Csor.00g033980 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g033980
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCsor_Chr07: 4664705 .. 4670362 (+)
RNA-Seq ExpressionCsor.00g033980
SyntenyCsor.00g033980
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTGGCCTCCTCATCCTCGGCTCCGCCTCCTCCTCCTCCTCCTCCAGCTCCATTGCCGGACGTTGCTCCCGCCGCCCTAGCCACTCCAAGGCCCTAAATTCCTCGCTTTCCAACGTATTTCCCACTGGAACGCACTCACCGCTTTCTTCTCGTCCTTCCACTATCCATTCCCGTTCTCCTCTTCTGTCCTCTGTCCAATGGGACATTGCTGGCGCCTCATCCGGCGGGAAAACTTCTCTCCGTCACTACGCTGACGTCGCATCGAAGCTCGCCGAGCGCGGTAAGCTTGACGATTTTGCGATGGTGGTGGAAAATGTGGTCGTCGCTGGTGTTGAGCCCTCGCAATTCGCTGCGGTGTTGGCTGTTGAGCTTGTGGCCAAGGGGATTTCGCGGTGTCTTAGAGAGGGAAATCTTTGGAATGTCGTGCAGGTTTTGAGGAAGGTCGAGGAGCTTGGGATTTCGGCTGTGGGACTATGCGATGAGTCGGCTGTAGAGTCGCTGAGGAGAGAATGTCGTAGAATTTCCAAGTCCGGAGACTTAGAGGAGCTCGTCGAATTCATGGAGGTTCTTTCCGGTAACTTAGGAATTTGTCATACGCTTGCTATTCTTCTTAATTTTGCGGCAGGAATATATTGAAATGTAGCTGAGTAGACATTGTCACATCAGACTTAACGAAGCATTCTTATGATTAGGGCTGGTAATTCTAGGATGAAACTGTTTTTGGGAAATTTTCCATGCTTGTTCCTTGTTAAGTGTTGTAAATTTAACGTTAAAGCTTAGCAGAATTGTGAAATCTAAACTCAATTACTTGAATATGGAAATTGATTATTACTAAACAACCTGCTTCTATTAATGTTCATGATTGGATTTCCAACAGGTATTTATTCGCATTGTTTAACAATTAGCTACCGTTTTCAGGTTTTGGTTTCTCGATCAAAGAAATGATGAAGCCGTCCGAAGTAATAAAACTGTGTGTTGATGCCCGTAATCCAAAAATAGCAATTAGGTAAACCTTCATTTGTGTTATCAAATGCATCTTCAAGGGGTTAAAATTCAATGAAGTTTGTAACATACACTTGGGGCTGTTTCAATTGAAAGGACTTTACGTATATTGGAGCATGGAGGGTGAGGAACCATTACAAGAATTAATGTTTGTAGTTGTTCGGTTTTTAGTTGACTTGATAGTTTTCTTCACTGTATTTGGAATCCTCAAATCGGTGTCGATACAATATACGGTATCTGAACCACTAATTTGTTGTTGATGAATTATACAGGTACGCTAGCATCTTACCACAAGCAGATATATTGTTCTGTACAGTTATAAATGAATTTGGCAAGAAAAGGGACTTGAAATCTGCTTTCATGGCATATACAGAATCCAAGGCTCATATGAATGGTCCTAATATGTATATCTACCGCTCAATAATTGATGTCTGTGGTCTCTGTGGTGACTACAAGAAATCGAGGAACATCTATCATCAGGTACTGTGCTAACTGCAATGCGAAATTATGTTTAATGCTTGTTGTTTACACATGAAAGATGATTTTGCTTGAATAGCTATGCTAAGGTAATTCTTGCTCGAACATCTGTCTAGAAAGGGCGGTTGTAGTTTATAAGCATCTGAGCAGTTGTAGTTCAGAAAATAAAGCACTGTTCTTGACTATCGGTTTCAACGTCCTTAGTGTGCAACAGAGACTCGTCATAAATTAGAGACTTCAGGAAAATTTGATCTTGAATGTATTTATTAGATGTGTATCAGCTTTAGGTTTAGCAGGTTAACAATTGTTACTTTCTTTTTGGAAGTTCTTATATTCTTTAGATCTCTACAAGAGTTATATTCACAGAGATTCAGGTTTTCTATTTTTCAATTTTCTGCAGGATTTGCTCAGTCAGAATGTCACCCCGAATGTATATGTCTTCAACAGTCTCATGAATGTAAACGCCCATGATTTGAACTACATCTTTCAATTGTACAAAAATATGCAGGTAATCCTTCCCTCTCTCTCTCAACATACAACAACATTGGAAGAAAATAAAAGATTGGAGACATGAGTTCCTTCATTGTTTTTCAACATATTCAATGCATATCCCTATTCCCAGTATTTAATCATGCTTTAGAAGATCGAAGATACAGAGTTCATTGGTGATGCGACATATCTGATATGAGTACTCATAAATTCAGAATCTTGGTGTACCAGCTGATATGGCCTCATATAATATCCTTCTCAAGGCCTGTTGCCTAGCAGGAAGAGTTGATCTGGCACAGGACATTTACAGGGAAGTAAAGCATTTGGAGACAACAGGTGTGTTGAAGTTGGATGTCTTCACCTACAGCACAATTGTAAAGGTGCAAGATCTACTCGGCGTGTAAATTTCATTCGTAAAAATTCTAGCCGTGAAATACTATGGTACAGTATCCTCGTATTTTGAGGATTTATTATTATTTTTCAGGTTTTTGCAGATGCGAAATTGTGGAAAATGGCACTCAGAGTCAAAGAAGACATGCAATCAGCTGGAGTATCACCAAATATGGTGACCTGGTCTTCATTGATCAGTTCATGTGCTAATTCGGGTCTTGTTGAGTTGGCAATCCAATTGTTCGAAGAGATGGTTTCAGCAGGATGTGAACCTAATACACAGTGTTGTAATATTCTTTTACATGCTTGTGTCGAAGCTCGCCAGTTTGATAGAGCTTTTCGTCTATTTCGCTCCTGGAGGGAAAAGGAACTTTGGGATGATATAGAGAGAAGAAACAGCACCGATGACAATTTGAATGCTGATCCAACATCTCAACTGTGTATTACTAATATGCCTAACGCTCAATCTCATGTACATCAAATCAAGTTTGCTGGGAATTTTGCTTTCAAACCTACAATTACAACCTATAATATTCTAATGAAAGCTTGTGGTACTGATTATTACCATGCTAAAGCTTTGATGGAGGAGATGAAAAGTGTTGGCCTTACACCCAATCACATTAGCTGGTCAATTTTGATTGACATATGTGGAGGATCTCGTGACGTGAAAAGTGCTGTGCAGGTAAAAAATGTAGTTTTTCTCTCGATTAAGTTATATTTCCTCTTAGCATTGGAAACATTGTTGATCGAGGTTACTTTCCATTGTCGTCAAAATTTCATTGCTCATTACACATTTCTATCCATCACCTGTTCTCCCGGAGGCGAAAGACTTCCTTTCCTAAGACAGCTGAGGAGGATAGAAAAGGGGGGATGGGGGGATAAGGAGAGCTTTAGCCTTGAGAATATAATTCTAGTTGGTGTGGTATTGCTGAATGCTTTTATGGTTTCTTCCTTCCTTCTTACATGCCTCTGTATTTGATCATTTAGCTTCGTTTTAATGCACTGTTCGCTTGCAATGTTTATTTTCAGTGCAGATCTTGACAACCATGCGTATGGCTGGAGTCGATCCTGATGTTGTTGCATACACGACGGCTATCAAGGTTTCAATCTCTCTTGTCATACTTTTTAAGTCTAACCATGACCATTAGACGGACATCTGAAGTTCATTATAGTGATGCCCCCATACCAGCATAAATTAGTTGGCTATTTTCTTAAAACATCCTTGTCATTGGCAATGGTATAGGTTTGCGTTGGATGTAAAAACTGGAGGCTGGCATTTTCATTATTTGAAGAAATGAAAAGATTTGAGATACAGCCAAATTTAGTAAGTATTGATCTTCTTTTTCCGTTCAACATGCAAGAGTCACAAACCATCCGCTAGCTTGATTGTCTTTCGTTAGCAGCTAAGAATTTAAGTGCTATAGGCCACCAACCATGGAAGGAAAAGTGAGGCATCCATAATCATGGTAGCTTTCATTTTGCAGGTGACCTACAGTACACTTCTGAGAGCCCGCAGTACTTATGGCTCATTACACGAAGTACAGCAATGCCTTGCTATTTACCAGGACATGAGGAAATCAGGGTAACGTATACAAAATTGATGCTAGGTTAAATTACAAGTTTAGTTCATGAACTTTCAAGTTTGTCTATTTGGTCCCTAAACTTTAAATAGTATTGAATAGCTCCTTCAACTTTCAAATTTGTGTGTCAATGGGCCCCTAAACTTTTTATAAGTAAATAATCTATTAGATATAAAACTGAATTTTTTTTATGCATGATAAGACCCTAAACTTTCAATAGGTCATTAATGTATTAACTTTTTTATAATTAATTGTTCTATTAGATATAAAGTTGAAAGTTCGTGATCTTAGACAAATTTGAAGTTCAAAGTTTTAGGGACATTTAGACAGACTAAATAGACAATGTTGAAAATTCATGAACTAAGCTTGTAATTTAATCTAGATTTGAGCGTCTTTTTTCACAATAGAATCATGTCGAGATCCAATTACCGCTACTGACATTTAGTCTCCTATTCATGATAGGTATAGTGTTTGCCAACAATGAAGTAAAAATAAATCAGTCTTTTTCCATTCTTCCAGCTTAGCGAGCATTTTTGCAATGCCAGAAGATGCCTTTGATTTCTTTGCATATGAACGGACATTTATTTCAGACCAAAACATTTTCAGGTTCAAATCCGACGACCATTATCTCAAGGAGTTGATTGCAGAATGGTGTGAAGGAGTTCTACAGAATAACAATCAGCAGCAAGAGGAGGCGACAGCACCCTGTAATAGAACCGACATCGGGAAACCACGATGTTTAATTCTTGAAAAAGTTGCTGAGCATCTGCAGAAGAGTTTTACCGAAAGCCTAGCGATTGACCTGCAAGAGCTCACAAAGGTTCGCATTATTATGAACTGAATTTTCTATTTGGAAAACCTGCACCAGTTTGCCCTTAAAATACGCCTTGTTTAAATTATCTCAAATTTCAAAAGTATGCCTGCATGAAACTAAGCATCTGGTGAATGTGATCAGGTCGAAGCCCGTATCGTCGTTCTCGCAGTTTTGCGAATGATCAAGGAGAATTATGCATTAGGTAATGCCATACTCCAAAACATATCTACTTGTGAGAATAGTATCATCTGTCTAAGCACACCTCTAAGAATAGTACTGAATATTAGGAATTACAGATCTCCACAATCTCCACAATGGTACGATATTGTCCACTTTCAACATAAGCTCTCATGGCTTTGCTTTAGACTTACTTATAACTTAGTACCAATGTAGATGTATTCCTTACTTATAAATTCATGATCATTCTCTAAATTAGCCAACGTGGGACTCCCTCCCACCCGTCCTCAACACTGAACCCTTGTGGACTTTAGCAGCGTCCTTTGATCCATTAGGGGTGCTAACATTGTTCTCTTGGCTGCAGGAGAATCAGTAAAAGATGATATATTCATCATTTTAGGAGTGAGTAAAGTTGAACCAGATTTAGTTGAACAAAACTTTGAAGTGCGAGATGCAATAACCAAACTCTTGCAATACGAGTTGGGGCTTGAAGTTCTTCCGGCAGGACCTACAACTGTTCCTGATGAAGTGGCTGGTTCAGAAAGCTCTAACATGTCGCTTACAAAACTGAACGGAATTATGGGAAGGAATAAGTACACCACTAGGAAACCAGCAGCTGTGCAGAGGCTTAAGGTTACAAAGAAATCACTGAAAGACTGGCTGCAAAGAAATAGGGATATAATAGAATATCGGTTATCAATACCAAAGAATGATTCTTTTTGTTAA

