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Csor.00g037840 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGTGTCCACGTGGCATCCACCTTAGCTCAAATATTCTCCTTAAAACATGTTTATATATTTTAATTTTTTAATTAAAAAAATTAAATTATAAATTTAGTTTTTATATTTCACCCTATGTGTCTGGATTTTTAATAACCTTATTGAATTTTAAAAGAGTTTAATGAATTATTAATATATGTTTTAAAAAAAAAACTGATTTATTAAATATAAAATTAAAAATTGTGTCTAATTTGTTGGATGATGAAAGTCCCACGTCAGCTAATTTAGAGAATGATCATGTGTTTATAAATAAAGAATACTTTTCCCATTGGTGCGAGACTTTTTGGGGAAGCACAAAGCAAAGCCACGAGAGCTTATGCTCAAAGGGGACAATATCATTCCATTGTGGAAAGTCATGTTCGTTCTAACATGGTATCAGCGCAACAGGTAGAGTCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCAAATACCATCCGAGGTAGTGACAATAAATAACAATACCGAGCTCTTCGAGTCTGGTAATTGGAATGAGTACAATCTAAATCGCTTAACGAGGATCGATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCTGTAATTCAAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAGCTCGTAGTTGGACCTTGGATTGGGTCGATCGGTCCGCCTATGGTGAGCACCGATTGACTCGTCCCTTGCTTGTCTCAAAGATTAAGCCATGAGAGCTTATGTTCAAAGTGGACAATATTATACCATTGTGGAGAGTCGTGTTGGTTCTGACATAATTAAGATTTTTTTAAAACATTATTGACATAAATTGAGGATTTATTAAATATAAAATTAAAAAAATTATTACAACTATAACTATATATAATTATATTAAGAATGTTATTATTAATATTAGTATTTACCGACTCACCGAATAAACCCGAGGAAAAGCGGGAAAAGATTGGAACGATAAAACGATGTCGTTTCAATGGCAATCAACGGCATACGTTTAGAGCTTCTGCAATAGCGATCCTAGAGGTTCTGTGCTGCTGCTGCTGGGGGTGCTGAAGTTTGGGCAGCGACGAAGCCGGTGAGTTCTTAAGGTTTTGTTTTTGTTTCTGATTTTCTTTAGGTTAAAGTTTTAGGATTATGGAGAATTTTCTGTTTGGTTGCCGAGAAAGAGATCGGGAATTGATTTTGCTCGAGGCGGGTGAACTTGGTGAATATTGATTCTGAACCTGTAATAGTTCACTTTGATTTGGAATCGTTTTCTCTCTGTTGCGGAGGAATCTGGAGTCGTTTGTGTCTTTGAAACCTTCTTTATCGTGATTCGCAGGCTATAGGACAGATTTCTTAGTGAATGAACAAAAAATGGAATTGGCTGCATTTAGGGTTTTCTGCTTCATGTAGTTATGGCGATTCTGTGATTTGGTTTTTCTGTTCGTGTGATGGTTTAGTTCTTGACTTAAAATTTTCACTAAATATCCGATTGGAGATCGGTTTGGGAATGGAATATGAGTAAGTGAATGAAGTTGAGAAACCTCCTGTGATTTGAGGATCATTTTCTATCCATTTGTATTTTCTTAGTTTCCTAAACATGTAGTCGAATTGTTGCATTGTTTAGAGATCGTTACGAAAGCTTAAGGGCTAAAAATGAGTTTAAGCTTCTTAATTAGCAGTAGTTGTCGTACTGGTCATGGTTTTCATTATAGATTAGGTGCGATCCCACGTCGAAATTAGGAGTAGTTGTCGTACTGGTCATGGTTTTCATTATAGATTAGGTGAGATCCCACGTCGATTGGAGAGGGGAATGAGTGCCAGTGAGGACGCTGGGCCCTGAAGGAGTGAATTGTGAGGTTTTCATTATAGATTAGGTGAGATGCCACGTCGATTGGAGAGGGGAATGAGTGCCAGTGAGGACGCTGGGCCCTGAAGGGGGTGGATTGTGAGGTTTTCATTATAGATTAGGTGAGATCCCACGTCGATTGGAGAGGGGAATGAGTGCCAGTGAGGACGCTGGACCCTGAATGGGGTGGATTGTGAGGTTTTCATTATAGATTAGGTGAGATCCCACGTCGATTGGAGAGGGGAATGAGTGCCAGTGAGGACGCTGGGCCCTGAATGGGGTGGATTGTGAGGTTTTCATTATAGATTAGGTGAGATCCCACGTCGATTGGAGAGGAGAATGAGTGCTAGTGAGGACGCTGGGCCCTGAAGGGGGTGGATTGTGAGATCACACATAAGTTGGAGGGGGGAACGAAGCATTCTTTATAAGAGTGTGAAAACCTCTCCTTAGCAGACGCGTTTTAAAAATTTTGAGGGAAATCTCGAAAGGGAAAGCCCAAAGAGGACAATATCGGCTAGCAGTGAGCTTGAGCTGTTATAGATCAAGTGCGTGCTTTTCTGAGATTGGATACTTTCTTTTCTCTGAGATTGGATAGTATTATGACTTCGAGTCCCAGTTGGGAGTTTGTTTTCTTCTGGTGAATTGAGGGAGATGAACCCTAATCCAATGCAGCATTTGTTAGTTATACATACACACATTCTTCGTATACCATGATGTTTATATTTGTATATCAATTTCGATGACTGTATGTAGATTATCTGGCTCATCGACCGATCATGGAAAGTAAAGTCAGCGTCTTGCCTAAAAACGACGGGAAACAAATGGGACATCAAGAGGCGAAGGTGGTTGTTCAGGAAGAAATGAAACGAGTTCAACAGCTTCCTTCTAACAGCACCTATGCTACTCATCGGATGCGGGTTTTAAACAAAATTCTGCAGCTTTTATCAATTCAGGTATCATGGAACTGCAGCAATCATAAAATCAGTTCATGTTAATAATTTTGTTGGTTATAAAATTATATTTGCACTCTATTACCCTGCATTCGCAGTCTAAACTAGTTATCTGTTATAGCCATCTTGTTCGCATATCTGTTGTTGTGTTTTGAAAGGGACGTTTTGAAAGGATTGCGAAGGAAATTGATATTTTAAACAACGTTGCATATCTGTTGTGTTTCGAAAGGGACATTTTGAAATCGCGAAGGAAATTGATATTTTCAACAAGATGTCGTTGCCTAATGCTTAATGGTTTGATTGCTTACTTTAGAGTTTGTTTATTTGTTCGTTCATATTGATGTCTTTAGGTTTCACATTCATTTTAAAGCTTGTACTTGTACGAATTCTTTGCAGTGGTATTATCTAATAGTAATAATTTGCAGCTTTCCTAATTACAAGAACATCTATTCATCTTTAGTCTACCTTTCAATGATTCTATTGATTTACAATAATTAAACTTTTACTCTCTGTTTTCCTATTTTCTTATTGGTAATTTCAGATAGATTTTTCTTCATACAAGGCTTCAAGTTCTATTTCACAATTTTCTTTCGGTCCATTTAGTGTAGAATAACATCGTGAAAAAGATCTTAGTTTCGTTCCAAAAGAGCATATACTCGATAATTTTAACACGTGCTGTTCTACAGTCGAGTCATAAACTTTCTTATGGTTGCAGAAATTTCTTGGAAGTTAGAAGTAATGTGAAATTCATGATTTGAACTCGGAATTTGATATCTTTTCTGTTTGTTATCTCGTTTTCGTTTGTCAGAGAACTGCATCACAGGAAGAAGAACTGGAGTTGCTGTTTGCTGGGCTGTCTCTGTGA ATGTGTTTGGGCAGCGACGAAGCCGATTATCTGGCTCATCGACCGATCATGGAAAGTAAAGTCAGCGTCTTGCCTAAAAACGACGGGAAACAAATGGGACATCAAGAGGCGAAGGTGGTTGTTCAGGAAGAAATGAAACGAGTTCAACAGCTTCCTTCTAACAGCACCTATGCTACTCATCGGATGCGGGTTTTAAACAAAATTCTGCAGCTTTTATCAATTCAGAGAACTGCATCACAGGAAGAAGAACTGGAGTTGCTGTTTGCTGGGCTGTCTCTGTGA ATGTGTTTGGGCAGCGACGAAGCCGATTATCTGGCTCATCGACCGATCATGGAAAGTAAAGTCAGCGTCTTGCCTAAAAACGACGGGAAACAAATGGGACATCAAGAGGCGAAGGTGGTTGTTCAGGAAGAAATGAAACGAGTTCAACAGCTTCCTTCTAACAGCACCTATGCTACTCATCGGATGCGGGTTTTAAACAAAATTCTGCAGCTTTTATCAATTCAGAGAACTGCATCACAGGAAGAAGAACTGGAGTTGCTGTTTGCTGGGCTGTCTCTGTGA MCLGSDEADYLAHRPIMESKVSVLPKNDGKQMGHQEAKVVVQEEMKRVQQLPSNSTYATHRMRVLNKILQLLSIQRTASQEEELELLFAGLSL Homology
BLAST of Csor.00g037840 vs. NCBI nr
Match: KAG6591989.1 (hypothetical protein SDJN03_14335, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 176 bits (447), Expect = 1.75e-55 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Csor.00g037840 vs. NCBI nr
Match: KAG7024864.1 (hypothetical protein SDJN02_13683 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 142 bits (357), Expect = 5.85e-42 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Csor.00g037840 vs. NCBI nr
Match: XP_023535148.1 (uncharacterized protein LOC111796661 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 140 bits (353), Expect = 2.39e-41 Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0
BLAST of Csor.00g037840 vs. NCBI nr
Match: XP_022935764.1 (uncharacterized protein LOC111442587 [Cucurbita moschata] >XP_022976616.1 uncharacterized protein LOC111476958 [Cucurbita maxima]) HSP 1 Score: 135 bits (339), Expect = 3.26e-39 Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 0
BLAST of Csor.00g037840 vs. NCBI nr
Match: XP_022139403.1 (uncharacterized protein LOC111010342 [Momordica charantia] >XP_022139404.1 uncharacterized protein LOC111010342 [Momordica charantia]) HSP 1 Score: 119 bits (298), Expect = 5.83e-33 Identity = 65/77 (84.42%), Postives = 68/77 (88.31%), Query Frame = 0
BLAST of Csor.00g037840 vs. ExPASy TrEMBL
Match: A0A6J1IHD5 (uncharacterized protein LOC111476958 OS=Cucurbita maxima OX=3661 GN=LOC111476958 PE=4 SV=1) HSP 1 Score: 135 bits (339), Expect = 1.58e-39 Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 0
BLAST of Csor.00g037840 vs. ExPASy TrEMBL
Match: A0A6J1F6C2 (uncharacterized protein LOC111442587 OS=Cucurbita moschata OX=3662 GN=LOC111442587 PE=4 SV=1) HSP 1 Score: 135 bits (339), Expect = 1.58e-39 Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 0
BLAST of Csor.00g037840 vs. ExPASy TrEMBL
Match: A0A6J1CCW1 (uncharacterized protein LOC111010342 OS=Momordica charantia OX=3673 GN=LOC111010342 PE=4 SV=1) HSP 1 Score: 119 bits (298), Expect = 2.82e-33 Identity = 65/77 (84.42%), Postives = 68/77 (88.31%), Query Frame = 0
BLAST of Csor.00g037840 vs. ExPASy TrEMBL
Match: A0A5A7SZV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001550 PE=4 SV=1) HSP 1 Score: 117 bits (293), Expect = 1.68e-32 Identity = 63/77 (81.82%), Postives = 68/77 (88.31%), Query Frame = 0
BLAST of Csor.00g037840 vs. ExPASy TrEMBL
Match: A0A0A0LFX0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851790 PE=4 SV=1) HSP 1 Score: 112 bits (280), Expect = 1.56e-30 Identity = 61/77 (79.22%), Postives = 66/77 (85.71%), Query Frame = 0
BLAST of Csor.00g037840 vs. TAIR 10
Match: AT3G13677.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 24 Blast hits to 24 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 74.7 bits (182), Expect = 4.3e-14 Identity = 41/63 (65.08%), Postives = 49/63 (77.78%), Query Frame = 0
BLAST of Csor.00g037840 vs. TAIR 10
Match: AT3G13677.1 (unknown protein; Has 24 Blast hits to 24 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 2.7e-08 Identity = 29/51 (56.86%), Postives = 37/51 (72.55%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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