Csor.00g036430 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCTTCCTCTTCCTTCTCCTTCTTTCAATATTCTTCACTGCGGCCGCCTCCACCGCTGCCATCGCTGCCACGGCCCCCGCTCCTGCTCCAGCTTCCCCTTCAGGTACTCAGAATTTGTGTTTAGATTTTCGAATTTATATGCTCTGTAGATTCTTAAACACATGAATTATTCAATGAGACTGTTGTAATGTGCATATCCTCTAATAACCATTGGATCTAAGTTCGAGATCCTTCCTCCTCATGCATCAAACGGTGAAAAATTGTAAACAAGAAAGATCCGAAGCGAAGATATTTAAAATTTTGTGTTTGCATTGAGTAACCAAAATTTTTTTTTTAAAAAATACAAGATTTAATATTAATAGACTTTCAATTTTGATTTATCAATAGAAAAATAAAACGGGACAAGGTTAAATTAGTAATTTACCTCTAAATCATATGAAATTCTACCTCTTAACATACCGACACTTCAAAAACGTTGTTTGTATATCTAAAATGTTCTATTTCTACTTATTATAACTCTAACAACATTCTATTTCAGTTAAGACATGTACTTTGATCAATAAGTTAGGAACTCAATTTGTGTATAGTCTCACATGATTTTCAAAATTGAATAGTAATACACATTCAATTTTGATTTATCTGTAGAAAAATAAAACGGGACAAGGTTAAATTAGTAATTGACCTCTAAATCAAATGAAATTCCGTTTAACGTTTGTATATCTAAAATGCTCTAACTCTAACAACATTCGACATACTTTGATCAATAAATTAGGAACTCAAATTTTGTATACAGCATCACATTGTTTTTCGATTTTTACATGTCAATGAAATTTAATGAAACAAAACGCTCGCTCGTTCAAAAAGTTCTCGGAGTTTTGGGTACATAATTAAAGGTTAATGCAGCTTGTCCTCCAGTGGAGGCTGAGTATTGCCCAGTGGAGTTTGAATTTATGAACTACAGCATCATCACAAGCAAGTGCAAAGGGCCTGAATACCCAGCCAATCTTCGCTGCTCAGCTCTGGAAGAATTTGGTTGCCCCTACGCCAATTATATCAATGATTTAACCAATAACTGTGCCTCAATCATGTTCACTTATATTCATCTCTATGGAAACTACCCATCTGGCCTCTCTTTGCCTCCCTCTGCGTCAAAGAATCCATTGGTCTTCAATGCTCTAAAGCTAACTAAGCATCTTCCCACATTCATCCTTTGTATCTGA ATGCTTCTTCCTCTTCCTTCTCCTTCTTTCAATATTCTTCACTGCGGCCGCCTCCACCGCTGCCATCGCTGCCACGGCCCCCGCTCCTGCTCCAGCTTCCCCTTCAGCATCATCACAAGCAAGTGCAAAGGGCCTGAATACCCAGCCAATCTTCGCTGCTCAGCTCTGGAAGAATTTGGTTGCCCCTACGCCAATTATATCAATGATTTAACCAATAACTGTGCCTCAATCATGTTCACTTATATTCATCTCTATGGAAACTACCCATCTGGCCTCTCTTTGCCTCCCTCTGCGTCAAAGAATCCATTGGTCTTCAATGCTCTAAAGCTAACTAAGCATCTTCCCACATTCATCCTTTGTATCTGA ATGCTTCTTCCTCTTCCTTCTCCTTCTTTCAATATTCTTCACTGCGGCCGCCTCCACCGCTGCCATCGCTGCCACGGCCCCCGCTCCTGCTCCAGCTTCCCCTTCAGCATCATCACAAGCAAGTGCAAAGGGCCTGAATACCCAGCCAATCTTCGCTGCTCAGCTCTGGAAGAATTTGGTTGCCCCTACGCCAATTATATCAATGATTTAACCAATAACTGTGCCTCAATCATGTTCACTTATATTCATCTCTATGGAAACTACCCATCTGGCCTCTCTTTGCCTCCCTCTGCGTCAAAGAATCCATTGGTCTTCAATGCTCTAAAGCTAACTAAGCATCTTCCCACATTCATCCTTTGTATCTGA MLLPLPSPSFNILHCGRLHRCHRCHGPRSCSSFPFSIITSKCKGPEYPANLRCSALEEFGCPYANYINDLTNNCASIMFTYIHLYGNYPSGLSLPPSASKNPLVFNALKLTKHLPTFILCI Homology
BLAST of Csor.00g036430 vs. ExPASy Swiss-Prot
Match: Q6NLF4 (GPI-anchored protein LLG2 OS=Arabidopsis thaliana OX=3702 GN=LLG2 PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 5.3e-17 Identity = 35/58 (60.34%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of Csor.00g036430 vs. ExPASy Swiss-Prot
Match: Q9M0I0 (GPI-anchored protein LLG3 OS=Arabidopsis thaliana OX=3702 GN=LLG3 PE=2 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 5.9e-16 Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 0
BLAST of Csor.00g036430 vs. ExPASy Swiss-Prot
Match: Q9FKT1 (GPI-anchored protein LLG1 OS=Arabidopsis thaliana OX=3702 GN=LLG1 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 1.0e-15 Identity = 33/58 (56.90%), Postives = 46/58 (79.31%), Query Frame = 0
BLAST of Csor.00g036430 vs. ExPASy Swiss-Prot
Match: B3GS44 (GPI-anchored protein LORELEI OS=Arabidopsis thaliana OX=3702 GN=LRE PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 2.9e-15 Identity = 30/58 (51.72%), Postives = 45/58 (77.59%), Query Frame = 0
BLAST of Csor.00g036430 vs. NCBI nr
Match: KAG6592130.1 (GPI-anchored protein LLG2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 261 bits (667), Expect = 3.73e-88 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of Csor.00g036430 vs. NCBI nr
Match: XP_022936220.1 (GPI-anchored protein LLG1-like [Cucurbita moschata]) HSP 1 Score: 124 bits (312), Expect = 7.08e-34 Identity = 56/58 (96.55%), Postives = 57/58 (98.28%), Query Frame = 0
BLAST of Csor.00g036430 vs. NCBI nr
Match: XP_022139426.1 (GPI-anchored protein LLG2-like [Momordica charantia]) HSP 1 Score: 103 bits (258), Expect = 4.05e-25 Identity = 45/58 (77.59%), Postives = 52/58 (89.66%), Query Frame = 0
BLAST of Csor.00g036430 vs. NCBI nr
Match: XP_023524003.1 (GPI-anchored protein LLG1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 102 bits (254), Expect = 4.39e-25 Identity = 45/58 (77.59%), Postives = 50/58 (86.21%), Query Frame = 0
BLAST of Csor.00g036430 vs. NCBI nr
Match: KAG7037290.1 (GPI-anchored protein LLG1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 101 bits (251), Expect = 1.94e-24 Identity = 45/58 (77.59%), Postives = 50/58 (86.21%), Query Frame = 0
BLAST of Csor.00g036430 vs. ExPASy TrEMBL
Match: A0A6J1FD10 (GPI-anchored protein LLG1-like OS=Cucurbita moschata OX=3662 GN=LOC111442892 PE=4 SV=1) HSP 1 Score: 124 bits (312), Expect = 3.43e-34 Identity = 56/58 (96.55%), Postives = 57/58 (98.28%), Query Frame = 0
BLAST of Csor.00g036430 vs. ExPASy TrEMBL
Match: A0A6J1CCM2 (GPI-anchored protein LLG2-like OS=Momordica charantia OX=3673 GN=LOC111010362 PE=4 SV=1) HSP 1 Score: 103 bits (258), Expect = 1.96e-25 Identity = 45/58 (77.59%), Postives = 52/58 (89.66%), Query Frame = 0
BLAST of Csor.00g036430 vs. ExPASy TrEMBL
Match: A0A6J1J052 (GPI-anchored protein LLG1-like OS=Cucurbita maxima OX=3661 GN=LOC111480716 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 3.65e-24 Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = 0
BLAST of Csor.00g036430 vs. ExPASy TrEMBL
Match: A0A2I0A4N1 (GPI-anchored protein LORELEI OS=Apostasia shenzhenica OX=1088818 GN=LRE PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 4.32e-23 Identity = 41/58 (70.69%), Postives = 51/58 (87.93%), Query Frame = 0
BLAST of Csor.00g036430 vs. ExPASy TrEMBL
Match: A0A199UVP9 (GPI-anchored protein LORELEI OS=Ananas comosus OX=4615 GN=ACMD2_11860 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.07e-22 Identity = 46/85 (54.12%), Postives = 58/85 (68.24%), Query Frame = 0
BLAST of Csor.00g036430 vs. TAIR 10
Match: AT2G20700.1 (LORELEI-LIKE-GPI ANCHORED PROTEIN 2 ) HSP 1 Score: 88.6 bits (218), Expect = 3.8e-18 Identity = 35/58 (60.34%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of Csor.00g036430 vs. TAIR 10
Match: AT4G28280.1 (LORELEI-LIKE-GPI ANCHORED PROTEIN 3 ) HSP 1 Score: 85.1 bits (209), Expect = 4.2e-17 Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 0
BLAST of Csor.00g036430 vs. TAIR 10
Match: AT4G28280.2 (LORELEI-LIKE-GPI ANCHORED PROTEIN 3 ) HSP 1 Score: 85.1 bits (209), Expect = 4.2e-17 Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = 0
BLAST of Csor.00g036430 vs. TAIR 10
Match: AT5G56170.1 (LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 ) HSP 1 Score: 84.3 bits (207), Expect = 7.1e-17 Identity = 33/58 (56.90%), Postives = 46/58 (79.31%), Query Frame = 0
BLAST of Csor.00g036430 vs. TAIR 10
Match: AT4G26466.1 (lorelei ) HSP 1 Score: 82.8 bits (203), Expect = 2.1e-16 Identity = 30/58 (51.72%), Postives = 45/58 (77.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|