mRNA sequence

ATGCGTGGCCTCCTCATCCTCGGCTCCGCCTCCTCCTCCTCCTCCTCCAGCTCCATTGCCGGACGTTGCTCCCGCCGCCCTAGCCACTCCAAGGCCCTAAATTCCTCGCTTTCCAACGTATTTCCCACTGGAACGCACTCACCGCTTTCTTCTCGTCCTTCCACTATCCATTCCCGTTCTCCTCTTCTGTCCTCTGTCCAATGGGACATTGCTGGCGCCTCATCCGGCGGGAAAACTTCTCTCCGTCACTACGCTGACGTCGCATCGAAGCTCGCCGAGCGCGGTAAGCTTGACGATTTTGCGATGGTGGTGGAAAATGTGGTCGTCGCTGGTGTTGAGCCCTCGCAATTCGCTGCGGTGTTGGCTGTTGAGCTTGTGGCCAAGGGGATTTCGCGGTGTCTTAGAGAGGGAAATCTTTGGAATGTCGTGCAGGTTTTGAGGAAGGTCGAGGAGCTTGGGATTTCGGCTGTGGGACTATGCGATGAGTCGGCTGTAGAGTCGCTGAGGAGAGAATGTCGTAGAATTTCCAAGTCCGGAGACTTAGAGGAGCTCGTCGAATTCATGGAGGTTCTTTCCGGTTTTGGTTTCTCGATCAAAGAAATGATGAAGCCGTCCGAAGTAATAAAACTGTGTGTTGATGCCCGTAATCCAAAAATAGCAATTAGGTACGCTAGCATCTTACCACAAGCAGATATATTGTTCTGTACAGTTATAAATGAATTTGGCAAGAAAAGGGACTTGAAATCTGCTTTCATGGCATATACAGAATCCAAGGCTCATATGAATGGTCCTAATATGTATATCTACCGCTCAATAATTGATGTCTGTGGTCTCTGTGGTGACTACAAGAAATCGAGGAACATCTATCATCAGGATTTGCTCAGTCAGAATGTCACCCCGAATGTATATGTCTTCAACAGTCTCATGAATGTAAACGCCCATGATTTGAACTACATCTTTCAATTGTACAAAAATATGCAGAATCTTGGTGTACCAGCTGATATGGCCTCATATAATATCCTTCTCAAGGCCTGTTGCCTAGCAGGAAGAGTTGATCTGGCACAGGACATTTACAGGGAAGTAAAGCATTTGGAGACAACAGATGCGAAATTGTGGAAAATGGCACTCAGAGTCAAAGAAGACATGCAATCAGCTGGAGTATCACCAAATATGGTGACCTGGTCTTCATTGATCAGTTCATGTGCTAATTCGGGTCTTGTTGAGTTGGCAATCCAATTGTTCGAAGAGATGGTTTCAGCAGGATGTGAACCTAATACACAGTGTTGTAATATTCTTTTACATGCTTGTGTCGAAGCTCGCCAGTTTGATAGAGCTTTTCGTCTATTTCGCTCCTGGAGGGAAAAGGAACTTTGGGATGATATAGAGAGAAGAAACAGCACCGATGACAATTTGAATGCTGATCCAACATCTCAACTGTGTATTACTAATATGCCTAACGCTCAATCTCATGTACATCAAATCAAGTTTGCTGGGAATTTTGCTTTCAAACCTACAATTACAACCTATAATATTCTAATGAAAGCTTGTGGTACTGATTATTACCATGCTAAAGCTTTGATGGAGGAGATGAAAAGTGTTGGCCTTACACCCAATCACATTAGCTGGTCAATTTTGATTGACATATGTGGAGGATCTCGTGACGTGAAAAGTGCTGTGCAGATCTTGACAACCATGCGTATGGCTGGAGTCGATCCTGATGTTGTTGCATACACGACGGCTATCAAGGTTTGCGTTGGATGTAAAAACTGGAGGCTGGCATTTTCATTATTTGAAGAAATGAAAAGATTTGAGATACAGCCAAATTTAGTGACCTACAGTACACTTCTGAGAGCCCGCAGTACTTATGGCTCATTACACGAAGTACAGCAATGCCTTGCTATTTACCAGGACATGAGGAAATCAGGGTTCAAATCCGACGACCATTATCTCAAGGAGTTGATTGCAGAATGGTGTGAAGGAGTTCTACAGAATAACAATCAGCAGCAAGAGGAGGCGACAGCACCCTGTAATAGAACCGACATCGGGAAACCACGATGTTTAATTCTTGAAAAAGTTGCTGAGCATCTGCAGAAGAGTTTTACCGAAAGCCTAGCGATTGACCTGCAAGAGCTCACAAAGGTCGAAGCCCGTATCGTCGTTCTCGCAGTTTTGCGAATGATCAAGGAGAATTATGCATTAGGAGAATCAGTAAAAGATGATATATTCATCATTTTAGGAGTGAGTAAAGTTGAACCAGATTTAGTTGAACAAAACTTTGAAGTGCGAGATGCAATAACCAAACTCTTGCAATACGAGTTGGGGCTTGAAGTTCTTCCGGCAGGACCTACAACTGTTCCTGATGAAGTGGCTGGTTCAGAAAGCTCTAACATGTCGCTTACAAAACTGAACGGAATTATGGGAAGGAATAAGTACACCACTAGGAAACCAGCAGCTGTGCAGAGGCTTAAGGTTACAAAGAAATCACTGAAAGACTGGCTGCAAAGAAATAGGGATATAATAGAATATCGGTTATCAATACCAAAGAATGATTCTTTTTGTTAA

Coding sequence (CDS)

ATGCGTGGCCTCCTCATCCTCGGCTCCGCCTCCTCCTCCTCCTCCTCCAGCTCCATTGCCGGACGTTGCTCCCGCCGCCCTAGCCACTCCAAGGCCCTAAATTCCTCGCTTTCCAACGTATTTCCCACTGGAACGCACTCACCGCTTTCTTCTCGTCCTTCCACTATCCATTCCCGTTCTCCTCTTCTGTCCTCTGTCCAATGGGACATTGCTGGCGCCTCATCCGGCGGGAAAACTTCTCTCCGTCACTACGCTGACGTCGCATCGAAGCTCGCCGAGCGCGGTAAGCTTGACGATTTTGCGATGGTGGTGGAAAATGTGGTCGTCGCTGGTGTTGAGCCCTCGCAATTCGCTGCGGTGTTGGCTGTTGAGCTTGTGGCCAAGGGGATTTCGCGGTGTCTTAGAGAGGGAAATCTTTGGAATGTCGTGCAGGTTTTGAGGAAGGTCGAGGAGCTTGGGATTTCGGCTGTGGGACTATGCGATGAGTCGGCTGTAGAGTCGCTGAGGAGAGAATGTCGTAGAATTTCCAAGTCCGGAGACTTAGAGGAGCTCGTCGAATTCATGGAGGTTCTTTCCGGTTTTGGTTTCTCGATCAAAGAAATGATGAAGCCGTCCGAAGTAATAAAACTGTGTGTTGATGCCCGTAATCCAAAAATAGCAATTAGGTACGCTAGCATCTTACCACAAGCAGATATATTGTTCTGTACAGTTATAAATGAATTTGGCAAGAAAAGGGACTTGAAATCTGCTTTCATGGCATATACAGAATCCAAGGCTCATATGAATGGTCCTAATATGTATATCTACCGCTCAATAATTGATGTCTGTGGTCTCTGTGGTGACTACAAGAAATCGAGGAACATCTATCATCAGGATTTGCTCAGTCAGAATGTCACCCCGAATGTATATGTCTTCAACAGTCTCATGAATGTAAACGCCCATGATTTGAACTACATCTTTCAATTGTACAAAAATATGCAGAATCTTGGTGTACCAGCTGATATGGCCTCATATAATATCCTTCTCAAGGCCTGTTGCCTAGCAGGAAGAGTTGATCTGGCACAGGACATTTACAGGGAAGTAAAGCATTTGGAGACAACAGATGCGAAATTGTGGAAAATGGCACTCAGAGTCAAAGAAGACATGCAATCAGCTGGAGTATCACCAAATATGGTGACCTGGTCTTCATTGATCAGTTCATGTGCTAATTCGGGTCTTGTTGAGTTGGCAATCCAATTGTTCGAAGAGATGGTTTCAGCAGGATGTGAACCTAATACACAGTGTTGTAATATTCTTTTACATGCTTGTGTCGAAGCTCGCCAGTTTGATAGAGCTTTTCGTCTATTTCGCTCCTGGAGGGAAAAGGAACTTTGGGATGATATAGAGAGAAGAAACAGCACCGATGACAATTTGAATGCTGATCCAACATCTCAACTGTGTATTACTAATATGCCTAACGCTCAATCTCATGTACATCAAATCAAGTTTGCTGGGAATTTTGCTTTCAAACCTACAATTACAACCTATAATATTCTAATGAAAGCTTGTGGTACTGATTATTACCATGCTAAAGCTTTGATGGAGGAGATGAAAAGTGTTGGCCTTACACCCAATCACATTAGCTGGTCAATTTTGATTGACATATGTGGAGGATCTCGTGACGTGAAAAGTGCTGTGCAGATCTTGACAACCATGCGTATGGCTGGAGTCGATCCTGATGTTGTTGCATACACGACGGCTATCAAGGTTTGCGTTGGATGTAAAAACTGGAGGCTGGCATTTTCATTATTTGAAGAAATGAAAAGATTTGAGATACAGCCAAATTTAGTGACCTACAGTACACTTCTGAGAGCCCGCAGTACTTATGGCTCATTACACGAAGTACAGCAATGCCTTGCTATTTACCAGGACATGAGGAAATCAGGGTTCAAATCCGACGACCATTATCTCAAGGAGTTGATTGCAGAATGGTGTGAAGGAGTTCTACAGAATAACAATCAGCAGCAAGAGGAGGCGACAGCACCCTGTAATAGAACCGACATCGGGAAACCACGATGTTTAATTCTTGAAAAAGTTGCTGAGCATCTGCAGAAGAGTTTTACCGAAAGCCTAGCGATTGACCTGCAAGAGCTCACAAAGGTCGAAGCCCGTATCGTCGTTCTCGCAGTTTTGCGAATGATCAAGGAGAATTATGCATTAGGAGAATCAGTAAAAGATGATATATTCATCATTTTAGGAGTGAGTAAAGTTGAACCAGATTTAGTTGAACAAAACTTTGAAGTGCGAGATGCAATAACCAAACTCTTGCAATACGAGTTGGGGCTTGAAGTTCTTCCGGCAGGACCTACAACTGTTCCTGATGAAGTGGCTGGTTCAGAAAGCTCTAACATGTCGCTTACAAAACTGAACGGAATTATGGGAAGGAATAAGTACACCACTAGGAAACCAGCAGCTGTGCAGAGGCTTAAGGTTACAAAGAAATCACTGAAAGACTGGCTGCAAAGAAATAGGGATATAATAGAATATCGGTTATCAATACCAAAGAATGATTCTTTTTGTTAA

Protein sequence

MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRSPLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAVLAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGDLEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINEFGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTPNVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYREVKHLETTDAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIERRNSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYHAKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELIAEWCEGVLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTESLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVRDAITKLLQYELGLEVLPAGPTTVPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRLKVTKKSLKDWLQRNRDIIEYRLSIPKNDSFC
Homology
[Close]
BLAST of Csor.00g033980 vs. ExPASy Swiss-Prot
Match: Q8GYL7 (Pentatricopeptide repeat-containing protein At5g02830, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g02830 PE=2 SV=3)

HSP 1 Score: 790.8 bits (2041), Expect = 1.5e-227
Identity = 430/865 (49.71%), Postives = 592/865 (68.44%), Query Frame = 0 

Query: 4   LLILGSASSSSSSSSIAGRC---SRRPSHSKALNSSLSNVFPT--GTHSPLSSRPSTIHS 63
           +++ GS+S+ ++      RC   +   +     NSS + + P+    HSP  +  S  HS
Sbjct: 5   VIVFGSSSAITNPHHHHRRCYATAPESNRKTKSNSSFTKLLPSLPQQHSPSPASVSATHS 64

Query: 64  RSPLLSS-VQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVV-AGVEPSQ 123
            S   S+ V+W   G       SL +YAD ASKLAE G+++D A++ E +   +G   ++
Sbjct: 65  LSSHFSNVVRWIPDG-------SLEYYADFASKLAEDGRIEDVALIAETLAAESGANVAR 124

Query: 124 FAAVLAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRIS 183
           FA+++  +L++KGIS  LR+G + +VV  L+++E++GI+ + L D+S+V+ +R++ R ++
Sbjct: 125 FASMVDYDLLSKGISSNLRQGKIESVVYTLKRIEKVGIAPLDLVDDSSVKLMRKQFRAMA 184

Query: 184 KSGDLEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCT 243
            S  +E+ ++ ME+L+G GF IKE++ P +V+K CV+  NP++AIRYA +LP  ++L C 
Sbjct: 185 NSVQVEKAIDLMEILAGLGFKIKELVDPFDVVKSCVEISNPQLAIRYACLLPHTELLLCR 244

Query: 244 VINEFGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQ 303
           +I+ FGKK D+ S   AY   K  ++ PNMYI R++IDVCGLCGDY KSR IY +DLL +
Sbjct: 245 IIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIY-EDLLKE 304

Query: 304 NVTPNVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQD 363
           N+ PN+YV NSLMNVN+HDL Y  ++YKNMQ L V ADM SYNILLK CCLAGRVDLAQD
Sbjct: 305 NIKPNIYVINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQD 364

Query: 364 IYREVKHLETT------------------DAKLWKMALRVKEDMQSAGVSPNMVTWSSLI 423
           IY+E K +E++                  DAK+WK AL+VK+DM+S GV+PN  TWSSLI
Sbjct: 365 IYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLI 424

Query: 424 SSCANSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELW 483
           S+CAN+GLVE A  LFEEM+++GCEPN+QC NILLHACVEA Q+DRAFRLF+SW+   + 
Sbjct: 425 SACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVN 484

Query: 484 DDIERRNSTDDNLNADPTSQLCIT------NMPNAQSHVHQIKFAGNFAFKPTITTYNIL 543
           + +      DD ++   TS   I       ++ N  S+   I+ +  F FKPT  TYNIL
Sbjct: 485 ESL----YADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNIL 544

Query: 544 MKACGTDYYHAKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDP 603
           +KACGTDYY  K LM+EMKS+GL+PN I+WS LID+CGGS DV+ AV+IL TM  AG  P
Sbjct: 545 LKACGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRP 604

Query: 604 DVVAYTTAIKVCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCL 663
           DVVAYTTAIK+C   K  +LAFSLFEEM+R++I+PN VTY+TLL+ARS YGSL EV+QCL
Sbjct: 605 DVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCL 664

Query: 664 AIYQDMRKSGFKSDDHYLKELIAEWCEGVLQNNNQQQEEATAPCNRTDIGKPRCLILEKV 723
           AIYQDMR +G+K +DH+LKELI EWCEGV+Q N Q Q++ +      + G+P  L++EKV
Sbjct: 665 AIYQDMRNAGYKPNDHFLKELIEEWCEGVIQENGQSQDKISDQ-EGDNAGRPVSLLIEKV 724

Query: 724 AEHLQKSFTESLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIILGVSKVEP 783
           A H+Q+    +LAIDLQ LTK+EAR+VVLAVLRMIKE+Y  G+ V DD+ II+G  +   
Sbjct: 725 ATHMQERTAGNLAIDLQGLTKIEARLVVLAVLRMIKEDYMRGDVVIDDVLIIIGTDEANT 784

Query: 784 DLVEQNFEVRDAITKLLQYELGLEVLPAGPTTVPDEVAGSESSNMSLTKLNGIMGRNKYT 838
              +Q   V++A+ KLL+ EL L VLPAG   +  +    + ++   TK    +     +
Sbjct: 785 VSGKQEITVQEALVKLLRDELSLVVLPAGQRNIIQDAHCVDDADQENTKSFVSIS----S 844

[Close]
BLAST of Csor.00g033980 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 7.5e-25
Identity = 125/603 (20.73%), Postives = 265/603 (43.95%), Query Frame = 0 

Query: 84  YADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAVLAVELVAKGISRCLREGNLWN-V 143
           Y  + S  A  G+  +   V + +   G +P+     + + +  K        G  WN +
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK-------MGTPWNKI 270

Query: 144 VQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGDL-EELVEFMEVLSGFGFSIKEM 203
             ++ K++  GI+     D     +L   C+R    G L +E  +  E +   GFS  + 
Sbjct: 271 TSLVEKMKSDGIAP----DAYTYNTLITCCKR----GSLHQEAAQVFEEMKAAGFSY-DK 330

Query: 204 MKPSEVIKLCVDARNPKIAIRYASIL-----PQADILFCTVINEFGKKRDLKSAFMAYTE 263
           +  + ++ +   +  PK A++  + +       + + + ++I+ + +   L  A     +
Sbjct: 331 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQ 390

Query: 264 SKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTPNVYVFNSLMNV--NAH 323
                  P+++ Y +++      G  + + +I+ +++ +    PN+  FN+ + +  N  
Sbjct: 391 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF-EEMRNAGCKPNICTFNAFIKMYGNRG 450

Query: 324 DLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYREVKHL------ETTD 383
               + +++  +   G+  D+ ++N LL      G       +++E+K        ET +
Sbjct: 451 KFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFN 510

Query: 384 AKL--------WKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSA 443
             +        ++ A+ V   M  AGV+P++ T+++++++ A  G+ E + ++  EM   
Sbjct: 511 TLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDG 570

Query: 444 GCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIERRNSTDDNLNADPTSQLC 503
            C+PN      LLHA    ++      L  S  E+     IE R      L        C
Sbjct: 571 RCKPNELTYCSLLHAYANGKEIG----LMHSLAEEVYSGVIEPRAVLLKTLVL--VCSKC 630

Query: 504 ITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYHAKA--LMEEMKSVGLTPN 563
              +P A+    ++K  G   F P ITT N ++   G     AKA  +++ MK  G TP+
Sbjct: 631 -DLLPEAERAFSELKERG---FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 690

Query: 564 HISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRL--AFSL 623
             +++ L+ +   S D   + +IL  +   G+ PD+++Y T I     C+N R+  A  +
Sbjct: 691 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAY--CRNTRMRDASRI 750

Query: 624 FEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELIAE 660
           F EM+   I P+++TY+T +    +Y +    ++ + + + M K G + + +    ++  
Sbjct: 751 FSEMRNSGIVPDVITYNTFI---GSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 781

[Close]
BLAST of Csor.00g033980 vs. ExPASy Swiss-Prot
Match: Q940A6 (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g19440 PE=2 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 6.4e-24
Identity = 106/476 (22.27%), Postives = 197/476 (41.39%), Query Frame = 0 

Query: 233 LFCTVINEFGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDY---------- 292
           LF T IN F K   ++ A   +++ +     PN+  + ++ID  G+CG Y          
Sbjct: 275 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 334

Query: 293 ----------------------KKSRNIYH--QDLLSQNVTPNVYVFNSLMN--VNAHDL 352
                                 K+  + Y   +++  +   PNV V+N+L++  + A  L
Sbjct: 335 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 394

Query: 353 NYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYREVKHLE----------- 412
           N   ++   M + G+    ++YN L+K  C  G+ D A+ + +E+  +            
Sbjct: 395 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 454

Query: 413 ---TTDAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSAGC 472
                   ++  ALR   +M    +SP     ++LIS     G    A++L+ + ++ G 
Sbjct: 455 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 514

Query: 473 EPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIERRNSTDDNLNADPTSQLCIT 532
             +T+  N LLH   EA + D AFR+ +         +I  R    D ++ +     C  
Sbjct: 515 VVDTRTSNALLHGLCEAGKLDEAFRIQK---------EILGRGCVMDRVSYNTLISGCCG 574

Query: 533 NMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACG----TDYYHAKALMEEMKSVGLTPN 592
                ++ +   +       KP   TY+IL+  CG         A    ++ K  G+ P+
Sbjct: 575 KKKLDEAFMFLDEMVKR-GLKPDNYTYSILI--CGLFNMNKVEEAIQFWDDCKRNGMLPD 634

Query: 593 HISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFE 652
             ++S++ID C  +   +   +    M    V P+ V Y   I+         +A  L E
Sbjct: 635 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 694

Query: 653 EMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELI 655
           +MK   I PN  TY++L++  S    +  V++   ++++MR  G + +  +   LI
Sbjct: 695 DMKHKGISPNSATYTSLIKGMSI---ISRVEEAKLLFEEMRMEGLEPNVFHYTALI 735

[Close]
BLAST of Csor.00g033980 vs. ExPASy Swiss-Prot
Match: B8Y6I0 (Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=4577 GN=PPR10 PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 7.1e-23
Identity = 94/397 (23.68%), Postives = 166/397 (41.81%), Query Frame = 0 

Query: 269 YRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTPNVYVFNSLMNV---NAHDLNYIFQLYKN 328
           Y +++      G Y+++  ++  +L  Q V P +  +N +++V          I  L   
Sbjct: 177 YTTVLHALSRAGRYERALELF-AELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDE 236

Query: 329 MQNLGVPADMASYNILLKACCLAGRVDLAQDIYREVKHLETTDAKLWKMALRVKEDMQSA 388
           M+  GV  D  + + ++ ACC  G VD A   +                     ED+++ 
Sbjct: 237 MRAAGVEPDGFTASTVIAACCRDGLVDEAVAFF---------------------EDLKAR 296

Query: 389 GVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRA 448
           G +P +VT+++L+     +G    A+++  EM   GC+P+    N L      A  F+ A
Sbjct: 297 GHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEA 356

Query: 449 FRLFRSWREKELWDDIERRNSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNFAFKPT 508
            R   +   K L  +    N+         T+   +  +  A +   Q+K  G   F P 
Sbjct: 357 ARCLDTMASKGLLPNAFTYNTV-------MTAYGNVGKVDEALALFDQMKKTG---FVPN 416

Query: 509 ITTYNILMKACG--TDYYHAKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILT 568
           + TYN+++   G  + +     ++ EM   G TPN ++W+ ++ +CG         ++L 
Sbjct: 417 VNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLE 476

Query: 569 TMRMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYG 628
            MR  GV+     Y T I     C +   AF ++ EM      P + TY+ LL   S  G
Sbjct: 477 GMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQG 536

Query: 629 SLHEVQQCLAIYQDMRKSGFKSDDHYLKELIAEWCEG 661
                Q   +I   MR  GFK ++     L+  + +G
Sbjct: 537 DWSTAQ---SIVSKMRTKGFKPNEQSYSLLLQCYAKG 538

[Close]
BLAST of Csor.00g033980 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.2e-22
Identity = 104/441 (23.58%), Postives = 188/441 (42.63%), Query Frame = 0 

Query: 232 ILFCTVINEFGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIID-VCGLCGDYKKSRNIYH 291
           I + TV+N + +  +L   +      K     PN YIY SII  +C +C    ++   + 
Sbjct: 282 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC-KLAEAEEAF- 341

Query: 292 QDLLSQNVTPNVYVFNSLMN--VNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLA 351
            +++ Q + P+  V+ +L++      D+    + +  M +  +  D+ +Y  ++   C  
Sbjct: 342 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 401

Query: 352 GRVDLAQDIYREV--KHLETTD------------AKLWKMALRVKEDMQSAGVSPNMVTW 411
           G +  A  ++ E+  K LE               A   K A RV   M  AG SPN+VT+
Sbjct: 402 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 461

Query: 412 SSLISSCANSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWRE 471
           ++LI      G ++ A +L  EM   G +PN    N +++   ++   + A +L   +  
Sbjct: 462 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 521

Query: 472 KELWDDIERRNSTDDNLNADPTSQLCITN-------MPNAQSHVHQIKFAGNFAFKPTIT 531
                           LNAD  +   + +       M  AQ  + ++   G    +PTI 
Sbjct: 522 A--------------GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG---LQPTIV 581

Query: 532 TYNILMKACGTD--YYHAKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTM 591
           T+N+LM            + L+  M + G+ PN  +++ L+       ++K+A  I   M
Sbjct: 582 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 641

Query: 592 RMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSL 647
              GV PD   Y   +K     +N + A+ LF+EMK      ++ TYS L++        
Sbjct: 642 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 700

[Close]
BLAST of Csor.00g033980 vs. NCBI nr
Match: KAG6595270.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1675 bits (4339), Expect = 0.0
Identity = 853/853 (100.00%), Postives = 853/853 (100.00%), Query Frame = 0 

Query: 1   MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS 60
           MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS
Sbjct: 1   MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS 60

Query: 61  PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV 120
           PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV
Sbjct: 61  PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV 120

Query: 121 LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD 180
           LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD
Sbjct: 121 LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD 180

Query: 181 LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE 240
           LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE
Sbjct: 181 LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE 240

Query: 241 FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP 300
           FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP
Sbjct: 241 FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP 300

Query: 301 NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE 360
           NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE
Sbjct: 301 NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE 360

Query: 361 VKHLETTDAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSA 420
           VKHLETTDAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSA
Sbjct: 361 VKHLETTDAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSA 420

Query: 421 GCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIERRNSTDDNLNADPTSQLC 480
           GCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIERRNSTDDNLNADPTSQLC
Sbjct: 421 GCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIERRNSTDDNLNADPTSQLC 480

Query: 481 ITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYHAKALMEEMKSVGLTPNHI 540
           ITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYHAKALMEEMKSVGLTPNHI
Sbjct: 481 ITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYHAKALMEEMKSVGLTPNHI 540

Query: 541 SWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFEEM 600
           SWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFEEM
Sbjct: 541 SWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFEEM 600

Query: 601 KRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELIAEWCEG 660
           KRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELIAEWCEG
Sbjct: 601 KRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELIAEWCEG 660

Query: 661 VLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTESLAIDLQELTKVEARIVV 720
           VLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTESLAIDLQELTKVEARIVV
Sbjct: 661 VLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTESLAIDLQELTKVEARIVV 720

Query: 721 LAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVRDAITKLLQYELGLEVLPA 780
           LAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVRDAITKLLQYELGLEVLPA
Sbjct: 721 LAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVRDAITKLLQYELGLEVLPA 780

Query: 781 GPTTVPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRLKVTKKSLKDWLQRNRDII 840
           GPTTVPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRLKVTKKSLKDWLQRNRDII
Sbjct: 781 GPTTVPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRLKVTKKSLKDWLQRNRDII 840

Query: 841 EYRLSIPKNDSFC 853
           EYRLSIPKNDSFC
Sbjct: 841 EYRLSIPKNDSFC 853

[Close]
BLAST of Csor.00g033980 vs. NCBI nr
Match: XP_022963394.1 (pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 1674 bits (4335), Expect = 0.0
Identity = 852/853 (99.88%), Postives = 852/853 (99.88%), Query Frame = 0 

Query: 1   MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS 60
           MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS
Sbjct: 1   MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS 60

Query: 61  PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV 120
           PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV
Sbjct: 61  PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV 120

Query: 121 LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD 180
           LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD
Sbjct: 121 LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD 180

Query: 181 LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE 240
           LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE
Sbjct: 181 LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE 240

Query: 241 FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP 300
           FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP
Sbjct: 241 FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP 300

Query: 301 NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE 360
           NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE
Sbjct: 301 NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE 360

Query: 361 VKHLETTDAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSA 420
           VKHLETTDAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSA
Sbjct: 361 VKHLETTDAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSA 420

Query: 421 GCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIERRNSTDDNLNADPTSQLC 480
           GCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIERRNSTDDNLNADPTSQLC
Sbjct: 421 GCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIERRNSTDDNLNADPTSQLC 480

Query: 481 ITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYHAKALMEEMKSVGLTPNHI 540
           ITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYHAKALMEEMKSVGLTPNHI
Sbjct: 481 ITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYHAKALMEEMKSVGLTPNHI 540

Query: 541 SWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFEEM 600
           SWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFEEM
Sbjct: 541 SWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFEEM 600

Query: 601 KRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELIAEWCEG 660
           KRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELIAEWCEG
Sbjct: 601 KRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELIAEWCEG 660

Query: 661 VLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTESLAIDLQELTKVEARIVV 720
           VLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTESLAIDLQELTKVEARIVV
Sbjct: 661 VLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTESLAIDLQELTKVEARIVV 720

Query: 721 LAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVRDAITKLLQYELGLEVLPA 780
           LAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVRDAITKLLQYELGLEVLPA
Sbjct: 721 LAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVRDAITKLLQYELGLEVLPA 780

Query: 781 GPTTVPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRLKVTKKSLKDWLQRNRDII 840
           GPTT PDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRLKVTKKSLKDWLQRNRDII
Sbjct: 781 GPTTAPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRLKVTKKSLKDWLQRNRDII 840

Query: 841 EYRLSIPKNDSFC 853
           EYRLSIPKNDSFC
Sbjct: 841 EYRLSIPKNDSFC 853

[Close]
BLAST of Csor.00g033980 vs. NCBI nr
Match: XP_022963393.1 (pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 1663 bits (4306), Expect = 0.0
Identity = 852/871 (97.82%), Postives = 852/871 (97.82%), Query Frame = 0 

Query: 1   MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS 60
           MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS
Sbjct: 1   MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS 60

Query: 61  PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV 120
           PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV
Sbjct: 61  PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV 120

Query: 121 LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD 180
           LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD
Sbjct: 121 LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD 180

Query: 181 LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE 240
           LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE
Sbjct: 181 LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE 240

Query: 241 FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP 300
           FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP
Sbjct: 241 FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP 300

Query: 301 NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE 360
           NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE
Sbjct: 301 NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE 360

Query: 361 VKHLETT------------------DAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCA 420
           VKHLETT                  DAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCA
Sbjct: 361 VKHLETTGVLKLDVFTYSTIVKVFADAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCA 420

Query: 421 NSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIE 480
           NSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIE
Sbjct: 421 NSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIE 480

Query: 481 RRNSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYH 540
           RRNSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYH
Sbjct: 481 RRNSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYH 540

Query: 541 AKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIK 600
           AKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIK
Sbjct: 541 AKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIK 600

Query: 601 VCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSG 660
           VCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSG
Sbjct: 601 VCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSG 660

Query: 661 FKSDDHYLKELIAEWCEGVLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTE 720
           FKSDDHYLKELIAEWCEGVLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTE
Sbjct: 661 FKSDDHYLKELIAEWCEGVLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTE 720

Query: 721 SLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVR 780
           SLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVR
Sbjct: 721 SLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVR 780

Query: 781 DAITKLLQYELGLEVLPAGPTTVPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRL 840
           DAITKLLQYELGLEVLPAGPTT PDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRL
Sbjct: 781 DAITKLLQYELGLEVLPAGPTTAPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRL 840

Query: 841 KVTKKSLKDWLQRNRDIIEYRLSIPKNDSFC 853
           KVTKKSLKDWLQRNRDIIEYRLSIPKNDSFC
Sbjct: 841 KVTKKSLKDWLQRNRDIIEYRLSIPKNDSFC 871

[Close]
BLAST of Csor.00g033980 vs. NCBI nr
Match: KAG7027282.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1661 bits (4301), Expect = 0.0
Identity = 851/871 (97.70%), Postives = 851/871 (97.70%), Query Frame = 0 

Query: 1   MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS 60
           MRGLLILGSASSSSSSSSIAGRCSR PSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS
Sbjct: 1   MRGLLILGSASSSSSSSSIAGRCSRHPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS 60

Query: 61  PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV 120
           PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV
Sbjct: 61  PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV 120

Query: 121 LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD 180
           LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD
Sbjct: 121 LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD 180

Query: 181 LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE 240
           LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE
Sbjct: 181 LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE 240

Query: 241 FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP 300
           FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP
Sbjct: 241 FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP 300

Query: 301 NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE 360
           NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE
Sbjct: 301 NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE 360

Query: 361 VKHLETT------------------DAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCA 420
           VKHLETT                  DAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCA
Sbjct: 361 VKHLETTGVLKLDVFTYSTIVKVFADAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCA 420

Query: 421 NSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIE 480
           NSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIE
Sbjct: 421 NSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIE 480

Query: 481 RRNSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYH 540
           RRNSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYH
Sbjct: 481 RRNSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYH 540

Query: 541 AKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIK 600
           AKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIK
Sbjct: 541 AKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIK 600

Query: 601 VCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSG 660
           VCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSG
Sbjct: 601 VCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSG 660

Query: 661 FKSDDHYLKELIAEWCEGVLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTE 720
           FKSDDHYLKELIAEWCEGVLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTE
Sbjct: 661 FKSDDHYLKELIAEWCEGVLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTE 720

Query: 721 SLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVR 780
           SLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVR
Sbjct: 721 SLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVR 780

Query: 781 DAITKLLQYELGLEVLPAGPTTVPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRL 840
           DAITKLLQYELGLEVLPAGPTT PDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRL
Sbjct: 781 DAITKLLQYELGLEVLPAGPTTAPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRL 840

Query: 841 KVTKKSLKDWLQRNRDIIEYRLSIPKNDSFC 853
           KVTKKSLKDWLQRNRDIIEYRLSIPKNDSFC
Sbjct: 841 KVTKKSLKDWLQRNRDIIEYRLSIPKNDSFC 871

[Close]
BLAST of Csor.00g033980 vs. NCBI nr
Match: XP_023517056.1 (pentatricopeptide repeat-containing protein At5g02830, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1617 bits (4186), Expect = 0.0
Identity = 831/862 (96.40%), Postives = 838/862 (97.22%), Query Frame = 0 

Query: 1   MRGLLILGSASSSSSSSS-IAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSR 60
           MRGLLILGSASSSSSSSS IAGRCSRRPSHSKAL SSLSNVFPTGTHSP SSRPSTIHSR
Sbjct: 1   MRGLLILGSASSSSSSSSSIAGRCSRRPSHSKALKSSLSNVFPTGTHSPFSSRPSTIHSR 60

Query: 61  SPLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAA 120
           SPLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVE+VVVAGVEPSQFAA
Sbjct: 61  SPLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVESVVVAGVEPSQFAA 120

Query: 121 VLAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSG 180
           VLAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSG
Sbjct: 121 VLAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSG 180

Query: 181 DLEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVIN 240
           DLEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPK+AIRYASILPQADILFCTVIN
Sbjct: 181 DLEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKMAIRYASILPQADILFCTVIN 240

Query: 241 EFGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVT 300
           EFGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVT
Sbjct: 241 EFGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVT 300

Query: 301 PNVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYR 360
           PNVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYR
Sbjct: 301 PNVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYR 360

Query: 361 EVKHLETT------------------DAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSC 420
           EVKHLETT                  DAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSC
Sbjct: 361 EVKHLETTGVLKLDVFTYSTIVKVFADAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSC 420

Query: 421 ANSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDI 480
           ANSGLVELAI+LFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSW+EKELWD+I
Sbjct: 421 ANSGLVELAIELFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWKEKELWDNI 480

Query: 481 ERRNSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYY 540
           ER+NSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYY
Sbjct: 481 ERKNSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYY 540

Query: 541 HAKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAI 600
           HAKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAI
Sbjct: 541 HAKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAI 600

Query: 601 KVCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKS 660
           KVCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKS
Sbjct: 601 KVCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKS 660

Query: 661 GFKSDDHYLKELIAEWCEGVLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFT 720
           GFKSDDHYLKELIAEWCEGVLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFT
Sbjct: 661 GFKSDDHYLKELIAEWCEGVLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFT 720

Query: 721 ESLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEV 780
           ESLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIILGVSKVEP+LV QNFEV
Sbjct: 721 ESLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIILGVSKVEPELVAQNFEV 780

Query: 781 RDAITKLLQYELGLEVLPAGPTTVPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQR 840
           RDAITKLLQYELGLEVLPAGPTT  DEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQR
Sbjct: 781 RDAITKLLQYELGLEVLPAGPTTALDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQR 840

Query: 841 LKVTKKSLKDWLQRNRDIIEYR 843
           LKVTKKSLKDWLQRNRDIIEYR
Sbjct: 841 LKVTKKSLKDWLQRNRDIIEYR 862

[Close]
BLAST of Csor.00g033980 vs. ExPASy TrEMBL
Match: A0A6J1HJZ6 (pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463609 PE=3 SV=1)

HSP 1 Score: 1674 bits (4335), Expect = 0.0
Identity = 852/853 (99.88%), Postives = 852/853 (99.88%), Query Frame = 0 

Query: 1   MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS 60
           MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS
Sbjct: 1   MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS 60

Query: 61  PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV 120
           PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV
Sbjct: 61  PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV 120

Query: 121 LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD 180
           LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD
Sbjct: 121 LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD 180

Query: 181 LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE 240
           LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE
Sbjct: 181 LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE 240

Query: 241 FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP 300
           FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP
Sbjct: 241 FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP 300

Query: 301 NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE 360
           NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE
Sbjct: 301 NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE 360

Query: 361 VKHLETTDAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSA 420
           VKHLETTDAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSA
Sbjct: 361 VKHLETTDAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSA 420

Query: 421 GCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIERRNSTDDNLNADPTSQLC 480
           GCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIERRNSTDDNLNADPTSQLC
Sbjct: 421 GCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIERRNSTDDNLNADPTSQLC 480

Query: 481 ITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYHAKALMEEMKSVGLTPNHI 540
           ITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYHAKALMEEMKSVGLTPNHI
Sbjct: 481 ITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYHAKALMEEMKSVGLTPNHI 540

Query: 541 SWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFEEM 600
           SWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFEEM
Sbjct: 541 SWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFEEM 600

Query: 601 KRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELIAEWCEG 660
           KRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELIAEWCEG
Sbjct: 601 KRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELIAEWCEG 660

Query: 661 VLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTESLAIDLQELTKVEARIVV 720
           VLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTESLAIDLQELTKVEARIVV
Sbjct: 661 VLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTESLAIDLQELTKVEARIVV 720

Query: 721 LAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVRDAITKLLQYELGLEVLPA 780
           LAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVRDAITKLLQYELGLEVLPA
Sbjct: 721 LAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVRDAITKLLQYELGLEVLPA 780

Query: 781 GPTTVPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRLKVTKKSLKDWLQRNRDII 840
           GPTT PDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRLKVTKKSLKDWLQRNRDII
Sbjct: 781 GPTTAPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRLKVTKKSLKDWLQRNRDII 840

Query: 841 EYRLSIPKNDSFC 853
           EYRLSIPKNDSFC
Sbjct: 841 EYRLSIPKNDSFC 853

[Close]
BLAST of Csor.00g033980 vs. ExPASy TrEMBL
Match: A0A6J1HHN3 (pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463609 PE=3 SV=1)

HSP 1 Score: 1663 bits (4306), Expect = 0.0
Identity = 852/871 (97.82%), Postives = 852/871 (97.82%), Query Frame = 0 

Query: 1   MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS 60
           MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS
Sbjct: 1   MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS 60

Query: 61  PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV 120
           PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV
Sbjct: 61  PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV 120

Query: 121 LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD 180
           LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD
Sbjct: 121 LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD 180

Query: 181 LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE 240
           LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE
Sbjct: 181 LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE 240

Query: 241 FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP 300
           FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP
Sbjct: 241 FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP 300

Query: 301 NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE 360
           NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE
Sbjct: 301 NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE 360

Query: 361 VKHLETT------------------DAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCA 420
           VKHLETT                  DAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCA
Sbjct: 361 VKHLETTGVLKLDVFTYSTIVKVFADAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCA 420

Query: 421 NSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIE 480
           NSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIE
Sbjct: 421 NSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIE 480

Query: 481 RRNSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYH 540
           RRNSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYH
Sbjct: 481 RRNSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYH 540

Query: 541 AKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIK 600
           AKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIK
Sbjct: 541 AKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIK 600

Query: 601 VCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSG 660
           VCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSG
Sbjct: 601 VCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSG 660

Query: 661 FKSDDHYLKELIAEWCEGVLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTE 720
           FKSDDHYLKELIAEWCEGVLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTE
Sbjct: 661 FKSDDHYLKELIAEWCEGVLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTE 720

Query: 721 SLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVR 780
           SLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVR
Sbjct: 721 SLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVR 780

Query: 781 DAITKLLQYELGLEVLPAGPTTVPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRL 840
           DAITKLLQYELGLEVLPAGPTT PDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRL
Sbjct: 781 DAITKLLQYELGLEVLPAGPTTAPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRL 840

Query: 841 KVTKKSLKDWLQRNRDIIEYRLSIPKNDSFC 853
           KVTKKSLKDWLQRNRDIIEYRLSIPKNDSFC
Sbjct: 841 KVTKKSLKDWLQRNRDIIEYRLSIPKNDSFC 871

[Close]
BLAST of Csor.00g033980 vs. ExPASy TrEMBL
Match: A0A6J1IAN7 (pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471192 PE=3 SV=1)

HSP 1 Score: 1608 bits (4165), Expect = 0.0
Identity = 820/843 (97.27%), Postives = 831/843 (98.58%), Query Frame = 0 

Query: 1   MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS 60
           MR LLILGSASSSSS   IAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS
Sbjct: 1   MRVLLILGSASSSSS---IAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS 60

Query: 61  PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV 120
           PLLSSVQWDIAGASSGGKTSLRHYADVASKLAE GKLDDFAMVVE+VVVAGVEPSQFAAV
Sbjct: 61  PLLSSVQWDIAGASSGGKTSLRHYADVASKLAECGKLDDFAMVVESVVVAGVEPSQFAAV 120

Query: 121 LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD 180
           LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD
Sbjct: 121 LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD 180

Query: 181 LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE 240
           LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVD+RNPK+AIRYASILPQADILFCTVINE
Sbjct: 181 LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDSRNPKMAIRYASILPQADILFCTVINE 240

Query: 241 FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP 300
           FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRN+YHQDLLSQNVTP
Sbjct: 241 FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNVYHQDLLSQNVTP 300

Query: 301 NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE 360
           NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE
Sbjct: 301 NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE 360

Query: 361 VKHLETTDAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSA 420
           VKHLETTDAKLWKMALRVKEDMQSAGV PNMVTWSSLISSCANSGLVELAI+LFEEMVSA
Sbjct: 361 VKHLETTDAKLWKMALRVKEDMQSAGVLPNMVTWSSLISSCANSGLVELAIELFEEMVSA 420

Query: 421 GCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIERRNSTDDNLNADPTSQLC 480
           GCEPNTQCCNILLHACVEARQFDRAFRLFRSW+EKELWDDIER+NSTDDNLNADPTSQLC
Sbjct: 421 GCEPNTQCCNILLHACVEARQFDRAFRLFRSWKEKELWDDIERKNSTDDNLNADPTSQLC 480

Query: 481 ITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYHAKALMEEMKSVGLTPNHI 540
           ITNMPNAQSHVHQIKFAGNF FKPTITTYNILMKACGTDYYHAKALMEEMKSVGLTPNHI
Sbjct: 481 ITNMPNAQSHVHQIKFAGNFTFKPTITTYNILMKACGTDYYHAKALMEEMKSVGLTPNHI 540

Query: 541 SWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFEEM 600
           SWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFEEM
Sbjct: 541 SWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFEEM 600

Query: 601 KRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELIAEWCEG 660
           KRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELIAEWCEG
Sbjct: 601 KRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELIAEWCEG 660

Query: 661 VLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTESLAIDLQELTKVEARIVV 720
           V+QNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSF ESLAIDLQ+LTKVEARIVV
Sbjct: 661 VIQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFIESLAIDLQDLTKVEARIVV 720

Query: 721 LAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVRDAITKLLQYELGLEVLPA 780
           LAVLRMIKENYALGESVKDDI I+LGVSKVEPDLV+QNFEVRDAITKLLQYELGLEVL A
Sbjct: 721 LAVLRMIKENYALGESVKDDIVIVLGVSKVEPDLVQQNFEVRDAITKLLQYELGLEVLTA 780

Query: 781 GPTTVPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRLKVTKKSLKDWLQRNRDII 840
           GPTTV DEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRLKVTKKSLKDWLQRNR II
Sbjct: 781 GPTTVLDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRLKVTKKSLKDWLQRNRGII 840

Query: 841 EYR 843
           EYR
Sbjct: 841 EYR 840

[Close]
BLAST of Csor.00g033980 vs. ExPASy TrEMBL
Match: A0A6J1I6K5 (pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471192 PE=3 SV=1)

HSP 1 Score: 1597 bits (4136), Expect = 0.0
Identity = 820/861 (95.24%), Postives = 831/861 (96.52%), Query Frame = 0 

Query: 1   MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS 60
           MR LLILGSASSSSS   IAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS
Sbjct: 1   MRVLLILGSASSSSS---IAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS 60

Query: 61  PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV 120
           PLLSSVQWDIAGASSGGKTSLRHYADVASKLAE GKLDDFAMVVE+VVVAGVEPSQFAAV
Sbjct: 61  PLLSSVQWDIAGASSGGKTSLRHYADVASKLAECGKLDDFAMVVESVVVAGVEPSQFAAV 120

Query: 121 LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD 180
           LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD
Sbjct: 121 LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD 180

Query: 181 LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE 240
           LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVD+RNPK+AIRYASILPQADILFCTVINE
Sbjct: 181 LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDSRNPKMAIRYASILPQADILFCTVINE 240

Query: 241 FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP 300
           FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRN+YHQDLLSQNVTP
Sbjct: 241 FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNVYHQDLLSQNVTP 300

Query: 301 NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE 360
           NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE
Sbjct: 301 NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE 360

Query: 361 VKHLETT------------------DAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCA 420
           VKHLETT                  DAKLWKMALRVKEDMQSAGV PNMVTWSSLISSCA
Sbjct: 361 VKHLETTGVLKLDVFTYSTIVKVFADAKLWKMALRVKEDMQSAGVLPNMVTWSSLISSCA 420

Query: 421 NSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIE 480
           NSGLVELAI+LFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSW+EKELWDDIE
Sbjct: 421 NSGLVELAIELFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWKEKELWDDIE 480

Query: 481 RRNSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYH 540
           R+NSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNF FKPTITTYNILMKACGTDYYH
Sbjct: 481 RKNSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNFTFKPTITTYNILMKACGTDYYH 540

Query: 541 AKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIK 600
           AKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIK
Sbjct: 541 AKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIK 600

Query: 601 VCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSG 660
           VCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSG
Sbjct: 601 VCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSG 660

Query: 661 FKSDDHYLKELIAEWCEGVLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTE 720
           FKSDDHYLKELIAEWCEGV+QNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSF E
Sbjct: 661 FKSDDHYLKELIAEWCEGVIQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFIE 720

Query: 721 SLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVR 780
           SLAIDLQ+LTKVEARIVVLAVLRMIKENYALGESVKDDI I+LGVSKVEPDLV+QNFEVR
Sbjct: 721 SLAIDLQDLTKVEARIVVLAVLRMIKENYALGESVKDDIVIVLGVSKVEPDLVQQNFEVR 780

Query: 781 DAITKLLQYELGLEVLPAGPTTVPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRL 840
           DAITKLLQYELGLEVL AGPTTV DEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRL
Sbjct: 781 DAITKLLQYELGLEVLTAGPTTVLDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRL 840

Query: 841 KVTKKSLKDWLQRNRDIIEYR 843
           KVTKKSLKDWLQRNR IIEYR
Sbjct: 841 KVTKKSLKDWLQRNRGIIEYR 858

[Close]
BLAST of Csor.00g033980 vs. ExPASy TrEMBL
Match: A0A6J1CPM4 (pentatricopeptide repeat-containing protein At5g02830, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013583 PE=3 SV=1)

HSP 1 Score: 1394 bits (3609), Expect = 0.0
Identity = 724/855 (84.68%), Postives = 767/855 (89.71%), Query Frame = 0 

Query: 1   MRGLLILGSASSSSSSSSIAGRCSRRPSHSKALNSSLSNVFPTGTHSPLSSRPSTIHSRS 60
           MR  LILGS     SS+SIAG    R SHSK   SSLSN+ PTG HSPLSSRPST+HSR 
Sbjct: 1   MRVFLILGS-----SSASIAGPRHHRHSHSKPPKSSLSNLSPTGKHSPLSSRPSTLHSRP 60

Query: 61  PLLSSVQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAV 120
           PLLSSVQWDIAGASSGG+T LRHYADVASKLAERGKL+DFAMVVE+VVVAGVEPS F AV
Sbjct: 61  PLLSSVQWDIAGASSGGRTPLRHYADVASKLAERGKLEDFAMVVESVVVAGVEPSHFTAV 120

Query: 121 LAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGD 180
           L VELVA GISRCLREG LW VVQVLRKVEELGISAVGLCD+SAVESL+R+CRR++KSG+
Sbjct: 121 LTVELVATGISRCLREGKLWTVVQVLRKVEELGISAVGLCDKSAVESLKRDCRRLAKSGE 180

Query: 181 LEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCTVINE 240
           LEELVEFMEVLSGFGFSIKE+MKPSEVIKLCVD RNPK+AIRYASILP ADILFCT INE
Sbjct: 181 LEELVEFMEVLSGFGFSIKELMKPSEVIKLCVDCRNPKMAIRYASILPHADILFCTTINE 240

Query: 241 FGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTP 300
           FGKKRDLKSAFMAY+ESKA+MNGPNMYIYR+IIDVCGLCGD+KKSRNIY QDL+SQNVTP
Sbjct: 241 FGKKRDLKSAFMAYSESKANMNGPNMYIYRTIIDVCGLCGDFKKSRNIY-QDLISQNVTP 300

Query: 301 NVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYRE 360
           N+YVFNSLMNVNAHDLNY FQLYKNMQNLGVPADMASYNI+LKACCLAGRVDLAQD+YRE
Sbjct: 301 NIYVFNSLMNVNAHDLNYTFQLYKNMQNLGVPADMASYNIVLKACCLAGRVDLAQDVYRE 360

Query: 361 VKHLETT------------------DAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCA 420
           VKHLETT                  DAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCA
Sbjct: 361 VKHLETTGVLKLDVFTYSTIVKVFADAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCA 420

Query: 421 NSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIE 480
           NSGLVELAIQLFEEM+  GCEPN QCCNILLHACVEARQFDRAFRLFRSWR KE+WDD+E
Sbjct: 421 NSGLVELAIQLFEEMILCGCEPNAQCCNILLHACVEARQFDRAFRLFRSWRAKEVWDDME 480

Query: 481 RRNSTDDNLNADPTSQLCITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYH 540
           R+NST+ NLNAD TSQLC TNM NA  H HQI F G+FAFKPTITTYNILMKACGTDYYH
Sbjct: 481 RKNSTNSNLNADLTSQLCTTNMTNAPFHAHQINFVGDFAFKPTITTYNILMKACGTDYYH 540

Query: 541 AKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIK 600
           AKALMEEM+SVGLTPNHISWSILIDICGGS DV+SAVQILTTMRMAGVDPDVVAYTTAIK
Sbjct: 541 AKALMEEMRSVGLTPNHISWSILIDICGGSHDVESAVQILTTMRMAGVDPDVVAYTTAIK 600

Query: 601 VCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSG 660
           VCV  KNW+LAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSL EVQQCLAIYQDMRKS 
Sbjct: 601 VCVEGKNWKLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLREVQQCLAIYQDMRKSR 660

Query: 661 FKSDDHYLKELIAEWCEGVLQNNNQQQEEATAPCNRTDIGKPRCLILEKVAEHLQKSFTE 720
           FKS+DHYLKELIAEWCEGV+QN++QQQ E   PC + DIGKPR LILEKVAEHLQKSFTE
Sbjct: 661 FKSNDHYLKELIAEWCEGVIQNDSQQQGEIN-PCKKIDIGKPRGLILEKVAEHLQKSFTE 720

Query: 721 SLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIILGVSKVEPDLVEQNFEVR 780
           SLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDI IIL VSKVE DLV+QNFEVR
Sbjct: 721 SLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDILIILEVSKVETDLVQQNFEVR 780

Query: 781 DAITKLLQYELGLEVLPAGPTTVPDEVAGSESSNMSLTKLNGIMGRNKYTTRKPAAVQRL 837
           DAITKLLQ ELGLEVLPA PT    +V  SESSNMS TKL GI+GRNKY+TR+PA VQRL
Sbjct: 781 DAITKLLQDELGLEVLPARPTVALHKVTDSESSNMSNTKLKGIIGRNKYSTRRPADVQRL 840

[Close]
BLAST of Csor.00g033980 vs. TAIR 10
Match: AT5G02830.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 790.8 bits (2041), Expect = 1.1e-228
Identity = 430/865 (49.71%), Postives = 592/865 (68.44%), Query Frame = 0 

Query: 4   LLILGSASSSSSSSSIAGRC---SRRPSHSKALNSSLSNVFPT--GTHSPLSSRPSTIHS 63
           +++ GS+S+ ++      RC   +   +     NSS + + P+    HSP  +  S  HS
Sbjct: 5   VIVFGSSSAITNPHHHHRRCYATAPESNRKTKSNSSFTKLLPSLPQQHSPSPASVSATHS 64

Query: 64  RSPLLSS-VQWDIAGASSGGKTSLRHYADVASKLAERGKLDDFAMVVENVVV-AGVEPSQ 123
            S   S+ V+W   G       SL +YAD ASKLAE G+++D A++ E +   +G   ++
Sbjct: 65  LSSHFSNVVRWIPDG-------SLEYYADFASKLAEDGRIEDVALIAETLAAESGANVAR 124

Query: 124 FAAVLAVELVAKGISRCLREGNLWNVVQVLRKVEELGISAVGLCDESAVESLRRECRRIS 183
           FA+++  +L++KGIS  LR+G + +VV  L+++E++GI+ + L D+S+V+ +R++ R ++
Sbjct: 125 FASMVDYDLLSKGISSNLRQGKIESVVYTLKRIEKVGIAPLDLVDDSSVKLMRKQFRAMA 184

Query: 184 KSGDLEELVEFMEVLSGFGFSIKEMMKPSEVIKLCVDARNPKIAIRYASILPQADILFCT 243
            S  +E+ ++ ME+L+G GF IKE++ P +V+K CV+  NP++AIRYA +LP  ++L C 
Sbjct: 185 NSVQVEKAIDLMEILAGLGFKIKELVDPFDVVKSCVEISNPQLAIRYACLLPHTELLLCR 244

Query: 244 VINEFGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQ 303
           +I+ FGKK D+ S   AY   K  ++ PNMYI R++IDVCGLCGDY KSR IY +DLL +
Sbjct: 245 IIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIY-EDLLKE 304

Query: 304 NVTPNVYVFNSLMNVNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQD 363
           N+ PN+YV NSLMNVN+HDL Y  ++YKNMQ L V ADM SYNILLK CCLAGRVDLAQD
Sbjct: 305 NIKPNIYVINSLMNVNSHDLGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQD 364

Query: 364 IYREVKHLETT------------------DAKLWKMALRVKEDMQSAGVSPNMVTWSSLI 423
           IY+E K +E++                  DAK+WK AL+VK+DM+S GV+PN  TWSSLI
Sbjct: 365 IYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLI 424

Query: 424 SSCANSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELW 483
           S+CAN+GLVE A  LFEEM+++GCEPN+QC NILLHACVEA Q+DRAFRLF+SW+   + 
Sbjct: 425 SACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVN 484

Query: 484 DDIERRNSTDDNLNADPTSQLCIT------NMPNAQSHVHQIKFAGNFAFKPTITTYNIL 543
           + +      DD ++   TS   I       ++ N  S+   I+ +  F FKPT  TYNIL
Sbjct: 485 ESL----YADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNIL 544

Query: 544 MKACGTDYYHAKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTMRMAGVDP 603
           +KACGTDYY  K LM+EMKS+GL+PN I+WS LID+CGGS DV+ AV+IL TM  AG  P
Sbjct: 545 LKACGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRP 604

Query: 604 DVVAYTTAIKVCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCL 663
           DVVAYTTAIK+C   K  +LAFSLFEEM+R++I+PN VTY+TLL+ARS YGSL EV+QCL
Sbjct: 605 DVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQCL 664

Query: 664 AIYQDMRKSGFKSDDHYLKELIAEWCEGVLQNNNQQQEEATAPCNRTDIGKPRCLILEKV 723
           AIYQDMR +G+K +DH+LKELI EWCEGV+Q N Q Q++ +      + G+P  L++EKV
Sbjct: 665 AIYQDMRNAGYKPNDHFLKELIEEWCEGVIQENGQSQDKISDQ-EGDNAGRPVSLLIEKV 724

Query: 724 AEHLQKSFTESLAIDLQELTKVEARIVVLAVLRMIKENYALGESVKDDIFIILGVSKVEP 783
           A H+Q+    +LAIDLQ LTK+EAR+VVLAVLRMIKE+Y  G+ V DD+ II+G  +   
Sbjct: 725 ATHMQERTAGNLAIDLQGLTKIEARLVVLAVLRMIKEDYMRGDVVIDDVLIIIGTDEANT 784

Query: 784 DLVEQNFEVRDAITKLLQYELGLEVLPAGPTTVPDEVAGSESSNMSLTKLNGIMGRNKYT 838
              +Q   V++A+ KLL+ EL L VLPAG   +  +    + ++   TK    +     +
Sbjct: 785 VSGKQEITVQEALVKLLRDELSLVVLPAGQRNIIQDAHCVDDADQENTKSFVSIS----S 844

[Close]
BLAST of Csor.00g033980 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 117.5 bits (293), Expect = 5.4e-26
Identity = 125/603 (20.73%), Postives = 265/603 (43.95%), Query Frame = 0 

Query: 84  YADVASKLAERGKLDDFAMVVENVVVAGVEPSQFAAVLAVELVAKGISRCLREGNLWN-V 143
           Y  + S  A  G+  +   V + +   G +P+     + + +  K        G  WN +
Sbjct: 211 YTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGK-------MGTPWNKI 270

Query: 144 VQVLRKVEELGISAVGLCDESAVESLRRECRRISKSGDL-EELVEFMEVLSGFGFSIKEM 203
             ++ K++  GI+     D     +L   C+R    G L +E  +  E +   GFS  + 
Sbjct: 271 TSLVEKMKSDGIAP----DAYTYNTLITCCKR----GSLHQEAAQVFEEMKAAGFSY-DK 330

Query: 204 MKPSEVIKLCVDARNPKIAIRYASIL-----PQADILFCTVINEFGKKRDLKSAFMAYTE 263
           +  + ++ +   +  PK A++  + +       + + + ++I+ + +   L  A     +
Sbjct: 331 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQ 390

Query: 264 SKAHMNGPNMYIYRSIIDVCGLCGDYKKSRNIYHQDLLSQNVTPNVYVFNSLMNV--NAH 323
                  P+++ Y +++      G  + + +I+ +++ +    PN+  FN+ + +  N  
Sbjct: 391 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF-EEMRNAGCKPNICTFNAFIKMYGNRG 450

Query: 324 DLNYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYREVKHL------ETTD 383
               + +++  +   G+  D+ ++N LL      G       +++E+K        ET +
Sbjct: 451 KFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFN 510

Query: 384 AKL--------WKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSA 443
             +        ++ A+ V   M  AGV+P++ T+++++++ A  G+ E + ++  EM   
Sbjct: 511 TLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDG 570

Query: 444 GCEPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIERRNSTDDNLNADPTSQLC 503
            C+PN      LLHA    ++      L  S  E+     IE R      L        C
Sbjct: 571 RCKPNELTYCSLLHAYANGKEIG----LMHSLAEEVYSGVIEPRAVLLKTLVL--VCSKC 630

Query: 504 ITNMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACGTDYYHAKA--LMEEMKSVGLTPN 563
              +P A+    ++K  G   F P ITT N ++   G     AKA  +++ MK  G TP+
Sbjct: 631 -DLLPEAERAFSELKERG---FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 690

Query: 564 HISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRL--AFSL 623
             +++ L+ +   S D   + +IL  +   G+ PD+++Y T I     C+N R+  A  +
Sbjct: 691 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAY--CRNTRMRDASRI 750

Query: 624 FEEMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELIAE 660
           F EM+   I P+++TY+T +    +Y +    ++ + + + M K G + + +    ++  
Sbjct: 751 FSEMRNSGIVPDVITYNTFI---GSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDG 781

[Close]
BLAST of Csor.00g033980 vs. TAIR 10
Match: AT4G19440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 114.4 bits (285), Expect = 4.5e-25
Identity = 106/476 (22.27%), Postives = 197/476 (41.39%), Query Frame = 0 

Query: 233 LFCTVINEFGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDY---------- 292
           LF T IN F K   ++ A   +++ +     PN+  + ++ID  G+CG Y          
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321

Query: 293 ----------------------KKSRNIYH--QDLLSQNVTPNVYVFNSLMN--VNAHDL 352
                                 K+  + Y   +++  +   PNV V+N+L++  + A  L
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381

Query: 353 NYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYREVKHLE----------- 412
           N   ++   M + G+    ++YN L+K  C  G+ D A+ + +E+  +            
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441

Query: 413 ---TTDAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSAGC 472
                   ++  ALR   +M    +SP     ++LIS     G    A++L+ + ++ G 
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501

Query: 473 EPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIERRNSTDDNLNADPTSQLCIT 532
             +T+  N LLH   EA + D AFR+ +         +I  R    D ++ +     C  
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQK---------EILGRGCVMDRVSYNTLISGCCG 561

Query: 533 NMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACG----TDYYHAKALMEEMKSVGLTPN 592
                ++ +   +       KP   TY+IL+  CG         A    ++ K  G+ P+
Sbjct: 562 KKKLDEAFMFLDEMVKR-GLKPDNYTYSILI--CGLFNMNKVEEAIQFWDDCKRNGMLPD 621

Query: 593 HISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFE 652
             ++S++ID C  +   +   +    M    V P+ V Y   I+         +A  L E
Sbjct: 622 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 681

Query: 653 EMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELI 655
           +MK   I PN  TY++L++  S    +  V++   ++++MR  G + +  +   LI
Sbjct: 682 DMKHKGISPNSATYTSLIKGMSI---ISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722

[Close]
BLAST of Csor.00g033980 vs. TAIR 10
Match: AT4G19440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 114.4 bits (285), Expect = 4.5e-25
Identity = 106/476 (22.27%), Postives = 197/476 (41.39%), Query Frame = 0 

Query: 233 LFCTVINEFGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIIDVCGLCGDY---------- 292
           LF T IN F K   ++ A   +++ +     PN+  + ++ID  G+CG Y          
Sbjct: 262 LFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321

Query: 293 ----------------------KKSRNIYH--QDLLSQNVTPNVYVFNSLMN--VNAHDL 352
                                 K+  + Y   +++  +   PNV V+N+L++  + A  L
Sbjct: 322 VERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL 381

Query: 353 NYIFQLYKNMQNLGVPADMASYNILLKACCLAGRVDLAQDIYREVKHLE----------- 412
           N   ++   M + G+    ++YN L+K  C  G+ D A+ + +E+  +            
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441

Query: 413 ---TTDAKLWKMALRVKEDMQSAGVSPNMVTWSSLISSCANSGLVELAIQLFEEMVSAGC 472
                   ++  ALR   +M    +SP     ++LIS     G    A++L+ + ++ G 
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501

Query: 473 EPNTQCCNILLHACVEARQFDRAFRLFRSWREKELWDDIERRNSTDDNLNADPTSQLCIT 532
             +T+  N LLH   EA + D AFR+ +         +I  R    D ++ +     C  
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQK---------EILGRGCVMDRVSYNTLISGCCG 561

Query: 533 NMPNAQSHVHQIKFAGNFAFKPTITTYNILMKACG----TDYYHAKALMEEMKSVGLTPN 592
                ++ +   +       KP   TY+IL+  CG         A    ++ K  G+ P+
Sbjct: 562 KKKLDEAFMFLDEMVKR-GLKPDNYTYSILI--CGLFNMNKVEEAIQFWDDCKRNGMLPD 621

Query: 593 HISWSILIDICGGSRDVKSAVQILTTMRMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFE 652
             ++S++ID C  +   +   +    M    V P+ V Y   I+         +A  L E
Sbjct: 622 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 681

Query: 653 EMKRFEIQPNLVTYSTLLRARSTYGSLHEVQQCLAIYQDMRKSGFKSDDHYLKELI 655
           +MK   I PN  TY++L++  S    +  V++   ++++MR  G + +  +   LI
Sbjct: 682 DMKHKGISPNSATYTSLIKGMSI---ISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722

[Close]
BLAST of Csor.00g033980 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 8.6e-24
Identity = 104/441 (23.58%), Postives = 188/441 (42.63%), Query Frame = 0 

Query: 232 ILFCTVINEFGKKRDLKSAFMAYTESKAHMNGPNMYIYRSIID-VCGLCGDYKKSRNIYH 291
           I + TV+N + +  +L   +      K     PN YIY SII  +C +C    ++   + 
Sbjct: 282 ISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC-KLAEAEEAF- 341

Query: 292 QDLLSQNVTPNVYVFNSLMN--VNAHDLNYIFQLYKNMQNLGVPADMASYNILLKACCLA 351
            +++ Q + P+  V+ +L++      D+    + +  M +  +  D+ +Y  ++   C  
Sbjct: 342 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 401

Query: 352 GRVDLAQDIYREV--KHLETTD------------AKLWKMALRVKEDMQSAGVSPNMVTW 411
           G +  A  ++ E+  K LE               A   K A RV   M  AG SPN+VT+
Sbjct: 402 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 461

Query: 412 SSLISSCANSGLVELAIQLFEEMVSAGCEPNTQCCNILLHACVEARQFDRAFRLFRSWRE 471
           ++LI      G ++ A +L  EM   G +PN    N +++   ++   + A +L   +  
Sbjct: 462 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 521

Query: 472 KELWDDIERRNSTDDNLNADPTSQLCITN-------MPNAQSHVHQIKFAGNFAFKPTIT 531
                           LNAD  +   + +       M  AQ  + ++   G    +PTI 
Sbjct: 522 A--------------GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG---LQPTIV 581

Query: 532 TYNILMKACGTD--YYHAKALMEEMKSVGLTPNHISWSILIDICGGSRDVKSAVQILTTM 591
           T+N+LM            + L+  M + G+ PN  +++ L+       ++K+A  I   M
Sbjct: 582 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 641

Query: 592 RMAGVDPDVVAYTTAIKVCVGCKNWRLAFSLFEEMKRFEIQPNLVTYSTLLRARSTYGSL 647
              GV PD   Y   +K     +N + A+ LF+EMK      ++ TYS L++        
Sbjct: 642 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKF 700

The following BLAST results are available for this feature:
BLAST of Csor.00g033980 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8GYL71.5e-22749.71Pentatricopeptide repeat-containing protein At5g02830, chloroplastic OS=Arabidop... [more]
Q9LYZ97.5e-2520.73Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... [more]
Q940A66.4e-2422.27Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidop... [more]
B8Y6I07.1e-2323.68Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=457... [more]
Q0WVK71.2e-2223.58Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
BLAST of Csor.00g033980 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6595270.10.0100.00Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_022963394.10.099.88pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X2 ... [more]
XP_022963393.10.097.82pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X1 ... [more]
KAG7027282.10.097.70Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_023517056.10.096.40pentatricopeptide repeat-containing protein At5g02830, chloroplastic [Cucurbita ... [more]
BLAST of Csor.00g033980 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HJZ60.099.88pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X2 ... [more]
A0A6J1HHN30.097.82pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X1 ... [more]
A0A6J1IAN70.097.27pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X2 ... [more]
A0A6J1I6K50.095.24pentatricopeptide repeat-containing protein At5g02830, chloroplastic isoform X1 ... [more]
A0A6J1CPM40.084.68pentatricopeptide repeat-containing protein At5g02830, chloroplastic OS=Momordic... [more]
BLAST of Csor.00g033980 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G02830.11.1e-22849.71Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G02860.15.4e-2620.73Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G19440.14.5e-2522.27Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G19440.24.5e-2522.27Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G05670.18.6e-2423.58Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 366..466
e-value: 3.5E-24
score: 87.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 482..705
e-value: 8.9E-36
score: 125.8
coord: 231..365
e-value: 8.1E-22
score: 80.0
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 516..652
e-value: 1.2E-12
score: 47.6
coord: 237..358
e-value: 2.3E-6
score: 27.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 389..436
e-value: 3.2E-12
score: 46.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 428..455
e-value: 1.6E-4
score: 19.6
coord: 392..426
e-value: 3.9E-10
score: 37.3
coord: 540..574
e-value: 0.0022
score: 16.0
coord: 337..361
e-value: 0.0016
score: 16.5
coord: 575..608
e-value: 1.2E-5
score: 23.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 334..368
score: 9.503505
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 390..424
score: 13.361882
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 538..572
score: 9.437737
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 573..607
score: 10.621557
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availablePANTHERPTHR47942TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 66..833
NoneNo IPR availablePANTHERPTHR47942:SF50OS03G0284900 PROTEINcoord: 66..833

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g033980.m01Csor.00g033980.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding