Csor.00g037310 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g037310
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionLRR receptor-like serine/threonine-protein kinase GSO1-like
LocationCsor_Chr09: 5013315 .. 5013629 (-)
RNA-Seq ExpressionCsor.00g037310
SyntenyCsor.00g037310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAACTGTTTGCGGCGGGATGGCGCGGCGGCGCAGTGGGCCGGCGAGGAGTGGGACTTCCTAGCGGCGGAGGACGACGGCCGGGAAGGGCTTCTCGGCGAAATCGAGAAGAAAAAGAGTTCAACGGCGGCGACAGAGGTGAAGATTAAGATCACGAAGAGACAGCTGGAGGAGCTTTTGGGGAAAGTGGATATTAAGGAGATGTCCGTACAGCAGGTTCTGGCTCAGTTGATCGGCGTCGGCGATCAGTTTCACGAATCTCGCCACCGTCACTGGCGGCCGGTGTTGCAGAGTATACCGGAAGTTGATTGA

mRNA sequence

ATGGGCAACTGTTTGCGGCGGGATGGCGCGGCGGCGCAGTGGGCCGGCGAGGAGTGGGACTTCCTAGCGGCGGAGGACGACGGCCGGGAAGGGCTTCTCGGCGAAATCGAGAAGAAAAAGAGTTCAACGGCGGCGACAGAGGTGAAGATTAAGATCACGAAGAGACAGCTGGAGGAGCTTTTGGGGAAAGTGGATATTAAGGAGATGTCCGTACAGCAGGTTCTGGCTCAGTTGATCGGCGTCGGCGATCAGTTTCACGAATCTCGCCACCGTCACTGGCGGCCGGTGTTGCAGAGTATACCGGAAGTTGATTGA

Coding sequence (CDS)

ATGGGCAACTGTTTGCGGCGGGATGGCGCGGCGGCGCAGTGGGCCGGCGAGGAGTGGGACTTCCTAGCGGCGGAGGACGACGGCCGGGAAGGGCTTCTCGGCGAAATCGAGAAGAAAAAGAGTTCAACGGCGGCGACAGAGGTGAAGATTAAGATCACGAAGAGACAGCTGGAGGAGCTTTTGGGGAAAGTGGATATTAAGGAGATGTCCGTACAGCAGGTTCTGGCTCAGTTGATCGGCGTCGGCGATCAGTTTCACGAATCTCGCCACCGTCACTGGCGGCCGGTGTTGCAGAGTATACCGGAAGTTGATTGA

Protein sequence

MGNCLRRDGAAAQWAGEEWDFLAAEDDGREGLLGEIEKKKSSTAATEVKIKITKRQLEELLGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD
Homology
BLAST of Csor.00g037310 vs. NCBI nr
Match: XP_022936225.1 (uncharacterized protein LOC111442898 [Cucurbita moschata] >KAG6592042.1 hypothetical protein SDJN03_14388, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024918.1 hypothetical protein SDJN02_13738, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209 bits (532), Expect = 4.20e-68
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0

Query: 1   MGNCLRRDGAAAQWAGEEWDFLAAEDDGREGLLGEIEKKKSSTAATEVKIKITKRQLEEL 60
           MGNCLRRDGAAAQWAGEEWDFLAAEDDGREGLLGEIEKKKSSTAATEVKIKITKRQLEEL
Sbjct: 1   MGNCLRRDGAAAQWAGEEWDFLAAEDDGREGLLGEIEKKKSSTAATEVKIKITKRQLEEL 60

Query: 61  LGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104
           LGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD
Sbjct: 61  LGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104

BLAST of Csor.00g037310 vs. NCBI nr
Match: XP_023536165.1 (uncharacterized protein LOC111797410 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206 bits (523), Expect = 9.91e-67
Identity = 102/104 (98.08%), Postives = 103/104 (99.04%), Query Frame = 0

Query: 1   MGNCLRRDGAAAQWAGEEWDFLAAEDDGREGLLGEIEKKKSSTAATEVKIKITKRQLEEL 60
           MGNC+RRDGAAAQWAGEEWDFLAAEDDGREGLLGEIEKKKSSTAATEVKIKITKRQLEEL
Sbjct: 1   MGNCIRRDGAAAQWAGEEWDFLAAEDDGREGLLGEIEKKKSSTAATEVKIKITKRQLEEL 60

Query: 61  LGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104
           LGKVDIKEMSVQQVLAQLIGV DQFHESRHRHWRPVLQSIPEVD
Sbjct: 61  LGKVDIKEMSVQQVLAQLIGVDDQFHESRHRHWRPVLQSIPEVD 104

BLAST of Csor.00g037310 vs. NCBI nr
Match: XP_022975730.1 (uncharacterized protein LOC111475920 [Cucurbita maxima])

HSP 1 Score: 202 bits (515), Expect = 1.65e-65
Identity = 101/104 (97.12%), Postives = 101/104 (97.12%), Query Frame = 0

Query: 1   MGNCLRRDGAAAQWAGEEWDFLAAEDDGREGLLGEIEKKKSSTAATEVKIKITKRQLEEL 60
           MGNCLRRDGAAAQWAGEEWD LAAEDDGREGLLGE EKKKSST ATEVKIKITKRQLEEL
Sbjct: 1   MGNCLRRDGAAAQWAGEEWDLLAAEDDGREGLLGENEKKKSSTTATEVKIKITKRQLEEL 60

Query: 61  LGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104
           LGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD
Sbjct: 61  LGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104

BLAST of Csor.00g037310 vs. NCBI nr
Match: XP_038896531.1 (uncharacterized protein LOC120084782 [Benincasa hispida])

HSP 1 Score: 171 bits (433), Expect = 6.40e-53
Identity = 90/110 (81.82%), Postives = 95/110 (86.36%), Query Frame = 0

Query: 1   MGNCLRRDGAAAQWAGEEWDFLAAED-DGREGLLGEIEKKK-----SSTAATEVKIKITK 60
           MGNCLRRD A AQWAGE+WDFLAAE  DG+EGLL + EKKK     +ST A  VKIKITK
Sbjct: 1   MGNCLRRDDAVAQWAGEDWDFLAAEGHDGQEGLLRDGEKKKCSAAVASTTAATVKIKITK 60

Query: 61  RQLEELLGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104
           RQLEELLGKVDIKE+SVQQVLAQLIGVGDQFHESRHRHWRPVLQ IPEVD
Sbjct: 61  RQLEELLGKVDIKEISVQQVLAQLIGVGDQFHESRHRHWRPVLQCIPEVD 110

BLAST of Csor.00g037310 vs. NCBI nr
Match: XP_022139678.1 (uncharacterized protein LOC111010526 [Momordica charantia])

HSP 1 Score: 147 bits (370), Expect = 1.67e-43
Identity = 75/104 (72.12%), Postives = 81/104 (77.88%), Query Frame = 0

Query: 1   MGNCLRRDGAAAQWAGEEWDFLAAEDDGREGLLGEIEKKKSSTAATEVKIKITKRQLEEL 60
           MGNCLRRDGAA +WAGEEW FLA E  G             + AATEVKIKITK+QLEEL
Sbjct: 1   MGNCLRRDGAAERWAGEEWGFLAEEKQGSAAA--------PTAAATEVKIKITKKQLEEL 60

Query: 61  LGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104
           LGK D+K +SVQQVLAQLI VGDQFHESRHR WRPVLQSIPE+D
Sbjct: 61  LGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSIPEMD 96

BLAST of Csor.00g037310 vs. ExPASy TrEMBL
Match: A0A6J1FD17 (uncharacterized protein LOC111442898 OS=Cucurbita moschata OX=3662 GN=LOC111442898 PE=4 SV=1)

HSP 1 Score: 209 bits (532), Expect = 2.03e-68
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0

Query: 1   MGNCLRRDGAAAQWAGEEWDFLAAEDDGREGLLGEIEKKKSSTAATEVKIKITKRQLEEL 60
           MGNCLRRDGAAAQWAGEEWDFLAAEDDGREGLLGEIEKKKSSTAATEVKIKITKRQLEEL
Sbjct: 1   MGNCLRRDGAAAQWAGEEWDFLAAEDDGREGLLGEIEKKKSSTAATEVKIKITKRQLEEL 60

