Csor.00g037510 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g037510
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein NDR1-like
Location	Csor_Chr09: 4877068 .. 4877688 (-)
RNA-Seq Expression	Csor.00g037510
Synteny	Csor.00g037510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGAACCCGGCGGCTGCTGCCGGTGTTGTTTCAGCTTCATCTTAACTTCCGGCTTCGCTGCTCTGTTCTTATGGCTCAGCCTTCGAACCCGCAAACCCAAATGCTCCATCGAACATTTTTACATTCCAGCCTTAAATCAATCCCTAAATTCGCCTTTAAATTCCACCGTCTCCTTCGATCTGCGCCTCAAAAACCAGAACAAAGACAAATCAGTCTTCTACGACTCTCTCAATCTCAACCTCACACTCGTCGGAGCGGCCGCCGGCGGCAGCCGGCGGCCGCTGGGCAACGTGACAGTGCCCGGATTCCACCAAGGCCGCGGCAAGAAGGCGTTCAGAAACGAGATCATCGAGACCCGTGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGGCGGCGGTTTTCCGGCTGGATTTGGCGACGGCGGTCCGGTTCAAGATCTTGTTCTGGAATACCAAGAGGGAGAATTTGAGAGTCGGAGCGGAGTTCAAAGTCAACGAGCAGGGAGCGACGGAATACCCAGGGATTACTCTTAGCTCCGGCGCCGCCGTGCCCGACGGCTCGCCGGTGAGGGTTATTTGGAGTTTTTGGGTGTTTGTCTTGTGGAAACTTTTCTGA

mRNA sequence

ATGACGGAACCCGGCGGCTGCTGCCGGTGTTGTTTCAGCTTCATCTTAACTTCCGGCTTCGCTGCTCTGTTCTTATGGCTCAGCCTTCGAACCCGCAAACCCAAATGCTCCATCGAACATTTTTACATTCCAGCCTTAAATCAATCCCTAAATTCGCCTTTAAATTCCACCGTCTCCTTCGATCTGCGCCTCAAAAACCAGAACAAAGACAAATCAGTCTTCTACGACTCTCTCAATCTCAACCTCACACTCGTCGGAGCGGCCGCCGGCGGCAGCCGGCGGCCGCTGGGCAACGTGACAGTGCCCGGATTCCACCAAGGCCGCGGCAAGAAGGCGTTCAGAAACGAGATCATCGAGACCCGTGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGGCGGCGGTTTTCCGGCTGGATTTGGCGACGGCGGTCCGGTTCAAGATCTTGTTCTGGAATACCAAGAGGGAGAATTTGAGAGTCGGAGCGGAGTTCAAAGTCAACGAGCAGGGAGCGACGGAATACCCAGGGATTACTCTTAGCTCCGGCGCCGCCGTGCCCGACGGCTCGCCGGTGAGGGTTATTTGGAGTTTTTGGGTGTTTGTCTTGTGGAAACTTTTCTGA

Coding sequence (CDS)

ATGACGGAACCCGGCGGCTGCTGCCGGTGTTGTTTCAGCTTCATCTTAACTTCCGGCTTCGCTGCTCTGTTCTTATGGCTCAGCCTTCGAACCCGCAAACCCAAATGCTCCATCGAACATTTTTACATTCCAGCCTTAAATCAATCCCTAAATTCGCCTTTAAATTCCACCGTCTCCTTCGATCTGCGCCTCAAAAACCAGAACAAAGACAAATCAGTCTTCTACGACTCTCTCAATCTCAACCTCACACTCGTCGGAGCGGCCGCCGGCGGCAGCCGGCGGCCGCTGGGCAACGTGACAGTGCCCGGATTCCACCAAGGCCGCGGCAAGAAGGCGTTCAGAAACGAGATCATCGAGACCCGTGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGGCGGCGGTTTTCCGGCTGGATTTGGCGACGGCGGTCCGGTTCAAGATCTTGTTCTGGAATACCAAGAGGGAGAATTTGAGAGTCGGAGCGGAGTTCAAAGTCAACGAGCAGGGAGCGACGGAATACCCAGGGATTACTCTTAGCTCCGGCGCCGCCGTGCCCGACGGCTCGCCGGTGAGGGTTATTTGGAGTTTTTGGGTGTTTGTCTTGTGGAAACTTTTCTGA

