Csor.00g037920 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATCAACAACCGGGTGCGCCATTAGCCGGTCAACGAAGCCACCTCCAAATTTGGTCAACCTCTTTGACAAGGCTGGTGGAGATAAGTTCCGGCGGAATCAAGGGAGGAGAGAGGTTTTGAGAAGGGCGTTGATGCCTCCCACCCGGAAACCCACTCTCCGGTGGCTGAATTTCCGTCCAACTCCTAGTCGGCTTTCCAATATGTCTATGGCGGAAGCTTAA ATGAAATCAACAACCGGGTGCGCCATTAGCCGGTCAACGAAGCCACCTCCAAATTTGGTCAACCTCTTTGACAAGGCTGGTGGAGATAAGTTCCGGCGGAATCAAGGGAGGAGAGAGGTTTTGAGAAGGGCGTTGATGCCTCCCACCCGGAAACCCACTCTCCGGTGGCTGAATTTCCGTCCAACTCCTAGTCGGCTTTCCAATATGTCTATGGCGGAAGCTTAA ATGAAATCAACAACCGGGTGCGCCATTAGCCGGTCAACGAAGCCACCTCCAAATTTGGTCAACCTCTTTGACAAGGCTGGTGGAGATAAGTTCCGGCGGAATCAAGGGAGGAGAGAGGTTTTGAGAAGGGCGTTGATGCCTCCCACCCGGAAACCCACTCTCCGGTGGCTGAATTTCCGTCCAACTCCTAGTCGGCTTTCCAATATGTCTATGGCGGAAGCTTAA MKSTTGCAISRSTKPPPNLVNLFDKAGGDKFRRNQGRREVLRRALMPPTRKPTLRWLNFRPTPSRLSNMSMAEA Homology
BLAST of Csor.00g037920 vs. NCBI nr
Match: KAG6591981.1 (hypothetical protein SDJN03_14327, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 153 bits (386), Expect = 9.16e-47 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Csor.00g037920 vs. NCBI nr
Match: KAG7024857.1 (hypothetical protein SDJN02_13676, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 100 bits (249), Expect = 1.48e-25 Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 0
BLAST of Csor.00g037920 vs. NCBI nr
Match: KAA0036871.1 (uncharacterized protein E6C27_scaffold20G001820 [Cucumis melo var. makuwa] >TYJ95931.1 uncharacterized protein E5676_scaffold110G002460 [Cucumis melo var. makuwa]) HSP 1 Score: 82.4 bits (202), Expect = 2.05e-18 Identity = 39/47 (82.98%), Postives = 44/47 (93.62%), Query Frame = 0
BLAST of Csor.00g037920 vs. NCBI nr
Match: XP_011652880.1 (uncharacterized protein LOC105435142 [Cucumis sativus]) HSP 1 Score: 82.0 bits (201), Expect = 2.90e-18 Identity = 39/47 (82.98%), Postives = 44/47 (93.62%), Query Frame = 0
BLAST of Csor.00g037920 vs. NCBI nr
Match: KGN60027.2 (hypothetical protein Csa_001878 [Cucumis sativus]) HSP 1 Score: 81.6 bits (200), Expect = 1.26e-17 Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 0
BLAST of Csor.00g037920 vs. ExPASy TrEMBL
Match: A0A5A7T5L7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G002460 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 9.91e-19 Identity = 39/47 (82.98%), Postives = 44/47 (93.62%), Query Frame = 0
BLAST of Csor.00g037920 vs. ExPASy TrEMBL
Match: A0A0A0LD23 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G852440 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.41e-18 Identity = 39/47 (82.98%), Postives = 44/47 (93.62%), Query Frame = 0
BLAST of Csor.00g037920 vs. ExPASy TrEMBL
Match: A0A068UC67 (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00021180001 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.03e-14 Identity = 33/43 (76.74%), Postives = 38/43 (88.37%), Query Frame = 0
BLAST of Csor.00g037920 vs. ExPASy TrEMBL
Match: B9N1L2 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G404500 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 2.63e-13 Identity = 33/44 (75.00%), Postives = 36/44 (81.82%), Query Frame = 0
BLAST of Csor.00g037920 vs. ExPASy TrEMBL
Match: A0A4U5P590 (Uncharacterized protein OS=Populus alba OX=43335 GN=D5086_0000228140 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 2.63e-13 Identity = 33/44 (75.00%), Postives = 36/44 (81.82%), Query Frame = 0
BLAST of Csor.00g037920 vs. TAIR 10
Match: AT3G15518.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 56.6 bits (135), Expect = 9.7e-09 Identity = 27/39 (69.23%), Postives = 30/39 (76.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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