Query: 61  LGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104
           LGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD
Sbjct: 61  LGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104

BLAST of Csor.00g037310 vs. ExPASy TrEMBL
Match: A0A6J1IHJ3 (uncharacterized protein LOC111475920 OS=Cucurbita maxima OX=3661 GN=LOC111475920 PE=4 SV=1)

HSP 1 Score: 202 bits (515), Expect = 7.97e-66
Identity = 101/104 (97.12%), Postives = 101/104 (97.12%), Query Frame = 0

Query: 1   MGNCLRRDGAAAQWAGEEWDFLAAEDDGREGLLGEIEKKKSSTAATEVKIKITKRQLEEL 60
           MGNCLRRDGAAAQWAGEEWD LAAEDDGREGLLGE EKKKSST ATEVKIKITKRQLEEL
Sbjct: 1   MGNCLRRDGAAAQWAGEEWDLLAAEDDGREGLLGENEKKKSSTTATEVKIKITKRQLEEL 60

Query: 61  LGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104
           LGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD
Sbjct: 61  LGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104

BLAST of Csor.00g037310 vs. ExPASy TrEMBL
Match: A0A6J1CG88 (uncharacterized protein LOC111010526 OS=Momordica charantia OX=3673 GN=LOC111010526 PE=4 SV=1)

HSP 1 Score: 147 bits (370), Expect = 8.09e-44
Identity = 75/104 (72.12%), Postives = 81/104 (77.88%), Query Frame = 0

Query: 1   MGNCLRRDGAAAQWAGEEWDFLAAEDDGREGLLGEIEKKKSSTAATEVKIKITKRQLEEL 60
           MGNCLRRDGAA +WAGEEW FLA E  G             + AATEVKIKITK+QLEEL
Sbjct: 1   MGNCLRRDGAAERWAGEEWGFLAEEKQGSAAA--------PTAAATEVKIKITKKQLEEL 60

Query: 61  LGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104
           LGK D+K +SVQQVLAQLI VGDQFHESRHR WRPVLQSIPE+D
Sbjct: 61  LGKADVKGLSVQQVLAQLIAVGDQFHESRHRPWRPVLQSIPEMD 96

BLAST of Csor.00g037310 vs. ExPASy TrEMBL
Match: A0A5D2L6Y6 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D05G434100v1 PE=4 SV=1)

HSP 1 Score: 114 bits (285), Expect = 1.41e-30
Identity = 64/120 (53.33%), Postives = 81/120 (67.50%), Query Frame = 0

Query: 1   MGNCLRRDGAAAQWAGEEWDFLAA---EDDG-------REGLLGEIEKK------KSSTA 60
           MGNCLR   ++ QWAG++W    A   EDDG        +G++G+  +K       SS  
Sbjct: 1   MGNCLRHQ-SSTQWAGDDWGTTVADYGEDDGFSDIKTKEKGIVGDHHQKDGFITTSSSPT 60

Query: 61  ATEVKIKITKRQLEELLGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104
             EVK+KITK+QLEELLG+VD+KE+SVQQVLAQLI V +QF E+  R WRP LQSIPEV+
Sbjct: 61  VHEVKVKITKKQLEELLGRVDVKELSVQQVLAQLINVSNQFDETNQRSWRPALQSIPEVN 119

BLAST of Csor.00g037310 vs. ExPASy TrEMBL
Match: A0A5D2QUV4 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A04G022400v1 PE=4 SV=1)

HSP 1 Score: 113 bits (283), Expect = 2.83e-30
Identity = 63/120 (52.50%), Postives = 82/120 (68.33%), Query Frame = 0

Query: 1   MGNCLRRDGAAAQWAGEEWDFLAAE---DDG-------REGLLGEIEKK------KSSTA 60
           MGNCLR   ++ QWAG++W   AA+   DDG        +G++G+  +K       S+  
Sbjct: 1   MGNCLRHQ-SSTQWAGDDWGTTAADYGDDDGFSDIKTKEKGIVGDHHQKDGFITTSSTPT 60

Query: 61  ATEVKIKITKRQLEELLGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD 104
             EVK+KITK+QLEELLG+VD+KE+SVQQVLAQLI V +QF E+  R WRP LQSIPEV+
Sbjct: 61  VHEVKVKITKKQLEELLGRVDVKELSVQQVLAQLINVSNQFDETNQRSWRPALQSIPEVN 119

BLAST of Csor.00g037310 vs. TAIR 10
Match: AT3G20340.1 (Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. )

HSP 1 Score: 74.3 bits (181), Expect = 6.3e-14
Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 0

Query: 1   MGNCLRRDGAAAQWAGEEWDFLAAED------------DGREGLLGEIEKKKSSTAATEV 60
           MGNCLR + +   WAGE+WD    ED            DG+  ++      KSS  + E+
Sbjct: 1   MGNCLRHE-SEMHWAGEDWDEFITEDEEDHHYSSKTTRDGKPVIV--TRDSKSSVPSHEI 60

Query: 61  KIKITKRQLEELLGKVDIKEMSVQQVLAQLIGVGDQFHE--SRHRHWRPVLQSIPEVD 105
           KI++TK+QL +LL KV++ +++ QQ       + ++ +E  ++ R WRPVLQSIPEV+
Sbjct: 61  KIRLTKKQLHDLLSKVNVHDLTFQQQTFSCPILNNRGYEEANQQRLWRPVLQSIPEVN 115

BLAST of Csor.00g037310 vs. TAIR 10
Match: AT4G21920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20340.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 61.2 bits (147), Expect = 5.6e-10
Identity = 42/129 (32.56%), Postives = 69/129 (53.49%), Query Frame = 0

Query: 1   MGNCL-RRDGAAAQWAGEE------------WDFLAAEDDGREGLLGEIE-----KKKSS 60
           MGNC+   +     W+G++               +  ++D  E LLGE          SS
Sbjct: 1   MGNCICVTEKTTTSWSGDDNGSYNKRRRRRRSTVVHDDNDDGEKLLGETSNVTSTSSSSS 60

Query: 61  TAATEVKIKITKRQLEELLGKVDIKEMSVQQVLAQLI-GVGDQFHES------RHRHWRP 105
           +   E+KI+ITK++LE+L+  + +K ++ +++L++LI   GDQ   S       H+ W+P
Sbjct: 61  SERREIKIRITKKELEDLMRNIGLKSLTAEEILSKLIFEGGDQIGFSAVDVTNHHQPWKP 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022936225.14.20e-68100.00uncharacterized protein LOC111442898 [Cucurbita moschata] >KAG6592042.1 hypothet... [more]
XP_023536165.19.91e-6798.08uncharacterized protein LOC111797410 [Cucurbita pepo subsp. pepo][more]
XP_022975730.11.65e-6597.12uncharacterized protein LOC111475920 [Cucurbita maxima][more]
XP_038896531.16.40e-5381.82uncharacterized protein LOC120084782 [Benincasa hispida][more]
XP_022139678.11.67e-4372.12uncharacterized protein LOC111010526 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A6J1FD172.03e-68100.00uncharacterized protein LOC111442898 OS=Cucurbita moschata OX=3662 GN=LOC1114428... [more]
A0A6J1IHJ37.97e-6697.12uncharacterized protein LOC111475920 OS=Cucurbita maxima OX=3661 GN=LOC111475920... [more]
A0A6J1CG888.09e-4472.12uncharacterized protein LOC111010526 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A5D2L6Y61.41e-3053.33Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D05G434100v1 P... [more]
A0A5D2QUV42.83e-3052.50Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A04G022400v1 P... [more]
Match NameE-valueIdentityDescription
AT3G20340.16.3e-1438.14Expression of the gene is downregulated in the presence of paraquat, an inducer ... [more]
AT4G21920.15.6e-1032.56unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33647OS01G0793900 PROTEINcoord: 1..103
NoneNo IPR availablePANTHERPTHR33647:SF5OS01G0793900 PROTEINcoord: 1..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g037310.m01Csor.00g037310.m01mRNA