Csor.00g038840 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATTGAGGCGGCGGTTGTCGTGCACCACCTGCTTTGATGCTCTGTGGTTCTGCTATTGTATGCATCCTTATAATCAACTCAATTATGTTATTTTCTTAGTTTTCTTTTCCCTAATCACTAGTATATTTGTGTTGTTTCCCATTAATTAATTGGACTGAGGTTTTTAAAGTTCCATATCAATTGGGGAAGAGGATTTAAAGAAGTTTAATGTCTTTATAATATTTTACCCGAATCGTTTTTACGTTCTTTTTTCTTCCAAAAACTATTTTGCTCAGGATTAGGTTTAAATTTGCTCATCATTGTTGTAACTGTCTAATACTCATCTTTGCACCTAATTTTTGCTAATTGTTGACCTCTTTTTTTTCATATCGATGAGCTCATCATTGAACCAAATTGTTAACTTGTTAATCTACTGGTTATATTTACTGGCAGCTCCAGTTCATCAGATGCAGCAATACTACAGGCTTGGGTTTTTTGATAACTGTTCTGACAAATGGACATCTCTTATTGACTGTTTAAATCTCAAGACAAAACGAGCTTCCGAGGTTCAGGTACGTATCGGATACAAAAATACGCTCTGGTTCTTATAATGTATATATTTTAAGAATGCTGAAATCTTGCTGTGGATCTTTATTTGGTTTTTTTTTCCATTAGCCCTGATGTGTAAATATTAGGTGAGATTTCAATTGGACCAAAAGCTGTAAGACACAAATACCACTTCTAGCTTTTAGCTGTGTCTCCTCAAGTCCTTTTGGCTAGTCTACTAGAATTTTGTAGATAAGAAACTAACTTCCCATTAATGGAATGGATAGAACACAGAAAGGAGGAAGGATTCCAACTAGTAGAATACTCAAGGAATTTCCAAAAAACATTATCACACTTGTTTCTAGAAAAAAAAGTATGATGAAAAGGGATGCAACAAGAGGAGCTAAACTCTACAATACACTCTCAAATTTCTGCCCGTCTCTAGCCTTCTCTCTAAAGCTTGTGGTTAACGGCATGCAGATCTTTTTTATTAGGGCATGAAACTGTTAGAATGCCTGTGACTTAAATGAACAAAGCCCAAACCAATCGATGAAGTTCTCGGTATTAGAATTTAGTTAAGTTACTAATTTAGGCCCTACAATTGGGTTTCTATTCGATCAATAAACTTTAAAAAGTGTTGAATAAGTCCTTGAACTTTCAGTTTTATGTTTATTTGGTCCATAAACTTTAAAAAGGGTTGAATAAGTTCTTGAACTTTCAATTTTACGTTTATTTGCTCCATAAACTTTAAAACGTGTTTAAACCTTTTATTTTGTGCCTCGTAAGTCCAAAAACTTTCAATTTTATGTCTAATAAGCCTTGATGTATTCGAGTTTTTTAAAATTCACGAAATTATTGGATATAAAGTTGAAAGTTTATGGTTCTATTAGACTTAAACTTTAATCTTATATCTATTAGGTCAATAATTTTTAAAAACTTTGAACTTATCTTCAAAGATCACACAAACTTAATAGTTTATGGACTTATTAACACTTTTTCAAATCGGCAATCTTTAAGACACAAGCTTGAAAGCTGAAGAACTATACTTGTCATTTAACCTAGAATTTTTTTTTTATTTTTTATCTCATGCTTCATAGTATTAATATTTTTGTACATTATGCACTTCATTTATTTGAAGCCTACAACTTTTTGTAACTGATGCTTAGGCTTTAGAAGAGGGCAATTGCAGCCCAACATGGCTCATATTTGGAAAATTTCTAAGCCTCTTATCTCATCTCAACTCTATGGAATTTAAACATGCCAAATAACAGTGAATTTTATTTTTCTTTGGTCCTGATCACAAAATAAGTGATTTTTACAATATTGAGAGTAATCCTAAGTTTCATCGTTTATTCTACTTCTTAGGAAACATTCTGGAATTTTTCACATGTTTTATTTCCAACATCAGTTCTCCTATGAATTCTTTTGCAGCCCTTGTTTTGGCCTTCTAATATACTCCCAGTTTCTTATAATAATAAGAAGAATAATAAAGATGTTGAGGCGGCTGTTTCTTAGTTTCTGAAGATGGACTCTTGATGAGGAATTGGTAACTATTCATCTTTTATTCAAACTAATATGAGCTTTTTTAGTGTACTTCTGTAATAGCCTAAACCCACCGCTAGCAGATATGGTCTGCTTTGACTGGTTACGTATTGCCGTCAGTTTCACGGTTTTAAAACGCGTCTACTAGGGGAGAGGTTTTCCACACCCTATAAGGAATGCTTCGTTCCACCCTCTAATCGATATGGGATCTCACAACATCAGACATTAAAGAAAAAGAAGAAATAATTATTTTTCTCGTTTTTTTTTTCTTTTGGTAATCTCGTCCGATGACTGCAGGTTTGAATACCTTGTTTTTTCTCTATCTGTTTTTACTTTTTGGTTATTCAAATGTCATCTCAAAGAAAAACAAAAACCCTGTTGCTAAATACTTGTTTTGAGTAAGATCAATGCACAATTTGGTAGCTTGTTACCTTGAACCGAGTCTTGTTTTTTAGGGTCTCTCCACAATCAGATATTACTTTTATATGGTTACTTAAGAAGTAACAAGATTAAATTAAATGCAGGAAATCCTCGAAAGCCGAGAGAAAGCCAAATCTCACATCTGGACGTTTCGAACCCCAGCAGAAGCATCGTCGCATTGGAAAGAACTGTTCGGAGATTTAGATGAAATGGAATGA ATGGGATTGAGGCGGCGGTTGTCGTGCACCACCTGCTTTGATGCTCTGTGGTTCTGCTATTCTCCAGTTCATCAGATGCAGCAATACTACAGGCTTGGGTTTTTTGATAACTGTTCTGACAAATGGACATCTCTTATTGACTGTTTAAATCTCAAGACAAAACGAGCTTCCGAGGTTCAGGAAATCCTCGAAAGCCGAGAGAAAGCCAAATCTCACATCTGGACGTTTCGAACCCCAGCAGAAGCATCGTCGCATTGGAAAGAACTGTTCGGAGATTTAGATGAAATGGAATGA ATGGGATTGAGGCGGCGGTTGTCGTGCACCACCTGCTTTGATGCTCTGTGGTTCTGCTATTCTCCAGTTCATCAGATGCAGCAATACTACAGGCTTGGGTTTTTTGATAACTGTTCTGACAAATGGACATCTCTTATTGACTGTTTAAATCTCAAGACAAAACGAGCTTCCGAGGTTCAGGAAATCCTCGAAAGCCGAGAGAAAGCCAAATCTCACATCTGGACGTTTCGAACCCCAGCAGAAGCATCGTCGCATTGGAAAGAACTGTTCGGAGATTTAGATGAAATGGAATGA MGLRRRLSCTTCFDALWFCYSPVHQMQQYYRLGFFDNCSDKWTSLIDCLNLKTKRASEVQEILESREKAKSHIWTFRTPAEASSHWKELFGDLDEME Homology
BLAST of Csor.00g038840 vs. NCBI nr
Match: KAG6583605.1 (hypothetical protein SDJN03_19537, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 210 bits (535), Expect = 8.74e-69 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of Csor.00g038840 vs. NCBI nr
Match: XP_022964668.1 (uncharacterized protein LOC111464679 [Cucurbita moschata] >XP_022964669.1 uncharacterized protein LOC111464679 [Cucurbita moschata] >XP_022964670.1 uncharacterized protein LOC111464679 [Cucurbita moschata] >XP_022964671.1 uncharacterized protein LOC111464679 [Cucurbita moschata] >KAG7019308.1 hypothetical protein SDJN02_18268, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 208 bits (529), Expect = 1.16e-67 Identity = 96/97 (98.97%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Csor.00g038840 vs. NCBI nr
Match: XP_022970353.1 (uncharacterized protein LOC111469344 [Cucurbita maxima] >XP_022970354.1 uncharacterized protein LOC111469344 [Cucurbita maxima] >XP_022970355.1 uncharacterized protein LOC111469344 [Cucurbita maxima] >XP_022970356.1 uncharacterized protein LOC111469344 [Cucurbita maxima]) HSP 1 Score: 207 bits (527), Expect = 2.35e-67 Identity = 95/97 (97.94%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Csor.00g038840 vs. NCBI nr
Match: XP_023519221.1 (uncharacterized protein LOC111782657 [Cucurbita pepo subsp. pepo] >XP_023519222.1 uncharacterized protein LOC111782657 [Cucurbita pepo subsp. pepo] >XP_023519223.1 uncharacterized protein LOC111782657 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 204 bits (520), Expect = 2.74e-66 Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Csor.00g038840 vs. NCBI nr
Match: XP_022152905.1 (uncharacterized protein C227.17c [Momordica charantia] >XP_022152907.1 uncharacterized protein C227.17c [Momordica charantia]) HSP 1 Score: 192 bits (489), Expect = 1.47e-61 Identity = 87/96 (90.62%), Postives = 92/96 (95.83%), Query Frame = 0
BLAST of Csor.00g038840 vs. ExPASy TrEMBL
Match: A0A6J1HJL4 (uncharacterized protein LOC111464679 OS=Cucurbita moschata OX=3662 GN=LOC111464679 PE=4 SV=1) HSP 1 Score: 208 bits (529), Expect = 5.63e-68 Identity = 96/97 (98.97%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Csor.00g038840 vs. ExPASy TrEMBL
Match: A0A6J1I2M7 (uncharacterized protein LOC111469344 OS=Cucurbita maxima OX=3661 GN=LOC111469344 PE=4 SV=1) HSP 1 Score: 207 bits (527), Expect = 1.14e-67 Identity = 95/97 (97.94%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Csor.00g038840 vs. ExPASy TrEMBL
Match: A0A6J1DHI6 (uncharacterized protein C227.17c OS=Momordica charantia OX=3673 GN=LOC111020523 PE=4 SV=1) HSP 1 Score: 192 bits (489), Expect = 7.13e-62 Identity = 87/96 (90.62%), Postives = 92/96 (95.83%), Query Frame = 0
BLAST of Csor.00g038840 vs. ExPASy TrEMBL
Match: A0A1S3CG12 (uncharacterized protein LOC103500495 OS=Cucumis melo OX=3656 GN=LOC103500495 PE=4 SV=1) HSP 1 Score: 191 bits (484), Expect = 4.13e-61 Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Csor.00g038840 vs. ExPASy TrEMBL
Match: A0A0A0LSX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G145950 PE=4 SV=1) HSP 1 Score: 188 bits (478), Expect = 3.39e-60 Identity = 84/97 (86.60%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Csor.00g038840 vs. TAIR 10
Match: AT4G25315.2 (Expressed protein ) HSP 1 Score: 134.0 bits (336), Expect = 6.3e-32 Identity = 60/95 (63.16%), Postives = 74/95 (77.89%), Query Frame = 0
BLAST of Csor.00g038840 vs. TAIR 10
Match: AT4G25315.1 (Expressed protein ) HSP 1 Score: 121.3 bits (303), Expect = 4.2e-28 Identity = 59/114 (51.75%), Postives = 74/114 (64.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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