 EELLQVPSCKHVFHIDCMNHWLTTNSTCPLCRCSVIPPIRCPDPPVAA---------PSP 180

Query: 181 PLAASLELPLASNQTAETVSYSLQHPQLQQQIGSSQSIC 219
            L    ELPL SNQTAE VSYSL+HPQLQQQ GSSQSIC
Sbjct: 181 TLPLPSELPLTSNQTAEMVSYSLRHPQLQQQEGSSQSIC 208

[Close]

BLAST of Csor.00g041190 vs. TAIR 10
Match: AT4G24015.1 (RING/U-box superfamily protein )

HSP 1 Score: 194.5 bits (493), Expect = 8.9e-50
Identity = 106/161 (65.84%), Postives = 130/161 (80.75%), Query Frame = 0


Query: 4   PQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPP 63
           PQ+P   PHLYPQA+QLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSS S    P
Sbjct: 4   PQSPIT-PHLYPQAIQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSPS----P 63

Query: 64  PILPTTSNRLT-LYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIKEE 123
            ILP +S+  T  ++ + C +D+K +   DKL  + FNEEL +RDSLCCVCLGEFE+KEE
Sbjct: 64  MILPVSSSHQTSSHLPSVCLLDVKVELK-DKLHVVLFNEELGTRDSLCCVCLGEFELKEE 123

Query: 124 LLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSV-IPTTRCS 163
           L+++P CKH+FH+DC++LWL S++TCPLCR SV I +T+ S
Sbjct: 124 LVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSSVSISSTKTS 158

[Close]

BLAST of Csor.00g041190 vs. TAIR 10
Match: AT1G33480.1 (RING/U-box superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 4.4e-25
Identity = 68/160 (42.50%), Postives = 97/160 (60.62%), Query Frame = 0


Query: 19  QLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPPILPTTS-NRLTLYV 78
           +LKLYQAFIFS+PI F+ I+  LFYL YL+R +S LSS    +    +P  S + + L +
Sbjct: 19  ELKLYQAFIFSVPICFTFIILFLFYLIYLRRSSSDLSSLGMRT--TFIPGNSLSTIELGL 78

Query: 79  TTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDC 138
           +   R         + LP + F E     DS C VCLG+++  ++L Q+P CKH FH+DC
Sbjct: 79  SKELR---------EMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDC 138

Query: 139 MNLWLASNSTCPLCRCSVIP--TTRCSDPPVLVPPQLTPP 176
           ++LWL S++TCPLCR ++IP  + +  D PV   P L  P
Sbjct: 139 IDLWLTSHTTCPLCRLALIPSRSRQSQDDPV---PSLVSP 164

[Close]

BLAST of Csor.00g041190 vs. TAIR 10
Match: AT4G10150.1 (RING/U-box superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 6.4e-24
Identity = 63/157 (40.13%), Postives = 97/157 (61.78%), Query Frame = 0


Query: 3   VPQTPAAPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLS--SSSSS 62
           +P+T A  P    ++ +LKLYQAFIFS+PI F+ I+  + Y+ YL+R +++    SS   
Sbjct: 11  IPETYA--PSNSTESEKLKLYQAFIFSVPICFTFIVLFVLYVIYLRRNSTTNVDWSSLGM 70

Query: 63  SPPPILPTTSNRLTLYVTTACRVDLKADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIK 122
                +PT +N  T        + L  D   + LP + + E    +DS C VCLG+++ +
Sbjct: 71  RGGTFVPTNNNLST------AELGLSKDIR-EMLPVVIYKESFIVKDSQCSVCLGDYQAE 130

Query: 123 EELLQVPSCKHVFHIDCMNLWLASNSTCPLCRCSVIP 158
           E+L Q+PSC H FH++C++LWL S++TCPLCR S+IP
Sbjct: 131 EKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIP 158

[Close]

BLAST of Csor.00g041190 vs. TAIR 10
Match: AT4G10160.1 (RING/U-box superfamily protein )

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-16
Identity = 49/132 (37.12%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 26  FIFSIPILFSIILFLLFYLFYLKRRASSLSSSSSSSPPPILPTTSNRLTLYVTTACRVDL 85
           FI  +PI   +I+ L+ Y+     R +S ++   SS    +PT +N  T        + L
Sbjct: 24  FIVCVPICVILIVLLVLYIM----RRNSNTNVDWSSLGGFVPTNNNLST------AELGL 83

Query: 86  KADNPIDKLPKIFFNEELRSRDSLCCVCLGEFEIKEELLQVPSCKHVFHIDCMNLWLASN 145
             D   + LP + + E     D+ C VCLG+++ +E+L Q+PSC H FH++C++LWL S+
Sbjct: 84  SKDIR-EMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSH 143

Query: 146 STCPLCRCSVIP 158
           +TCPLCR S+IP
Sbjct: 144 TTCPLCRLSLIP 144

[Close]

BLAST of Csor.00g041190 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 3.9e-13
Identity = 49/134 (36.57%), Postives = 70/134 (52.24%), Query Frame = 0


Query: 27  IFSIPILFSIILFL-----LFYLFYLKRRASSLSSS--SSSSPPPILPTTSNRLTLYVTT 86
           I  I +L S+I F+     L   +YLK++ S+LSSS   S+  P    + + +  L    
Sbjct: 53  ILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLF 112

Query: 87  ACRVDLKADNPIDKLPKIFFNEELRSRDSL-CCVCLGEFEIKEELLQVPSCKHVFHIDCM 146
                      ID LP   + E   +++   C VCL EF   ++L  +P+C H FHIDC+
Sbjct: 113 HLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCI 172

Query: 147 NLWLASNSTCPLCR 153
           + WL SNSTCPLCR
Sbjct: 173 DTWLLSNSTCPLCR 186

The following BLAST results are available for this feature:

BLAST of Csor.00g041190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84TF5	1.2e-48	65.84	Probable E3 ubiquitin-protein ligase RHA4A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q570X5	6.2e-24	42.50	RING-H2 finger protein ATL58 OS=Arabidopsis thaliana OX=3702 GN=ATL58 PE=2 SV=1	[more]
Q9SN28	9.0e-23	40.13	RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1	[more]
Q9SN27	1.8e-15	37.12	E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 ...	[more]
Q8GW38	5.5e-12	36.57	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1	[more]

BLAST of Csor.00g041190 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605583.1	4.11e-151	100.00	putative E3 ubiquitin-protein ligase RHA4A, partial [Cucurbita argyrosperma subs...	[more]
XP_022958025.1	9.67e-150	99.09	probable E3 ubiquitin-protein ligase RHA4A [Cucurbita moschata]	[more]
XP_023534491.1	2.36e-148	99.09	probable E3 ubiquitin-protein ligase RHA4A [Cucurbita pepo subsp. pepo]	[more]
KAG7035496.1	2.73e-147	99.08	putative E3 ubiquitin-protein ligase RHA4A, partial [Cucurbita argyrosperma subs...	[more]
XP_022995439.1	3.35e-143	97.27	probable E3 ubiquitin-protein ligase RHA4A [Cucurbita maxima]	[more]

BLAST of Csor.00g041190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2A4	4.68e-150	99.09	probable E3 ubiquitin-protein ligase RHA4A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1K5R3	1.62e-143	97.27	probable E3 ubiquitin-protein ligase RHA4A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1EM64	1.02e-120	86.49	probable E3 ubiquitin-protein ligase RHA4A OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1I2V6	1.88e-116	84.23	probable E3 ubiquitin-protein ligase RHA4A OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1DWP0	1.77e-115	82.65	probable E3 ubiquitin-protein ligase RHA4A OS=Momordica charantia OX=3673 GN=LOC...	[more]

BLAST of Csor.00g041190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24015.1	8.9e-50	65.84	RING/U-box superfamily protein	[more]
AT1G33480.1	4.4e-25	42.50	RING/U-box superfamily protein	[more]
AT4G10150.1	6.4e-24	40.13	RING/U-box superfamily protein	[more]
AT4G10160.1	1.3e-16	37.12	RING/U-box superfamily protein	[more]
AT1G23980.1	3.9e-13	36.57	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 110..151 e-value: 5.9E-4 score: 29.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 110..152 e-value: 1.3E-11 score: 44.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 110..152 score: 11.751628
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 79..157 e-value: 1.1E-16 score: 62.3
None	No IPR available	PANTHER	PTHR22765	RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING	coord: 4..170
None	No IPR available	PANTHER	PTHR22765:SF187	E3 UBIQUITIN-PROTEIN LIGASE RHA4A-RELATED	coord: 4..170
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 90..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g041190.m01	Csor.00g041190.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0061630	ubiquitin protein ligase activity