Protein sequence

MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSFDLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIETRGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLSSGAAVPDGSPVRVIWSFWVFVLWKLF

Homology

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BLAST of Csor.00g037510 vs. ExPASy Swiss-Prot
Match: O48915 (Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.8e-39
Identity = 93/208 (44.71%), Postives = 126/208 (60.58%), Query Frame = 0


Query: 2   TEPG-GCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 61
           TE G  CC CC SFI T+G  +LFLWLSLR  KPKCSI++F+IPAL +  NS  N+T++F
Sbjct: 8   TEGGRNCCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNF 67

Query: 62  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRR--PLGNVTVPGFHQGRGKKAFRNEII 121
            +R  N NKDK ++YD ++LN + +      S     +GN TVP F+QG  KKA +   +
Sbjct: 68  MVRCDNPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQV 127

Query: 122 E--TRGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGA-TEYP 181
           +        +AV  NG+AVFRLDL T VRFKI+FW TKR  + VGA+ +VN  G   +  
Sbjct: 128 KPLNNQTVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQKK 187

Query: 182 GITL---SSGAAVPDGSPVRVIWSFWVF 201
           GI +    S   +    P+ V+ +  VF
Sbjct: 188 GIKMKKSDSSFPLRSSFPISVLMNLLVF 215

[Close]

BLAST of Csor.00g037510 vs. NCBI nr
Match: KAG6592022.1 (Protein NDR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 421 bits (1081), Expect = 1.70e-148
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60
           MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIET 120
           DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIET
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIET 120

Query: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180
           RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180

Query: 181 SGAAVPDGSPVRVIWSFWVFVLWKLF 206
           SGAAVPDGSPVRVIWSFWVFVLWKLF
Sbjct: 181 SGAAVPDGSPVRVIWSFWVFVLWKLF 206

[Close]

BLAST of Csor.00g037510 vs. NCBI nr
Match: KAG7024897.1 (Protein NDR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 419 bits (1076), Expect = 9.81e-148
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60
           MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIET 120
           DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNE IET
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIET 120

Query: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180
           RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180

Query: 181 SGAAVPDGSPVRVIWSFWVFVLWKLF 206
           SGAAVPDGSPVRVIWSFWVFVLWKLF
Sbjct: 181 SGAAVPDGSPVRVIWSFWVFVLWKLF 206

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BLAST of Csor.00g037510 vs. NCBI nr
Match: XP_022935836.1 (protein NDR1-like [Cucurbita moschata])

HSP 1 Score: 417 bits (1072), Expect = 4.00e-147
Identity = 204/206 (99.03%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60
           MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIET 120
           DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNE IET
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIET 120

Query: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180
           RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180

Query: 181 SGAAVPDGSPVRVIWSFWVFVLWKLF 206
           SG AVPDGSPVRVIWSFWVFVLWKLF
Sbjct: 181 SGVAVPDGSPVRVIWSFWVFVLWKLF 206

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BLAST of Csor.00g037510 vs. NCBI nr
Match: XP_023535135.1 (protein NDR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391 bits (1004), Expect = 7.54e-137
Identity = 194/206 (94.17%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60
           MTE GGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIET 120
           DLRLKNQNKDKSVFYDSLNLNLTLVG      RRPLGNVTVPGFHQGRGKKAFRNE IET
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVG------RRPLGNVTVPGFHQGRGKKAFRNETIET 120

Query: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180
           RGVDWKAVSRNG+A+FRLDLATAVRFKILFWNTKRENLRVGAEFKVN QGATEYPGITLS
Sbjct: 121 RGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYPGITLS 180

Query: 181 SGAAVPDGSPVRVIWSFWVFVLWKLF 206
           SGAAV DGSPVRVIWSFWVFVLWKLF
Sbjct: 181 SGAAVLDGSPVRVIWSFWVFVLWKLF 200

[Close]

BLAST of Csor.00g037510 vs. NCBI nr
Match: XP_022976581.1 (protein NDR1-like [Cucurbita maxima])

HSP 1 Score: 383 bits (984), Expect = 8.44e-134
Identity = 190/206 (92.23%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60
           MTE GGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIE FYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIET 120
           DLRLKNQNKDKSVFYDSLNLNLTLVG       RPLGNVTVPGFHQGRGKKAFRNE IE 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGG------RPLGNVTVPGFHQGRGKKAFRNETIEA 120

Query: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180
           RGVDWKAVSRNG+A+FRLDLATAVRFKILFWNTKRENLRVGAEFKVN+QGATEYPGITLS
Sbjct: 121 RGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYPGITLS 180

Query: 181 SGAAVPDGSPVRVIWSFWVFVLWKLF 206
           SGAAVPDGSPV VIWS WVFVLWKLF
Sbjct: 181 SGAAVPDGSPVTVIWSSWVFVLWKLF 200

[Close]

BLAST of Csor.00g037510 vs. ExPASy TrEMBL
Match: A0A6J1F5U5 (protein NDR1-like OS=Cucurbita moschata OX=3662 GN=LOC111442624 PE=4 SV=1)

HSP 1 Score: 417 bits (1072), Expect = 1.94e-147
Identity = 204/206 (99.03%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60
           MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIET 120
           DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNE IET
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIET 120

Query: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180
           RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180

Query: 181 SGAAVPDGSPVRVIWSFWVFVLWKLF 206
           SG AVPDGSPVRVIWSFWVFVLWKLF
Sbjct: 181 SGVAVPDGSPVRVIWSFWVFVLWKLF 206

[Close]

BLAST of Csor.00g037510 vs. ExPASy TrEMBL
Match: A0A6J1IH99 (protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1)

HSP 1 Score: 383 bits (984), Expect = 4.09e-134
Identity = 190/206 (92.23%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60
           MTE GGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIE FYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIET 120
           DLRLKNQNKDKSVFYDSLNLNLTLVG       RPLGNVTVPGFHQGRGKKAFRNE IE 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGG------RPLGNVTVPGFHQGRGKKAFRNETIEA 120

Query: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180
           RGVDWKAVSRNG+A+FRLDLATAVRFKILFWNTKRENLRVGAEFKVN+QGATEYPGITLS
Sbjct: 121 RGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYPGITLS 180

Query: 181 SGAAVPDGSPVRVIWSFWVFVLWKLF 206
           SGAAVPDGSPV VIWS WVFVLWKLF
Sbjct: 181 SGAAVPDGSPVTVIWSSWVFVLWKLF 200

[Close]

BLAST of Csor.00g037510 vs. ExPASy TrEMBL
Match: A0A6J1CEH8 (protein NDR1-like OS=Momordica charantia OX=3673 GN=LOC111010486 PE=4 SV=1)

HSP 1 Score: 309 bits (792), Expect = 8.22e-105
Identity = 158/205 (77.07%), Postives = 169/205 (82.44%), Query Frame = 0


Query: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60
           MTE GGC RCCFSFILTSGF ALFLWLSLRT KPKCSIE FYIPALNQSLNS  +STV F
Sbjct: 1   MTEAGGCGRCCFSFILTSGFTALFLWLSLRTHKPKCSIESFYIPALNQSLNSSSDSTVFF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIET 120
           DLRLKNQNKDKSVFYD++NLNLTLV     G RRP+GN+TV GFHQGR KKAFR   +E 
Sbjct: 61  DLRLKNQNKDKSVFYDAINLNLTLVD----GGRRPVGNLTVAGFHQGRDKKAFRKGQVEA 120

Query: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GITL 180
           RGVDWKAV RNG+AVFRLDLATAVR+KILFW TKR+NLRVGAE KVN QGA EYP GITL
Sbjct: 121 RGVDWKAVRRNGSAVFRLDLATAVRYKILFWKTKRDNLRVGAEVKVNAQGAKEYPHGITL 180

Query: 181 SSGAAVPDGSPVRVIWSFWVFVLWK 204
           SSGAAV   SP   +WS    +LWK
Sbjct: 181 SSGAAVAGRSPAGALWSVGALILWK 201

[Close]

BLAST of Csor.00g037510 vs. ExPASy TrEMBL
Match: A0A5A7TYN2 (Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00260 PE=4 SV=1)

HSP 1 Score: 304 bits (778), Expect = 1.15e-102
Identity = 152/206 (73.79%), Postives = 171/206 (83.01%), Query Frame = 0


