Csor.00g034020 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g034020
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	AP2-like ethylene-responsive transcription factor
Location	Csor_Chr07: 4691627 .. 4693042 (+)
RNA-Seq Expression	Csor.00g034020
Synteny	Csor.00g034020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTTTACAGTTCTAAATTCAGAGTTCTGTTCTTTCAAAACTGATTCCGGGGCCGTCAAGTGCATAAGGAGACGGCGGAGAAGCTGCAAGGGAAGCCGTCAACCACCCAAGTCAGCGGCAGATCAATCCACTACCACAAAAAGAAGCTCCAGGTTTCGTGGAGTTAGCAGGTATTGAGAATATATTCACAACTACTAAAAATAAAATATACCATACAAATCAGGTGTTGGGTTTCATAAGTCAGTTTATATCCGAGCTTGAGTAGAATGTTGAATTTAGAGCGTACACGAGTTGGGTTGGATTAGACAGGAAAAATCTTTTGGACCAACTCGAAAATTTTGGCTGGTTGAGTTGGTGACACGAGCAATTCGAATAGAGTTCAACCTTCTATTTTCGCATTAGATTGAGTTGAGTTGTCATGTTGTTCCTTTTCTTTTATTATTTTCTAGTTAGATTGAGTTAAGTTGGGTTGTCGATTGTCATGTGGTTCTTTTTCTTAAAAAAAAAAAACCATATTTATGGACAACACGTGTGATTATTACATTAATAATAGCTCATAAAGTTCAAATATCAAACATTTACAAGTCAAACACATCATTAGCATATGTTAAAAACGTTAAATACTCTTTATTTTTTAGAAGTAAAGTACGATAGGATAGGGTTGGGTAGGGTTGAATTGTAACTCTATTTTCGGATTAGTCGGGTTGACCTGACCATCAACCCAACCAAAAACATGTCGAACCCTCCAACCAAACTGAATTCTTCGATTTCCCAAAAAAATCAACCCTGGGTTGGGTTGGATAGTCGGAGATGGTTGAGTTATGTGATCATATGAACATTCCTAATTGAGACCATAAGTAAATTAAAAACGAGCAGACATCGATGGACGGGACGTTTTGAAGCTCACTTATGGGACAAAGGGTCATGGAATCCAACACAAAGGAAGAAGGGAAAGCAAGGTAAATTGAGGTTAACTTCATAAATTTGGTGTTTATGGATGGCTAAGCTCATAACTTCTCATGTTTGTGTTGTGATGTGATGATGATCACCCATTTGAAACAAATGGAGCAGTTTATTTAGGTAAGTTTGTTAAAACGCAATTAAATTATATTTAAATATGATTATAAGTATGTAAATAAAAACATGTTATAAACGTGTTTAAATGAAAAATAGGAGCTTATGATGAAGAAGAATCAGCTGCTAGAGCATATGACTTAGCTGCACTCAAATATTGGGGAACCTCCACTTTCACTAATTTTTCGGTACCATTAAATTCTATTTAATTTTCTATTTAAATTATTTAATTTTCTGATTTGTAAGATTGATTATTTTGTGCAGGCATCTGATTATGAGAATGAGATTAAGATAATGAAGAATGTGACAAAAGGAGGAATACGTTGCGCCTCTTGTTAA

mRNA sequence

ATGGACTTTACAGTTCTAAATTCAGAGTTCTGTTCTTTCAAAACTGATTCCGGGGCCGTCAAGTGCATAAGGAGACGGCGGAGAAGCTGCAAGGGAAGCCGTCAACCACCCAAGTCAGCGGCAGATCAATCCACTACCACAAAAAGAAGCTCCAGGTTTCGTGGAGTTAGCAGACATCGATGGACGGGACGTTTTGAAGCTCACTTATGGGACAAAGGGTCATGGAATCCAACACAAAGGAAGAAGGGAAAGCAAGGAGCTTATGATGAAGAAGAATCAGCTGCTAGAGCATATGACTTAGCTGCACTCAAATATTGGGGAACCTCCACTTTCACTAATTTTTCGGCATCTGATTATGAGAATGAGATTAAGATAATGAAGAATGTGACAAAAGGAGGAATACGTTGCGCCTCTTGTTAA

