Csor.00g035110 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g035110
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr14: 12454696 .. 12456816 (+)
RNA-Seq ExpressionCsor.00g035110
SyntenyCsor.00g035110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCAGATTTTTGGCGAGATTTCCAATCGGATTTCGCTTGCACGGAAGAAATTGATTATGATAAGGAAGGTTTGGTGGTTATCCTTTACCGGAAATCCGCGAAGAAGAAGAAGAAGAAGAAAAAAAAAAAAAAAAATTGTTAGTTCCCTGTTTTTTTTTTTCTTCTCCCCTTCTTTCTTCACCGGAAAAGTTGAATTAACGGCAACAATGACCGATCAGTCTATCTATATCCTCGTGCAAATTTGGAATCTGCCAATAAATCAATTTTTTTTTATAAAAAAGATGGAGAAATTGAAAATTGTGCTTTTTAAAAAGCCACCGGCTGCGTGTTTGATAATCTCACCTTCACTGTTGCAGTAAAATATAAAGTGAAATGACCAATTCTTTATTGTTTGTCAGTCACCGTCAAATAAAAAATTTACTTTTATATTAAGTGAATCAAATAAGTACAAATTTTATAATCAGAAATTAAATTTAGCCATAAAATTGTATTTAAAATATATAAAACCGGAATTTTTGTATTGGGATTATTGGTTGGGTTATTTCTTCAACGGTCGGGTCCAACAGAAAACCAGCACGTGGAGGATACGGGTCGGTATCGTTACCCGGTTTTGTGGGCCCCGCTTTATTGAACAAAACAGACCACGTCACTGTTCCGTTCAATTGCTTGACGTTTGCTTACATAAATCCATCAAAATTTTCACTTTCCCCCAAAAAAAGAAACTAATTTCCTTAAATTCGCGTGGTCCCCACATGCTTTTTTTAATTCTCTTTTTAATATTTCTCAGCAATATCCTATGGAAGCGATAACTTTTAATATATATATATTTTTTTTTTTGTAAATATTAAATTCCCAATTCCAATGCATTATTACGACAGATTTATTTATTTATTTATTTTCAGATTTTAATTTAATTATTGCTTGACATTTGTTTTCTATGCAGGTTCAAATACCTCAATTTTATTTATGTACTTCTTATAAAATTTAAAAATATATTTACCGAATATTTTTTCAGGCTTAAAAATTATTATTATTATTATTATATTTTAATAAAAGGAAACTTTTAATCAACGAATTTTCGTATGGTTTCTAATTTTCTCTCAATTGGAAAAAAAAAAGAAAAAAACTTTAAAATACAAAAGAAAGAAAAAGAGTGTTATTGTACCTTTTTGGATCTGGGCAGAAGGGAATCGTGATCGTCCAAGGAATCCAAAAGTATATGCGTTTTAAATTACTACCGTTGGATTCTGGTTCCGATTTGTCGTTATCGCGACGGATTTGGCCCGTGGTTCGTCGGCGAAGGGCAATGGCACCGACGTGGTTATTTCCTTGCTTCTCCTCCGCCGTTGCTCTCTACAGCGAACGCGACGTGAGAATCGAGATCTTAATGGCGTTACCAAGCTCTGTGATGTCTAGATCTTAATGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGCCGTCGTTCAAATCGTCAGATTCAGGCTTTCGTTTCGGCACAACACCATTTAGCGCTCCGATTTCTCGTTTGGAGAGGTTAATTGTTCGAAATCGCTCATTGAAGAGGTAATAATGACTCGCCATTATCTTCTTGATTTTCGATTGTAAGACTAATTTTGTTTGCTATCTGTATCTGTTATATTTGTGATGAAATTAGAAGAAACACTGTAATTTCTCAGTTGAATCATCGTCAAGACTTGTGTTACCTTACATTGATTTTTCATGTTTGTTTGGGGATGTTGATTCAATTACCAGAAATTTGGGAGTGATTATGAAGTAAACTACATTTAGTTTAATTTCTCCTCGGAGTTATTGTCTGTTTGCTTGGCCAGATCTCAATATTTTCTCTAAAGAAAGTGATTATTGGTTTTGATTCCTTGATGCAAGTTAAATGGTGATCTGATCAATTTTATTTTGTTCTTTGGCTTATCATTTATCAGCTATGTTCTTGTAAAGAATGAGATATTTTAGCAGATTGCTTCTGTATGATCCAAATTTCGAACATGGATGAATCTCTGTTGTAACTATCATTGTTGCCTGCTTGATAAGCCTCTATGTAACTCTGGAAACCAAATCTCATTGAAACTGCAGGAATGGTAAAGGACGATGA

mRNA sequence

ATGGGTCAGATTTTTGGCGAGATTTCCAATCGGATTTCGCTTGCACGGAAGAAATTGATTATGATAAGGAAGGGCAATGGCACCGACGTGGTTATTTCCTTGCTTCTCCTCCGCCGTTGCTCTCTACAGCGAACGCGACATTCAGGCTTTCGTTTCGGCACAACACCATTTAGCGCTCCGATTTCTCGTTTGGAGAGGTTAATTGTTCGAAATCGCTCATTGAAGAGGAATGGTAAAGGACGATGA

Coding sequence (CDS)

ATGGGTCAGATTTTTGGCGAGATTTCCAATCGGATTTCGCTTGCACGGAAGAAATTGATTATGATAAGGAAGGGCAATGGCACCGACGTGGTTATTTCCTTGCTTCTCCTCCGCCGTTGCTCTCTACAGCGAACGCGACATTCAGGCTTTCGTTTCGGCACAACACCATTTAGCGCTCCGATTTCTCGTTTGGAGAGGTTAATTGTTCGAAATCGCTCATTGAAGAGGAATGGTAAAGGACGATGA

Protein sequence

MGQIFGEISNRISLARKKLIMIRKGNGTDVVISLLLLRRCSLQRTRHSGFRFGTTPFSAPISRLERLIVRNRSLKRNGKGR
Homology
[Close]
BLAST of Csor.00g035110 vs. NCBI nr
Match: KAG6581897.1 (hypothetical protein SDJN03_21899, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 159 bits (401), Expect = 7.74e-49
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0 

Query: 1  MGQIFGEISNRISLARKKLIMIRKGNGTDVVISLLLLRRCSLQRTRHSGFRFGTTPFSAP 60
          MGQIFGEISNRISLARKKLIMIRKGNGTDVVISLLLLRRCSLQRTRHSGFRFGTTPFSAP
Sbjct: 1  MGQIFGEISNRISLARKKLIMIRKGNGTDVVISLLLLRRCSLQRTRHSGFRFGTTPFSAP 60

Query: 61 ISRLERLIVRNRSLKRNGKGR 81
          ISRLERLIVRNRSLKRNGKGR
Sbjct: 61 ISRLERLIVRNRSLKRNGKGR 81

The following BLAST results are available for this feature:
BLAST of Csor.00g035110 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g035110 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6581897.17.74e-49100.00hypothetical protein SDJN03_21899, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g035110 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g035110 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g035110.m01Csor.00g035110.m01mRNA