Csor.00g039790 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g039790
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	remorin-like
Location	Csor_Chr02: 6615661 .. 6617067 (-)
RNA-Seq Expression	Csor.00g039790
Synteny	Csor.00g039790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGACGCTTCCAACAACCCCGTATCGGCGGCGCCACCCTCCAATCCTCCGCCGCAGCCGGCCGAAGAAGAAGCCCCCAAAGACGTCGCCGAGGAGAAAGCTGTAATTCCACCGCCCCCTCCACCCGTCGAAGACAAACCCGACGACTCCAAAGCCCTTGTTCTAGTTGAAAGTAAATAATCAACAAACCCACCTTTTATTTCATGTGTTTTACATAAATCCGTTGTTAATTTTCAGCTCAGAGTTGAATTTAGGGCTTTTTAATCGATTATCTTGCTCTGTTATTCTCTGTGTTCTGTTCTTGTGTTCTTCAGAGGTTTCAGAACCAGATGAACCCAAATCCACTGAGGGCTCTGTAAACAGAGGTTTTAATTACAAAAACCCTTAATTATTTTCTTAATTATTGTTTGTTTCAATGAAATTTAAGAATTAATTTAATTGTTCAGATGCTGTTCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCGCTGATTAAAGCTTGGGAAGAAAGCGAGAAATCAAAGGCTGAAAACAAGTAAGATTGTGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATACCAATGGAGATAGTATTCCCCACTTATAAACCCTTTTCCACTAAATTAACCAATGTGGGACACTCCCAATCCCAAAATCCTTCGAACAAAGCACACAGAGCTTATGGAGAATAGCCTCCCCTTAATTGAGGCTCGACTCCTTTCTCTGATTAAAAAGTACACCATTTGTTCGACATGTTAGGACTAGAAAGGCTCGCCATTCTTTGTTCGAGAAATTCTATTGGCATGGTTAAGGGCATGGCTCTGATACCATGTTGAATCAACTCTCCACAAAGTATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCAAAAGGTTTCATTTCCCCCTCACCATTCTCCCAATCTTCGATTTTCGTTTTGAAATTGAAATTCACTGAAACCCCTTTGAGCAGAGCTCACAAGAAGCTGTCCTCTGTCGTGGCATGGGAGAATAGCAGAAAAGCGTCTGTGGAGGCTGAGTTGAAGAAGATTGAGGTACCCATTGCTCTGTTCGGCTACCCATTTTGGGTGTCTTTTTTGGGGTTTGGTTAACTGTACGGAAATTTGATTTGCAGGAAAGCTTGGAGAAGAAGAAGGCTGAATACGTTGAGAAAATGAACAACAGAATTGCTCTGCTTCACAAATCTGCGGAGGAGAAGAGGGCGGTGATCGAAGCTATGCGCGGAGAAGATCTTCTGAAGGCGGAGGAGACGGCGGCGAAGTATCGCGCCACTGGTACTGCACCGAAGAAGCTTTTTGGGTGCTTTTAG

mRNA sequence

ATGGCTGACGCTTCCAACAACCCCGTATCGGCGGCGCCACCCTCCAATCCTCCGCCGCAGCCGGCCGAAGAAGAAGCCCCCAAAGACGTCGCCGAGGAGAAAGCTGTAATTCCACCGCCCCCTCCACCCGTCGAAGACAAACCCGACGACTCCAAAGCCCTTGTTCTAGTTGAAAAGGTTTCAGAACCAGATGAACCCAAATCCACTGAGGGCTCTGTAAACAGAGATGCTGTTCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCGCTGATTAAAGCTTGGGAAGAAAGCGAGAAATCAAAGGCTGAAAACAAAGCTCACAAGAAGCTGTCCTCTGTCGTGGCATGGGAGAATAGCAGAAAAGCGTCTGTGGAGGCTGAGTTGAAGAAGATTGAGGAAAGCTTGGAGAAGAAGAAGGCTGAATACGTTGAGAAAATGAACAACAGAATTGCTCTGCTTCACAAATCTGCGGAGGAGAAGAGGGCGGTGATCGAAGCTATGCGCGGAGAAGATCTTCTGAAGGCGGAGGAGACGGCGGCGAAGTATCGCGCCACTGGTACTGCACCGAAGAAGCTTTTTGGGTGCTTTTAG

Coding sequence (CDS)

ATGGCTGACGCTTCCAACAACCCCGTATCGGCGGCGCCACCCTCCAATCCTCCGCCGCAGCCGGCCGAAGAAGAAGCCCCCAAAGACGTCGCCGAGGAGAAAGCTGTAATTCCACCGCCCCCTCCACCCGTCGAAGACAAACCCGACGACTCCAAAGCCCTTGTTCTAGTTGAAAAGGTTTCAGAACCAGATGAACCCAAATCCACTGAGGGCTCTGTAAACAGAGATGCTGTTCTAGCAAAAGTTGCAACAGAGAAGAGGTTGTCGCTGATTAAAGCTTGGGAAGAAAGCGAGAAATCAAAGGCTGAAAACAAAGCTCACAAGAAGCTGTCCTCTGTCGTGGCATGGGAGAATAGCAGAAAAGCGTCTGTGGAGGCTGAGTTGAAGAAGATTGAGGAAAGCTTGGAGAAGAAGAAGGCTGAATACGTTGAGAAAATGAACAACAGAATTGCTCTGCTTCACAAATCTGCGGAGGAGAAGAGGGCGGTGATCGAAGCTATGCGCGGAGAAGATCTTCTGAAGGCGGAGGAGACGGCGGCGAAGTATCGCGCCACTGGTACTGCACCGAAGAAGCTTTTTGGGTGCTTTTAG

Protein sequence

MADASNNPVSAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKVSEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYRATGTAPKKLFGCF

Homology

[Close]

BLAST of Csor.00g039790 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.2e-57
Identity = 139/201 (69.15%), Postives = 162/201 (80.60%), Query Frame = 0


Query: 1   MADASNNPVSAAPPSNPPPQPAEEEAPKD-VAEEKAVIPPP-PPPVE--DKPDDSKALVL 60
           MA+     V    P+  PP P   EAPK+ VA+EKA++ P  PPP E  +KPDDSKALV+
Sbjct: 1   MAELEAKKVEIVDPA--PPAPGPVEAPKEVVADEKAIVAPALPPPAEEKEKPDDSKALVV 60

Query: 61  VE-KVSEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVA 120
           VE K  EP + K  EGS++RDAVLA+VATEKR+SLIKAWEESEKSKAENKA KK+S++ A
Sbjct: 61  VETKAPEPADEKK-EGSIDRDAVLARVATEKRVSLIKAWEESEKSKAENKAQKKVSAIGA 120

Query: 121 WENSRKASVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKA 180
           WENS+KA++EAELKK+EE LEKKKAEY EKM N+IALLHK AEEKRA+IEA RGEDLLKA
Sbjct: 121 WENSKKANLEAELKKMEEQLEKKKAEYTEKMKNKIALLHKEAEEKRAMIEAKRGEDLLKA 180

Query: 181 EETAAKYRATGTAPKKLFGCF 197
           EE AAKYRATGTAPKK+ G F
Sbjct: 181 EELAAKYRATGTAPKKILGIF 198

[Close]

BLAST of Csor.00g039790 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.8e-51
Identity = 126/192 (65.62%), Postives = 151/192 (78.65%), Query Frame = 0


Query: 10  SAAPPSNPPPQPAEE-EAPKDVA-EEKAVIPPP----PPPVEDKPDDSKALVLVEKVSEP 69
           + + P+  P  P E+  A  DVA +EK V PPP    P P E+K +DSKA+V V  V + 
Sbjct: 12  TVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPV--VPKE 71

Query: 70  DEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKAS 129
            E +  EGSVNRDAVLA+V TEKR+SLIKAWEE+EK K ENKA KKLSS+ +WEN++KA+
Sbjct: 72  VEEEKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAA 131

Query: 130 VEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYR 189
           VEAELKK+EE LEKKKAEYVE+M N+IA +HK AEEKRA+IEA RGE++LKAEE AAKYR
Sbjct: 132 VEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYR 191

Query: 190 ATGTAPKKLFGC 196
           ATGTAPKKLFGC
Sbjct: 192 ATGTAPKKLFGC 201

[Close]

BLAST of Csor.00g039790 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 8.5e-49
Identity = 121/196 (61.73%), Postives = 140/196 (71.43%), Query Frame = 0


Query: 12  APPSNPPPQPAEEEAP----------KDVAEEKAVIPPPPPPVEDKPDDSKALVLVEK-V 71
           AP   P P PAE  AP          KDVAEEK   PPP    E   DDSKAL +VEK V
Sbjct: 21  APADTPAPAPAEIPAPAPAPTPADVTKDVAEEKIQNPPP----EQIFDDSKALTVVEKPV 80

Query: 72  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 131
            EP   K    S++RD  LA ++ EKRLS ++AWEESEKSKAENKA KK++ V AWENS+
Sbjct: 81  EEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSK 140

Query: 132 KASVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 191
           KA+VEA+LKKIEE LEKKKAEY E+M N++A +HK AEE+RA+IEA RGED+LKAEETAA
Sbjct: 141 KAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAA 200

Query: 192 KYRATGTAPKKLFGCF 197
           KYRATG  PK   GCF
Sbjct: 201 KYRATGIVPKATCGCF 212

[Close]

BLAST of Csor.00g039790 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.4e-43
Identity = 109/191 (57.07%), Postives = 134/191 (70.16%), Query Frame = 0


Query: 7   NPVSAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKVSEPDEP 66
           +P   AP   P P      AP +VA+EK   PPP         +SKAL +VEK  E   P
Sbjct: 14  SPAVLAPAKEPTP------APVEVADEKIHNPPPV--------ESKALAVVEKPIEEHTP 73

Query: 67  -KSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASVE 126
            K++ GS +RD +LA +  EK+ S IKAWEESEKSKAEN+A KK+S V AWENS+KA+VE
Sbjct: 74  KKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVE 133

Query: 127 AELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYRAT 186
           A+L+KIEE LEKKKA+Y EKM N++A +HK AEEKRA++EA +GE+LLKAEE  AKYRAT
Sbjct: 134 AQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRAT 190

Query: 187 GTAPKKLFGCF 197
           G  PK   GCF
Sbjct: 194 GVVPKATCGCF 190

[Close]

BLAST of Csor.00g039790 vs. ExPASy Swiss-Prot
Match: Q7XII4 (Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-06
Identity = 55/185 (29.73%), Postives = 80/185 (43.24%), Query Frame = 0


Query: 7   NPVSAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKVSEPDEP 66
           NP++  P SNP P P            +A +  P                      P + 
Sbjct: 160 NPLAIVPDSNPIPSP-----------RRAHLALP---------------------APGDV 219

Query: 67  KSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASVEA 126
            S  G    +  + +V  E+  S I AW+ +E +K  N+  ++   +  WE  +     A
Sbjct: 220 SSAGGGHGDEVSVGQVKKEEVESKIAAWQIAEVAKVNNRFKREEVVINGWEGDQVEKANA 279

Query: 127 ELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYRATG 186
            LKK E  LE+K+A+ +EK  N +A   + AEEKRA  EA RG  + +  E A   RA G
Sbjct: 280 WLKKYERKLEEKRAKAMEKAQNEVAKARRKAEEKRASAEAKRGTKVARVLELANFMRAVG 312

Query: 187 TAPKK 192
            AP K
Sbjct: 340 RAPSK 312

[Close]

BLAST of Csor.00g039790 vs. NCBI nr
Match: KAG6605721.1 (hypothetical protein SDJN03_03038, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 353 bits (906), Expect = 3.80e-122
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MADASNNPVSAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNPVSAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV
Sbjct: 1   MADASNNPVSAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 196
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of Csor.00g039790 vs. NCBI nr
Match: KAG7035629.1 (hypothetical protein SDJN02_02427 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350 bits (897), Expect = 8.95e-121
Identity = 194/196 (98.98%), Postives = 195/196 (99.49%), Query Frame = 0


Query: 1   MADASNNPVSAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNPV+AAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV
Sbjct: 1   MADASNNPVTAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKM NRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 196
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of Csor.00g039790 vs. NCBI nr
Match: XP_023532341.1 (remorin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 348 bits (894), Expect = 2.56e-120
Identity = 194/196 (98.98%), Postives = 194/196 (98.98%), Query Frame = 0


Query: 1   MADASNNPVSAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNP SAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKM NRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 196
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of Csor.00g039790 vs. NCBI nr
Match: XP_022957725.1 (remorin-like [Cucurbita moschata])

HSP 1 Score: 345 bits (886), Expect = 4.25e-119
Identity = 193/196 (98.47%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 1   MADASNNPVSAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNP SAAPPSNPPPQPAEEEA KDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKM NRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 196
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of Csor.00g039790 vs. NCBI nr
Match: XP_022995196.1 (remorin-like [Cucurbita maxima])

HSP 1 Score: 340 bits (872), Expect = 5.78e-117
Identity = 190/196 (96.94%), Postives = 191/196 (97.45%), Query Frame = 0


Query: 1   MADASNNPVSAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNP SAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALV VE+ 
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVPVEQY 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKM NRIALLHKSAEEKRAVIEAMRGEDLLKAEE AA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEEMAA 180

Query: 181 KYRATGTAPKKLFGCF 196
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of Csor.00g039790 vs. ExPASy TrEMBL
Match: A0A6J1H1B9 (remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111459182 PE=3 SV=1)

HSP 1 Score: 345 bits (886), Expect = 2.06e-119
Identity = 193/196 (98.47%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 1   MADASNNPVSAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNP SAAPPSNPPPQPAEEEA KDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEASKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKM NRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 196
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of Csor.00g039790 vs. ExPASy TrEMBL
Match: A0A6J1K1B5 (remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111490815 PE=3 SV=1)

HSP 1 Score: 340 bits (872), Expect = 2.80e-117
Identity = 190/196 (96.94%), Postives = 191/196 (97.45%), Query Frame = 0


Query: 1   MADASNNPVSAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MADASNNP SAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALV VE+ 
Sbjct: 1   MADASNNPESAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVPVEQY 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
           SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR
Sbjct: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKKAEYVEKM NRIALLHKSAEEKRAVIEAMRGEDLLKAEE AA
Sbjct: 121 KASVEAELKKIEESLEKKKAEYVEKMKNRIALLHKSAEEKRAVIEAMRGEDLLKAEEMAA 180

Query: 181 KYRATGTAPKKLFGCF 196
           KYRATGTAPKKLFGCF
Sbjct: 181 KYRATGTAPKKLFGCF 196

[Close]

BLAST of Csor.00g039790 vs. ExPASy TrEMBL
Match: A0A1S3CPW1 (remorin OS=Cucumis melo OX=3656 GN=LOC103503454 PE=3 SV=1)

HSP 1 Score: 281 bits (720), Expect = 3.61e-94
Identity = 164/196 (83.67%), Postives = 174/196 (88.78%), Query Frame = 0


Query: 1   MADASNNPVSAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKV 60
           MA+ S   + + PPS+PPP P EE  PKDVAEEK+VIPPPP   EDK DDSKALVLVEKV
Sbjct: 1   MAEESKK-IESPPPSDPPPPPPEE-LPKDVAEEKSVIPPPP---EDKTDDSKALVLVEKV 60

Query: 61  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 120
            E  +PKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSV AWENS+
Sbjct: 61  PEVADPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVAAWENSK 120

Query: 121 KASVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 180
           KASVEAELKKIEESLEKKK EY+EKM N+IALLHKSAEEKRA+IEA RGEDLLKAEETAA
Sbjct: 121 KASVEAELKKIEESLEKKKGEYIEKMKNKIALLHKSAEEKRAIIEAKRGEDLLKAEETAA 180

Query: 181 KYRATGTAPKKLFGCF 196
           KYRATGTAPKKL GCF
Sbjct: 181 KYRATGTAPKKLLGCF 191

[Close]

BLAST of Csor.00g039790 vs. ExPASy TrEMBL
Match: A0A6J1DYY5 (remorin-like OS=Momordica charantia OX=3673 GN=LOC111025889 PE=3 SV=1)

HSP 1 Score: 280 bits (717), Expect = 9.64e-94
Identity = 164/199 (82.41%), Postives = 172/199 (86.43%), Query Frame = 0


Query: 1   MADASNNPVSAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPP--VEDKP-DDSKALVLV 60
           MA+ S NP S  PP+        EE PKDVAEEK VIPPPPPP   EDKP DDSKALVLV
Sbjct: 1   MAEESKNPESTPPPA--------EEVPKDVAEEKTVIPPPPPPPPAEDKPADDSKALVLV 60

Query: 61  EKVSEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWE 120
           EKV E  EPKS EGSVNRD VLAKVATEKR+SLIKAWEESEKSKAENKAHKKLSSVVAWE
Sbjct: 61  EKVPEAAEPKSAEGSVNRDTVLAKVATEKRMSLIKAWEESEKSKAENKAHKKLSSVVAWE 120

Query: 121 NSRKASVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEE 180
           NS+KASVEAELKKIEESLEKKKAEY+EKM N+IALLHK+AEEKRA+IEA RGEDLLKAEE
Sbjct: 121 NSKKASVEAELKKIEESLEKKKAEYIEKMKNKIALLHKTAEEKRAIIEAKRGEDLLKAEE 180

Query: 181 TAAKYRATGTAPKKLFGCF 196
           TAAKYRATGTAPKKL GCF
Sbjct: 181 TAAKYRATGTAPKKLLGCF 191

[Close]

BLAST of Csor.00g039790 vs. ExPASy TrEMBL
Match: A0A6J1GJE1 (remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111454820 PE=3 SV=1)

HSP 1 Score: 271 bits (694), Expect = 4.02e-90
Identity = 158/192 (82.29%), Postives = 167/192 (86.98%), Query Frame = 0


Query: 13  PPSNPPPQPAEEEAPKDVAEEKAVIPPPPP--------PVEDKPDDSKALVLVEKVSEPD 72
           PPS+PPP P +E  PKDVAEEK VIPPPPP        P E K DDSKALVLVEKV E  
Sbjct: 7   PPSDPPPPPPQE-LPKDVAEEKTVIPPPPPSAPVPAPTPAEHKTDDSKALVLVEKVPEAG 66

Query: 73  EPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASV 132
           E KS+EGSVNRDAVLAKVATEKR+SLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASV
Sbjct: 67  EAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASV 126

Query: 133 EAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYRA 192
           EAELKKIEE+LEKKKAEY+EKM N+IALLHK AEEKRA+IEA RGE+LLKAEETAAKYRA
Sbjct: 127 EAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKYRA 186

Query: 193 TGTAPKKLFGCF 196
           TGTAPKKL  CF
Sbjct: 187 TGTAPKKLLSCF 197

[Close]

BLAST of Csor.00g039790 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein )

HSP 1 Score: 204.1 bits (518), Expect = 1.0e-52
Identity = 127/193 (65.80%), Postives = 152/193 (78.76%), Query Frame = 0


Query: 10  SAAPPSNPPPQPAEE-EAPKDVA-EEKAVIPPP----PPPVEDKPDDSKALV-LVEKVSE 69
           + + P+  P  P E+  A  DVA +EK V PPP    P P E+K +DSKA+V +V KV E
Sbjct: 12  TVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPVVPKVEE 71

Query: 70  PDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKA 129
               +  EGSVNRDAVLA+V TEKR+SLIKAWEE+EK K ENKA KKLSS+ +WEN++KA
Sbjct: 72  ----EKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKA 131

Query: 130 SVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKY 189
           +VEAELKK+EE LEKKKAEYVE+M N+IA +HK AEEKRA+IEA RGE++LKAEE AAKY
Sbjct: 132 AVEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKY 191

Query: 190 RATGTAPKKLFGC 196
           RATGTAPKKLFGC
Sbjct: 192 RATGTAPKKLFGC 200

[Close]

BLAST of Csor.00g039790 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein )

HSP 1 Score: 203.8 bits (517), Expect = 1.3e-52
Identity = 126/192 (65.62%), Postives = 151/192 (78.65%), Query Frame = 0


Query: 10  SAAPPSNPPPQPAEE-EAPKDVA-EEKAVIPPP----PPPVEDKPDDSKALVLVEKVSEP 69
           + + P+  P  P E+  A  DVA +EK V PPP    P P E+K +DSKA+V V  V + 
Sbjct: 12  TVSEPTPTPEVPVEKPAAAADVAPQEKPVAPPPVLPSPAPAEEKQEDSKAIVPV--VPKE 71

Query: 70  DEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKAS 129
            E +  EGSVNRDAVLA+V TEKR+SLIKAWEE+EK K ENKA KKLSS+ +WEN++KA+
Sbjct: 72  VEEEKKEGSVNRDAVLARVETEKRMSLIKAWEEAEKCKVENKAEKKLSSIGSWENNKKAA 131

Query: 130 VEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYR 189
           VEAELKK+EE LEKKKAEYVE+M N+IA +HK AEEKRA+IEA RGE++LKAEE AAKYR
Sbjct: 132 VEAELKKMEEQLEKKKAEYVEQMKNKIAQIHKEAEEKRAMIEAKRGEEILKAEELAAKYR 191

Query: 190 ATGTAPKKLFGC 196
           ATGTAPKKLFGC
Sbjct: 192 ATGTAPKKLFGC 201

[Close]

BLAST of Csor.00g039790 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein )

HSP 1 Score: 198.0 bits (502), Expect = 7.2e-51
Identity = 116/173 (67.05%), Postives = 132/173 (76.30%), Query Frame = 0


Query: 24  EEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKVSEPDEPKSTEGSVNRDAVLAKVA 83
           EE  K +  E     P PP  E+K DDSKA+VLV    EP E K   GSV+RDAVL ++ 
Sbjct: 4   EEQKKVIMPEAVASEPSPPSKEEKSDDSKAIVLVVAAKEPTEDKKV-GSVHRDAVLVRLE 63

Query: 84  TEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASVEAELKKIEESLEKKKAEYV 143
            +KR+SLIKAWEE+EKSK ENKA KK+SSV AWENS+KASVEAELKKIEE L KKKA Y 
Sbjct: 64  QDKRISLIKAWEEAEKSKVENKAQKKISSVGAWENSKKASVEAELKKIEEQLNKKKAHYT 123

Query: 144 EKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYRATGTAPKKLFGCF 197
           E+M N+IA +HK AEEKRA+ EA RGED+LKAEE AAKYRATGTAP KLFG F
Sbjct: 124 EQMKNKIAQIHKEAEEKRAMTEAKRGEDVLKAEEMAAKYRATGTAPTKLFGFF 175

[Close]

BLAST of Csor.00g039790 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein )

HSP 1 Score: 194.9 bits (494), Expect = 6.1e-50
Identity = 121/196 (61.73%), Postives = 140/196 (71.43%), Query Frame = 0


Query: 12  APPSNPPPQPAEEEAP----------KDVAEEKAVIPPPPPPVEDKPDDSKALVLVEK-V 71
           AP   P P PAE  AP          KDVAEEK   PPP    E   DDSKAL +VEK V
Sbjct: 21  APADTPAPAPAEIPAPAPAPTPADVTKDVAEEKIQNPPP----EQIFDDSKALTVVEKPV 80

Query: 72  SEPDEPKSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSR 131
            EP   K    S++RD  LA ++ EKRLS ++AWEESEKSKAENKA KK++ V AWENS+
Sbjct: 81  EEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWENSK 140

Query: 132 KASVEAELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAA 191
           KA+VEA+LKKIEE LEKKKAEY E+M N++A +HK AEE+RA+IEA RGED+LKAEETAA
Sbjct: 141 KAAVEAQLKKIEEQLEKKKAEYAERMKNKVAAIHKEAEERRAMIEAKRGEDVLKAEETAA 200

Query: 192 KYRATGTAPKKLFGCF 197
           KYRATG  PK   GCF
Sbjct: 201 KYRATGIVPKATCGCF 212

[Close]

BLAST of Csor.00g039790 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein )

HSP 1 Score: 177.6 bits (449), Expect = 1.0e-44
Identity = 109/191 (57.07%), Postives = 134/191 (70.16%), Query Frame = 0


Query: 7   NPVSAAPPSNPPPQPAEEEAPKDVAEEKAVIPPPPPPVEDKPDDSKALVLVEKVSEPDEP 66
           +P   AP   P P      AP +VA+EK   PPP         +SKAL +VEK  E   P
Sbjct: 14  SPAVLAPAKEPTP------APVEVADEKIHNPPPV--------ESKALAVVEKPIEEHTP 73

Query: 67  -KSTEGSVNRDAVLAKVATEKRLSLIKAWEESEKSKAENKAHKKLSSVVAWENSRKASVE 126
            K++ GS +RD +LA +  EK+ S IKAWEESEKSKAEN+A KK+S V AWENS+KA+VE
Sbjct: 74  KKASSGSADRDVILADLEKEKKTSFIKAWEESEKSKAENRAQKKISDVHAWENSKKAAVE 133

Query: 127 AELKKIEESLEKKKAEYVEKMNNRIALLHKSAEEKRAVIEAMRGEDLLKAEETAAKYRAT 186
           A+L+KIEE LEKKKA+Y EKM N++A +HK AEEKRA++EA +GE+LLKAEE  AKYRAT
Sbjct: 134 AQLRKIEEKLEKKKAQYGEKMKNKVAAIHKLAEEKRAMVEAKKGEELLKAEEMGAKYRAT 190

Query: 187 GTAPKKLFGCF 197
           G  PK   GCF
Sbjct: 194 GVVPKATCGCF 190

The following BLAST results are available for this feature:

BLAST of Csor.00g039790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93788	2.2e-57	69.15	Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1	[more]
Q9FFA5	1.8e-51	65.63	Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1	[more]
Q9M2D8	8.5e-49	61.73	Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 P...	[more]
O80837	1.4e-43	57.07	Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1	[more]
Q7XII4	1.4e-06	29.73	Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1	[more]

BLAST of Csor.00g039790 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605721.1	3.80e-122	100.00	hypothetical protein SDJN03_03038, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7035629.1	8.95e-121	98.98	hypothetical protein SDJN02_02427 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023532341.1	2.56e-120	98.98	remorin-like [Cucurbita pepo subsp. pepo]	[more]
XP_022957725.1	4.25e-119	98.47	remorin-like [Cucurbita moschata]	[more]
XP_022995196.1	5.78e-117	96.94	remorin-like [Cucurbita maxima]	[more]

BLAST of Csor.00g039790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1B9	2.06e-119	98.47	remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111459182 PE=3 SV=1	[more]
A0A6J1K1B5	2.80e-117	96.94	remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111490815 PE=3 SV=1	[more]
A0A1S3CPW1	3.61e-94	83.67	remorin OS=Cucumis melo OX=3656 GN=LOC103503454 PE=3 SV=1	[more]
A0A6J1DYY5	9.64e-94	82.41	remorin-like OS=Momordica charantia OX=3673 GN=LOC111025889 PE=3 SV=1	[more]
A0A6J1GJE1	4.02e-90	82.29	remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111454820 PE=3 SV=1	[more]

BLAST of Csor.00g039790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23750.2	1.0e-52	65.80	Remorin family protein	[more]
AT5G23750.1	1.3e-52	65.63	Remorin family protein	[more]
AT3G48940.1	7.2e-51	67.05	Remorin family protein	[more]
AT3G61260.1	6.1e-50	61.73	Remorin family protein	[more]
AT2G45820.1	1.0e-44	57.07	Remorin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 121..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..71
None	No IPR available	PANTHER	PTHR31775	OS02G0117200 PROTEIN	coord: 10..196
None	No IPR available	PANTHER	PTHR31775:SF5	REMORIN 1.4	coord: 10..196
IPR005518	Remorin, N-terminal	PFAM	PF03766	Remorin_N	coord: 28..82 e-value: 8.4E-23 score: 80.2
IPR005516	Remorin, C-terminal	PFAM	PF03763	Remorin_C	coord: 86..191 e-value: 1.2E-31 score: 108.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g039790.m01	Csor.00g039790.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010033	response to organic substance
biological_process	GO:1901700	response to oxygen-containing compound
biological_process	GO:0006950	response to stress