Csor.00g040400 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g040400
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Protein of unknown function (DUF1218)
Location	Csor_Chr02: 6237744 .. 6240662 (+)
RNA-Seq Expression	Csor.00g040400
Synteny	Csor.00g040400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTGTTCTGTTGTGGGCTTATTGGGGATTTTGTCGGCTGTCACTGGTTTTGTTGCTGAAGCTACTAGAATCAAGGTGATTTCTCATCATTTTTGCTTCAACTCCTCTTTAGTTTGATCTTGTTTGGCCTATTTTTCATTGGGTTTTTGCTTGCATTTGGGTTTATGTTTGTGGGTTTTTCTTGTGTTTTGCTACCAATGTATCTTAGTGGACTGGTTGCAGTTCTTTTGATGTTTTTGATTGTTCTAAGCTTCAAGATTTAAGGGTTCTTTTTGGTTTTTCATTTTCGGATTTGGGTTGGTGCTTCAGATCATTGAGACGTTAAATTGTTGAGCTGTTCTTCATGGGAAGCTTCCTAAGCAACAAATCTTTCCTTCAATTTGTGCTCTGTTTTTTTCTTAATGTTCTTAGTTGAGGCACTGTTGGTTTAGATTGTTTATATTGTTCAGCTTATATTGGGTGGTTTCCAGCCCCTTTTGTAAATCCAAGCAGATTTTGTGGCTTCATGTGGTCGAATTGATCCTTTTGGAACCTTGGTTTGAAAGAAATCTAAGGATTTTTCATGATAAGAATCAAGAGATGGAATGTTTCGATTCAGTTCGTTTAAAAGGTTCTTCGTGGTGTTCTCGTTTCGCTCTCTAACCAATGTGAGATCTCATAATCCACTCCCTTCGGGGGCTAACGTCCTCGCTGGCACACCGCTCGGTGTTTGACTCTTATATCATTTGTAATAACCCAAACCCTTTGCTTGTAGATATTGTTCTCTTTGGACTTCCCTCAAGGTTCCAAAAACGTGTCTACTAGGGAGAGGTTTCCACACCCTTATGAGGAATGTTTTGTTCCCCTCTCCAACCAATGTGAGATCTCACAATCCACTCCCTTGTGTGCTAGCCCGGCTGTGTCTAGCTTGATACCATTTAAAACGTCCCAAACCTTTCGCTTGTAGATATTATTCTCTTTGGGTTTCCCTTCTGGCTTCCCCTCAAGGTTCTAAAATGTGTCTGCTAGAGAGATGTTTCCACACCCTTATGAGGAATGTTTCATTCCGCTTTCCAACCAATGTGGGATCTCACAAACCACCCCTCTTAGGGGCTAGCGTCTTCGCTGGCACACCACTCAATGTCTGGCTCCGATACCATTTGTAACGGCCCAAGCCCACCGCTTGCAAATATTGTCTTCTTTGGACTTTCCCTTCTGGGCTTCCCCTCAAGGTTTTGAAACGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAACGAATGTTTCGTTCTTCTCTCTAACCGACGTGGGATCTCACAATCATTGTTAGTAGTGGGCTTGGGCTGGTGGACACACGAGAATGTAATGAGAAATGGGTTGTGGTAGAGAAATATATAGTTCGAGCGGAAGAGTTCGAGCGGTATGCTTTTGCAGCATACTTAATTTGTTGTGTGATTTGTACTTGGGAGAAAGGGACAGCTCTCTAAATCTTCCAGACTCACCTTTACTGATAAATGAGTCCTAATTTCTATCAATATTAGTATCAGAGCAAGTTTATGATCGGGAATGACTACTCGTATGGACTCGTGGATGGAAACGATTGAGGGGTGAATGACAGAGTTTCAGAGCTCTGTGGAGAAGGAATTTCGGCTGATTCGAGAGACAATGATGACATAGAGATCGAACGGACTGTCGAAAAGGCGTGGCTGATGTCAGATTGAATAGATCAGGAACCTGTTATTATTATGATCTTTGTTGGTTCATGTTCTAAAAAACTATTCTACGATTTAGATGGTGCATTTACCTGTTGTTCTTCTGGTATTAGTTCTTGGTTCCTGAATCTACGAGCGGAGTAACGTCGATTCAAATTTATCTGACAGGGCTCGCAGGTTCAGTTCGTTTCGACATCTGAGTGTGCATATCCCCGAAGTCCTGCTATGGGTCTCGGTTTAACGGCTGCGATTTCTCTGTTGATTGCTCAGCTAATTATAAATGTTTCTAGTGGTTGCATTTGTTGCAAAAGAAGTCCTAATCCTTCCAATCCTAATTGGAAAATAGCACTCCTGAGCTTTGTTATTTCGTGGTAAGTTTTTTTTAGGACCGGTCAGTTCAAGCTCACCGTTAGTAGATATTGTCCTTTATATGCTTTCACTTTCGGGTTTCCCCTCAAGTTTTTAAGACTTGAACGCGTCTGCTAGAGAGAGGTTTCCACACCCTTATAAGGAATGCTTCGTTCCCTTCTCCAACCGATGTGGGATCTCACAATCCACTTAGTACTACTCTCGCCCAAGCAAGCTTAACTGTGGAGTTCTGATGTGATCCCATGCATTAGTGTTGGTATGATCGTGCACTCCTTTAGAAAAATTGTGAGATCTCACATCGGTTGGAGAGGGGAACGGAACATTCCTTGTAAGGGTATGGAAACCTCTTCCTAACAGACGCGTTTTAAAAACTTGAGGGGAAGTCCAGAAGGGAAAGCCCAAAGATGACAATATCGGTTAGCAGTGGGCTTGGGCTGATTTGTCGAGTTGAGGATTGAGTCAATACTGGGCTCGCTTTTGAGATGTCTGGAAATGATGGTACCGTGTTTTACGTCTCAGGTTCAGTTTCGTCATAGCGTTCTTGTTGTTGCTGACTGGTGCAGCCCTGAATGACCAGCATGGTGGAGGGACTATGTACTTCGGTAACTACTACTATTACTGCTACGTCGTGAAACCCGGAGTCTTTGCGGGAGGTGCCGTTCTGTCGTTTGCTAGTGTTCTATTGGCAATAGTCTATTATCTAACTCTAAATCTAGCAAAGAACAACAGCCCTCTATGGGGGAATCCTGTTCCAGCTCAGGGCATTGCTTTGGGGCAGCCTCAGTTCCCGCCACAAAATACACAACAACCCGTGTTTGTTCATGAAGACGTGTATGCACGACGACAGTATGCGTGA

mRNA sequence

ATGGTGTGTTCTGTTGTGGGCTTATTGGGGATTTTGTCGGCTGTCACTGGTTTTGTTGCTGAAGCTACTAGAATCAAGGGCTCGCAGGTTCAGTTCGTTTCGACATCTGAGTGTGCATATCCCCGAAGTCCTGCTATGGGTCTCGGTTTAACGGCTGCGATTTCTCTGTTGATTGCTCAGCTAATTATAAATGTTTCTAGTGGTTGCATTTGTTGCAAAAGAAGTCCTAATCCTTCCAATCCTAATTGGAAAATAGCACTCCTGAGCTTTGTTATTTCGTGGTTCAGTTTCGTCATAGCGTTCTTGTTGTTGCTGACTGGTGCAGCCCTGAATGACCAGCATGGTGGAGGGACTATGTACTTCGGTAACTACTACTATTACTGCTACGTCGTGAAACCCGGAGTCTTTGCGGGAGGTGCCGTTCTGTCGTTTGCTAGTGTTCTATTGGCAATAGTCTATTATCTAACTCTAAATCTAGCAAAGAACAACAGCCCTCTATGGGGGAATCCTGTTCCAGCTCAGGGCATTGCTTTGGGGCAGCCTCAGTTCCCGCCACAAAATACACAACAACCCGTGTTTGTTCATGAAGACGTGTATGCACGACGACAGTATGCGTGA

Coding sequence (CDS)

ATGGTGTGTTCTGTTGTGGGCTTATTGGGGATTTTGTCGGCTGTCACTGGTTTTGTTGCTGAAGCTACTAGAATCAAGGGCTCGCAGGTTCAGTTCGTTTCGACATCTGAGTGTGCATATCCCCGAAGTCCTGCTATGGGTCTCGGTTTAACGGCTGCGATTTCTCTGTTGATTGCTCAGCTAATTATAAATGTTTCTAGTGGTTGCATTTGTTGCAAAAGAAGTCCTAATCCTTCCAATCCTAATTGGAAAATAGCACTCCTGAGCTTTGTTATTTCGTGGTTCAGTTTCGTCATAGCGTTCTTGTTGTTGCTGACTGGTGCAGCCCTGAATGACCAGCATGGTGGAGGGACTATGTACTTCGGTAACTACTACTATTACTGCTACGTCGTGAAACCCGGAGTCTTTGCGGGAGGTGCCGTTCTGTCGTTTGCTAGTGTTCTATTGGCAATAGTCTATTATCTAACTCTAAATCTAGCAAAGAACAACAGCCCTCTATGGGGGAATCCTGTTCCAGCTCAGGGCATTGCTTTGGGGCAGCCTCAGTTCCCGCCACAAAATACACAACAACCCGTGTTTGTTCATGAAGACGTGTATGCACGACGACAGTATGCGTGA

Protein sequence

MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQLIINVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDVYARRQYA

Homology

[Close]

BLAST of Csor.00g040400 vs. ExPASy Swiss-Prot
Match: O65708 (Protein MODIFYING WALL LIGNIN-2 OS=Arabidopsis thaliana OX=3702 GN=MWL2 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.0e-07
Identity = 41/143 (28.67%), Postives = 69/143 (48.25%), Query Frame = 0


Query: 4   SVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQLII 63
           SVV  LG++S +T F AE  R +   +++ +   C  P S A GLG  A +   +AQ++ 
Sbjct: 8   SVVFSLGLVSFITCFAAEFKRTQKEDIRWDTERNCYVPGSHAFGLGSAAVLCFCLAQIVG 67

Query: 64  NV---SSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 123
           N+    +     KR       +  +  +  ++SW +FV+  L+L T  +++     G  +
Sbjct: 68  NIVVFRNHRTRTKREDGYKITDLTLPTVLLLLSWSNFVVVVLILSTAISMSRAQAYGEGW 127

Query: 124 FGNYYYYCYVVKPGVFAGGAVLS 144
                  CY+VK GVFA    L+
Sbjct: 128 LDE---DCYLVKDGVFAASGCLA 147

[Close]

BLAST of Csor.00g040400 vs. ExPASy Swiss-Prot
Match: A2RVU1 (Protein MODIFYING WALL LIGNIN-1 OS=Arabidopsis thaliana OX=3702 GN=MWL1 PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 7.2e-06
Identity = 40/142 (28.17%), Postives = 68/142 (47.89%), Query Frame = 0


Query: 25  IKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQLIINVSSGCICCKRSPNPSNPNWK 84
           +KG  +++   S C  P + A GLG+ A + + +AQ++ NV    IC   +         
Sbjct: 32  LKGKDLKWDGES-CYLPENRAFGLGIAALVCVSVAQIVGNV---VICRGFTKTDKTRTTI 91

Query: 85  IALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLS- 144
             ++  + SW +F +A  L+  GA++N +   G  +       CY+VK GVFA    LS 
Sbjct: 92  FCIILLLFSWVNFAVAVTLISVGASMNREQIYGKGWLNR---ECYLVKDGVFAASGFLSV 151

Query: 145 --FASVLLAIVYYLTLNLAKNN 164
              A++L A  + +  +L   N
Sbjct: 152 TTMAAILGAFAFKVKPSLQVEN 166

[Close]

BLAST of Csor.00g040400 vs. NCBI nr
Match: KAG6605662.1 (Protein MODIFYING WALL LIGNIN-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 405 bits (1042), Expect = 1.39e-142
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ 60
           MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ
Sbjct: 1   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ 60

Query: 61  LIINVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 120
           LIINVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY
Sbjct: 61  LIINVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 120

Query: 121 FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 180
           FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ
Sbjct: 121 FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 180

Query: 181 PQFPPQNTQQPVFVHEDVYARRQYA 205
           PQFPPQNTQQPVFVHEDVYARRQYA
Sbjct: 181 PQFPPQNTQQPVFVHEDVYARRQYA 205

[Close]

BLAST of Csor.00g040400 vs. NCBI nr
Match: XP_023532125.1 (uncharacterized protein LOC111794385 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 405 bits (1042), Expect = 1.72e-142
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ 60
           MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ
Sbjct: 7   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ 66

Query: 61  LIINVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 120
           LIINVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY
Sbjct: 67  LIINVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 126

Query: 121 FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 180
           FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ
Sbjct: 127 FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 186

Query: 181 PQFPPQNTQQPVFVHEDVYARRQYA 205
           PQFPPQNTQQPVFVHEDVYARRQYA
Sbjct: 187 PQFPPQNTQQPVFVHEDVYARRQYA 211

[Close]

BLAST of Csor.00g040400 vs. NCBI nr
Match: XP_022958500.1 (uncharacterized protein LOC111459709 [Cucurbita moschata])

HSP 1 Score: 405 bits (1040), Expect = 3.48e-142
Identity = 204/205 (99.51%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ 60
           MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ
Sbjct: 7   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ 66

Query: 61  LIINVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 120
           LIINVSSGCICCKRSPNPSNPNWKIAL+SFVISWFSFVIAFLLLLTGAALNDQHGGGTMY
Sbjct: 67  LIINVSSGCICCKRSPNPSNPNWKIALMSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 126

Query: 121 FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 180
           FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ
Sbjct: 127 FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 186

Query: 181 PQFPPQNTQQPVFVHEDVYARRQYA 205
           PQFPPQNTQQPVFVHEDVYARRQYA
Sbjct: 187 PQFPPQNTQQPVFVHEDVYARRQYA 211

[Close]

BLAST of Csor.00g040400 vs. NCBI nr
Match: XP_022995248.1 (uncharacterized protein LOC111490852 [Cucurbita maxima])

HSP 1 Score: 400 bits (1029), Expect = 1.65e-140
Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 0


Query: 1   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ 60
           MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ
Sbjct: 7   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ 66

Query: 61  LIINVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 120
           LIINVSSGCICCKRSPNPSNPNWKIAL+SFVISWFSFVIAFLLLLTGAALNDQHGGGTMY
Sbjct: 67  LIINVSSGCICCKRSPNPSNPNWKIALVSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 126

Query: 121 FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 180
           FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ
Sbjct: 127 FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 186

Query: 181 PQFPPQNTQQPVFVHEDVYARRQYA 205
           PQF PQNTQQPVFVHEDVYARRQYA
Sbjct: 187 PQFLPQNTQQPVFVHEDVYARRQYA 211

[Close]

BLAST of Csor.00g040400 vs. NCBI nr
Match: XP_038874324.1 (uncharacterized protein LOC120067025 [Benincasa hispida])

HSP 1 Score: 399 bits (1026), Expect = 4.74e-140
Identity = 200/205 (97.56%), Postives = 203/205 (99.02%), Query Frame = 0


Query: 1   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ 60
           +VCSVVGLLGILSAVTGFVAEATRIKGSQVQF+STSECAYPRSPAMGLGLTAAISLLIAQ
Sbjct: 7   VVCSVVGLLGILSAVTGFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQ 66

Query: 61  LIINVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 120
           LI+NVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY
Sbjct: 67  LIVNVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 126

Query: 121 FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 180
           FGNYYYYCYVVKPGVFAGGAVLS ASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ
Sbjct: 127 FGNYYYYCYVVKPGVFAGGAVLSLASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 186

Query: 181 PQFPPQNTQQPVFVHEDVYARRQYA 205
           PQFPPQNTQQPVFVHED YARRQYA
Sbjct: 187 PQFPPQNTQQPVFVHEDTYARRQYA 211

[Close]

BLAST of Csor.00g040400 vs. ExPASy TrEMBL
Match: A0A6J1H3L5 (uncharacterized protein LOC111459709 OS=Cucurbita moschata OX=3662 GN=LOC111459709 PE=4 SV=1)

HSP 1 Score: 405 bits (1040), Expect = 1.68e-142
Identity = 204/205 (99.51%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ 60
           MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ
Sbjct: 7   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ 66

Query: 61  LIINVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 120
           LIINVSSGCICCKRSPNPSNPNWKIAL+SFVISWFSFVIAFLLLLTGAALNDQHGGGTMY
Sbjct: 67  LIINVSSGCICCKRSPNPSNPNWKIALMSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 126

Query: 121 FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 180
           FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ
Sbjct: 127 FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 186

Query: 181 PQFPPQNTQQPVFVHEDVYARRQYA 205
           PQFPPQNTQQPVFVHEDVYARRQYA
Sbjct: 187 PQFPPQNTQQPVFVHEDVYARRQYA 211

[Close]

BLAST of Csor.00g040400 vs. ExPASy TrEMBL
Match: A0A6J1K7C7 (uncharacterized protein LOC111490852 OS=Cucurbita maxima OX=3661 GN=LOC111490852 PE=4 SV=1)

HSP 1 Score: 400 bits (1029), Expect = 8.01e-141
Identity = 203/205 (99.02%), Postives = 204/205 (99.51%), Query Frame = 0


Query: 1   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ 60
           MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ
Sbjct: 7   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ 66

Query: 61  LIINVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 120
           LIINVSSGCICCKRSPNPSNPNWKIAL+SFVISWFSFVIAFLLLLTGAALNDQHGGGTMY
Sbjct: 67  LIINVSSGCICCKRSPNPSNPNWKIALVSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 126

Query: 121 FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 180
           FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ
Sbjct: 127 FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 186

Query: 181 PQFPPQNTQQPVFVHEDVYARRQYA 205
           PQF PQNTQQPVFVHEDVYARRQYA
Sbjct: 187 PQFLPQNTQQPVFVHEDVYARRQYA 211

[Close]

BLAST of Csor.00g040400 vs. ExPASy TrEMBL
Match: A0A6J1I3K6 (uncharacterized protein LOC111468857 OS=Cucurbita maxima OX=3661 GN=LOC111468857 PE=4 SV=1)

HSP 1 Score: 396 bits (1017), Expect = 5.41e-139
Identity = 196/204 (96.08%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ 60
           +VCS+VGLLGILS+VT FVAEATRIKGSQVQF+STSECAYPRSPAMGLGLTAAISLLIAQ
Sbjct: 7   VVCSIVGLLGILSSVTAFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQ 66

Query: 61  LIINVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 120
           LI+NVSSGCICCKRSPNPSNPNWK+ALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY
Sbjct: 67  LIVNVSSGCICCKRSPNPSNPNWKVALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 126

Query: 121 FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 180
           FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ
Sbjct: 127 FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 186

Query: 181 PQFPPQNTQQPVFVHEDVYARRQY 204
           PQFPPQNTQQPVFVHED YARRQY
Sbjct: 187 PQFPPQNTQQPVFVHEDTYARRQY 210

[Close]

BLAST of Csor.00g040400 vs. ExPASy TrEMBL
Match: A0A0A0KRK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168970 PE=4 SV=1)

HSP 1 Score: 394 bits (1013), Expect = 2.20e-138
Identity = 197/205 (96.10%), Postives = 201/205 (98.05%), Query Frame = 0


Query: 1   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ 60
           +VCSVVGLLGILSAVTGFVAEATRIKGSQVQF+STSECAYPRSPAMGLGLTAAISLLIAQ
Sbjct: 7   VVCSVVGLLGILSAVTGFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQ 66

Query: 61  LIINVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 120
           LI+NVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY
Sbjct: 67  LIVNVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 126

Query: 121 FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 180
           FGNYYYYCYVVKPGVFAGGA+LS ASVLLAIVYYLTLNLAKNNSPLWGN  PAQGIALGQ
Sbjct: 127 FGNYYYYCYVVKPGVFAGGAILSLASVLLAIVYYLTLNLAKNNSPLWGNSAPAQGIALGQ 186

Query: 181 PQFPPQNTQQPVFVHEDVYARRQYA 205
           PQFPPQNTQQPVFVHED YARRQYA
Sbjct: 187 PQFPPQNTQQPVFVHEDTYARRQYA 211

[Close]

BLAST of Csor.00g040400 vs. ExPASy TrEMBL
Match: A0A1S3CT83 (uncharacterized protein LOC103504685 OS=Cucumis melo OX=3656 GN=LOC103504685 PE=4 SV=1)

HSP 1 Score: 393 bits (1010), Expect = 6.32e-138
Identity = 196/205 (95.61%), Postives = 201/205 (98.05%), Query Frame = 0


Query: 1   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFVSTSECAYPRSPAMGLGLTAAISLLIAQ 60
           +VCSVVGLLGILSAVTGFVAEATRIKGSQVQF+STSECAYPRSPAMGLGLTAAISLLIAQ
Sbjct: 7   VVCSVVGLLGILSAVTGFVAEATRIKGSQVQFISTSECAYPRSPAMGLGLTAAISLLIAQ 66

Query: 61  LIINVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 120
           LI+NVSSGCICC+RSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY
Sbjct: 67  LIVNVSSGCICCRRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTMY 126

Query: 121 FGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIALGQ 180
           FGNYYYYCYVVKPGVFAGGA+LS ASVLLAIVYYLTLNLAK NSPLWGNPVPAQGIALGQ
Sbjct: 127 FGNYYYYCYVVKPGVFAGGAILSLASVLLAIVYYLTLNLAKTNSPLWGNPVPAQGIALGQ 186

Query: 181 PQFPPQNTQQPVFVHEDVYARRQYA 205
           P FPPQNTQQPVFVHED YARRQYA
Sbjct: 187 PPFPPQNTQQPVFVHEDTYARRQYA 211

[Close]

BLAST of Csor.00g040400 vs. TAIR 10
Match: AT5G17210.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 218.4 bits (555), Expect = 5.4e-57
Identity = 115/207 (55.56%), Postives = 148/207 (71.50%), Query Frame = 0


Query: 1   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQFV---STSECAYPRSPAMGLGLTAAISLL 60
           ++C V+ LLG+LSAVT FVAEATRIK SQV      S ++C YPRSPA  LG T+A+ L+
Sbjct: 7   VMCGVLFLLGLLSAVTAFVAEATRIKRSQVTVTVSDSITKCTYPRSPAFNLGFTSALFLM 66

Query: 61  IAQLIINVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGG 120
           +AQ+I++VSSGC CC++ P PS  NW I+L+ FV+SWF+FVIAFL+LL+GAALND+H   
Sbjct: 67  MAQIIVSVSSGCFCCRKGPAPSRSNWIISLICFVVSWFTFVIAFLVLLSGAALNDEHTEE 126

Query: 121 TMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSPLWGNPVPAQGIA 180
           +M  G   Y+CY+VKPGVF+ GAVLS  ++ L IVYYL   L  N   +        GIA
Sbjct: 127 SMNAGT--YFCYIVKPGVFSTGAVLSLVTIALGIVYYLC--LTSNKQIVAATTTQGTGIA 186

Query: 181 LGQPQFPPQNTQQPVFVHEDVYARRQY 205
           +GQPQ  P+  + PVFVHED Y RRQ+
Sbjct: 187 MGQPQI-PERVEDPVFVHEDTYMRRQF 208

[Close]

BLAST of Csor.00g040400 vs. TAIR 10
Match: AT5G17210.2 (Protein of unknown function (DUF1218) )

HSP 1 Score: 188.0 bits (476), Expect = 7.8e-48
Identity = 93/171 (54.39%), Postives = 122/171 (71.35%), Query Frame = 0


Query: 34  STSECAYPRSPAMGLGLTAAISLLIAQLIINVSSGCICCKRSPNPSNPNWKIALLSFVIS 93
           S ++C YPRSPA  LG T+A+ L++AQ+I++VSSGC CC++ P PS  NW I+L+ FV+S
Sbjct: 9   SITKCTYPRSPAFNLGFTSALFLMMAQIIVSVSSGCFCCRKGPAPSRSNWIISLICFVVS 68

Query: 94  WFSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVY 153
           WF+FVIAFL+LL+GAALND+H   +M  G   Y+CY+VKPGVF+ GAVLS  ++ L IVY
Sbjct: 69  WFTFVIAFLVLLSGAALNDEHTEESMNAGT--YFCYIVKPGVFSTGAVLSLVTIALGIVY 128

Query: 154 YLTLNLAKNNSPLWGNPVPAQGIALGQPQFPPQNTQQPVFVHEDVYARRQY 205
           YL   L  N   +        GIA+GQPQ  P+  + PVFVHED Y RRQ+
Sbjct: 129 YLC--LTSNKQIVAATTTQGTGIAMGQPQI-PERVEDPVFVHEDTYMRRQF 174

[Close]

BLAST of Csor.00g040400 vs. TAIR 10
Match: AT1G61065.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-16
Identity = 50/131 (38.17%), Postives = 76/131 (58.02%), Query Frame = 0


Query: 36  SECAYPRSPAMGLGLTAAISLLIAQLIINVSSGCICCKRSPNPS-NPNWKIALLSFVISW 95
           S C Y +  A GLG+ + + LL +QL+I V+S C+CC R+  PS + +W I L  F+ +W
Sbjct: 41  SYCVYDKDIATGLGVGSFLVLLASQLLIMVASRCLCCGRALTPSGSRSWAIFL--FITTW 100

Query: 96  FSFVIAFLLLLTGAALNDQHGGGTMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYY 155
             F IA + LL G+  N  H    +YFGN    C  ++ GVF  GA     + +++ +YY
Sbjct: 101 VFFFIAQVCLLAGSVRNAYHTKYRVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYY 160

Query: 156 LTLNLAKNNSP 166
           +TL+ AK+  P
Sbjct: 161 VTLSRAKDFQP 169

[Close]

BLAST of Csor.00g040400 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 62.4 bits (150), Expect = 4.9e-10
Identity = 46/168 (27.38%), Postives = 83/168 (49.40%), Query Frame = 0


Query: 1   MVCSVVGLLGILSAVTGFVAEATRIKGSQVQ--FVSTSECAYPRSPAMGLGLTAAISLLI 60
           +V  +V  L +++      AE  R  G  +Q    +T+ C Y    A G G+ A + LL 
Sbjct: 9   LVFILVVALSLVAFGFSIAAERRRSIGKSIQDPITNTTFCVYDSDVATGYGVGAFLFLLS 68

Query: 61  AQLIINVSSGCICCKRSPNP-SNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGG 120
           ++ ++   + C+C  R   P S+  W I  + F+ SW +F++A   ++ GA  N  H   
Sbjct: 69  SESLLMSVTKCMCFGRPLAPGSDRAWSI--IYFISSWMTFLVAEACVIAGATKNAYH--- 128

Query: 121 TMYFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYLTLNLAKNNSP 166
           T Y  +  + C  ++ G+F  GAV   A+++L + YY+    + ++ P
Sbjct: 129 TKYLSSQTFSCASLRKGIFIAGAVFIVATMVLNVYYYMYFTKSVSSPP 171

[Close]

BLAST of Csor.00g040400 vs. TAIR 10
Match: AT1G68220.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 62.0 bits (149), Expect = 6.4e-10
Identity = 48/156 (30.77%), Postives = 75/156 (48.08%), Query Frame = 0


Query: 2   VCSVVGLLGILSAVTGFVAEATRIKGSQV--QFVSTSECAYPRSPAMGLGLTAAISLLIA 61
           + +VV  L +L+ V  F AE  R     V  Q+   + C Y    +   G++A   LL++
Sbjct: 7   ILTVVTALHLLAFVFAFGAERRRSTAVPVPDQYDEKTICKYGTEASTVYGMSAFGLLLVS 66

Query: 62  QLIINVSSGCICCKRSPNPSNPNWKIALLSFVISWFSFVIAFLLLLTGAALNDQHGGGTM 121
           Q ++N  + C+C  +           A++ FV+SW SF+ A   LL G+A N  H     
Sbjct: 67  QAVVNGVTKCLCFGKGLVTGTSYTVWAIVFFVVSWVSFLGAEACLLGGSARNAYHTKSEG 126

Query: 122 YFGNYYYYCYVVKPGVFAGGAVLSFASVLLAIVYYL 156
            +      C V+  GVFA GA  +  S++  I+YYL
Sbjct: 127 IYKGKELSCAVLPVGVFAAGAAFTLMSLIATILYYL 162

The following BLAST results are available for this feature:

BLAST of Csor.00g040400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65708	5.0e-07	28.67	Protein MODIFYING WALL LIGNIN-2 OS=Arabidopsis thaliana OX=3702 GN=MWL2 PE=2 SV=...	[more]
A2RVU1	7.2e-06	28.17	Protein MODIFYING WALL LIGNIN-1 OS=Arabidopsis thaliana OX=3702 GN=MWL1 PE=1 SV=...	[more]

BLAST of Csor.00g040400 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605662.1	1.39e-142	100.00	Protein MODIFYING WALL LIGNIN-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023532125.1	1.72e-142	100.00	uncharacterized protein LOC111794385 [Cucurbita pepo subsp. pepo]	[more]
XP_022958500.1	3.48e-142	99.51	uncharacterized protein LOC111459709 [Cucurbita moschata]	[more]
XP_022995248.1	1.65e-140	99.02	uncharacterized protein LOC111490852 [Cucurbita maxima]	[more]
XP_038874324.1	4.74e-140	97.56	uncharacterized protein LOC120067025 [Benincasa hispida]	[more]

BLAST of Csor.00g040400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3L5	1.68e-142	99.51	uncharacterized protein LOC111459709 OS=Cucurbita moschata OX=3662 GN=LOC1114597...	[more]
A0A6J1K7C7	8.01e-141	99.02	uncharacterized protein LOC111490852 OS=Cucurbita maxima OX=3661 GN=LOC111490852...	[more]
A0A6J1I3K6	5.41e-139	96.08	uncharacterized protein LOC111468857 OS=Cucurbita maxima OX=3661 GN=LOC111468857...	[more]
A0A0A0KRK6	2.20e-138	96.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G168970 PE=4 SV=1	[more]
A0A1S3CT83	6.32e-138	95.61	uncharacterized protein LOC103504685 OS=Cucumis melo OX=3656 GN=LOC103504685 PE=...	[more]

BLAST of Csor.00g040400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17210.1	5.4e-57	55.56	Protein of unknown function (DUF1218)	[more]
AT5G17210.2	7.8e-48	54.39	Protein of unknown function (DUF1218)	[more]
AT1G61065.1	1.6e-16	38.17	Protein of unknown function (DUF1218)	[more]
AT1G13380.1	4.9e-10	27.38	Protein of unknown function (DUF1218)	[more]
AT1G68220.1	6.4e-10	30.77	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 52..148 e-value: 7.4E-29 score: 100.1
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 1..191
None	No IPR available	PANTHER	PTHR31769:SF59	PROTEIN, PUTATIVE (DUF1218)-RELATED	coord: 1..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g040400.m01	Csor.00g040400.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane