Csor.00g036370 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g036370
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Calcium-binding EF-hand family protein
Location	Csor_Chr09: 5706937 .. 5707392 (+)
RNA-Seq Expression	Csor.00g036370
Synteny	Csor.00g036370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCCATTCAACGCCTCCGATTTACAGAGGATTTTCGAAACGATTGACAGAAATGGCGACGGCTTCGTGAGCATCGAGGAGCTTCATTGGCTTCTTAATCGAACAGGCGTCGATTTCATTTCGGATGATCTCGAATCGTTAATAGGTAAATCGATGATTGATTTTGATGAATTCTTGTCTCTGTATGAATCGATTTCGGAGATGAACAGAGGAGGAGAGGAGATTGAGAGCGATCTTTTGAATGCATTCCAAGTGTTCGACGAAAATCACGATGGTTTTATTTCGTGCGATGAGCTTCACAATGTGTTGGTGAGGTTAGGGCTTTGGGATGATAAGCGCTGTGTGCGTGATTGTAGGCGCATGATTGGCGCGTTCGATGTCGATTTGGATGGGCGGCTTGATTTTGAGGAATTCAAGAACATGATGAACTACTCTTCTAATTCTTCGTCTTAG

mRNA sequence

ATGTCTCCATTCAACGCCTCCGATTTACAGAGGATTTTCGAAACGATTGACAGAAATGGCGACGGCTTCGTGAGCATCGAGGAGCTTCATTGGCTTCTTAATCGAACAGGCGTCGATTTCATTTCGGATGATCTCGAATCGTTAATAGGTAAATCGATGATTGATTTTGATGAATTCTTGTCTCTGTATGAATCGATTTCGGAGATGAACAGAGGAGGAGAGGAGATTGAGAGCGATCTTTTGAATGCATTCCAAGTGTTCGACGAAAATCACGATGGTTTTATTTCGTGCGATGAGCTTCACAATGTGTTGGTGAGGTTAGGGCTTTGGGATGATAAGCGCTGTGTGCGTGATTGTAGGCGCATGATTGGCGCGTTCGATGTCGATTTGGATGGGCGGCTTGATTTTGAGGAATTCAAGAACATGATGAACTACTCTTCTAATTCTTCGTCTTAG

Coding sequence (CDS)

ATGTCTCCATTCAACGCCTCCGATTTACAGAGGATTTTCGAAACGATTGACAGAAATGGCGACGGCTTCGTGAGCATCGAGGAGCTTCATTGGCTTCTTAATCGAACAGGCGTCGATTTCATTTCGGATGATCTCGAATCGTTAATAGGTAAATCGATGATTGATTTTGATGAATTCTTGTCTCTGTATGAATCGATTTCGGAGATGAACAGAGGAGGAGAGGAGATTGAGAGCGATCTTTTGAATGCATTCCAAGTGTTCGACGAAAATCACGATGGTTTTATTTCGTGCGATGAGCTTCACAATGTGTTGGTGAGGTTAGGGCTTTGGGATGATAAGCGCTGTGTGCGTGATTGTAGGCGCATGATTGGCGCGTTCGATGTCGATTTGGATGGGCGGCTTGATTTTGAGGAATTCAAGAACATGATGAACTACTCTTCTAATTCTTCGTCTTAG

Protein sequence

MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFLSLYESISEMNRGGEEIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDDKRCVRDCRRMIGAFDVDLDGRLDFEEFKNMMNYSSNSSS

Homology

[Close]

BLAST of Csor.00g036370 vs. ExPASy Swiss-Prot
Match: Q9LPK5 (Probable calcium-binding protein CML44 OS=Arabidopsis thaliana OX=3702 GN=CML44 PE=2 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 3.9e-25
Identity = 61/145 (42.07%), Postives = 94/145 (64.83%), Query Frame = 0


Query: 7   SDLQRIFETIDRNGDGFVSIEELHWLLNRTG-VDFISDDLESLIGKSMIDFDEFLSLYES 66
           +DL+R+F+T+D+N DG V+++EL W+L++ G  +   D+LE ++GK  +D DEFL  Y  
Sbjct: 9   NDLRRMFKTLDKNQDGLVTLDELLWILDKLGWAEHTPDELELIVGKQSLDLDEFLRFYYD 68

Query: 67  ISEMNRGGE-------EIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDDKRCVRD 126
               ++G +       + +  +  AF VFD N DG+IS +EL +VL RLG ++++    D
Sbjct: 69  AVLDSKGSKKNIDVVADNDEAIARAFNVFDVNGDGYISAEELRDVLERLG-FEEEAKAWD 128

Query: 127 CRRMIGAFDVDLDGRLDFEEFKNMM 144
           C RMI   D +LDG +DFEEFKNM+
Sbjct: 129 CGRMIRVHDKNLDGFVDFEEFKNMI 152

[Close]

BLAST of Csor.00g036370 vs. ExPASy Swiss-Prot
Match: Q9SVG9 (Calcium-binding protein CML42 OS=Arabidopsis thaliana OX=3702 GN=CML42 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.3e-24
Identity = 69/159 (43.40%), Postives = 94/159 (59.12%), Query Frame = 0


Query: 5   NASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLI------GKSMIDFDE 64
           NA  LQRIF+  D+NGDGF+++EEL   L R G++    DL+S +      G + ++FD+
Sbjct: 26  NALRLQRIFDLFDKNGDGFITVEELSQALTRLGLNADLSDLKSTVESYIQPGNTGLNFDD 85

Query: 65  FLSLYESISEMNRGG--------------EEIESDLLNAFQVFDENHDGFISCDELHNVL 124
           F SL++++ +   GG               E ESDL  AF+VFDEN DGFIS  EL  VL
Sbjct: 86  FSSLHKTLDDSFFGGACGGGENEDDPSSAAENESDLAEAFKVFDENGDGFISARELQTVL 145

Query: 125 VRLGLWDDKRCVRDCRRMIGAFDVDLDGRLDFEEFKNMM 144
            +LGL +     R   +MI + D + DGR+DF EFKNMM
Sbjct: 146 KKLGLPEGGEMER-VEKMIVSVDRNQDGRVDFFEFKNMM 183

[Close]

BLAST of Csor.00g036370 vs. ExPASy Swiss-Prot
Match: Q0JC44 (Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica OX=39947 GN=CML22 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.8e-23
Identity = 68/154 (44.16%), Postives = 89/154 (57.79%), Query Frame = 0


Query: 5   NASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLI------GKSMIDFDE 64
           +A++L R+FE  DRNGDG ++ EEL   L + G+   +D+L ++I      G   +D +E
Sbjct: 89  DAAELARVFELFDRNGDGRITREELEDSLGKLGIPVPADELAAVIARIDANGDGCVDVEE 148

Query: 65  FLSLYESI------SEMNRGGEEIE---SDLLNAFQVFDENHDGFISCDELHNVLVRLGL 124
           F  LY SI      S+  R  EE E    D+  AF+VFD N DG+I+ DEL  VL  LGL
Sbjct: 149 FGELYRSIMAGGDDSKDGRAKEEEEEEDGDMREAFRVFDANGDGYITVDELGAVLASLGL 208

Query: 125 WDDKRCVRDCRRMIGAFDVDLDGRLDFEEFKNMM 144
               R   +CRRMIG  D D DGR+DF EF  MM
Sbjct: 209 -KQGRTAEECRRMIGQVDRDGDGRVDFHEFLQMM 241

[Close]

BLAST of Csor.00g036370 vs. ExPASy Swiss-Prot
Match: Q0DZP5 (Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica OX=39947 GN=CML17 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.2e-23
Identity = 64/150 (42.67%), Postives = 86/150 (57.33%), Query Frame = 0


Query: 7   SDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLI------GKSMIDFDEFL 66
           ++L+R+FE  DR+GDG ++ EEL   L R G+    ++L + I      G   +D DEF 
Sbjct: 7   AELRRVFELFDRDGDGRITREELTESLERLGMPVHREELAATIARIDANGDGCVDMDEFT 66

Query: 67  SLYESISEMNRGG-------EEIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDDK 126
            LYE++  ++ GG       +  E+ +  AF VFD N DGFI+ DEL  VL  LG+    
Sbjct: 67  QLYETVMRVDGGGGGGGGACDVDEASMREAFDVFDRNGDGFITVDELGAVLASLGI-KQG 126

Query: 127 RCVRDCRRMIGAFDVDLDGRLDFEEFKNMM 144
           R   DC RMIG  D D DGR+DF EFK MM
Sbjct: 127 RTAEDCGRMIGQVDRDGDGRVDFLEFKQMM 155

[Close]

BLAST of Csor.00g036370 vs. ExPASy Swiss-Prot
Match: Q9FI19 (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana OX=3702 GN=CML43 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 6.2e-23
Identity = 65/151 (43.05%), Postives = 91/151 (60.26%), Query Frame = 0


Query: 5   NASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLI------GKSMIDFDE 64
           NA  L R+F+  D+N DGF+++EEL   L+R G+D    DL+S +       K+ + FD+
Sbjct: 25  NALRLHRVFDLFDKNNDGFITVEELSQALSRLGLDADFSDLKSTVDSFIKPDKTGLRFDD 84

Query: 65  FLSLYESISEMNRGGE------EIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDD 124
           F +L++++ E   GGE        ESDL  AF VFDE+ DGFIS  EL  VL +LGL  +
Sbjct: 85  FAALHKTLDESFFGGEGSCCDGSPESDLEEAFNVFDEDGDGFISAVELQKVLKKLGL-PE 144

Query: 125 KRCVRDCRRMIGAFDVDLDGRLDFEEFKNMM 144
              +    +MI + D + DGR+DF EFKNMM
Sbjct: 145 AGEIEQVEKMIVSVDSNHDGRVDFFEFKNMM 174

[Close]

BLAST of Csor.00g036370 vs. NCBI nr
Match: KAG6592136.1 (Calcium-binding protein CML42, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308 bits (788), Expect = 1.24e-105
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL 60
           MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL
Sbjct: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL 60

Query: 61  SLYESISEMNRGGEEIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDDKRCVRDCR 120
           SLYESISEMNRGGEEIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDDKRCVRDCR
Sbjct: 61  SLYESISEMNRGGEEIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDDKRCVRDCR 120

Query: 121 RMIGAFDVDLDGRLDFEEFKNMMNYSSNSSS 151
           RMIGAFDVDLDGRLDFEEFKNMMNYSSNSSS
Sbjct: 121 RMIGAFDVDLDGRLDFEEFKNMMNYSSNSSS 151

[Close]

BLAST of Csor.00g036370 vs. NCBI nr
Match: KAG7025009.1 (Calcium-binding protein CML42, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 303 bits (777), Expect = 5.90e-104
Identity = 149/151 (98.68%), Postives = 150/151 (99.34%), Query Frame = 0


Query: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL 60
           MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL
Sbjct: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL 60

Query: 61  SLYESISEMNRGGEEIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDDKRCVRDCR 120
           SLYESISEMNRGGEEIESDLLNAFQVFDEN DGFISCDELHNVLVRLGLWDD+RCVRDCR
Sbjct: 61  SLYESISEMNRGGEEIESDLLNAFQVFDENRDGFISCDELHNVLVRLGLWDDRRCVRDCR 120

Query: 121 RMIGAFDVDLDGRLDFEEFKNMMNYSSNSSS 151
           RMIGAFDVDLDGRLDFEEFKNMMNYSSNSSS
Sbjct: 121 RMIGAFDVDLDGRLDFEEFKNMMNYSSNSSS 151

[Close]

BLAST of Csor.00g036370 vs. NCBI nr
Match: XP_023536413.1 (probable calcium-binding protein CML44 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301 bits (770), Expect = 6.90e-103
Identity = 147/150 (98.00%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL 60
           MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL
Sbjct: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL 60

Query: 61  SLYESISEMNRGGEEIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDDKRCVRDCR 120
           SLYESISE+NRGGEEIESDLLNAFQVFDEN DGFISCDELHNVLVRLGLWDD+RCVRDCR
Sbjct: 61  SLYESISEINRGGEEIESDLLNAFQVFDENRDGFISCDELHNVLVRLGLWDDRRCVRDCR 120

Query: 121 RMIGAFDVDLDGRLDFEEFKNMMNYSSNSS 150
           RMIGAFDVDLDGRLDFEEFKNMMNYSSNSS
Sbjct: 121 RMIGAFDVDLDGRLDFEEFKNMMNYSSNSS 150

[Close]

BLAST of Csor.00g036370 vs. NCBI nr
Match: XP_022976028.1 (probable calcium-binding protein CML44 [Cucurbita maxima])

HSP 1 Score: 299 bits (765), Expect = 3.99e-102
Identity = 147/151 (97.35%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL 60
           MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKS IDFDEFL
Sbjct: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSKIDFDEFL 60

Query: 61  SLYESISEMNRGGEEIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDDKRCVRDCR 120
           SLYESISE+NRGGEEIESDLLNAFQVFDEN DGFISCDELHNVLVRLGLWDDKRCVRDCR
Sbjct: 61  SLYESISEINRGGEEIESDLLNAFQVFDENRDGFISCDELHNVLVRLGLWDDKRCVRDCR 120

Query: 121 RMIGAFDVDLDGRLDFEEFKNMMNYSSNSSS 151
           RMIGAFDVDLDGRLDFEEFKNMMNYSS+SSS
Sbjct: 121 RMIGAFDVDLDGRLDFEEFKNMMNYSSHSSS 151

[Close]

BLAST of Csor.00g036370 vs. NCBI nr
Match: XP_022936418.1 (probable calcium-binding protein CML44 [Cucurbita moschata])

HSP 1 Score: 298 bits (762), Expect = 1.14e-101
Identity = 146/150 (97.33%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL 60
           MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL
Sbjct: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL 60

Query: 61  SLYESISEMNRGGEEIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDDKRCVRDCR 120
           SLYESISE+NRGGEEIESDLLNAFQVFDEN DGFISCDELHNVLVRL LWDD+RCVRDCR
Sbjct: 61  SLYESISEINRGGEEIESDLLNAFQVFDENRDGFISCDELHNVLVRLELWDDRRCVRDCR 120

Query: 121 RMIGAFDVDLDGRLDFEEFKNMMNYSSNSS 150
           RMIGAFDVDLDGRLDFEEFKNMMNYSSNSS
Sbjct: 121 RMIGAFDVDLDGRLDFEEFKNMMNYSSNSS 150

[Close]

BLAST of Csor.00g036370 vs. ExPASy TrEMBL
Match: A0A6J1IKW9 (probable calcium-binding protein CML44 OS=Cucurbita maxima OX=3661 GN=LOC111476552 PE=4 SV=1)

HSP 1 Score: 299 bits (765), Expect = 1.93e-102
Identity = 147/151 (97.35%), Postives = 149/151 (98.68%), Query Frame = 0


Query: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL 60
           MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKS IDFDEFL
Sbjct: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSKIDFDEFL 60

Query: 61  SLYESISEMNRGGEEIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDDKRCVRDCR 120
           SLYESISE+NRGGEEIESDLLNAFQVFDEN DGFISCDELHNVLVRLGLWDDKRCVRDCR
Sbjct: 61  SLYESISEINRGGEEIESDLLNAFQVFDENRDGFISCDELHNVLVRLGLWDDKRCVRDCR 120

Query: 121 RMIGAFDVDLDGRLDFEEFKNMMNYSSNSSS 151
           RMIGAFDVDLDGRLDFEEFKNMMNYSS+SSS
Sbjct: 121 RMIGAFDVDLDGRLDFEEFKNMMNYSSHSSS 151

[Close]

BLAST of Csor.00g036370 vs. ExPASy TrEMBL
Match: A0A6J1FD73 (probable calcium-binding protein CML44 OS=Cucurbita moschata OX=3662 GN=LOC111443045 PE=4 SV=1)

HSP 1 Score: 298 bits (762), Expect = 5.54e-102
Identity = 146/150 (97.33%), Postives = 148/150 (98.67%), Query Frame = 0


Query: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL 60
           MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL
Sbjct: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL 60

Query: 61  SLYESISEMNRGGEEIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDDKRCVRDCR 120
           SLYESISE+NRGGEEIESDLLNAFQVFDEN DGFISCDELHNVLVRL LWDD+RCVRDCR
Sbjct: 61  SLYESISEINRGGEEIESDLLNAFQVFDENRDGFISCDELHNVLVRLELWDDRRCVRDCR 120

Query: 121 RMIGAFDVDLDGRLDFEEFKNMMNYSSNSS 150
           RMIGAFDVDLDGRLDFEEFKNMMNYSSNSS
Sbjct: 121 RMIGAFDVDLDGRLDFEEFKNMMNYSSNSS 150

[Close]

BLAST of Csor.00g036370 vs. ExPASy TrEMBL
Match: A0A6J1CD20 (probable calcium-binding protein CML44 OS=Momordica charantia OX=3673 GN=LOC111010552 PE=4 SV=1)

HSP 1 Score: 209 bits (533), Expect = 5.77e-67
Identity = 108/151 (71.52%), Postives = 123/151 (81.46%), Query Frame = 0


Query: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL 60
           MSP  ASDLQRIFET+D NGDGF+S+EEL+ LL+  G   I DDLESLIGK  +DF+EFL
Sbjct: 7   MSPLTASDLQRIFETLDSNGDGFLSVEELNRLLDSIGDGQICDDLESLIGKCKLDFEEFL 66

Query: 61  SLYESISEMNRGG--EEIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDDKRCVRD 120
           SLY+SISE NR G  EEIESDLLNAFQVFD+N DGFI C+EL NVL RLGLWD+ RC RD
Sbjct: 67  SLYKSISERNRAGAEEEIESDLLNAFQVFDQNRDGFICCEELRNVLARLGLWDE-RCGRD 126

Query: 121 CRRMIGAFDVDLDGRLDFEEFKNMMNYSSNS 149
           C  MIGAFD + DGRLDF+EFKN+M  +SNS
Sbjct: 127 CSSMIGAFDTNFDGRLDFQEFKNIMLSASNS 156

[Close]

BLAST of Csor.00g036370 vs. ExPASy TrEMBL
Match: A0A2N9GA67 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24170 PE=4 SV=1)

HSP 1 Score: 176 bits (446), Expect = 9.30e-54
Identity = 91/153 (59.48%), Postives = 112/153 (73.20%), Query Frame = 0


Query: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFIS-DDLESLIGKSMIDFDEF 60
           MSP N +DL RIFE +D+NGDG VS+EEL+WLL + GV  IS ++LES++GKS +D +EF
Sbjct: 1   MSPINTNDLHRIFEKLDKNGDGLVSLEELNWLLEKIGVQIISQEELESIVGKSSLDLNEF 60

Query: 61  LSLYESISEMNRG---------GEEIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLW 120
           LS ++SIS+ N            E  ESDL+ AF+VFD N DGFISCDEL NVL RLGLW
Sbjct: 61  LSFHDSISKQNSSCSNEVVEEEEENEESDLVKAFKVFDLNGDGFISCDELQNVLSRLGLW 120

