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Csor.00g037970 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCCAAATTGGTTCTGATTATAGTTATTGTACTCGATGTTATTGCTTTTGGCCTGGCCGTTGCCGCTGAGCAAAGAAGAAGCACTGTAAGCTTCAGTCCCTCTCTCCATCTCTTCCATTCATTGTCGCTTTCTTTTGTGCTTTTTACTGCAATTTTTGTCGGTTTGGGGTTCTTTGATTTCTGGGTCTGTTTGGTTTCTGTGATTCTGTTTGTGGGTCGTTTTGGAGTTGATGAAATCGGCATTGTGAAATCGAGAATGGATGAACCAAGAATCTTTCCTTTTCTGGGTTGTTCTTGGTCACCAAACAACGATTTATTGGCTTTTCTGCTTCAAATTTGTGGTATCAGTTCATCCATTAGGGTTCATAAATTAGGGCTTTAGTTGTTAAAAAGCAGGAAAATGGATAATGGATTAAGTTGTTCTTGGTTTGAAAATTGTTGACATGTTCATGATTTAGAGCATACTAACAATAGTGACTATACTTGGCTTTTCTAAAATGCAATTCTGAGCTGTTCTGAAACATTGTCCATTTTGAGTCTAAGCTCTCGTGGAGATGTATTCCTTACTTATAAACCCATGATCAACCCCTTAATTAACCGATGCGGGACTCCTCTCCTGACAATCCTCCCCTCGAACAAAGCACATCATAGAGCCTTCCCTGAGGCCTATGGAGCCCTCGAACAGCCTCCCCTGAATCGAAGCTCGACTCCTTCTCTGGAGCTCTTGAAAAAGTACACCATTTGCTCGATACTTGAGTCACTTTTGAACTTCGAGGCTCACAACTTCTTTGTTCGATATTTGAGGATTCTATTGACATGACTAAGTTAAGGGTATGACTCTAATACCATGTTAGGAATCATGACTCTCCACAATGGTATGATATTGTCCATTTTGAGCCTAAGCTCTTATGGCTTTACTTTTGGTTTCCCTAAAAGGTCTCATACCAATGTAGATGTATTTCTTACTTATAAAACCCATGATCAACTCCGTAATTAGCCGATGTGGGATTCCTCTCCCAACAATCCTCCTCTCGAACAAAGCACACCATAGAGCCTCCCCTGATGCCTATGGAGCCCTCGAACAGTCTCCCCTTAATCGAGGCTCGACTCCTTTTCTATAGTCCTCGAACAAAGTACACTCTTTGCTCGACACTTGAGTCACTTTTGACTACACCTTCGAGGTTCACAACTTCTTTGTTCGTTATTTGAGGATTCCATTGACATGCCTAAGTTAAGGGTATAACTCTGATACCATGTTAGGAATTACGAGTCTCCACAATGATATGATATTGTCTACTTTGAGCATAAGCTCTTATGGCTTTGCTTTTGATTTCCTCAAAAGGCCTCATACCAATGTAGATGTATTTCTGACTTATAAACCCACGATCAACTCCTTAATTAGCCGATGTGGAACAAAGGAGACTTCCGTATATTTCTTTGTTTCTAACTACTAAGCACGTTACTTCAAAATGGTCGGGCGTTTACTTTCGATCTAGACAATGGTAAAATTAAGGTAACTGTTCTCATGTGTTTCCACCATCACTCACTCGTTCATTCATATTGCTATGAATCTAATCTTACTAATAAGTTGTATCCAACGCATACTCAATAACTGGTTTCGTTCTGTACTCCTTTGGTTTCTTCGTTACTTCGAAGATCGACGAGTTGGTTTCAGCTGATTTCTAATGTCTATATGATATACTAGCATAGGATTTGATGCATTTCCGCTCATAATGTATCGTGTATTTATCGTTTGATAACAGGCCAACGTTGTACCAGATAGTGAAAAGAATTACAACTATTGTGTGTATGACTCCGACATCTCGACAGGCTATGGCGTCGGTGCTTTTCTACTTCTCATGGCTAGCCAGGCCCTCATAATGGTAGCTAGCCGATGTTTTTGTTGCGGGAAGTCGTTAAGTCCTGGAGGTTCGAGGGCATGGGCTATTATCCTATTCATAATCTGCTGGTAAGTGAACCTATTTGTGAGCTTCACTCCATAAGTTCAAACTAAAGGGTCCAATCCAATACACACAATCTTGCAGGGTGTTTTTCTTCATTGCTGAGGTTTGCTTGTTCGCGGGCTCGATAAGGAACGCCTACCACACCAAGTACCGAACCATGTTTGGTGACAATCCTCCGTCGTGCCAAACTTTGAGGAAGGGAGTTTTCGGTGCAGGTGCAGCCTTCATTTTCCTTAATGCCATTGTATCAGAACTCTACTATGTGTTCTACTCGAAGGCGAGGGAAAGCTTCCTTCCCTACGGCGGAGAAACGGGCGTTGGCATGGGAACCTACAAATGA ATGGCGTCCAAATTGGTTCTGATTATAGTTATTGTACTCGATGTTATTGCTTTTGGCCTGGCCGTTGCCGCTGAGCAAAGAAGAAGCACTGCCAACGTTGTACCAGATAGTGAAAAGAATTACAACTATTGTGTGTATGACTCCGACATCTCGACAGGCTATGGCGTCGGTGCTTTTCTACTTCTCATGGCTAGCCAGGCCCTCATAATGGTAGCTAGCCGATGTTTTTGTTGCGGGAAGTCGTTAAGTCCTGGAGGTTCGAGGGCATGGGCTATTATCCTATTCATAATCTGCTGGGTGTTTTTCTTCATTGCTGAGGTTTGCTTGTTCGCGGGCTCGATAAGGAACGCCTACCACACCAAGTACCGAACCATGTTTGGTGACAATCCTCCGTCGTGCCAAACTTTGAGGAAGGGAGTTTTCGGTGCAGGTGCAGCCTTCATTTTCCTTAATGCCATTGTATCAGAACTCTACTATGTGTTCTACTCGAAGGCGAGGGAAAGCTTCCTTCCCTACGGCGGAGAAACGGGCGTTGGCATGGGAACCTACAAATGA ATGGCGTCCAAATTGGTTCTGATTATAGTTATTGTACTCGATGTTATTGCTTTTGGCCTGGCCGTTGCCGCTGAGCAAAGAAGAAGCACTGCCAACGTTGTACCAGATAGTGAAAAGAATTACAACTATTGTGTGTATGACTCCGACATCTCGACAGGCTATGGCGTCGGTGCTTTTCTACTTCTCATGGCTAGCCAGGCCCTCATAATGGTAGCTAGCCGATGTTTTTGTTGCGGGAAGTCGTTAAGTCCTGGAGGTTCGAGGGCATGGGCTATTATCCTATTCATAATCTGCTGGGTGTTTTTCTTCATTGCTGAGGTTTGCTTGTTCGCGGGCTCGATAAGGAACGCCTACCACACCAAGTACCGAACCATGTTTGGTGACAATCCTCCGTCGTGCCAAACTTTGAGGAAGGGAGTTTTCGGTGCAGGTGCAGCCTTCATTTTCCTTAATGCCATTGTATCAGAACTCTACTATGTGTTCTACTCGAAGGCGAGGGAAAGCTTCCTTCCCTACGGCGGAGAAACGGGCGTTGGCATGGGAACCTACAAATGA MASKLVLIIVIVLDVIAFGLAVAAEQRRSTANVVPDSEKNYNYCVYDSDISTGYGVGAFLLLMASQALIMVASRCFCCGKSLSPGGSRAWAIILFIICWVFFFIAEVCLFAGSIRNAYHTKYRTMFGDNPPSCQTLRKGVFGAGAAFIFLNAIVSELYYVFYSKARESFLPYGGETGVGMGTYK Homology
BLAST of Csor.00g037970 vs. NCBI nr
Match: XP_022935762.1 (uncharacterized protein LOC111442584 [Cucurbita moschata] >XP_023535137.1 uncharacterized protein LOC111796652 [Cucurbita pepo subsp. pepo] >KAG6591977.1 hypothetical protein SDJN03_14323, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024853.1 hypothetical protein SDJN02_13672 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 368 bits (945), Expect = 1.73e-128 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of Csor.00g037970 vs. NCBI nr
Match: XP_022976585.1 (uncharacterized protein LOC111476938 [Cucurbita maxima] >XP_022976586.1 uncharacterized protein LOC111476938 [Cucurbita maxima]) HSP 1 Score: 367 bits (943), Expect = 3.49e-128 Identity = 182/184 (98.91%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of Csor.00g037970 vs. NCBI nr
Match: XP_038900268.1 (uncharacterized protein LOC120087350 [Benincasa hispida]) HSP 1 Score: 357 bits (916), Expect = 4.57e-124 Identity = 176/184 (95.65%), Postives = 179/184 (97.28%), Query Frame = 0
BLAST of Csor.00g037970 vs. NCBI nr
Match: XP_031740219.1 (uncharacterized protein LOC101208795 [Cucumis sativus] >XP_031740220.1 uncharacterized protein LOC101208795 [Cucumis sativus] >KGN55148.1 hypothetical protein Csa_012625 [Cucumis sativus]) HSP 1 Score: 355 bits (911), Expect = 2.64e-123 Identity = 174/184 (94.57%), Postives = 178/184 (96.74%), Query Frame = 0
BLAST of Csor.00g037970 vs. NCBI nr
Match: XP_008452482.1 (PREDICTED: uncharacterized protein LOC103493502 [Cucumis melo] >KAA0064347.1 DUF1218 domain-containing protein [Cucumis melo var. makuwa] >TYK20240.1 DUF1218 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 348 bits (894), Expect = 1.03e-120 Identity = 172/184 (93.48%), Postives = 178/184 (96.74%), Query Frame = 0
BLAST of Csor.00g037970 vs. ExPASy TrEMBL
Match: A0A6J1F6H9 (uncharacterized protein LOC111442584 OS=Cucurbita moschata OX=3662 GN=LOC111442584 PE=4 SV=1) HSP 1 Score: 368 bits (945), Expect = 8.36e-129 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of Csor.00g037970 vs. ExPASy TrEMBL
Match: A0A6J1IJW2 (uncharacterized protein LOC111476938 OS=Cucurbita maxima OX=3661 GN=LOC111476938 PE=4 SV=1) HSP 1 Score: 367 bits (943), Expect = 1.69e-128 Identity = 182/184 (98.91%), Postives = 184/184 (100.00%), Query Frame = 0
BLAST of Csor.00g037970 vs. ExPASy TrEMBL
Match: A0A0A0L071 (Fiber protein Fb34 OS=Cucumis sativus OX=3659 GN=Csa_4G638370 PE=4 SV=1) HSP 1 Score: 355 bits (911), Expect = 1.28e-123 Identity = 174/184 (94.57%), Postives = 178/184 (96.74%), Query Frame = 0
BLAST of Csor.00g037970 vs. ExPASy TrEMBL
Match: A0A5A7VBE4 (DUF1218 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003790 PE=4 SV=1) HSP 1 Score: 348 bits (894), Expect = 5.00e-121 Identity = 172/184 (93.48%), Postives = 178/184 (96.74%), Query Frame = 0
BLAST of Csor.00g037970 vs. ExPASy TrEMBL
Match: A0A1S3BTB6 (uncharacterized protein LOC103493502 OS=Cucumis melo OX=3656 GN=LOC103493502 PE=4 SV=1) HSP 1 Score: 348 bits (894), Expect = 5.00e-121 Identity = 172/184 (93.48%), Postives = 178/184 (96.74%), Query Frame = 0
BLAST of Csor.00g037970 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 253.1 bits (645), Expect = 1.8e-67 Identity = 126/173 (72.83%), Postives = 142/173 (82.08%), Query Frame = 0
BLAST of Csor.00g037970 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 238.0 bits (606), Expect = 5.9e-63 Identity = 115/170 (67.65%), Postives = 137/170 (80.59%), Query Frame = 0
BLAST of Csor.00g037970 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 236.1 bits (601), Expect = 2.2e-62 Identity = 116/170 (68.24%), Postives = 139/170 (81.76%), Query Frame = 0
BLAST of Csor.00g037970 vs. TAIR 10
Match: AT1G61065.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 230.7 bits (587), Expect = 9.4e-61 Identity = 114/167 (68.26%), Postives = 140/167 (83.83%), Query Frame = 0
BLAST of Csor.00g037970 vs. TAIR 10
Match: AT1G13380.1 (Protein of unknown function (DUF1218) ) HSP 1 Score: 170.2 bits (430), Expect = 1.5e-42 Identity = 80/167 (47.90%), Postives = 116/167 (69.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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