Csor.00g040680 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g040680
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	PLAT domain-containing protein
Location	Csor_Chr02: 6073213 .. 6074528 (-)
RNA-Seq Expression	Csor.00g040680
Synteny	Csor.00g040680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCTCGTTGTCTCTTCTTTTCCCTCATCTTCATCGCTCTTTTCCTCTCTGCATTGGCTCGCAACACTAAAGTAAGTTTCATCTCTTTTTATACATTTCTTCCTTCTTACTTGATCTTCCTACTTTCATCATCGAAGCCGTTTTGATGATCTTCACTTAGTTTGTTATTTACTCGTGATTTACTTTTGACTGCGTTTGTTTTGATCTTGTTGATCGATCTCCTTTAGTAGTCGAGTTGTTGTAATGTTTGAGATTGATTATTGATTTTTTCTGACAGTCGAACTGATTCACAGAATGTAGTTTACAAAATACAGGATAATGATCCGATTTCTGCGTTGATGATTGTCGATTGTATTTTGTAATAACGAAGTGAATGATTGATTCACATTTGAGATCGGTTTTGAGTTATGACAGGGAAACTAGTTATAGAAATGCTGTTTAGAAAATGCATTCGATTTCTCAGTTATTGATGATAGTCGATTGTATCTGTAAGAAAGGACTAAATGAATGTTCACATTTCAGATTGATTATGAGTTACGTCAGTTCTACGAATTACAAAACTCCGTTTAGAAATGTAATGATGATTGAAGAATGATTCACATTTCAGTTCAATTATGGCTTATGAGTCATGACAAGTTAATTAATTATTGAAATGTTGTATTAGGCAAGATAATGCTCCAATTTCTGCGTTTATGATTCACGATGGTCGATTTTATGTGCGAACTGAATGAATGACTTGATGCAAATTAGTTTTAAATTGATATAAATCGCCGTAATTTCTGAGCGGATTGTGGTCCGTGGAAAATGATGGGAGTGTTTTCTGGTGCAGGAAAAATGCGTGTACACATTCTACGTGAAGACAGGTTCAGTACTGAAGGGAGGAACGGACGCCATGATCAGCGTCACAATCAGCGACGCAAATGGCCAATCGGTGGAGATTGCAGATCTGGAATCTTGGGGGCTGATGGAAAAAAACCATGACTATTTTGAACGAGACAATGTCGACATATTCAGTGGGCGGGGCCCGTGCATCGAAGCGCCGTTGTGTCGATTGAACCTGACCTCCGACGGATCAGGCGCCCACCACGGCTGGTTTTGCGACTATCTGGAGGTGACTTCGACTGGGCCACACAGATCCTGCTCCCAGACGGCGTTTTATGTGGACCAGTGGCTGGCCACCGACGCGCCGCCATTTCAGCTGACGACGATTCTGGACGGGTGCGATGATTGGATCAAGGGACATGGAGAGTCGAGGCATACGAGTAGCGGAAAGCTGGTGGTCTCCGGTTCCAAAGGATCTGCTTCGTTGTAA

mRNA sequence

ATGGCGCCTCGTTGTCTCTTCTTTTCCCTCATCTTCATCGCTCTTTTCCTCTCTGCATTGGCTCGCAACACTAAAGAAAAATGCGTGTACACATTCTACGTGAAGACAGGTTCAGTACTGAAGGGAGGAACGGACGCCATGATCAGCGTCACAATCAGCGACGCAAATGGCCAATCGGTGGAGATTGCAGATCTGGAATCTTGGGGGCTGATGGAAAAAAACCATGACTATTTTGAACGAGACAATGTCGACATATTCAGTGGGCGGGGCCCGTGCATCGAAGCGCCGTTGTGTCGATTGAACCTGACCTCCGACGGATCAGGCGCCCACCACGGCTGGTTTTGCGACTATCTGGAGGTGACTTCGACTGGGCCACACAGATCCTGCTCCCAGACGGCGTTTTATGTGGACCAGTGGCTGGCCACCGACGCGCCGCCATTTCAGCTGACGACGATTCTGGACGGGTGCGATGATTGGATCAAGGGACATGGAGAGTCGAGGCATACGAGTAGCGGAAAGCTGGTGGTCTCCGGTTCCAAAGGATCTGCTTCGTTGTAA

Coding sequence (CDS)

ATGGCGCCTCGTTGTCTCTTCTTTTCCCTCATCTTCATCGCTCTTTTCCTCTCTGCATTGGCTCGCAACACTAAAGAAAAATGCGTGTACACATTCTACGTGAAGACAGGTTCAGTACTGAAGGGAGGAACGGACGCCATGATCAGCGTCACAATCAGCGACGCAAATGGCCAATCGGTGGAGATTGCAGATCTGGAATCTTGGGGGCTGATGGAAAAAAACCATGACTATTTTGAACGAGACAATGTCGACATATTCAGTGGGCGGGGCCCGTGCATCGAAGCGCCGTTGTGTCGATTGAACCTGACCTCCGACGGATCAGGCGCCCACCACGGCTGGTTTTGCGACTATCTGGAGGTGACTTCGACTGGGCCACACAGATCCTGCTCCCAGACGGCGTTTTATGTGGACCAGTGGCTGGCCACCGACGCGCCGCCATTTCAGCTGACGACGATTCTGGACGGGTGCGATGATTGGATCAAGGGACATGGAGAGTCGAGGCATACGAGTAGCGGAAAGCTGGTGGTCTCCGGTTCCAAAGGATCTGCTTCGTTGTAA

Protein sequence

MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSVEIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEVTSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSKGSASL

Homology

[Close]

BLAST of Csor.00g040680 vs. ExPASy Swiss-Prot
Match: O65660 (PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 8.1e-41
Identity = 76/158 (48.10%), Postives = 109/158 (68.99%), Query Frame = 0


Query: 1   MAPRCLFFSLIFIALFLSALA-RNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQS 60
           MA R +    + +   +SA+A       CVYTFY++TGS+ K GTD++IS  I D +G  
Sbjct: 1   MARRDVLLPFLLLLATVSAVAFAEDDPDCVYTFYLRTGSIWKAGTDSIISARIYDKDGDY 60

Query: 61  VEIADLESW-GLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYL 120
           + I +L++W GLM  +++YFER N+DIFSGR PC+ +P+C LNLTSDGSG HHGW+ +Y+
Sbjct: 61  IGIKNLQAWAGLMGPDYNYFERGNLDIFSGRAPCLPSPICALNLTSDGSGDHHGWYVNYV 120

Query: 121 EVTSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGC 157
           E+T+ G H  CS   F ++QWLATD  P++LT + + C
Sbjct: 121 EITTAGVHAQCSTQDFEIEQWLATDTSPYELTAVRNNC 158

[Close]

BLAST of Csor.00g040680 vs. ExPASy Swiss-Prot
Match: Q9SIE7 (PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.8e-40
Identity = 77/160 (48.12%), Postives = 112/160 (70.00%), Query Frame = 0


Query: 1   MAPR--CLFFSLIFIALFLSALA-RNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANG 60
           M PR   LF SL+ +   +SA+A  + +  CVYTF+++TGS  K GTD++IS  + D  G
Sbjct: 1   MMPRRDVLFLSLLLVIATVSAVALADDEADCVYTFFLRTGSTFKAGTDSIISARVYDKYG 60

Query: 61  QSVEIADLESW-GLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCD 120
             + I +LE+W GLM   ++Y+ER N+DIFSG+ PC+ +P+C LNLTSDGSG HHGW+ +
Sbjct: 61  DYIGIRNLEAWGGLMGPGYNYYERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVN 120

Query: 121 YLEVTSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGC 157
           Y+EVT+ G H  CS  +F V+QWLA+D  P++L+ + + C
Sbjct: 121 YVEVTTAGVHAKCSYQSFDVEQWLASDTSPYELSAVRNNC 160

[Close]

BLAST of Csor.00g040680 vs. ExPASy Swiss-Prot
Match: Q2V2V3 (PLAT domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLAT3 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 4.9e-30
Identity = 61/104 (58.65%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 48  ISVTISDANGQSVEIADLESW-GLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDG 107
           +S+ + D+ GQ   I+DL SW GLM   HDYFER N+DIFSG G C+  P+C +NLTSDG
Sbjct: 1   MSLRLYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLSGPVCAMNLTSDG 60

Query: 108 SGAHHGWFCDYLEVT-STGPHRSCSQTAFYVDQWLATDAPPFQL 150
           SG HHGW+C+Y+EVT S    RSCSQ  F V+QWLA DA P++L
Sbjct: 61  SGDHHGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

[Close]

BLAST of Csor.00g040680 vs. ExPASy Swiss-Prot
Match: C8YR32 (Lipoxygenase homology domain-containing protein 1 OS=Mus musculus OX=10090 GN=Loxhd1 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 4.5e-07
Identity = 36/112 (32.14%), Postives = 50/112 (44.64%), Query Frame = 0


Query: 30   YTFYVKTGSVLKGGTDAMISVTISDANGQSVEIADLESWGLMEKNHDYFERDNVDIFSGR 89
            YT  VKT  +L  GTDA + + I   NG S  +A  +S      N + FER+N D F+  
Sbjct: 1682 YTVSVKTSDILGAGTDANVFIIIFGENGDSGTLALKQS-----ANWNKFERNNTDTFNFS 1741

Query: 90   GPCIEAPLCRLNLTSDGSGAHHGWFCDYLEVTSTGPHRSCSQTAFYVDQWLA 142
                   LC+L +  D  G   GW   Y++V       +     F  D WL+
Sbjct: 1742 DMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSRDET---FRFQCDCWLS 1785

[Close]

BLAST of Csor.00g040680 vs. ExPASy Swiss-Prot
Match: Q8IVV2 (Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LOXHD1 PE=2 SV=4)

HSP 1 Score: 55.8 bits (133), Expect = 5.8e-07
Identity = 36/112 (32.14%), Postives = 50/112 (44.64%), Query Frame = 0


Query: 30   YTFYVKTGSVLKGGTDAMISVTISDANGQSVEIADLESWGLMEKNHDYFERDNVDIFSGR 89
            YT  VKT  +L  GTDA + + I   NG S  +A  +S      N + FER+N D F+  
Sbjct: 1681 YTVAVKTSDILGAGTDANVFIIIFGENGDSGTLALKQS-----ANWNKFERNNTDTFNFP 1740

Query: 90   GPCIEAPLCRLNLTSDGSGAHHGWFCDYLEVTSTGPHRSCSQTAFYVDQWLA 142
                   LC+L +  D  G   GW   Y++V       +     F  D WL+
Sbjct: 1741 DMLSLGHLCKLRVWHDNKGIFPGWHLSYVDVKDNSRDETFH---FQCDCWLS 1784

[Close]

BLAST of Csor.00g040680 vs. NCBI nr
Match: XP_022957900.1 (PLAT domain-containing protein 3-like [Cucurbita moschata] >KAG6605634.1 PLAT domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035544.1 PLAT domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 385 bits (989), Expect = 3.63e-135
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV 60
           MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV
Sbjct: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV 60

Query: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120
           EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV
Sbjct: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120

Query: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK 180
           TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK
Sbjct: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK 180

Query: 181 GSASL 185
           GSASL
Sbjct: 181 GSASL 185

[Close]

BLAST of Csor.00g040680 vs. NCBI nr
Match: XP_023534497.1 (PLAT domain-containing protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 382 bits (980), Expect = 8.56e-134
Identity = 183/185 (98.92%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV 60
           MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDA+ISVTISDANGQ V
Sbjct: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAIISVTISDANGQPV 60

Query: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120
           EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV
Sbjct: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120

Query: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK 180
           TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK
Sbjct: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK 180

Query: 181 GSASL 185
           GSASL
Sbjct: 181 GSASL 185

[Close]

BLAST of Csor.00g040680 vs. NCBI nr
Match: XP_022994993.1 (PLAT domain-containing protein 3-like [Cucurbita maxima])

HSP 1 Score: 376 bits (966), Expect = 1.17e-131
Identity = 181/185 (97.84%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV 60
           MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDA+ISVTISDANGQSV
Sbjct: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAIISVTISDANGQSV 60

Query: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120
           EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV
Sbjct: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120

Query: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK 180
           TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGH  SRHTS GKLVVSGSK
Sbjct: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHEASRHTSRGKLVVSGSK 180

Query: 181 GSASL 185
           GSASL
Sbjct: 181 GSASL 185

[Close]

BLAST of Csor.00g040680 vs. NCBI nr
Match: XP_004145970.2 (PLAT domain-containing protein 3 [Cucumis sativus] >KGN49942.1 hypothetical protein Csa_000620 [Cucumis sativus])

HSP 1 Score: 310 bits (795), Expect = 1.42e-105
Identity = 141/180 (78.33%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV 60
           MA   L FS+IFIALF S++A N+ EKCVYT YVKTGS+LKGGTD+ ISVT+ D+ GQSV
Sbjct: 1   MASPSLCFSIIFIALFFSSMAVNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSV 60

Query: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120
           EI+DLESWGLM++ HDYFERDN+DIFSGRG C+E+P+CRLNLTSDGSG+HHGWFCDY+EV
Sbjct: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEV 120

Query: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK 180
           TS GPHR+CSQTAFYVDQWLATDAPPFQLTTILDGCDDW+ GHG SRH  SGKL+VS SK
Sbjct: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWLSGHGASRHMHSGKLMVSSSK 180

[Close]

BLAST of Csor.00g040680 vs. NCBI nr
Match: KAA0042612.1 (Lipoxygenase, LH2 [Cucumis melo var. makuwa] >TYK06014.1 Lipoxygenase, LH2 [Cucumis melo var. makuwa])

HSP 1 Score: 306 bits (783), Expect = 9.59e-104
Identity = 138/180 (76.67%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV 60
           MA   L FS+IFIALF SA+A  + EKCVYT YVKTGS+LKGGTD+ ISV + D+ GQSV
Sbjct: 1   MASSSLCFSIIFIALFFSAMADKSSEKCVYTLYVKTGSILKGGTDSKISVKLGDSRGQSV 60

Query: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120
           EI+DLESWGLM++ HDYFERDN+DIFSGRG C+E+P+CRLNLTSDGSG+HHGW+CDY+EV
Sbjct: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWYCDYVEV 120

Query: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK 180
           TS GPHR+CSQTAFYVDQWLATDAPPFQLTT LDGCDDW+ GHG SRH + GKLVVSGS+
Sbjct: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTTLDGCDDWLSGHGPSRHMNRGKLVVSGSR 180

[Close]

BLAST of Csor.00g040680 vs. ExPASy TrEMBL
Match: A0A6J1H1X8 (PLAT domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111459298 PE=4 SV=1)

HSP 1 Score: 385 bits (989), Expect = 1.76e-135
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV 60
           MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV
Sbjct: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV 60

Query: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120
           EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV
Sbjct: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120

Query: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK 180
           TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK
Sbjct: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK 180

Query: 181 GSASL 185
           GSASL
Sbjct: 181 GSASL 185

[Close]

BLAST of Csor.00g040680 vs. ExPASy TrEMBL
Match: A0A6J1K6M5 (PLAT domain-containing protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111490681 PE=4 SV=1)

HSP 1 Score: 376 bits (966), Expect = 5.66e-132
Identity = 181/185 (97.84%), Postives = 182/185 (98.38%), Query Frame = 0


Query: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV 60
           MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDA+ISVTISDANGQSV
Sbjct: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAIISVTISDANGQSV 60

Query: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120
           EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV
Sbjct: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120

Query: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK 180
           TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGH  SRHTS GKLVVSGSK
Sbjct: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHEASRHTSRGKLVVSGSK 180

Query: 181 GSASL 185
           GSASL
Sbjct: 181 GSASL 185

[Close]

BLAST of Csor.00g040680 vs. ExPASy TrEMBL
Match: A0A0A0KNI5 (PLAT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141160 PE=4 SV=1)

HSP 1 Score: 310 bits (795), Expect = 6.89e-106
Identity = 141/180 (78.33%), Postives = 161/180 (89.44%), Query Frame = 0


Query: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV 60
           MA   L FS+IFIALF S++A N+ EKCVYT YVKTGS+LKGGTD+ ISVT+ D+ GQSV
Sbjct: 1   MASPSLCFSIIFIALFFSSMAVNSSEKCVYTLYVKTGSILKGGTDSKISVTLGDSRGQSV 60

Query: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120
           EI+DLESWGLM++ HDYFERDN+DIFSGRG C+E+P+CRLNLTSDGSG+HHGWFCDY+EV
Sbjct: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWFCDYVEV 120

Query: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK 180
           TS GPHR+CSQTAFYVDQWLATDAPPFQLTTILDGCDDW+ GHG SRH  SGKL+VS SK
Sbjct: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTILDGCDDWLSGHGASRHMHSGKLMVSSSK 180

[Close]

BLAST of Csor.00g040680 vs. ExPASy TrEMBL
Match: A0A5A7TGT6 (Lipoxygenase, LH2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001120 PE=4 SV=1)

HSP 1 Score: 306 bits (783), Expect = 4.64e-104
Identity = 138/180 (76.67%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV 60
           MA   L FS+IFIALF SA+A  + EKCVYT YVKTGS+LKGGTD+ ISV + D+ GQSV
Sbjct: 1   MASSSLCFSIIFIALFFSAMADKSSEKCVYTLYVKTGSILKGGTDSKISVKLGDSRGQSV 60

Query: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120
           EI+DLESWGLM++ HDYFERDN+DIFSGRG C+E+P+CRLNLTSDGSG+HHGW+CDY+EV
Sbjct: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWYCDYVEV 120

Query: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK 180
           TS GPHR+CSQTAFYVDQWLATDAPPFQLTT LDGCDDW+ GHG SRH + GKLVVSGS+
Sbjct: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTTLDGCDDWLSGHGPSRHMNRGKLVVSGSR 180

[Close]

BLAST of Csor.00g040680 vs. ExPASy TrEMBL
Match: A0A1S3AUB5 (uncharacterized protein LOC103482902 OS=Cucumis melo OX=3656 GN=LOC103482902 PE=4 SV=1)

HSP 1 Score: 305 bits (780), Expect = 1.33e-103
Identity = 137/180 (76.11%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 1   MAPRCLFFSLIFIALFLSALARNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQSV 60
           MA   L FS+IFIALF SA+A  + EKCVYT YVKTGS+LKGGTD+ ISV + D+ GQSV
Sbjct: 1   MASSSLCFSIIFIALFFSAMADKSSEKCVYTLYVKTGSILKGGTDSKISVKLGDSRGQSV 60

Query: 61  EIADLESWGLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYLEV 120
           EI+DLESWGLM++ HDYFERDN+DIFSGRG C+E+P+CRLNLTSDGSG+HHGW+CDY+EV
Sbjct: 61  EISDLESWGLMKQGHDYFERDNIDIFSGRGVCLESPVCRLNLTSDGSGSHHGWYCDYVEV 120

Query: 121 TSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGCDDWIKGHGESRHTSSGKLVVSGSK 180
           TS GPHR+CSQTAFYVDQWLATDAPPFQLTT LDGCDDW+ GHG SRH + G+LVVSGS+
Sbjct: 121 TSAGPHRACSQTAFYVDQWLATDAPPFQLTTTLDGCDDWLSGHGPSRHMNRGRLVVSGSR 180

[Close]

BLAST of Csor.00g040680 vs. TAIR 10
Match: AT4G39730.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 168.3 bits (425), Expect = 5.7e-42
Identity = 76/158 (48.10%), Postives = 109/158 (68.99%), Query Frame = 0


Query: 1   MAPRCLFFSLIFIALFLSALA-RNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANGQS 60
           MA R +    + +   +SA+A       CVYTFY++TGS+ K GTD++IS  I D +G  
Sbjct: 1   MARRDVLLPFLLLLATVSAVAFAEDDPDCVYTFYLRTGSIWKAGTDSIISARIYDKDGDY 60

Query: 61  VEIADLESW-GLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCDYL 120
           + I +L++W GLM  +++YFER N+DIFSGR PC+ +P+C LNLTSDGSG HHGW+ +Y+
Sbjct: 61  IGIKNLQAWAGLMGPDYNYFERGNLDIFSGRAPCLPSPICALNLTSDGSGDHHGWYVNYV 120

Query: 121 EVTSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGC 157
           E+T+ G H  CS   F ++QWLATD  P++LT + + C
Sbjct: 121 EITTAGVHAQCSTQDFEIEQWLATDTSPYELTAVRNNC 158

[Close]

BLAST of Csor.00g040680 vs. TAIR 10
Match: AT2G22170.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 167.2 bits (422), Expect = 1.3e-41
Identity = 77/160 (48.12%), Postives = 112/160 (70.00%), Query Frame = 0


Query: 1   MAPR--CLFFSLIFIALFLSALA-RNTKEKCVYTFYVKTGSVLKGGTDAMISVTISDANG 60
           M PR   LF SL+ +   +SA+A  + +  CVYTF+++TGS  K GTD++IS  + D  G
Sbjct: 1   MMPRRDVLFLSLLLVIATVSAVALADDEADCVYTFFLRTGSTFKAGTDSIISARVYDKYG 60

Query: 61  QSVEIADLESW-GLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDGSGAHHGWFCD 120
             + I +LE+W GLM   ++Y+ER N+DIFSG+ PC+ +P+C LNLTSDGSG HHGW+ +
Sbjct: 61  DYIGIRNLEAWGGLMGPGYNYYERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVN 120

Query: 121 YLEVTSTGPHRSCSQTAFYVDQWLATDAPPFQLTTILDGC 157
           Y+EVT+ G H  CS  +F V+QWLA+D  P++L+ + + C
Sbjct: 121 YVEVTTAGVHAKCSYQSFDVEQWLASDTSPYELSAVRNNC 160

[Close]

BLAST of Csor.00g040680 vs. TAIR 10
Match: AT5G65158.1 (Lipase/lipooxygenase, PLAT/LH2 family protein )

HSP 1 Score: 132.5 bits (332), Expect = 3.5e-31
Identity = 61/104 (58.65%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 48  ISVTISDANGQSVEIADLESW-GLMEKNHDYFERDNVDIFSGRGPCIEAPLCRLNLTSDG 107
           +S+ + D+ GQ   I+DL SW GLM   HDYFER N+DIFSG G C+  P+C +NLTSDG
Sbjct: 1   MSLRLYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLSGPVCAMNLTSDG 60

Query: 108 SGAHHGWFCDYLEVT-STGPHRSCSQTAFYVDQWLATDAPPFQL 150
           SG HHGW+C+Y+EVT S    RSCSQ  F V+QWLA DA P++L
Sbjct: 61  SGDHHGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

The following BLAST results are available for this feature:

BLAST of Csor.00g040680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65660	8.1e-41	48.10	PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 S...	[more]
Q9SIE7	1.8e-40	48.13	PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 S...	[more]
Q2V2V3	4.9e-30	58.65	PLAT domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLAT3 PE=4 S...	[more]
C8YR32	4.5e-07	32.14	Lipoxygenase homology domain-containing protein 1 OS=Mus musculus OX=10090 GN=Lo...	[more]
Q8IVV2	5.8e-07	32.14	Lipoxygenase homology domain-containing protein 1 OS=Homo sapiens OX=9606 GN=LOX...	[more]

BLAST of Csor.00g040680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957900.1	3.63e-135	100.00	PLAT domain-containing protein 3-like [Cucurbita moschata] >KAG6605634.1 PLAT do...	[more]
XP_023534497.1	8.56e-134	98.92	PLAT domain-containing protein 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022994993.1	1.17e-131	97.84	PLAT domain-containing protein 3-like [Cucurbita maxima]	[more]
XP_004145970.2	1.42e-105	78.33	PLAT domain-containing protein 3 [Cucumis sativus] >KGN49942.1 hypothetical prot...	[more]
KAA0042612.1	9.59e-104	76.67	Lipoxygenase, LH2 [Cucumis melo var. makuwa] >TYK06014.1 Lipoxygenase, LH2 [Cucu...	[more]

BLAST of Csor.00g040680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1X8	1.76e-135	100.00	PLAT domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111459...	[more]
A0A6J1K6M5	5.66e-132	97.84	PLAT domain-containing protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC11149068...	[more]
A0A0A0KNI5	6.89e-106	78.33	PLAT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141160 PE=4 S...	[more]
A0A5A7TGT6	4.64e-104	76.67	Lipoxygenase, LH2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00...	[more]
A0A1S3AUB5	1.33e-103	76.11	uncharacterized protein LOC103482902 OS=Cucumis melo OX=3656 GN=LOC103482902 PE=...	[more]

BLAST of Csor.00g040680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39730.1	5.7e-42	48.10	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT2G22170.1	1.3e-41	48.13	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT5G65158.1	3.5e-31	58.65	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.60.20	PLAT/LH2 domain	coord: 16..145 e-value: 1.8E-20 score: 75.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..185
None	No IPR available	PANTHER	PTHR31718:SF47	PLAT DOMAIN-CONTAINING PROTEIN 3-LIKE	coord: 7..182
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 7..182
IPR001024	PLAT/LH2 domain	PFAM	PF01477	PLAT	coord: 30..144 e-value: 3.8E-11 score: 43.6
IPR001024	PLAT/LH2 domain	PROSITE	PS50095	PLAT	coord: 28..154 score: 22.061459
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 25..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g040680.m01	Csor.00g040680.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005515	protein binding