Coding sequence (CDS)

ATGGACTTTACAGTTCTAAATTCAGAGTTCTGTTCTTTCAAAACTGATTCCGGGGCCGTCAAGTGCATAAGGAGACGGCGGAGAAGCTGCAAGGGAAGCCGTCAACCACCCAAGTCAGCGGCAGATCAATCCACTACCACAAAAAGAAGCTCCAGGTTTCGTGGAGTTAGCAGACATCGATGGACGGGACGTTTTGAAGCTCACTTATGGGACAAAGGGTCATGGAATCCAACACAAAGGAAGAAGGGAAAGCAAGGAGCTTATGATGAAGAAGAATCAGCTGCTAGAGCATATGACTTAGCTGCACTCAAATATTGGGGAACCTCCACTTTCACTAATTTTTCGGCATCTGATTATGAGAATGAGATTAAGATAATGAAGAATGTGACAAAAGGAGGAATACGTTGCGCCTCTTGTTAA

Protein sequence

MDFTVLNSEFCSFKTDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSASDYENEIKIMKNVTKGGIRCASC

Homology

[Close]

BLAST of Csor.00g034020 vs. ExPASy Swiss-Prot
Match: A0JPZ8 (AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thaliana OX=3702 GN=At1g79700 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.7e-27
Identity = 64/120 (53.33%), Postives = 83/120 (69.17%), Query Frame = 0


Query: 15  TDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHRWTGRFEAHLWDKGS 74
           ++S ++    +R+R     + PP++A  Q     RSS +RGV+RHRWTGR+EAHLWDK S
Sbjct: 25  SESASIALTSKRKR-----KSPPRNAPLQ-----RSSPYRGVTRHRWTGRYEAHLWDKNS 84

Query: 75  WNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSASDYENEIKIMKNVTK 132
           WN TQ KKG+Q   GAYDEEE+AARAYDLAALKYWG  T  NF    Y+ ++K M+  +K
Sbjct: 85  WNDTQTKKGRQVYLGAYDEEEAAARAYDLAALKYWGRDTLLNFPLPSYDEDVKEMEGQSK 134

[Close]

BLAST of Csor.00g034020 vs. ExPASy Swiss-Prot
Match: X5HYT8 (AP2-like ethylene-responsive transcription factor SMOS1 OS=Oryza sativa subsp. japonica OX=39947 GN=SMOS1 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.9e-27
Identity = 65/114 (57.02%), Postives = 79/114 (69.30%), Query Frame = 0


Query: 25  RRRRSCKG----SRQPPKSAADQSTTTKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQR 84
           R+ R C      SR PP +A       KRSS +RGV+RHRWTGR+EAHLWDK +WN  Q 
Sbjct: 64  RKERVCTAKERISRMPPCAAG------KRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQN 123

Query: 85  KKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSASDYENEIKIMKNVTK 132
           KKGKQ   GAYD+EE+AARAYDLAALKYWG  T  NF  SDY  +++ M+ ++K
Sbjct: 124 KKGKQVYLGAYDDEEAAARAYDLAALKYWGAGTQINFPVSDYARDLEEMQMISK 171

[Close]

BLAST of Csor.00g034020 vs. ExPASy Swiss-Prot
Match: Q6X5Y6 (Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana OX=3702 GN=WRI1 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 3.8e-27
Identity = 66/112 (58.93%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 24  RRRRRSCKGSRQPPKSAADQS-TTTKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKK 83
           +R +R+ K S    KS    S  +T+RSS +RGV+RHRWTGRFEAHLWDK SWN  Q KK
Sbjct: 36  KRAKRAKKSSPSGDKSHNPTSPASTRRSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKK 95

Query: 84  GKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSASDYENEIKIMKNVTK 132
           GKQ   GAYD EE+AA  YDLAALKYWG  T  NF A  Y  E++ M+ VTK
Sbjct: 96  GKQVYLGAYDSEEAAAHTYDLAALKYWGPDTILNFPAETYTKELEEMQRVTK 147

[Close]

BLAST of Csor.00g034020 vs. ExPASy Swiss-Prot
Match: Q8GWK2 (AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thaliana OX=3702 GN=At2g41710 PE=1 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 5.0e-27
Identity = 62/114 (54.39%), Postives = 79/114 (69.30%), Query Frame = 0


Query: 25  RRRRSCKG----SRQPPKSAADQSTTTKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQR 84
           ++ R C      S+ PP       T  KRSS +RGV+RHRWTGR+EAHLWDK +WN  Q 
Sbjct: 45  KKERGCTAKERISKMPP------CTAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQN 104

Query: 85  KKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSASDYENEIKIMKNVTK 132
           KKGKQ   GAYD+EE+AARAYDLAALKYWG  T  NF  +DY  +++ M+N+++
Sbjct: 105 KKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNLSR 152

[Close]

BLAST of Csor.00g034020 vs. ExPASy Swiss-Prot
Match: Q94AN4 (AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thaliana OX=3702 GN=At1g16060 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.5e-26
Identity = 65/119 (54.62%), Postives = 79/119 (66.39%), Query Frame = 0


Query: 16  DSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHRWTGRFEAHLWDKGSW 75
           D  A   + + +R     R  P+ A  Q     RSS  RGV+RHRWTGR+EAHLWDK SW
Sbjct: 30  DQSATSVVLKAKRK---RRSQPRDAPPQ-----RSSVHRGVTRHRWTGRYEAHLWDKNSW 89

Query: 76  NPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSASDYENEIKIMKNVTK 132
           N TQ KKG+Q   GAYDEE++AARAYDLAALKYWG  T  NF   +YE +IK M++ +K
Sbjct: 90  NETQTKKGRQVYLGAYDEEDAAARAYDLAALKYWGRDTILNFPLCNYEEDIKEMESQSK 140

[Close]

BLAST of Csor.00g034020 vs. NCBI nr
Match: KAG6595274.1 (Ethylene-responsive transcription factor WRI1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 287 bits (735), Expect = 6.09e-98
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MDFTVLNSEFCSFKTDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHR 60
           MDFTVLNSEFCSFKTDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHR
Sbjct: 1   MDFTVLNSEFCSFKTDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHR 60

Query: 61  WTGRFEAHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSASDYE 120
           WTGRFEAHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSASDYE
Sbjct: 61  WTGRFEAHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSASDYE 120

Query: 121 NEIKIMKNVTKGGIRCASC 139
           NEIKIMKNVTKGGIRCASC
Sbjct: 121 NEIKIMKNVTKGGIRCASC 139

[Close]

BLAST of Csor.00g034020 vs. NCBI nr
Match: KAG6599026.1 (Ethylene-responsive transcription factor WRI1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268 bits (684), Expect = 9.69e-88
Identity = 130/131 (99.24%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MDFTVLNSEFCSFKTDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHR 60
           MDFTVLNSEFCSFKTDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHR
Sbjct: 1   MDFTVLNSEFCSFKTDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHR 60

Query: 61  WTGRFEAHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSASDYE 120
           WTGRFEAHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFS SDYE
Sbjct: 61  WTGRFEAHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTSTFTNFSVSDYE 120

Query: 121 NEIKIMKNVTK 131
           NEIKIMKNVTK
Sbjct: 121 NEIKIMKNVTK 131

[Close]

BLAST of Csor.00g034020 vs. NCBI nr
Match: XP_022946897.1 (ethylene-responsive transcription factor WRI1-like [Cucurbita moschata])

HSP 1 Score: 264 bits (674), Expect = 6.81e-86
Identity = 131/134 (97.76%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MDFTVLNSEFCSFKTDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHR 60
           MDFTVLNSEFCSFKTDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHR
Sbjct: 1   MDFTVLNSEFCSFKTDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHR 60

Query: 61  WTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSAS 120
           WTGRFEAHLWDKGSWNPTQRKKGKQ   GAYDEEESAARAYDLAALKYWGTSTFTNFSAS
Sbjct: 61  WTGRFEAHLWDKGSWNPTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFSAS 120

Query: 121 DYENEIKIMKNVTK 131
           DYENEIKIMKNVTK
Sbjct: 121 DYENEIKIMKNVTK 134

[Close]

BLAST of Csor.00g034020 vs. NCBI nr
Match: XP_022998979.1 (ethylene-responsive transcription factor WRI1-like [Cucurbita maxima])

HSP 1 Score: 251 bits (640), Expect = 9.71e-81
Identity = 125/134 (93.28%), Postives = 126/134 (94.03%), Query Frame = 0


Query: 1   MDFTVLNSEFCSFKTDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHR 60
           MDFTVLNSEFCSFKTDS AV CIRRRRRSCKGSRQPPKSAADQST TKRSSRFRGVSRHR
Sbjct: 1   MDFTVLNSEFCSFKTDSVAVNCIRRRRRSCKGSRQPPKSAADQSTATKRSSRFRGVSRHR 60

Query: 61  WTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSAS 120
           WTGRFEAHLWDKGSWNPTQRKKGKQ   GAYDEEESAARAYDLAALKYWGTSTFTNFS S
Sbjct: 61  WTGRFEAHLWDKGSWNPTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFSVS 120

Query: 121 DYENEIKIMKNVTK 131
           DYE EIKIMK+VTK
Sbjct: 121 DYEKEIKIMKSVTK 134

[Close]

BLAST of Csor.00g034020 vs. NCBI nr
Match: XP_023546415.1 (ethylene-responsive transcription factor WRI1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251 bits (640), Expect = 9.71e-81
Identity = 125/134 (93.28%), Postives = 125/134 (93.28%), Query Frame = 0


Query: 1   MDFTVLNSEFCSFKTDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHR 60
           MDFTVLNSEFCSFKTDS AV CIRRRRRSCKGSRQPPKS ADQST TKRSSRFRGVSRHR
Sbjct: 1   MDFTVLNSEFCSFKTDSVAVNCIRRRRRSCKGSRQPPKSPADQSTATKRSSRFRGVSRHR 60

Query: 61  WTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSAS 120
           WTGRFEAHLWDKGSWNPTQRKKGKQ   GAYDEEESAARAYDLAALKYWGTSTFTNFS S
Sbjct: 61  WTGRFEAHLWDKGSWNPTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFSVS 120

Query: 121 DYENEIKIMKNVTK 131
           DYENEIKIMK VTK
Sbjct: 121 DYENEIKIMKRVTK 134

[Close]

BLAST of Csor.00g034020 vs. ExPASy TrEMBL
Match: A0A6J1G4W8 (ethylene-responsive transcription factor WRI1-like OS=Cucurbita moschata OX=3662 GN=LOC111450835 PE=4 SV=1)

HSP 1 Score: 264 bits (674), Expect = 3.30e-86
Identity = 131/134 (97.76%), Postives = 131/134 (97.76%), Query Frame = 0


Query: 1   MDFTVLNSEFCSFKTDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHR 60
           MDFTVLNSEFCSFKTDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHR
Sbjct: 1   MDFTVLNSEFCSFKTDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHR 60

Query: 61  WTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSAS 120
           WTGRFEAHLWDKGSWNPTQRKKGKQ   GAYDEEESAARAYDLAALKYWGTSTFTNFSAS
Sbjct: 61  WTGRFEAHLWDKGSWNPTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFSAS 120

Query: 121 DYENEIKIMKNVTK 131
           DYENEIKIMKNVTK
Sbjct: 121 DYENEIKIMKNVTK 134

[Close]

BLAST of Csor.00g034020 vs. ExPASy TrEMBL
Match: A0A6J1KFT6 (ethylene-responsive transcription factor WRI1-like OS=Cucurbita maxima OX=3661 GN=LOC111493509 PE=4 SV=1)

HSP 1 Score: 251 bits (640), Expect = 4.70e-81
Identity = 125/134 (93.28%), Postives = 126/134 (94.03%), Query Frame = 0


Query: 1   MDFTVLNSEFCSFKTDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHR 60
           MDFTVLNSEFCSFKTDS AV CIRRRRRSCKGSRQPPKSAADQST TKRSSRFRGVSRHR
Sbjct: 1   MDFTVLNSEFCSFKTDSVAVNCIRRRRRSCKGSRQPPKSAADQSTATKRSSRFRGVSRHR 60

Query: 61  WTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSAS 120
           WTGRFEAHLWDKGSWNPTQRKKGKQ   GAYDEEESAARAYDLAALKYWGTSTFTNFS S
Sbjct: 61  WTGRFEAHLWDKGSWNPTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGTSTFTNFSVS 120

Query: 121 DYENEIKIMKNVTK 131
           DYE EIKIMK+VTK
Sbjct: 121 DYEKEIKIMKSVTK 134

[Close]

BLAST of Csor.00g034020 vs. ExPASy TrEMBL
Match: A0A6J1DD61 (ethylene-responsive transcription factor WRI1-like OS=Momordica charantia OX=3673 GN=LOC111019289 PE=4 SV=1)

HSP 1 Score: 204 bits (518), Expect = 1.09e-62
Identity = 105/145 (72.41%), Postives = 114/145 (78.62%), Query Frame = 0


Query: 1   MDFTVLNSEFCSFKTDSGAVKCIRRRRRSCK-----------GSRQPPKSAADQSTTTKR 60
           MDFTVLNS+FC  ++DS A+KC +RRRRS             G     KS  D+STTTKR
Sbjct: 1   MDFTVLNSDFCPIRSDSMALKCKKRRRRSTSSSTLLEGAATSGDGPRHKSQTDRSTTTKR 60

Query: 61  SSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALKYW 120
           SSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ   GAYDEEESAARAYDLAALKYW
Sbjct: 61  SSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQVYLGAYDEEESAARAYDLAALKYW 120

Query: 121 GTSTFTNFSASDYENEIKIMKNVTK 131
           GTSTFTNF  SDYE E++IMK +TK
Sbjct: 121 GTSTFTNFPTSDYEEEVRIMKTMTK 145

[Close]

BLAST of Csor.00g034020 vs. ExPASy TrEMBL
Match: A0A0A0KJ57 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G404260 PE=4 SV=1)

HSP 1 Score: 205 bits (521), Expect = 1.26e-62
Identity = 106/141 (75.18%), Postives = 114/141 (80.85%), Query Frame = 0


Query: 1   MDFTVLNSEFCSFKTDS-GAVKCIRRRRRSCK---------GSRQPPKSAADQSTTTKRS 60
           M+  V+NSE CS K+DS  AVK ++RRRR+           G  QP K   +QST TKRS
Sbjct: 1   MELGVVNSELCSLKSDSMAAVKGVKRRRRNASSSSPTVGGGGDGQPHKLMPNQSTATKRS 60

Query: 61  SRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTST 120
           S+FRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTST
Sbjct: 61  SKFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQGAYDEEESAARAYDLAALKYWGTST 120

Query: 121 FTNFSASDYENEIKIMKNVTK 131
           FTNFS SDYENEIKIMK VTK
Sbjct: 121 FTNFSISDYENEIKIMKTVTK 141

[Close]

BLAST of Csor.00g034020 vs. ExPASy TrEMBL
Match: A0A1S3C431 (AP2-like ethylene-responsive transcription factor At1g79700 OS=Cucumis melo OX=3656 GN=LOC103496639 PE=4 SV=1)

HSP 1 Score: 202 bits (514), Expect = 1.72e-61
Identity = 107/143 (74.83%), Postives = 114/143 (79.72%), Query Frame = 0


Query: 1   MDFTVLNSEFCSFKTDS-GAVKCIRRRRRSCK--------GSRQPPKSAADQSTTTKRSS 60
           M+  VLNSE CS K+DS  AVK ++RRRR+          G  QP KS  +QST TKRSS
Sbjct: 1   MELAVLNSELCSLKSDSMAAVKGVKRRRRNASSSSTVGDGGDGQPHKSMPNQSTATKRSS 60

Query: 61  RFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGT 120
           +FRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQ   GAYDEEESAARAYDLAALKYWGT
Sbjct: 61  KFRGVSRHRWTGRFEAHLWDKGSWNPTQRKKGKQVYLGAYDEEESAARAYDLAALKYWGT 120

Query: 121 STFTNFSASDYENEIKIMKNVTK 131
           STFTNF  SDYENEIKIMK VTK
Sbjct: 121 STFTNFPISDYENEIKIMKTVTK 143

[Close]

BLAST of Csor.00g034020 vs. TAIR 10
Match: AT1G79700.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-28
Identity = 64/120 (53.33%), Postives = 83/120 (69.17%), Query Frame = 0


Query: 15  TDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHRWTGRFEAHLWDKGS 74
           ++S ++    +R+R     + PP++A  Q     RSS +RGV+RHRWTGR+EAHLWDK S
Sbjct: 25  SESASIALTSKRKR-----KSPPRNAPLQ-----RSSPYRGVTRHRWTGRYEAHLWDKNS 84

Query: 75  WNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSASDYENEIKIMKNVTK 132
           WN TQ KKG+Q   GAYDEEE+AARAYDLAALKYWG  T  NF    Y+ ++K M+  +K
Sbjct: 85  WNDTQTKKGRQVYLGAYDEEEAAARAYDLAALKYWGRDTLLNFPLPSYDEDVKEMEGQSK 134

[Close]

BLAST of Csor.00g034020 vs. TAIR 10
Match: AT1G79700.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 123.6 bits (309), Expect = 1.2e-28
Identity = 64/120 (53.33%), Postives = 83/120 (69.17%), Query Frame = 0


Query: 15  TDSGAVKCIRRRRRSCKGSRQPPKSAADQSTTTKRSSRFRGVSRHRWTGRFEAHLWDKGS 74
           ++S ++    +R+R     + PP++A  Q     RSS +RGV+RHRWTGR+EAHLWDK S
Sbjct: 25  SESASIALTSKRKR-----KSPPRNAPLQ-----RSSPYRGVTRHRWTGRYEAHLWDKNS 84

Query: 75  WNPTQRKKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSASDYENEIKIMKNVTK 132
           WN TQ KKG+Q   GAYDEEE+AARAYDLAALKYWG  T  NF    Y+ ++K M+  +K
Sbjct: 85  WNDTQTKKGRQVYLGAYDEEEAAARAYDLAALKYWGRDTLLNFPLPSYDEDVKEMEGQSK 134

[Close]

BLAST of Csor.00g034020 vs. TAIR 10
Match: AT3G54320.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 2.7e-28
Identity = 66/112 (58.93%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 24  RRRRRSCKGSRQPPKSAADQS-TTTKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKK 83
           +R +R+ K S    KS    S  +T+RSS +RGV+RHRWTGRFEAHLWDK SWN  Q KK
Sbjct: 36  KRAKRAKKSSPSGDKSHNPTSPASTRRSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKK 95

Query: 84  GKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSASDYENEIKIMKNVTK 132
           GKQ   GAYD EE+AA  YDLAALKYWG  T  NF A  Y  E++ M+ VTK
Sbjct: 96  GKQVYLGAYDSEEAAAHTYDLAALKYWGPDTILNFPAETYTKELEEMQRVTK 147

[Close]

BLAST of Csor.00g034020 vs. TAIR 10
Match: AT3G54320.3 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 2.7e-28
Identity = 66/112 (58.93%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 24  RRRRRSCKGSRQPPKSAADQS-TTTKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQRKK 83
           +R +R+ K S    KS    S  +T+RSS +RGV+RHRWTGRFEAHLWDK SWN  Q KK
Sbjct: 36  KRAKRAKKSSPSGDKSHNPTSPASTRRSSIYRGVTRHRWTGRFEAHLWDKSSWNSIQNKK 95

Query: 84  GKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSASDYENEIKIMKNVTK 132
           GKQ   GAYD EE+AA  YDLAALKYWG  T  NF A  Y  E++ M+ VTK
Sbjct: 96  GKQVYLGAYDSEEAAAHTYDLAALKYWGPDTILNFPAETYTKELEEMQRVTK 147

[Close]

BLAST of Csor.00g034020 vs. TAIR 10
Match: AT2G41710.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 122.1 bits (305), Expect = 3.5e-28
Identity = 62/114 (54.39%), Postives = 79/114 (69.30%), Query Frame = 0


Query: 25  RRRRSCKG----SRQPPKSAADQSTTTKRSSRFRGVSRHRWTGRFEAHLWDKGSWNPTQR 84
           ++ R C      S+ PP       T  KRSS +RGV+RHRWTGR+EAHLWDK +WN  Q 
Sbjct: 45  KKERGCTAKERISKMPP------CTAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQN 104

Query: 85  KKGKQ---GAYDEEESAARAYDLAALKYWGTSTFTNFSASDYENEIKIMKNVTK 132
           KKGKQ   GAYD+EE+AARAYDLAALKYWG  T  NF  +DY  +++ M+N+++
Sbjct: 105 KKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLEEMQNLSR 152

The following BLAST results are available for this feature:

BLAST of Csor.00g034020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0JPZ8	1.7e-27	53.33	AP2-like ethylene-responsive transcription factor At1g79700 OS=Arabidopsis thali...	[more]
X5HYT8	2.9e-27	57.02	AP2-like ethylene-responsive transcription factor SMOS1 OS=Oryza sativa subsp. j...	[more]
Q6X5Y6	3.8e-27	58.93	Ethylene-responsive transcription factor WRI1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q8GWK2	5.0e-27	54.39	AP2-like ethylene-responsive transcription factor At2g41710 OS=Arabidopsis thali...	[more]
Q94AN4	1.5e-26	54.62	AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thali...	[more]

BLAST of Csor.00g034020 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595274.1	6.09e-98	100.00	Ethylene-responsive transcription factor WRI1, partial [Cucurbita argyrosperma s...	[more]
KAG6599026.1	9.69e-88	99.24	Ethylene-responsive transcription factor WRI1, partial [Cucurbita argyrosperma s...	[more]
XP_022946897.1	6.81e-86	97.76	ethylene-responsive transcription factor WRI1-like [Cucurbita moschata]	[more]
XP_022998979.1	9.71e-81	93.28	ethylene-responsive transcription factor WRI1-like [Cucurbita maxima]	[more]
XP_023546415.1	9.71e-81	93.28	ethylene-responsive transcription factor WRI1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g034020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4W8	3.30e-86	97.76	ethylene-responsive transcription factor WRI1-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1KFT6	4.70e-81	93.28	ethylene-responsive transcription factor WRI1-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1DD61	1.09e-62	72.41	ethylene-responsive transcription factor WRI1-like OS=Momordica charantia OX=367...	[more]
A0A0A0KJ57	1.26e-62	75.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G404260 PE=4 SV=1	[more]
A0A1S3C431	1.72e-61	74.83	AP2-like ethylene-responsive transcription factor At1g79700 OS=Cucumis melo OX=3...	[more]

BLAST of Csor.00g034020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79700.1	1.2e-28	53.33	Integrase-type DNA-binding superfamily protein	[more]
AT1G79700.2	1.2e-28	53.33	Integrase-type DNA-binding superfamily protein	[more]
AT3G54320.1	2.7e-28	58.93	Integrase-type DNA-binding superfamily protein	[more]
AT3G54320.3	2.7e-28	58.93	Integrase-type DNA-binding superfamily protein	[more]
AT2G41710.1	3.5e-28	54.39	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 52..121 e-value: 5.2E-16 score: 69.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 51..107 e-value: 5.5E-10 score: 39.3
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 52..115 score: 17.622223
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 51..117 e-value: 5.35703E-16 score: 65.3707
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 51..116 e-value: 9.4E-22 score: 78.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..59
None	No IPR available	PANTHER	PTHR32467	AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR	coord: 32..131
None	No IPR available	PANTHER	PTHR32467:SF116	BINDING PROTEIN, PUTATIVE-RELATED	coord: 32..131
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 51..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g034020.m01	Csor.00g034020.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity