Csor.00g040550 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGAGAAGCTTTCCACCACGTACCACTCCACTCTCTATATAATCACTCTCTTCTTCACCTTCAACAAAGACCCATATAATTTTTCAATGGCGGAATCTCGTAATTCTCAGCTCTACAAAGCCCGACAGACCTCGAATGAATTACCCCGCTCCCACAAAGTCGTCAAGGCCATTACCGCAGCCACAACTGGCGGCTCCCTCCTCGCCCTCTCCGGCCTCACAATGACTGGTACAGTCATTGCTCTAGCCATCGCCACACCGCTGTTTGTCATATTCAGTCCAGTTCTCGTCCCGGCGGCGATCACTGTCTCACTTTTGATCATGGGGTTCTTGATATCTGGTGGATTTGGCATCGCTGCGGCGGTTGTTTTGTGGTGGTTTTTCAGGTACGTGGCTGGGAGAAGGCAAGATGCTAACAATGATTTGCCCGGAAAAAAATCGTATAAGTTTGGCGGTAAGGGGATACAAGTTGAAGGTTGA ATGCAAGAGAAGCTTTCCACCACGTACCACTCCACTCTCTATATAATCACTCTCTTCTTCACCTTCAACAAAGACCCATATAATTTTTCAATGGCGGAATCTCGTAATTCTCAGCTCTACAAAGCCCGACAGACCTCGAATGAATTACCCCGCTCCCACAAAGTCGTCAAGGCCATTACCGCAGCCACAACTGGCGGCTCCCTCCTCGCCCTCTCCGGCCTCACAATGACTGGTACAGTCATTGCTCTAGCCATCGCCACACCGCTGTTTGTCATATTCAGTCCAGTTCTCGTCCCGGCGGCGATCACTGTCTCACTTTTGATCATGGGGTTCTTGATATCTGGTGGATTTGGCATCGCTGCGGCGGTTGTTTTGTGGTGGTTTTTCAGGTACGTGGCTGGGAGAAGGCAAGATGCTAACAATGATTTGCCCGGAAAAAAATCGTATAAGTTTGGCGGTAAGGGGATACAAGTTGAAGGTTGA ATGCAAGAGAAGCTTTCCACCACGTACCACTCCACTCTCTATATAATCACTCTCTTCTTCACCTTCAACAAAGACCCATATAATTTTTCAATGGCGGAATCTCGTAATTCTCAGCTCTACAAAGCCCGACAGACCTCGAATGAATTACCCCGCTCCCACAAAGTCGTCAAGGCCATTACCGCAGCCACAACTGGCGGCTCCCTCCTCGCCCTCTCCGGCCTCACAATGACTGGTACAGTCATTGCTCTAGCCATCGCCACACCGCTGTTTGTCATATTCAGTCCAGTTCTCGTCCCGGCGGCGATCACTGTCTCACTTTTGATCATGGGGTTCTTGATATCTGGTGGATTTGGCATCGCTGCGGCGGTTGTTTTGTGGTGGTTTTTCAGGTACGTGGCTGGGAGAAGGCAAGATGCTAACAATGATTTGCCCGGAAAAAAATCGTATAAGTTTGGCGGTAAGGGGATACAAGTTGAAGGTTGA MQEKLSTTYHSTLYIITLFFTFNKDPYNFSMAESRNSQLYKARQTSNELPRSHKVVKAITAATTGGSLLALSGLTMTGTVIALAIATPLFVIFSPVLVPAAITVSLLIMGFLISGGFGIAAAVVLWWFFRYVAGRRQDANNDLPGKKSYKFGGKGIQVEG Homology
BLAST of Csor.00g040550 vs. ExPASy Swiss-Prot
Match: Q43804 (Oleosin 1 OS=Prunus dulcis OX=3755 GN=OLE1 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 5.9e-24 Identity = 65/110 (59.09%), Postives = 78/110 (70.91%), Query Frame = 0
BLAST of Csor.00g040550 vs. ExPASy Swiss-Prot
Match: Q9XHP2 (Oleosin L OS=Sesamum indicum OX=4182 PE=1 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 6.6e-23 Identity = 62/99 (62.63%), Postives = 72/99 (72.73%), Query Frame = 0
BLAST of Csor.00g040550 vs. ExPASy Swiss-Prot
Match: Q45W87 (Oleosin Ara h 11.0101 OS=Arachis hypogaea OX=3818 GN=Ahy_B10g105758 PE=1 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.1e-22 Identity = 65/121 (53.72%), Postives = 80/121 (66.12%), Query Frame = 0
BLAST of Csor.00g040550 vs. ExPASy Swiss-Prot
Match: P29111 (Major oleosin NAP-II (Fragment) OS=Brassica napus OX=3708 PE=1 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 7.3e-22 Identity = 60/104 (57.69%), Postives = 73/104 (70.19%), Query Frame = 0
BLAST of Csor.00g040550 vs. ExPASy Swiss-Prot
Match: Q45W86 (Oleosin Ara h 11.0102 OS=Arachis hypogaea OX=3818 GN=Ahy_A10g047467 PE=1 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.8e-21 Identity = 60/105 (57.14%), Postives = 71/105 (67.62%), Query Frame = 0
BLAST of Csor.00g040550 vs. NCBI nr
Match: KAG6605647.1 (Oleosin 14.9 kDa, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 300 bits (768), Expect = 2.74e-102 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of Csor.00g040550 vs. NCBI nr
Match: KAG7035557.1 (Oleosin 14.9 kDa, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 240 bits (612), Expect = 6.02e-79 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0
BLAST of Csor.00g040550 vs. NCBI nr
Match: XP_023533015.1 (oleosin 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 218 bits (556), Expect = 2.05e-70 Identity = 117/129 (90.70%), Postives = 124/129 (96.12%), Query Frame = 0
BLAST of Csor.00g040550 vs. NCBI nr
Match: XP_011654853.1 (oleosin 1 [Cucumis sativus] >KGN50321.1 hypothetical protein Csa_000425 [Cucumis sativus]) HSP 1 Score: 142 bits (357), Expect = 3.36e-39 Identity = 94/169 (55.62%), Postives = 109/169 (64.50%), Query Frame = 0
BLAST of Csor.00g040550 vs. NCBI nr
Match: XP_008436973.1 (PREDICTED: oleosin 1-like [Cucumis melo] >KAA0055081.1 oleosin 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 134 bits (338), Expect = 2.92e-37 Identity = 81/131 (61.83%), Postives = 94/131 (71.76%), Query Frame = 0
BLAST of Csor.00g040550 vs. ExPASy TrEMBL
Match: A0A0A0KRH1 (Oleosin-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G167130 PE=3 SV=1) HSP 1 Score: 142 bits (357), Expect = 1.63e-39 Identity = 94/169 (55.62%), Postives = 109/169 (64.50%), Query Frame = 0
BLAST of Csor.00g040550 vs. ExPASy TrEMBL
Match: A0A5A7UNC6 (Oleosin 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00070 PE=3 SV=1) HSP 1 Score: 134 bits (338), Expect = 1.41e-37 Identity = 81/131 (61.83%), Postives = 94/131 (71.76%), Query Frame = 0
BLAST of Csor.00g040550 vs. ExPASy TrEMBL
Match: A0A1S3ASX2 (oleosin 1-like OS=Cucumis melo OX=3656 GN=LOC103482543 PE=3 SV=1) HSP 1 Score: 134 bits (338), Expect = 1.41e-37 Identity = 81/131 (61.83%), Postives = 94/131 (71.76%), Query Frame = 0
BLAST of Csor.00g040550 vs. ExPASy TrEMBL
Match: A0A6J1E2L5 (Oleosin OS=Momordica charantia OX=3673 GN=LOC111025916 PE=3 SV=1) HSP 1 Score: 122 bits (306), Expect = 1.15e-32 Identity = 67/117 (57.26%), Postives = 87/117 (74.36%), Query Frame = 0
BLAST of Csor.00g040550 vs. ExPASy TrEMBL
Match: A0A5N6R9T3 (Oleosin OS=Carpinus fangiana OX=176857 GN=FH972_013591 PE=3 SV=1) HSP 1 Score: 121 bits (304), Expect = 2.85e-32 Identity = 69/94 (73.40%), Postives = 75/94 (79.79%), Query Frame = 0
BLAST of Csor.00g040550 vs. TAIR 10
Match: AT4G25140.1 (oleosin 1 ) HSP 1 Score: 102.8 bits (255), Expect = 2.6e-22 Identity = 61/120 (50.83%), Postives = 77/120 (64.17%), Query Frame = 0
BLAST of Csor.00g040550 vs. TAIR 10
Match: AT5G51210.1 (oleosin3 ) HSP 1 Score: 102.8 bits (255), Expect = 2.6e-22 Identity = 57/94 (60.64%), Postives = 69/94 (73.40%), Query Frame = 0
BLAST of Csor.00g040550 vs. TAIR 10
Match: AT2G25890.1 (Oleosin family protein ) HSP 1 Score: 99.4 bits (246), Expect = 2.8e-21 Identity = 55/93 (59.14%), Postives = 68/93 (73.12%), Query Frame = 0
BLAST of Csor.00g040550 vs. TAIR 10
Match: AT5G40420.1 (oleosin 2 ) HSP 1 Score: 71.6 bits (174), Expect = 6.3e-13 Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 0
BLAST of Csor.00g040550 vs. TAIR 10
Match: AT3G27660.1 (oleosin 4 ) HSP 1 Score: 67.4 bits (163), Expect = 1.2e-11 Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|