Csor.00g041160 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g041160
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr02: 5758027 .. 5758575 (-)
RNA-Seq ExpressionCsor.00g041160
SyntenyCsor.00g041160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGATGCCGTACTATTTGCTCCGTCATATAACGTCGTCAGTTACCCATTTCTCCGTCTCTCCTTCTTTCATTTCTCACTCCTTTCCGTCTCTCACGCCGGCATCTTAGTCATCTTCTCCGGTCACAATCTAACCCTGGTTGAGTCAAGAGTCCACTGAAGGCTCCCAGTTCGGGCAGCTACAGAGCTAGTTCCCGTATAATAGGACGCGCGCCAAGCCGTTTTGCGATTCTTTCCTGTGACGGCGTTTTCTCCCCTGTTGAGCGACAGAGAGGATTAGCGGTTGATTTTCGAGCGGTTTTTATCACAGGATCAGTGACGAAGGTGTTTCAGGTTCGTGTGGATGGTTTAATTGCGTTATGCTTACTCTTTTCTGTGAGTTCTTGCGTTCAGTCTTTGACTGAGCGTCGTGGAATGGGACTTGTCTCTCTATCTCTGTATTTCCCCTTGTGAAGGAAGGAATTGTAGTGTTTGTCTTTGTCTTTGTGGCTCATGTTTGGTTCTGATCGGTTCAGGGGCGTTGGGAGATTTGTTTTGAGTTGCTTTGA

mRNA sequence

ATGCCGATGCCGTACTATTTGCTCCGTCATATAACGTCGTCAGTTACCCATTTCTCCAGTCCACTGAAGGCTCCCAGTTCGGGCAGCTACAGAGCTAGTTCCCGTATAATAGGACGCGCGCCAAGCCGTTTTGCGATTCTTTCCTGTGACGGCGTTTTCTCCCCTGTTGAGCGACAGAGAGGATTAGCGGTTGATTTTCGAGCGGTTTTTATCACAGGATCAGTGACGAAGGTGTTTCAGGGGCGTTGGGAGATTTGTTTTGAGTTGCTTTGA

Coding sequence (CDS)

ATGCCGATGCCGTACTATTTGCTCCGTCATATAACGTCGTCAGTTACCCATTTCTCCAGTCCACTGAAGGCTCCCAGTTCGGGCAGCTACAGAGCTAGTTCCCGTATAATAGGACGCGCGCCAAGCCGTTTTGCGATTCTTTCCTGTGACGGCGTTTTCTCCCCTGTTGAGCGACAGAGAGGATTAGCGGTTGATTTTCGAGCGGTTTTTATCACAGGATCAGTGACGAAGGTGTTTCAGGGGCGTTGGGAGATTTGTTTTGAGTTGCTTTGA

Protein sequence

MPMPYYLLRHITSSVTHFSSPLKAPSSGSYRASSRIIGRAPSRFAILSCDGVFSPVERQRGLAVDFRAVFITGSVTKVFQGRWEICFELL
Homology
[Close]
BLAST of Csor.00g041160 vs. NCBI nr
Match: KAG6605586.1 (hypothetical protein SDJN03_02903, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 184 bits (468), Expect = 8.81e-59
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 1  MPMPYYLLRHITSSVTHFSSPLKAPSSGSYRASSRIIGRAPSRFAILSCDGVFSPVERQR 60
          MPMPYYLLRHITSSVTHFSSPLKAPSSGSYRASSRIIGRAPSRFAILSCDGVFSPVERQR
Sbjct: 1  MPMPYYLLRHITSSVTHFSSPLKAPSSGSYRASSRIIGRAPSRFAILSCDGVFSPVERQR 60

Query: 61 GLAVDFRAVFITGSVTKVFQGRWEICFELL 90
          GLAVDFRAVFITGSVTKVFQGRWEICFELL
Sbjct: 61 GLAVDFRAVFITGSVTKVFQGRWEICFELL 90

The following BLAST results are available for this feature:
BLAST of Csor.00g041160 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g041160 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6605586.18.81e-59100.00hypothetical protein SDJN03_02903, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g041160 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g041160 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g041160.m01Csor.00g041160.m01mRNA