Query: 121 DDKRCVRDCRRMIGAFDVDLDGRLDFEEFKNMM 143
           D+    RDCR MI  +D +LDG+LDFEEFKNMM
Sbjct: 121 DENSG-RDCRSMIHVYDTNLDGQLDFEEFKNMM 152

[Close]

BLAST of Csor.00g036370 vs. ExPASy TrEMBL
Match: A0A6P5ZL18 (probable calcium-binding protein CML44 OS=Durio zibethinus OX=66656 GN=LOC111301784 PE=4 SV=1)

HSP 1 Score: 173 bits (439), Expect = 3.65e-52
Identity = 93/169 (55.03%), Postives = 113/169 (66.86%), Query Frame = 0


Query: 1   MSPFNASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLIGKSMIDFDEFL 60
           MSP + +DLQRIFE +D+NGDGFVS+EEL+WLL R GV F  ++LESL+GK  +DFDEFL
Sbjct: 28  MSPLSKNDLQRIFEKLDKNGDGFVSLEELNWLLERIGVQFSLEELESLVGKPFLDFDEFL 87

Query: 61  SLYESISEMN-----------------------RGGEEIESDLLNAFQVFDENHDGFISC 120
             Y SIS  N                        GGEE +SDL  AF+VFD N DGFISC
Sbjct: 88  FFYYSISNQNADGGKKKIEPVAGSEEELELIDSHGGEE-DSDLAKAFKVFDLNGDGFISC 147

Query: 121 DELHNVLVRLGLWDDKRCVRDCRRMIGAFDVDLDGRLDFEEFKNMMNYS 146
           +EL NVL RLGLWD+    +DCR MI  +D ++DG +DFEEFKNMM +S
Sbjct: 148 EELQNVLGRLGLWDESSG-KDCRSMICFYDTNMDGMVDFEEFKNMMLHS 194

[Close]

BLAST of Csor.00g036370 vs. TAIR 10
Match: AT1G21550.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 115.9 bits (289), Expect = 2.8e-26
Identity = 61/145 (42.07%), Postives = 94/145 (64.83%), Query Frame = 0


Query: 7   SDLQRIFETIDRNGDGFVSIEELHWLLNRTG-VDFISDDLESLIGKSMIDFDEFLSLYES 66
           +DL+R+F+T+D+N DG V+++EL W+L++ G  +   D+LE ++GK  +D DEFL  Y  
Sbjct: 9   NDLRRMFKTLDKNQDGLVTLDELLWILDKLGWAEHTPDELELIVGKQSLDLDEFLRFYYD 68

Query: 67  ISEMNRGGE-------EIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDDKRCVRD 126
               ++G +       + +  +  AF VFD N DG+IS +EL +VL RLG ++++    D
Sbjct: 69  AVLDSKGSKKNIDVVADNDEAIARAFNVFDVNGDGYISAEELRDVLERLG-FEEEAKAWD 128

Query: 127 CRRMIGAFDVDLDGRLDFEEFKNMM 144
           C RMI   D +LDG +DFEEFKNM+
Sbjct: 129 CGRMIRVHDKNLDGFVDFEEFKNMI 152

[Close]

BLAST of Csor.00g036370 vs. TAIR 10
Match: AT4G20780.1 (calmodulin like 42 )

HSP 1 Score: 112.8 bits (281), Expect = 2.3e-25
Identity = 69/159 (43.40%), Postives = 94/159 (59.12%), Query Frame = 0


Query: 5   NASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLI------GKSMIDFDE 64
           NA  LQRIF+  D+NGDGF+++EEL   L R G++    DL+S +      G + ++FD+
Sbjct: 26  NALRLQRIFDLFDKNGDGFITVEELSQALTRLGLNADLSDLKSTVESYIQPGNTGLNFDD 85

Query: 65  FLSLYESISEMNRGG--------------EEIESDLLNAFQVFDENHDGFISCDELHNVL 124
           F SL++++ +   GG               E ESDL  AF+VFDEN DGFIS  EL  VL
Sbjct: 86  FSSLHKTLDDSFFGGACGGGENEDDPSSAAENESDLAEAFKVFDENGDGFISARELQTVL 145

Query: 125 VRLGLWDDKRCVRDCRRMIGAFDVDLDGRLDFEEFKNMM 144
            +LGL +     R   +MI + D + DGR+DF EFKNMM
Sbjct: 146 KKLGLPEGGEMER-VEKMIVSVDRNQDGRVDFFEFKNMM 183

[Close]

BLAST of Csor.00g036370 vs. TAIR 10
Match: AT5G44460.1 (calmodulin like 43 )

HSP 1 Score: 108.6 bits (270), Expect = 4.4e-24
Identity = 65/151 (43.05%), Postives = 91/151 (60.26%), Query Frame = 0


Query: 5   NASDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLI------GKSMIDFDE 64
           NA  L R+F+  D+N DGF+++EEL   L+R G+D    DL+S +       K+ + FD+
Sbjct: 25  NALRLHRVFDLFDKNNDGFITVEELSQALSRLGLDADFSDLKSTVDSFIKPDKTGLRFDD 84

Query: 65  FLSLYESISEMNRGGE------EIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDD 124
           F +L++++ E   GGE        ESDL  AF VFDE+ DGFIS  EL  VL +LGL  +
Sbjct: 85  FAALHKTLDESFFGGEGSCCDGSPESDLEEAFNVFDEDGDGFISAVELQKVLKKLGL-PE 144

Query: 125 KRCVRDCRRMIGAFDVDLDGRLDFEEFKNMM 144
              +    +MI + D + DGR+DF EFKNMM
Sbjct: 145 AGEIEQVEKMIVSVDSNHDGRVDFFEFKNMM 174

[Close]

BLAST of Csor.00g036370 vs. TAIR 10
Match: AT3G07490.1 (ARF-GAP domain 11 )

HSP 1 Score: 107.5 bits (267), Expect = 9.8e-24
Identity = 61/143 (42.66%), Postives = 85/143 (59.44%), Query Frame = 0


Query: 7   SDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLI------GKSMIDFDEFL 66
           ++L RIF+  DRNGDG ++ +EL+  L   G+     DL  +I      G   +D +EF 
Sbjct: 4   AELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYVDIEEFG 63

Query: 67  SLYESISEMNRGGEEIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDDKRCVRDCR 126
            LY++I E      + E D+  AF VFD+N DGFI+ +EL +VL  LGL    R + DC+
Sbjct: 64  GLYQTIME----ERDEEEDMREAFNVFDQNRDGFITVEELRSVLASLGL-KQGRTLEDCK 123

Query: 127 RMIGAFDVDLDGRLDFEEFKNMM 144
           RMI   DVD DG ++F+EFK MM
Sbjct: 124 RMISKVDVDGDGMVNFKEFKQMM 141

[Close]

BLAST of Csor.00g036370 vs. TAIR 10
Match: AT2G43290.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 106.3 bits (264), Expect = 2.2e-23
Identity = 63/152 (41.45%), Postives = 90/152 (59.21%), Query Frame = 0


Query: 7   SDLQRIFETIDRNGDGFVSIEELHWLLNRTGVDFISDDLESLI------GKSMIDFDEFL 66
           S+L+R+F+  D+NGDG ++ EEL+  L   G+     DL  +I      G   +D DEF 
Sbjct: 64  SELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDIDEFE 123

Query: 67  SLYESI-SEMNRGGEEIESDLLNAFQVFDENHDGFISCDELHNVLVRLGLWDDKRCVRDC 126
           SLY SI  E +  GE  E D+ +AF VFD++ DGFI+ +EL +V+  LGL   K  +  C
Sbjct: 124 SLYSSIVDEHHNDGETEEEDMKDAFNVFDQDGDGFITVEELKSVMASLGLKQGK-TLDGC 183

Query: 127 RRMIGAFDVDLDGRLDFEEFKNMMNYSSNSSS 152
           ++MI   D D DGR++++EF  MM     SSS
Sbjct: 184 KKMIMQVDADGDGRVNYKEFLQMMKGGGFSSS 214

The following BLAST results are available for this feature:

BLAST of Csor.00g036370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LPK5	3.9e-25	42.07	Probable calcium-binding protein CML44 OS=Arabidopsis thaliana OX=3702 GN=CML44 ...	[more]
Q9SVG9	3.3e-24	43.40	Calcium-binding protein CML42 OS=Arabidopsis thaliana OX=3702 GN=CML42 PE=1 SV=1	[more]
Q0JC44	4.8e-23	44.16	Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q0DZP5	6.2e-23	42.67	Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q9FI19	6.2e-23	43.05	Probable calcium-binding protein CML43 OS=Arabidopsis thaliana OX=3702 GN=CML43 ...	[more]

BLAST of Csor.00g036370 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6592136.1	1.24e-105	100.00	Calcium-binding protein CML42, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7025009.1	5.90e-104	98.68	Calcium-binding protein CML42, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_023536413.1	6.90e-103	98.00	probable calcium-binding protein CML44 [Cucurbita pepo subsp. pepo]	[more]
XP_022976028.1	3.99e-102	97.35	probable calcium-binding protein CML44 [Cucurbita maxima]	[more]
XP_022936418.1	1.14e-101	97.33	probable calcium-binding protein CML44 [Cucurbita moschata]	[more]

BLAST of Csor.00g036370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IKW9	1.93e-102	97.35	probable calcium-binding protein CML44 OS=Cucurbita maxima OX=3661 GN=LOC1114765...	[more]
A0A6J1FD73	5.54e-102	97.33	probable calcium-binding protein CML44 OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1CD20	5.77e-67	71.52	probable calcium-binding protein CML44 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A2N9GA67	9.30e-54	59.48	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24170 PE=4 SV=1	[more]
A0A6P5ZL18	3.65e-52	55.03	probable calcium-binding protein CML44 OS=Durio zibethinus OX=66656 GN=LOC111301...	[more]

BLAST of Csor.00g036370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G21550.1	2.8e-26	42.07	Calcium-binding EF-hand family protein	[more]
AT4G20780.1	2.3e-25	43.40	calmodulin like 42	[more]
AT5G44460.1	4.4e-24	43.05	calmodulin like 43	[more]
AT3G07490.1	9.8e-24	42.66	ARF-GAP domain 11	[more]
AT2G43290.1	2.2e-23	41.45	Calcium-binding EF-hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 79..107 e-value: 0.0045 score: 26.2 coord: 118..146 e-value: 0.28 score: 20.2 coord: 8..36 e-value: 7.1E-5 score: 32.2
IPR002048	EF-hand domain	PFAM	PF00036	EF-hand_1	coord: 8..34 e-value: 2.6E-6 score: 26.6
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 78..143 e-value: 4.5E-10 score: 39.8
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 114..149 score: 11.528597
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 4..39 score: 13.620752
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 75..110 score: 14.178661
None	No IPR available	GENE3D	1.10.238.10		coord: 74..151 e-value: 5.8E-18 score: 66.7
None	No IPR available	GENE3D	1.10.238.10		coord: 5..68 e-value: 2.2E-10 score: 42.5
None	No IPR available	PANTHER	PTHR10891:SF788	CALCIUM-BINDING PROTEIN CML44-RELATED	coord: 1..147
None	No IPR available	PANTHER	PTHR10891	EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN	coord: 1..147
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 88..100
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 17..29
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 1..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g036370.m01	Csor.00g036370.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding