Csor.00g033910 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g033910
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	DNA-binding protein S1FA-like
Location	Csor_Chr07: 4629100 .. 4631855 (+)
RNA-Seq Expression	Csor.00g033910
Synteny	Csor.00g033910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGACGACTTCGATTTCGGTGACAAGGTTCCGCCGGCCGTCAATCGCATGGTACTACTATCCCGATGTCATTTCTTTTCTTCTCTCTACTTTGCCGCCTAATCTAAGATCTTTGTTAATGCAGCAGCTCCTCCTTTCGAGATTTTGATTTGCAGATGCTTCTTTGTGTTTACTTTGATACTTTACCTATATTCACCGAGGTTTTCTGTTCGGATTTGATCTCATTCTTGGAAATTCGTTCCTGAGGTCTGATCGTCTTTGTAAATAATGTCGTTGATTTTTTTGAGGGATCTGCTCCGAGTATCCTTATAGATTTGTTTGCAAACGTGGAATTTCTTTTTCAGTTTTGTTCATGCAACTGAATCGAGGAAGATGAGAATGCATGATTTCAAAAACTACACTTCTTTTTGCAATTTCTTTGAAATTTCAGGATGCTACATGAATTTGTTAATTTGGTCCTACTTCTATAACCGAACTTAAAATTGGAGGGTTGTGGAATTGTTCCTTTTCAGTTGACAAGAATAATTGTCCTGACCTGTTTGATATTGTTAAATTAGAGAATGTTCCATGCATCTCTGATTCTGATGTGGTATCCTCAGCATCTTTCATTGCTAATAATCAAATTAAAGAGTAATAGGCTACAATAGATCTCCTCCTCGTGCTTTTGATCTATCTAACTCGAGTTTTGAAGCCAATTTACCTGTAACCTATGAGTATATAGTGGATATTCTTCGTATTTAAGTGGAACAATCATGGAAAAGATCCTCTTAATCTGATACATTCACAAGTCAGAAATGGGACATTATCCATCATAACTGGGCTCGAACACTTTTTGTTAATGGCCTTTTTGATGAACATTTTTGTTTTTGCTTTCCTGATTTTGAAAATTATGCTTATTGTTTACAAGTTGTTCACCCATTTCAAAACACAGATGAATTCTAATCTAAAATTGGCCACGGTGCACAGGGGAACGTGATTAGAGAGGCAGATGCAAGAGGATTCAATCCAGGGCTGATTGTGCTGCTTGTAGTGGGGGTGCTGCTATTGGCTTTCCTTGCTGGGAATTACGCTCTGTACGTGTATGCGCAGAAGACACTCCCTCCAAAAAGGAAGAAACCAGTTTCAAAGAAGAAGATGAAGAGGGAGAGATTGAAGCAAGGTATTTCGGCTCCTGGAGAGTAATAGCCTAGTAGTTGTTGTTGTTGTTGTAGTAGTAGACGTTGTGGTCCTGTTTTTATTATTTTTTTTTTCTTTTCTTGTTTGAACTAACAAGTTCTTCCCGTTGTTTTGTTTATGCTGTTCAAATCTAAACATCCCAACTAGAAGTTTATCGTCCCTTGCATCTGTAGAAATGAGAAATATGAATAAGAACATAGTTTATATGATATGTTATGCTGTTCTATCTTTCTAAATTAGGAGGATTGAGAGAGATCCATTGGATAATAAAATAATTAGGAGGATTGAGAGCGATCCACTAGATATTTGGGCGCTTGTCTATTCTAGTGTTGATTTTATATTCTTTTGTATTCGGTGTTCATTTTTCCGTTTGTAAATAACTTGAAATATCTTTTTTCTCCTTTGTAAATAACTTGGAATGTCTTTTTTTTCATTTGTAAATAACTTGGAATGTCTTTTTTCCCCGTTTGTAAATAACTTGAAATTTCTTTTTTCCCGTTTGTAAATAACTTGGAATTTCTTTTTTCCCGTTTGTAAATAACTTGGAATGTCTTTTTTCCGTTTGTAAATAACTTGGAATGTCTTTTTTTCGTTTGTAAATAACTTGGAATGTCTTTTTTCCCGTTTGTAAATAACTTGGAATGTCTTCTTTCCGTTTGTAAATAACTTGGAATGTCTTTTTTCCCGTTTGTAAATAACTTGGAATGTCTTTTTTCCGTTTGTAAATAACTTGGAATGTCTTTTTTCCCGTTTGTAAATAACTTGGAATGTCTTTTTTCCCGTTTGTAAATAACTTGGAATATCTTTTTTCCGTTTGTAAATAACTTGGAATGTCTGACACTAGTGTTGCATGTCGGCATGTCTTTTAAACCAAGCGAAAATTTACCATATTTTCTATATTTTTAATGTTTTGTTTCATTTTAATTCTGTTTTGTTTGGGCTTATTTCGAATTTCGTGGTCTGATTTCTCGTAAAGTTGTGACATTTGTCTTTTTAACATATATATATATATATATATATATATATATATATATATATATATTTACACACATGGAGAATAGATTTTGAGGATGAAATTAAATACTCTATGTTCTATATGCTCACAACGAATAATAAGAGGCTCGAAACCCTGAAAATCATAAAACAAGGTTTCAATTACCTATCTTTTCATTATGTATTGTCGAGAATTTTCTTTTAAGTCAGTTCTTAATAAACTAGTTCGGTTTAAGAAAAAACAATATTTCGGACCTCAATAGTTAATATCTTCTTCTATCTTCACCAAAGTAATCTCCCTTCATCTTCACCTCTTATAAAGCCACCATTACTAAAAAAGAACGAAACATTTGACCATAAAGTATAGTTTTAAATTTATGAGTTCAAATGATAAAAGAAACATACAAATCGAAACATTCATCCTCACCAATATTTTCAACATACATATTCTATGCATAAAAGAACAGTATATTATCCACAAATATGACATGCCGTCTCATTCATACAAAACCTCGTCACTATATATTTTCTTTTCACTTGTATAGTTTCATGCAGATTCAGCAGAAACGCACCAACCACTGTAA

mRNA sequence

ATGGAAGACGACTTCGATTTCGGTGACAAGGTTCCGCCGGCCGTCAATCGCATGGGGAACGTGATTAGAGAGGCAGATGCAAGAGGATTCAATCCAGGGCTGATTGTGCTGCTTGTAGTGGGGGTGCTGCTATTGGCTTTCCTTGCTGGGAATTACGCTCTGTACGTGTATGCGCAGAAGACACTCCCTCCAAAAAGGAAGAAACCAGTTTCAAAGAAGAAGATGAAGAGGGAGAGATTGAAGCAAGATTCAGCAGAAACGCACCAACCACTGTAA

Coding sequence (CDS)

ATGGAAGACGACTTCGATTTCGGTGACAAGGTTCCGCCGGCCGTCAATCGCATGGGGAACGTGATTAGAGAGGCAGATGCAAGAGGATTCAATCCAGGGCTGATTGTGCTGCTTGTAGTGGGGGTGCTGCTATTGGCTTTCCTTGCTGGGAATTACGCTCTGTACGTGTATGCGCAGAAGACACTCCCTCCAAAAAGGAAGAAACCAGTTTCAAAGAAGAAGATGAAGAGGGAGAGATTGAAGCAAGATTCAGCAGAAACGCACCAACCACTGTAA

Protein sequence

MEDDFDFGDKVPPAVNRMGNVIREADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQKTLPPKRKKPVSKKKMKRERLKQDSAETHQPL

Homology

[Close]

BLAST of Csor.00g033910 vs. ExPASy Swiss-Prot
Match: P42552 (DNA-binding protein S1FA OS=Spinacia oleracea OX=3562 GN=S1FA PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 6.2e-18
Identity = 46/64 (71.88%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 22 IREADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQKTLPPKRKKPVSKKKMKRERLK 81
          + E +A+G NPGLIVLLV+G LLL FL GN+ LY YAQK LPPK+KKP+SKKKMKRERLK
Sbjct: 3  VNEVEAKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPKKKKPISKKKMKRERLK 62

Query: 82 QDSA 86
          Q  A
Sbjct: 63 QGVA 66

[Close]

BLAST of Csor.00g033910 vs. ExPASy Swiss-Prot
Match: Q7XLX6 (DNA-binding protein S1FA2 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA2 PE=3 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 6.8e-17
Identity = 45/63 (71.43%), Postives = 52/63 (82.54%), Query Frame = 0


Query: 20 NVIREADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQKTLPPKRKKPVSKKKMKRER 79
          NV+ E   +G NPG+IVL+VV   LL F  GNYALYVYAQKTLPP++KKPVSKKKMKRE+
Sbjct: 11 NVVIEEVNKGLNPGMIVLIVVATFLLLFFVGNYALYVYAQKTLPPRKKKPVSKKKMKREK 70

Query: 80 LKQ 83
          LKQ
Sbjct: 71 LKQ 73

[Close]

BLAST of Csor.00g033910 vs. ExPASy Swiss-Prot
Match: P42553 (DNA-binding protein S1FA1 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA1 PE=3 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.6e-16
Identity = 44/67 (65.67%), Postives = 54/67 (80.60%), Query Frame = 0


Query: 16 NRMGNVIREADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQKTLPPKRKKPVSKKKM 75
          ++  N+I E   +G NPG IVLLVV  LL+ F  GNYALY+YAQKTLPP++KKPVSKKK+
Sbjct: 3  DQSNNMIIEEVNKGLNPGTIVLLVVATLLILFFVGNYALYMYAQKTLPPRKKKPVSKKKL 62

Query: 76 KRERLKQ 83
          KRE+LKQ
Sbjct: 63 KREKLKQ 69

[Close]

BLAST of Csor.00g033910 vs. ExPASy Swiss-Prot
Match: P42551 (DNA-binding protein S1FA1 OS=Arabidopsis thaliana OX=3702 GN=S1FA1 PE=3 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 9.9e-16
Identity = 44/58 (75.86%), Postives = 50/58 (86.21%), Query Frame = 0


Query: 25 ADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQKTLPPKRKKPVSKKKMKRERLKQ 83
          A+A+G NPGLIVLLVVG  LL FL  NY LYVYAQK LPP++KKPVSKKK+KRE+LKQ
Sbjct: 12 AEAKGLNPGLIVLLVVGGPLLVFLIANYVLYVYAQKNLPPRKKKPVSKKKLKREKLKQ 69

[Close]

BLAST of Csor.00g033910 vs. ExPASy Swiss-Prot
Match: Q93VI0 (DNA-binding protein S1FA3 OS=Arabidopsis thaliana OX=3702 GN=S1FA3 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.7e-15
Identity = 40/57 (70.18%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 26 DARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQKTLPPKRKKPVSKKKMKRERLKQ 83
          +++G NPGLIVLLV+G LLL FL GN+ LY YAQK LPP++KKPVSKKKMK+E++KQ
Sbjct: 10 ESKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPRKKKPVSKKKMKKEKMKQ 66

[Close]

BLAST of Csor.00g033910 vs. NCBI nr
Match: KAG6595263.1 (DNA-binding protein S1FA2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 174 bits (441), Expect = 1.25e-54
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0


Query: 1  MEDDFDFGDKVPPAVNRMGNVIREADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQK 60
          MEDDFDFGDKVPPAVNRMGNVIREADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQK
Sbjct: 1  MEDDFDFGDKVPPAVNRMGNVIREADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQK 60

Query: 61 TLPPKRKKPVSKKKMKRERLKQDSAETHQPL 91
          TLPPKRKKPVSKKKMKRERLKQDSAETHQPL
Sbjct: 61 TLPPKRKKPVSKKKMKRERLKQDSAETHQPL 91

[Close]

BLAST of Csor.00g033910 vs. NCBI nr
Match: XP_022962636.1 (DNA-binding protein S1FA-like [Cucurbita moschata] >XP_023517292.1 DNA-binding protein S1FA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 153 bits (387), Expect = 2.04e-46
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 1  MEDDFDFGDKVPPAVNRMGNVIREADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQK 60
          MEDDFDFGDKVPPAVNRMGNVIREADARGFNPGLIVLLVVG LLLAFLAGNYALYVYAQK
Sbjct: 1  MEDDFDFGDKVPPAVNRMGNVIREADARGFNPGLIVLLVVGGLLLAFLAGNYALYVYAQK 60

Query: 61 TLPPKRKKPVSKKKMKRERLKQ 82
          TLPPKRKKPVSKKKMKRERLKQ
Sbjct: 61 TLPPKRKKPVSKKKMKRERLKQ 82

[Close]

BLAST of Csor.00g033910 vs. NCBI nr
Match: XP_038881351.1 (DNA-binding protein S1FA-like [Benincasa hispida])

HSP 1 Score: 150 bits (378), Expect = 4.81e-45
Identity = 78/82 (95.12%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 1  MEDDFDFGDKVPPAVNRMGNVIREADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQK 60
          MEDDFDFGDKVPPAVNRMGNVIR+ADARGFNPGLIVLLVVG LLLAFLAGNYALY+YAQK
Sbjct: 1  MEDDFDFGDKVPPAVNRMGNVIRDADARGFNPGLIVLLVVGGLLLAFLAGNYALYMYAQK 60

Query: 61 TLPPKRKKPVSKKKMKRERLKQ 82
          TLPPK+KKPVSKKKMKRERLKQ
Sbjct: 61 TLPPKKKKPVSKKKMKRERLKQ 82

[Close]

BLAST of Csor.00g033910 vs. NCBI nr
Match: XP_022972581.1 (DNA-binding protein S1FA-like [Cucurbita maxima])

HSP 1 Score: 146 bits (368), Expect = 1.61e-43
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  MEDDFDFGDKVPPAVNRMGNVIREADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQK 60
          MEDDFDFGDKVPPAVNRMGNVIR++DARGFNPGLIVLLVVG LLLAFLAGNYALYVYAQ 
Sbjct: 1  MEDDFDFGDKVPPAVNRMGNVIRDSDARGFNPGLIVLLVVGGLLLAFLAGNYALYVYAQN 60

Query: 61 TLPPKRKKPVSKKKMKRERLKQ 82
          TLP KRKKPVSKKKMKRERLKQ
Sbjct: 61 TLPQKRKKPVSKKKMKRERLKQ 82

[Close]

BLAST of Csor.00g033910 vs. NCBI nr
Match: XP_004143239.1 (DNA-binding protein S1FA [Cucumis sativus] >KGN48135.1 hypothetical protein Csa_003029 [Cucumis sativus])

HSP 1 Score: 144 bits (362), Expect = 1.33e-42
Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1  MEDDFDFGDKVPPAVNRMGNVIREADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQK 60
          MEDDFDFGDKVPPAVNRMGNVIR+ +ARGFNPGLIVLLVVG LL AFL GNYALY+YAQK
Sbjct: 1  MEDDFDFGDKVPPAVNRMGNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQK 60

Query: 61 TLPPKRKKPVSKKKMKRERLKQ 82
          TLPPK+KKPVSKKKMKRERLKQ
Sbjct: 61 TLPPKKKKPVSKKKMKRERLKQ 82

[Close]

BLAST of Csor.00g033910 vs. ExPASy TrEMBL
Match: A0A6J1HDT2 (DNA-binding protein S1FA-like OS=Cucurbita moschata OX=3662 GN=LOC111463054 PE=3 SV=1)

HSP 1 Score: 153 bits (387), Expect = 9.87e-47
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 1  MEDDFDFGDKVPPAVNRMGNVIREADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQK 60
          MEDDFDFGDKVPPAVNRMGNVIREADARGFNPGLIVLLVVG LLLAFLAGNYALYVYAQK
Sbjct: 1  MEDDFDFGDKVPPAVNRMGNVIREADARGFNPGLIVLLVVGGLLLAFLAGNYALYVYAQK 60

Query: 61 TLPPKRKKPVSKKKMKRERLKQ 82
          TLPPKRKKPVSKKKMKRERLKQ
Sbjct: 61 TLPPKRKKPVSKKKMKRERLKQ 82

[Close]

BLAST of Csor.00g033910 vs. ExPASy TrEMBL
Match: A0A6J1I6D0 (DNA-binding protein S1FA-like OS=Cucurbita maxima OX=3661 GN=LOC111471126 PE=3 SV=1)

HSP 1 Score: 146 bits (368), Expect = 7.81e-44
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  MEDDFDFGDKVPPAVNRMGNVIREADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQK 60
          MEDDFDFGDKVPPAVNRMGNVIR++DARGFNPGLIVLLVVG LLLAFLAGNYALYVYAQ 
Sbjct: 1  MEDDFDFGDKVPPAVNRMGNVIRDSDARGFNPGLIVLLVVGGLLLAFLAGNYALYVYAQN 60

Query: 61 TLPPKRKKPVSKKKMKRERLKQ 82
          TLP KRKKPVSKKKMKRERLKQ
Sbjct: 61 TLPQKRKKPVSKKKMKRERLKQ 82

[Close]

BLAST of Csor.00g033910 vs. ExPASy TrEMBL
Match: A0A0A0KEM3 (DNA-binding protein S1FA OS=Cucumis sativus OX=3659 GN=Csa_6G445000 PE=3 SV=1)

HSP 1 Score: 144 bits (362), Expect = 6.42e-43
Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 1  MEDDFDFGDKVPPAVNRMGNVIREADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQK 60
          MEDDFDFGDKVPPAVNRMGNVIR+ +ARGFNPGLIVLLVVG LL AFL GNYALY+YAQK
Sbjct: 1  MEDDFDFGDKVPPAVNRMGNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQK 60

Query: 61 TLPPKRKKPVSKKKMKRERLKQ 82
          TLPPK+KKPVSKKKMKRERLKQ
Sbjct: 61 TLPPKKKKPVSKKKMKRERLKQ 82

[Close]

BLAST of Csor.00g033910 vs. ExPASy TrEMBL
Match: A0A5A7TZ88 (DNA-binding protein S1FA-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00690 PE=3 SV=1)

HSP 1 Score: 140 bits (354), Expect = 1.07e-41
Identity = 73/82 (89.02%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 1  MEDDFDFGDKVPPAVNRMGNVIREADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQK 60
          MEDDFDFGDKVPPAVNRM NVIR+ +ARGFNPGLIVLLVVG LL AFL GNYALY+YAQK
Sbjct: 1  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQK 60

Query: 61 TLPPKRKKPVSKKKMKRERLKQ 82
          TLPPK+KKPVSKKKMKRERLKQ
Sbjct: 61 TLPPKKKKPVSKKKMKRERLKQ 82

[Close]

BLAST of Csor.00g033910 vs. ExPASy TrEMBL
Match: A0A1S3BLN5 (DNA-binding protein S1FA-like OS=Cucumis melo OX=3656 GN=LOC103491199 PE=3 SV=1)

HSP 1 Score: 140 bits (354), Expect = 1.07e-41
Identity = 73/82 (89.02%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 1  MEDDFDFGDKVPPAVNRMGNVIREADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQK 60
          MEDDFDFGDKVPPAVNRM NVIR+ +ARGFNPGLIVLLVVG LL AFL GNYALY+YAQK
Sbjct: 1  MEDDFDFGDKVPPAVNRMRNVIRDGEARGFNPGLIVLLVVGGLLFAFLVGNYALYMYAQK 60

Query: 61 TLPPKRKKPVSKKKMKRERLKQ 82
          TLPPK+KKPVSKKKMKRERLKQ
Sbjct: 61 TLPPKKKKPVSKKKMKRERLKQ 82

[Close]

BLAST of Csor.00g033910 vs. TAIR 10
Match: AT3G53370.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 84.0 bits (206), Expect = 7.0e-17
Identity = 44/58 (75.86%), Postives = 50/58 (86.21%), Query Frame = 0


Query: 25 ADARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQKTLPPKRKKPVSKKKMKRERLKQ 83
          A+A+G NPGLIVLLVVG  LL FL  NY LYVYAQK LPP++KKPVSKKK+KRE+LKQ
Sbjct: 12 AEAKGLNPGLIVLLVVGGPLLVFLIANYVLYVYAQKNLPPRKKKPVSKKKLKREKLKQ 69

[Close]

BLAST of Csor.00g033910 vs. TAIR 10
Match: AT3G09735.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 82.0 bits (201), Expect = 2.7e-16
Identity = 40/57 (70.18%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 26 DARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQKTLPPKRKKPVSKKKMKRERLKQ 83
          +++G NPGLIVLLV+G LLL FL GN+ LY YAQK LPP++KKPVSKKKMK+E++KQ
Sbjct: 10 ESKGLNPGLIVLLVIGGLLLTFLVGNFILYTYAQKNLPPRKKKPVSKKKMKKEKMKQ 66

[Close]

BLAST of Csor.00g033910 vs. TAIR 10
Match: AT2G37120.1 (S1FA-like DNA-binding protein )

HSP 1 Score: 80.5 bits (197), Expect = 7.7e-16
Identity = 39/57 (68.42%), Postives = 50/57 (87.72%), Query Frame = 0


Query: 26 DARGFNPGLIVLLVVGVLLLAFLAGNYALYVYAQKTLPPKRKKPVSKKKMKRERLKQ 83
          +A+G NPGLIVLLV+G LL+ FL  NY +Y+YAQK LPP++KKP+SKKK+KRE+LKQ
Sbjct: 13 EAKGLNPGLIVLLVIGGLLVTFLIANYVMYMYAQKNLPPRKKKPLSKKKLKREKLKQ 69

The following BLAST results are available for this feature:

BLAST of Csor.00g033910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42552	6.2e-18	71.88	DNA-binding protein S1FA OS=Spinacia oleracea OX=3562 GN=S1FA PE=3 SV=1	[more]
Q7XLX6	6.8e-17	71.43	DNA-binding protein S1FA2 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA2 PE=3...	[more]
P42553	2.6e-16	65.67	DNA-binding protein S1FA1 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA1 PE=3...	[more]
P42551	9.9e-16	75.86	DNA-binding protein S1FA1 OS=Arabidopsis thaliana OX=3702 GN=S1FA1 PE=3 SV=2	[more]
Q93VI0	3.7e-15	70.18	DNA-binding protein S1FA3 OS=Arabidopsis thaliana OX=3702 GN=S1FA3 PE=3 SV=1	[more]

BLAST of Csor.00g033910 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595263.1	1.25e-54	100.00	DNA-binding protein S1FA2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022962636.1	2.04e-46	98.78	DNA-binding protein S1FA-like [Cucurbita moschata] >XP_023517292.1 DNA-binding p...	[more]
XP_038881351.1	4.81e-45	95.12	DNA-binding protein S1FA-like [Benincasa hispida]	[more]
XP_022972581.1	1.61e-43	93.90	DNA-binding protein S1FA-like [Cucurbita maxima]	[more]
XP_004143239.1	1.33e-42	90.24	DNA-binding protein S1FA [Cucumis sativus] >KGN48135.1 hypothetical protein Csa_...	[more]

BLAST of Csor.00g033910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HDT2	9.87e-47	98.78	DNA-binding protein S1FA-like OS=Cucurbita moschata OX=3662 GN=LOC111463054 PE=3...	[more]
A0A6J1I6D0	7.81e-44	93.90	DNA-binding protein S1FA-like OS=Cucurbita maxima OX=3661 GN=LOC111471126 PE=3 S...	[more]
A0A0A0KEM3	6.42e-43	90.24	DNA-binding protein S1FA OS=Cucumis sativus OX=3659 GN=Csa_6G445000 PE=3 SV=1	[more]
A0A5A7TZ88	1.07e-41	89.02	DNA-binding protein S1FA-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BLN5	1.07e-41	89.02	DNA-binding protein S1FA-like OS=Cucumis melo OX=3656 GN=LOC103491199 PE=3 SV=1	[more]

BLAST of Csor.00g033910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53370.1	7.0e-17	75.86	S1FA-like DNA-binding protein	[more]
AT3G09735.1	2.7e-16	70.18	S1FA-like DNA-binding protein	[more]
AT2G37120.1	7.7e-16	68.42	S1FA-like DNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006779	DNA binding protein S1FA	PFAM	PF04689	S1FA	coord: 25..82 e-value: 3.6E-34 score: 116.7
IPR006779	DNA binding protein S1FA	PANTHER	PTHR35298	DNA-BINDING PROTEIN S1FA2	coord: 3..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..91
None	No IPR available	PANTHER	PTHR35298:SF9	DNA-BINDING PROTEIN S1FA1-RELATED	coord: 3..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g033910.m01	Csor.00g033910.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding