Csor.00g039410 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g039410
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	succinate dehydrogenase assembly factor 1, mitochondrial-like
Location	Csor_Chr09: 11946303 .. 11949834 (-)
RNA-Seq Expression	Csor.00g039410
Synteny	Csor.00g039410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATCTCATCGGGGCCGAAGCTCTCAGGGTTGCAAAAGCAAGTGCTCAGTCTATACAGAGCATTTCTTCGAGCAGCTCGTTCCAAATCCGTCGAAGATCGACGGCAAATGGAATCGGTTGTCGCCGCTGAGTTCCGCCGAAACGCCAAGCAAATCGATCGCAAAAATTTCATCCACATCGAGTACCTTCTTCGTCGAGGTAACAAACAGTTGGATCAACTTAAAAGCTCTGCAACCGTTCGAGTATCAAGATTCTGAGCCTTGAGATTGTATGTACATTGCTTCGATTCTTGGCTGTTGTTCTGATTTAATCGATCTTGGATAGATTTTGAACCCTAGAAAATAAACTGCGATTGATTTGCTCTTTCTCCTCTTGAATTCCTGATTTGCAATTTTGTTGGTGGATTCTAAGCGACGAATCGCTCTGTTGATTTGCTCGATACTGAATTTTGTCCTTCATGAACTTGTTTTTCAGCGACGATCAATTTTGCAGAACAGTTCAAGTCGGTGGTAGAATCTTTGAAATGCTTAAAAATGTGGACAATGGATTTTCTTCCTTTGTGAGGTTAAGGTATGAACTTACACTAAATTCTACATTTAACTATCATTATATATATTCTAGATTAGAAGATACTTTTGATCTTTGTAATTTAGAATTTTTTTTTAATTCATTTCAATGTTCAAACATCTGAACTTCAAATCTTAAGAATAAGAAGAAGAAAAAAAGTTCAAATGTTGCAAATTGTACTAATTAAAACCTTAAACTTCCTAACTAAATCTATTTAGACGGATTCATAACTATTTTCTACTAAATTTTATTGCAAAATTACCTAAATAATATCATTCTTTTTCTTCAAAGTAGCGGATGTAGTTCTTCCTAAATAAAAAAACATTGAAGGAGAAAACAAGATAAAAAAATTACAATCGGTATAATCCACTAAATGCTAACAATTCTGTCTATAATTGTGTTAATCCCTACATTTACATTCTTACAAGGGTAAGAATTATGTATTGATAATTTATAGTGAAATCCTAAGCGATATACGGTTTTGTTCAAGCCGAGGGAACACAATTGCCAATTGCAATATGTCGACCACTAAGCAAAGAGTCGTAGATAAAGGTAGAGTTTCATTACCAAGACAACGTTGTGCATGATTGACAACTAAGTCCATAGTCAGTCAAACAAATAGGATTTTTTTTCGCGTGCATAAAAAACTTGTCATGCATGCAAGCATCGACCTTATTTTTAGTAGGAAAATATGGTCGTTACTAAATTATGAAAGTATTATATGCATCATGACCTATGTATCTTGACTTAAAATATGGGACCTCATGCATGTAGTATACAAACACCGGTTACTTCTCTAGTATGTTACATATGATCACATACTATGATAAGAAACATGCTTTTGTCTTTTCATTAATTTCTGATAGCGTATGTGTGCACTAGTATGTAGTCAGACTTAGAGAGTACTTATATGAGTCTGTAGAAAAATACTATAGATCCAACCTTATCCAAAAAAGAAAGTAAGGTCAAAGGAATAGTCAAGAAAAGTAGAGTCTCACCACAAGCCTTGTTGCATATGATTGCATTTTTCGACCCCAACAGTGGGGTCATTTACGGGGTATTTTTAAATACTCAACATATGTTTAACATTTTTCCCGGTAAAGGCAAAGACCCCATGTATGGATTGACAACATCAAGTATCGATAATTAGGTTTTCGGCTTAAATCGTAGTCATTATATTAGAGTAGATCAATGATATTTTTATTTTTAAACTTTCAAAGGAGATGTTGTTTCTATTTTCAATGGTATTATTAGGTTTGAATTAGTAATGTTTAAAGTGAAATGAATTTAATGATTTTTCGCACATAGTAATTACGCCATGTATATAGCAGCGTTACAAGAAAAGTATAGTCATTCATCGATATAGCTCATACGACTAGTTGTGAAGCTTCTCTAAGCATAGGAGAGGTCAAGCTTGAGAGCTTGTTAGGACATAGGAGAGGTTAAGCTTATGATGGATTTGGATAAGTGTAGGTCTCCCATTACTTGCTAGGACGTGGAGCCATCTTCAATCCTAACACTCTTCAAGTACAACTTGGTACGAGGCTAAAATCAAGCTCAATGGAGAAAGAAATCTAGCTGATCGGTCCTTTCTTCTTCCTTCCTTTGAACTATCTCTAAGGCTTTCTAAACACCGACCCATCAGTTTGCGCGGGTTCATAGCCGAAAAGCATTTGGCTTATATTTGTCTTGTAACAGCTCAAGTCTACCGCTAGCAAATATCGTCTTTTTTGGACTTTTCCTTTCAAGCTTCCCCTCAAGAGAGGTTTCCTTCCGGTGTCCAACCCCCTTCGAGGCATAACATCCTTGTTGGCAAACTGCCCGATGACTGTCTCTAATACCATTTGTAACAGTCCAAGCCCAGCTTTGGCCCATTACGTATCACCGTCAACCTCACAGTTTTAAAATGCATATGCTAAAGAGAGGTTTCCACACTCTTATTAAGTAATGTTTCATTCTCTTCCCCAATCGATGTGGAATCTCACAATCATCTCTTCAAATACTTTTCTTTGTCATGGCTCAATATCTAAAACTGAAAGACAACTCAACCGAATGAAAGCTTAAACTCAATCGATGAGAGGAAAGTTAATGCTTTACAACCAAATCTGCCCAAAACTTTTGGAATCGCAACTAATTAAGACAAGGGGTATTAAGGAGTTCAAGAGGTTCGGGGCACCTGACAATGTGTTCGAAGGCTACAATTAGCATCTCACCCGAAGCTAAGACGAGATTGAATGAAGCTGAAGTTTATATTTGGGTGCCTCCACCCTTAGAACATTGGTAGCTACTTCAACTCCAGTTTATAGAGCGTCATCTTCCATCTCGACGAAGCCATACAAAAAATGGCATTTGATAGCTTAGATTGAGCTTCATGTAACTTAGCCTCGACCTCATACAACTTCTTTCGAGTTTATTCATCCTAATATGATAGCAATCGATATCTTAGATTGAGCTTCATGCAACTTAGCCTTGACCTCATACTTCCTCTCGAGTTTGTTCATCCTGATATGATAGCAATCAATAGCTTAGATTGAGCTTCATGTAACTTAGCCTCGACCTCATACAACTTCTTTTCGAGTTTGTTCGTCCTGATATGATAGCAAACCATATCTCGAATTTCATCTCTGAGCGAGGACTCATCTAATCCTCTTGGCTTAGGTAAATATTGCCTCTTTCCGGCCATTTTATACCTTTAAATTTAGAAAAAGTTAACAAGTAAATCTATTTAGACCCTTAGATTATGATCCATAACTATTTCCACTAAATAGTTTTCTCTAAAAAAGAAGCAAAAAGACAACAAAATTACAAATCAGAAGAAGAGTGCTCAGGATTATCCTCTGTTAAAGCTGGAAATACCCTTTCATTCTTTGACTCAAACCTATATTGAGCAATGTTATGTCGAAAAAATAATGCAGCTTAGTACACACCTTCGTCCGATCTTACCGTCTGTTCCTGTGTTGA

mRNA sequence

ATGGGTATCTCATCGGGGCCGAAGCTCTCAGGGTTGCAAAAGCAAGTGCTCAGTCTATACAGAGCATTTCTTCGAGCAGCTCGTTCCAAATCCGTCGAAGATCGACGGCAAATGGAATCGGTTGTCGCCGCTGAGTTCCGCCGAAACGCCAAGCAAATCGATCGCAAAAATTTCATCCACATCGAGTACCTTCTTCGTCGAGCCTTGAGATTCGACGATCAATTTTGCAGAACAGTTCAAGTCGGTGGTAGAATCTTTGAAATGCTTAAAAATGTGGACAATGGATTTTCTTCCTTTGTGAGGTTAAGCTTAGTACACACCTTCGTCCGATCTTACCGTCTGTTCCTGTGTTGA

Coding sequence (CDS)

ATGGGTATCTCATCGGGGCCGAAGCTCTCAGGGTTGCAAAAGCAAGTGCTCAGTCTATACAGAGCATTTCTTCGAGCAGCTCGTTCCAAATCCGTCGAAGATCGACGGCAAATGGAATCGGTTGTCGCCGCTGAGTTCCGCCGAAACGCCAAGCAAATCGATCGCAAAAATTTCATCCACATCGAGTACCTTCTTCGTCGAGCCTTGAGATTCGACGATCAATTTTGCAGAACAGTTCAAGTCGGTGGTAGAATCTTTGAAATGCTTAAAAATGTGGACAATGGATTTTCTTCCTTTGTGAGGTTAAGCTTAGTACACACCTTCGTCCGATCTTACCGTCTGTTCCTGTGTTGA

Protein sequence

MGISSGPKLSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIHIEYLLRRALRFDDQFCRTVQVGGRIFEMLKNVDNGFSSFVRLSLVHTFVRSYRLFLC

Homology

[Close]

BLAST of Csor.00g039410 vs. ExPASy Swiss-Prot
Match: B0K036 (Succinate dehydrogenase assembly factor 1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Sdhaf1 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 2.9e-04
Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 0


Query: 8  KLSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIHIEYLLRR 67
          +LS LQ+QVLSLYR  LRA R K   + R     V AEFR++A  + R + + IEYL RR
Sbjct: 3  RLSRLQRQVLSLYRELLRAGRGKPGAEAR-----VRAEFRQHA-SLPRSDVLRIEYLYRR 59

Query: 68 ALR 71
            R
Sbjct: 63 GRR 59

[Close]

BLAST of Csor.00g039410 vs. NCBI nr
Match: KAG6592356.1 (hypothetical protein SDJN03_14702, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 225 bits (573), Expect = 6.08e-74
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MGISSGPKLSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIH 60
           MGISSGPKLSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIH
Sbjct: 1   MGISSGPKLSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIH 60

Query: 61  IEYLLRRALRFDDQFCRTVQVGGRIFEMLKNVDNGFSSFVRLSLVHTFVRSYRLFLC 117
           IEYLLRRALRFDDQFCRTVQVGGRIFEMLKNVDNGFSSFVRLSLVHTFVRSYRLFLC
Sbjct: 61  IEYLLRRALRFDDQFCRTVQVGGRIFEMLKNVDNGFSSFVRLSLVHTFVRSYRLFLC 117

[Close]

BLAST of Csor.00g039410 vs. NCBI nr
Match: XP_022973474.1 (succinate dehydrogenase assembly factor 1, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 138 bits (347), Expect = 1.37e-39
Identity = 81/111 (72.97%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 1   MGISSGPKLSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIH 60
           MGISSGPKLSGLQKQVLSLYRAFLRAARSKS EDRRQMES+VAAEFRRNAKQIDRKNFIH
Sbjct: 1   MGISSGPKLSGLQKQVLSLYRAFLRAARSKSAEDRRQMESIVAAEFRRNAKQIDRKNFIH 60

Query: 61  IEYLLRRA-LRFDDQFCRTVQVGGRIFEMLKNVDNGFSSFVRLSLVHTFVR 110
           IEYLLRRA + F +QF   V+      + LK     FSSFVRLS + + +R
Sbjct: 61  IEYLLRRATINFAEQFKSVVES----LKCLKMRTMDFSSFVRLSEILSDIR 107

[Close]

BLAST of Csor.00g039410 vs. NCBI nr
Match: XP_022925400.1 (succinate dehydrogenase assembly factor 1, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 132 bits (331), Expect = 3.72e-37
Identity = 79/111 (71.17%), Postives = 86/111 (77.48%), Query Frame = 0


Query: 1   MGISSGPKLSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIH 60
           MGISSGPKLSGLQKQVLSLYR+FLRAARSKS EDRRQMESVVAAEFRRNAKQIDRKNFIH
Sbjct: 1   MGISSGPKLSGLQKQVLSLYRSFLRAARSKSAEDRRQMESVVAAEFRRNAKQIDRKNFIH 60

Query: 61  IEYLLRRA-LRFDDQFCRTVQVGGRIFEMLKNVDNGFSSFVRLSLVHTFVR 110
           IEYLLRR  + F  Q    V+      + LK     FSSFVRLS + + +R
Sbjct: 61  IEYLLRRVTINFGKQSKSVVES----LKCLKMWTMDFSSFVRLSEILSDIR 107

[Close]

BLAST of Csor.00g039410 vs. NCBI nr
Match: KAG7025171.1 (SDH6-3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 116 bits (291), Expect = 1.63e-31
Identity = 64/73 (87.67%), Postives = 67/73 (91.78%), Query Frame = 0


Query: 9  LSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIHIEYLLRRA 68
          LSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIHIEYLLRRA
Sbjct: 2  LSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIHIEYLLRRA 61

Query: 69 -LRFDDQFCRTVQ 80
           + F +QF   V+
Sbjct: 62 TINFAEQFKSVVE 74

[Close]

BLAST of Csor.00g039410 vs. NCBI nr
Match: XP_023525064.1 (succinate dehydrogenase assembly factor 1, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023525065.1 succinate dehydrogenase assembly factor 1, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 116 bits (291), Expect = 6.79e-31
Identity = 62/82 (75.61%), Postives = 69/82 (84.15%), Query Frame = 0


Query: 1   MGISSGPKLSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIH 60
           MG+SS PKLSG+Q+QVLSLYRAFLRAARSKS EDRRQ+ESVV+AEFRRNAK IDRKNFI+
Sbjct: 27  MGVSSAPKLSGMQRQVLSLYRAFLRAARSKSAEDRRQIESVVSAEFRRNAKLIDRKNFIY 86

Query: 61  IEYLLRRALRFDDQFCRTVQVG 82
           IEYLLRR  +  DQ      VG
Sbjct: 87  IEYLLRRGNKQLDQLRSPATVG 108

[Close]

BLAST of Csor.00g039410 vs. ExPASy TrEMBL
Match: A0A6J1IEP3 (succinate dehydrogenase assembly factor 1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111472023 PE=4 SV=1)

HSP 1 Score: 138 bits (347), Expect = 6.61e-40
Identity = 81/111 (72.97%), Postives = 89/111 (80.18%), Query Frame = 0


Query: 1   MGISSGPKLSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIH 60
           MGISSGPKLSGLQKQVLSLYRAFLRAARSKS EDRRQMES+VAAEFRRNAKQIDRKNFIH
Sbjct: 1   MGISSGPKLSGLQKQVLSLYRAFLRAARSKSAEDRRQMESIVAAEFRRNAKQIDRKNFIH 60

Query: 61  IEYLLRRA-LRFDDQFCRTVQVGGRIFEMLKNVDNGFSSFVRLSLVHTFVR 110
           IEYLLRRA + F +QF   V+      + LK     FSSFVRLS + + +R
Sbjct: 61  IEYLLRRATINFAEQFKSVVES----LKCLKMRTMDFSSFVRLSEILSDIR 107

[Close]

BLAST of Csor.00g039410 vs. ExPASy TrEMBL
Match: A0A6J1EHV2 (succinate dehydrogenase assembly factor 1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111432701 PE=4 SV=1)

HSP 1 Score: 132 bits (331), Expect = 1.80e-37
Identity = 79/111 (71.17%), Postives = 86/111 (77.48%), Query Frame = 0


Query: 1   MGISSGPKLSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIH 60
           MGISSGPKLSGLQKQVLSLYR+FLRAARSKS EDRRQMESVVAAEFRRNAKQIDRKNFIH
Sbjct: 1   MGISSGPKLSGLQKQVLSLYRSFLRAARSKSAEDRRQMESVVAAEFRRNAKQIDRKNFIH 60

Query: 61  IEYLLRRA-LRFDDQFCRTVQVGGRIFEMLKNVDNGFSSFVRLSLVHTFVR 110
           IEYLLRR  + F  Q    V+      + LK     FSSFVRLS + + +R
Sbjct: 61  IEYLLRRVTINFGKQSKSVVES----LKCLKMWTMDFSSFVRLSEILSDIR 107

[Close]

BLAST of Csor.00g039410 vs. ExPASy TrEMBL
Match: A0A6P5TUL4 (succinate dehydrogenase assembly factor 1, mitochondrial-like OS=Prunus avium OX=42229 GN=LOC110770789 PE=4 SV=1)

HSP 1 Score: 111 bits (277), Expect = 2.06e-29
Identity = 55/74 (74.32%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 1  MGISSGPKLSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIH 60
          MG SSGP+LSG+QKQVLSLYR FLRAAR+KS EDR+Q+ES+V++EFRRNAK++DRKNF++
Sbjct: 1  MGASSGPRLSGMQKQVLSLYRGFLRAARAKSAEDRQQIESLVSSEFRRNAKEVDRKNFLY 60

Query: 61 IEYLLRRALRFDDQ 74
          IEYLLRRA +  DQ
Sbjct: 61 IEYLLRRAKKQLDQ 74

[Close]

BLAST of Csor.00g039410 vs. ExPASy TrEMBL
Match: A0A6P5RQA9 (succinate dehydrogenase assembly factor 1, mitochondrial-like OS=Prunus avium OX=42229 GN=LOC110747368 PE=4 SV=1)

HSP 1 Score: 110 bits (276), Expect = 2.93e-29
Identity = 54/74 (72.97%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 1  MGISSGPKLSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIH 60
          MG+S GP+LSG+QKQVLSLYR FLRAAR+KS EDR+Q+ES+V++EFRRNAK++DRKNF++
Sbjct: 1  MGVSRGPRLSGMQKQVLSLYRGFLRAARAKSAEDRQQIESLVSSEFRRNAKEVDRKNFLY 60

Query: 61 IEYLLRRALRFDDQ 74
          IEYLLRRA +  DQ
Sbjct: 61 IEYLLRRAKKQLDQ 74

[Close]

BLAST of Csor.00g039410 vs. ExPASy TrEMBL
Match: A0A314YHK4 (Succinate dehydrogenase assembly factor 1 mitochondrial OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_18024 PE=4 SV=1)

HSP 1 Score: 110 bits (276), Expect = 2.93e-29
Identity = 54/74 (72.97%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 1  MGISSGPKLSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIH 60
          MG+S GP+LSG+QKQVLSLYR FLRAAR+KS EDR+Q+ES+V++EFRRNAK++DRKNF++
Sbjct: 1  MGVSRGPRLSGMQKQVLSLYRGFLRAARAKSAEDRQQIESLVSSEFRRNAKEVDRKNFLY 60

Query: 61 IEYLLRRALRFDDQ 74
          IEYLLRRA +  DQ
Sbjct: 61 IEYLLRRAKKQLDQ 74

[Close]

BLAST of Csor.00g039410 vs. TAIR 10
Match: AT2G39725.1 (LYR family of Fe/S cluster biogenesis protein )

HSP 1 Score: 87.4 bits (215), Expect = 8.1e-18
Identity = 43/67 (64.18%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 8  KLSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIHIEYLLRR 67
          KLSG+QKQVLSLYR FLRAARS+ +EDR+++E +V+ EFR N+K++DRKNF +IEYLLR 
Sbjct: 5  KLSGMQKQVLSLYRGFLRAARSRPIEDRKRIEMIVSTEFRHNSKEVDRKNFQYIEYLLRL 64

Query: 68 ALRFDDQ 75
            +  DQ
Sbjct: 65 GTKQLDQ 71

[Close]

BLAST of Csor.00g039410 vs. TAIR 10
Match: AT2G39725.2 (LYR family of Fe/S cluster biogenesis protein )

HSP 1 Score: 87.4 bits (215), Expect = 8.1e-18
Identity = 43/67 (64.18%), Postives = 56/67 (83.58%), Query Frame = 0


Query: 8  KLSGLQKQVLSLYRAFLRAARSKSVEDRRQMESVVAAEFRRNAKQIDRKNFIHIEYLLRR 67
          KLSG+QKQVLSLYR FLRAARS+ +EDR+++E +V+ EFR N+K++DRKNF +IEYLLR 
Sbjct: 5  KLSGMQKQVLSLYRGFLRAARSRPIEDRKRIEMIVSTEFRHNSKEVDRKNFQYIEYLLRL 64

Query: 68 ALRFDDQ 75
            +  DQ
Sbjct: 65 GTKQLDQ 71

The following BLAST results are available for this feature:

BLAST of Csor.00g039410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B0K036	2.9e-04	49.21	Succinate dehydrogenase assembly factor 1, mitochondrial OS=Rattus norvegicus OX...	[more]

BLAST of Csor.00g039410 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6592356.1	6.08e-74	100.00	hypothetical protein SDJN03_14702, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022973474.1	1.37e-39	72.97	succinate dehydrogenase assembly factor 1, mitochondrial-like [Cucurbita maxima]	[more]
XP_022925400.1	3.72e-37	71.17	succinate dehydrogenase assembly factor 1, mitochondrial-like [Cucurbita moschat...	[more]
KAG7025171.1	1.63e-31	87.67	SDH6-3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023525064.1	6.79e-31	75.61	succinate dehydrogenase assembly factor 1, mitochondrial [Cucurbita pepo subsp. ...	[more]

BLAST of Csor.00g039410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IEP3	6.61e-40	72.97	succinate dehydrogenase assembly factor 1, mitochondrial-like OS=Cucurbita maxim...	[more]
A0A6J1EHV2	1.80e-37	71.17	succinate dehydrogenase assembly factor 1, mitochondrial-like OS=Cucurbita mosch...	[more]
A0A6P5TUL4	2.06e-29	74.32	succinate dehydrogenase assembly factor 1, mitochondrial-like OS=Prunus avium OX...	[more]
A0A6P5RQA9	2.93e-29	72.97	succinate dehydrogenase assembly factor 1, mitochondrial-like OS=Prunus avium OX...	[more]
A0A314YHK4	2.93e-29	72.97	Succinate dehydrogenase assembly factor 1 mitochondrial OS=Prunus yedoensis var....	[more]

BLAST of Csor.00g039410 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39725.1	8.1e-18	64.18	LYR family of Fe/S cluster biogenesis protein	[more]
AT2G39725.2	8.1e-18	64.18	LYR family of Fe/S cluster biogenesis protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008011	Complex 1 LYR protein	PFAM	PF05347	Complex1_LYR	coord: 14..71 e-value: 2.0E-10 score: 40.6
None	No IPR available	PANTHER	PTHR13675:SF1	SUCCINATE DEHYDROGENASE ASSEMBLY FACTOR 1, MITOCHONDRIAL	coord: 8..70
None	No IPR available	PANTHER	PTHR13675	LYR MOTIF-CONTAINING PROTEIN 2	coord: 8..70
None	No IPR available	CDD	cd20268	Complex1_LYR_SDHAF1_LYRM8	coord: 10..70 e-value: 4.14054E-21 score: 78.0218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g039410.m01	Csor.00g039410.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034553	mitochondrial respiratory chain complex II assembly
cellular_component	GO:0005739	mitochondrion