Query: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNST-VS 60
           MTE G CC+CCF FI+T+GFAALFLWLSLRTRKPKCSIE FYIPALNQSLNS  NST + 
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIE 120
           FDLRLKNQNKDKSV+YD++ LN TL+  A    RRP+GN+TVPGFHQGR KKA R E +E
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEA----RRPVGNLTVPGFHQGRDKKALRKESVE 120

Query: 121 TRGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GIT 180
            RGVDWKAVSRNG+ + RLDLATAVR+KIL W TKRENLR+G E KVN QG  + P GIT
Sbjct: 121 ARGVDWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGIT 180

Query: 181 LSSGAAVPDGSPVRVIWSFWVFVLWK 204
           L+SGAA+P G+ VRVIWSFWVFV WK
Sbjct: 181 LNSGAAMPGGTLVRVIWSFWVFVWWK 202

[Close]

BLAST of Csor.00g037510 vs. ExPASy TrEMBL
Match: A0A1S3BZM3 (protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1)

HSP 1 Score: 304 bits (778), Expect = 1.15e-102
Identity = 152/206 (73.79%), Postives = 171/206 (83.01%), Query Frame = 0


Query: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNST-VS 60
           MTE G CC+CCF FI+T+GFAALFLWLSLRTRKPKCSIE FYIPALNQSLNS  NST + 
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIE 120
           FDLRLKNQNKDKSV+YD++ LN TL+  A    RRP+GN+TVPGFHQGR KKA R E +E
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEA----RRPVGNLTVPGFHQGRDKKALRKESVE 120

Query: 121 TRGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYP-GIT 180
            RGVDWKAVSRNG+ + RLDLATAVR+KIL W TKRENLR+G E KVN QG  + P GIT
Sbjct: 121 ARGVDWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGIT 180

Query: 181 LSSGAAVPDGSPVRVIWSFWVFVLWK 204
           L+SGAA+P G+ VRVIWSFWVFV WK
Sbjct: 181 LNSGAAMPGGTLVRVIWSFWVFVWWK 202

[Close]

BLAST of Csor.00g037510 vs. TAIR 10
Match: AT3G20600.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 162.9 bits (411), Expect = 2.7e-40
Identity = 93/208 (44.71%), Postives = 126/208 (60.58%), Query Frame = 0


Query: 2   TEPG-GCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 61
           TE G  CC CC SFI T+G  +LFLWLSLR  KPKCSI++F+IPAL +  NS  N+T++F
Sbjct: 8   TEGGRNCCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNF 67

Query: 62  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRR--PLGNVTVPGFHQGRGKKAFRNEII 121
            +R  N NKDK ++YD ++LN + +      S     +GN TVP F+QG  KKA +   +
Sbjct: 68  MVRCDNPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQV 127

Query: 122 E--TRGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGA-TEYP 181
           +        +AV  NG+AVFRLDL T VRFKI+FW TKR  + VGA+ +VN  G   +  
Sbjct: 128 KPLNNQTVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQKK 187

Query: 182 GITL---SSGAAVPDGSPVRVIWSFWVF 201
           GI +    S   +    P+ V+ +  VF
Sbjct: 188 GIKMKKSDSSFPLRSSFPISVLMNLLVF 215

[Close]

BLAST of Csor.00g037510 vs. TAIR 10
Match: AT3G20590.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 145.2 bits (365), Expect = 5.8e-35
Identity = 81/175 (46.29%), Postives = 109/175 (62.29%), Query Frame = 0


Query: 7   CCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSFDLRLKN 66
           CC C F FI T+   AL LWLSLR +KPKCSI++FYIPAL+++L+S  N+T++F +R  N
Sbjct: 14  CCTCFFKFIFTTRLGALILWLSLRAKKPKCSIQNFYIPALSKNLSSRDNTTLNFMVRCDN 73

Query: 67  QNKDKSVFYDSLNLNLTLVGAAAGGSRR--PLGNVTVPGFHQGRGKKAFRNEIIETRGVD 126
            NKDK ++YD ++L  + +      S     + N TVP F+QG  KKA      +  G  
Sbjct: 74  PNKDKGIYYDDVHLTFSTINTTTTNSSDLVLVANYTVPKFYQGHKKKA------KKWGQV 133

Query: 127 W--------KAVSRNGAAVFRLDLATAVRFKILFWNTK-RENLRVGAEFKVNEQG 171
           W        +AV  NG+AVFRLDL T VRFKI+FW TK    ++VGA+ +VN  G
Sbjct: 134 WPLNNQTVLRAVLPNGSAVFRLDLKTHVRFKIVFWKTKWYRRIKVGADVEVNGDG 182

[Close]

BLAST of Csor.00g037510 vs. TAIR 10
Match: AT3G20610.1 (non-race specific disease resistance protein, putative )

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-26
Identity = 72/190 (37.89%), Postives = 105/190 (55.26%), Query Frame = 0


Query: 13  SFILTSGFAALFLWLS-LRTRKPKCSIEHFYIPALNQSLNSPLNSTVSFDLRLKNQNKDK 72
           + +  S   AL LWLS L    P+CSI +FYIPALN+SL S  N+T++F +RLKN N  +
Sbjct: 19  TLLYVSFLLALCLWLSTLVHHIPRCSIHYFYIPALNKSLISSDNTTLNFMVRLKNINAKQ 78

Query: 73  SVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKA--------FRNEIIETRGV 132
            ++Y+ L+L+ +        S   + N TVP F+QG  KKA        F N+ +     
Sbjct: 79  GIYYEDLHLSFS---TRINNSSLLVANYTVPRFYQGHEKKAKKWGQALPFNNQTV----- 138

Query: 133 DWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLSSGA 192
             +AV  NG+A+FR+DL   V++K++ W TKR  L+     +VNE GAT+          
Sbjct: 139 -IQAVLPNGSAIFRVDLKMQVKYKVMSWKTKRYKLKASVNLEVNEDGATKVKDKEDGIKM 198

Query: 193 AVPDGSPVRV 194
            + D SP R+
Sbjct: 199 KISDSSPQRL 199

[Close]

BLAST of Csor.00g037510 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 57.8 bits (138), Expect = 1.2e-08
Identity = 42/170 (24.71%), Postives = 71/170 (41.76%), Query Frame = 0


Query: 11  CFSFILT---SGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSFDLRLKNQ 70
           C  F+L     G  A  LWLSLR  +P+  I+ F +  L+Q      N+ ++F++ + N 
Sbjct: 47  CAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQPTGVE-NARIAFNVTILNP 106

Query: 71  NKDKSVFYDSL-------NLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIET 130
           N+   V++DS+       +  + L+       ++P     V G   G       N     
Sbjct: 107 NQHMGVYFDSMEGSIYYKDQRVGLIPLLNPFFQQPTNTTIVTGTLTGASLTVNSN----- 166

Query: 131 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQG 171
           R  ++      G   FRLD+ + +RFK+  W +K   +       V   G
Sbjct: 167 RWTEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVVGRDG 210

The following BLAST results are available for this feature:

BLAST of Csor.00g037510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48915	3.8e-39	44.71	Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1	[more]

BLAST of Csor.00g037510 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6592022.1	1.70e-148	100.00	Protein NDR1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7024897.1	9.81e-148	99.51	Protein NDR1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022935836.1	4.00e-147	99.03	protein NDR1-like [Cucurbita moschata]	[more]
XP_023535135.1	7.54e-137	94.17	protein NDR1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022976581.1	8.44e-134	92.23	protein NDR1-like [Cucurbita maxima]	[more]

BLAST of Csor.00g037510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5U5	1.94e-147	99.03	protein NDR1-like OS=Cucurbita moschata OX=3662 GN=LOC111442624 PE=4 SV=1	[more]
A0A6J1IH99	4.09e-134	92.23	protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1	[more]
A0A6J1CEH8	8.22e-105	77.07	protein NDR1-like OS=Momordica charantia OX=3673 GN=LOC111010486 PE=4 SV=1	[more]
A0A5A7TYN2	1.15e-102	73.79	Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0...	[more]
A0A1S3BZM3	1.15e-102	73.79	protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1	[more]

BLAST of Csor.00g037510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20600.1	2.7e-40	44.71	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20590.1	5.8e-35	46.29	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20610.1	1.3e-26	37.89	non-race specific disease resistance protein, putative	[more]
AT4G05220.1	1.2e-08	24.71	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31415:SF52	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY-RELATED	coord: 4..184
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 4..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g037510.m01	Csor.00g037510.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane