Csor.00g033580 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g033580
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	cell division cycle 48
Location	Csor_Chr07: 4378150 .. 4380064 (+)
RNA-Seq Expression	Csor.00g033580
Synteny	Csor.00g033580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATCAAGCTGAATCCTCCGACTCGTAAGCTCTCTCCCCAATTTCCTAGATCCCAATTTCAATTCTTCTTCACCTTCTTCATTTCGTGTTTTTCCGATGAGTAATTTCTGCTCTGATTGTGATTTTGTTGCCTGATTATGCTGTCAATGCGTTTTTTTTTTTTTTTTTCTTTCTTTCTTCTAGTAAGGGTTCCAAGAGAGATTTTAGTACTGCGATTCTAGAGCGCAAGAAAGCCGCGAACCGGCTTATTGTCGATGAGGCCGTCAATGATGACAACTCGGTGGTTGCGCTTCACCCTGATACTATGGAGAAGCTTCAACTCTTCCGTGGCGATACGATCTTGATCAAGGTATGATTTTATTCTCGTTTTTATGTATCAGTTGTTTATCATTTCCTGGACGTATTTATTTGTTCATTGAGCTAGGTTTTTAAAAATGTTTTGCCCTAAGTGATGTTGCTGAATTTTGTAGGATCGGGGAGGTTTGCTCTTCCCTTTTTGGATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTGAAAAAAATAAAATTTCATAATTTTAGATTAACTAGTGGTTCCATTTGGTATTTCGGGTCCGTGAATTGAGTGCGTTTTGATTTTTGGAGTAGAGGGCGTCATTAGTTCTTCTAGGCGGTCTTTTCTTTTTGAGTTCGGAAAGTTTGATATTGTGGACTTTGTGGTTGTTATGAAGTTTGGGTTGGGTTTACATAGCTTGTGGTTATACCATAGAAATGAATGAGTTACAGAAGTTTATGTAGCTTGTGTGTTGATTTGCAAGTTGTGATTTTGAGATTTATAGAAGTTATTGGAAGCTTAGAAGACGAGTTTCATTAAACTGTGCTATTCTGAAGTTTTTCGTAATAAGTTACCACAACTCTCCATTTTGGCTCAGAAGACTACTTAAACAATTTTGTCTGCTATGTACATCATTGCCAGATCTTGAAATATTGTTTTTGAAATTTGGTCAGGAGGAATTGAGGACTTTTTAGTGAGAATTCCAGGGTTTTTTTTTTTTGGATGAGAATCTTGTGGCTGAGTACAAAATTGTTCTGAGGATAGTTTTCTGTTTTCTTTTGGAAACTGATTCTGATTGGACGACTTATGAAGTCAATGTTATTGTACACGGAGCAAATTTGTAATTTAGGAAGAAATAGTAACTTCATTATTGCTATTATTTTGGTAAAACAAATCATTATTGAGCATGCTAACAAAAAACAGCTTTATTAAACCGTTATCTAACGTGTTCGTACATGATTTTTGTTCTGCAAAAACGGAACCGTCTAAAATCAGTCCTTTGGGTTTCTTTTTCCCTAGCTTCTAATTGGAACAAAAGACTTCTAGAACTATCTTCCTTTTTTTTTTTTTTTTTTTTTTTTTCTGATTCCACCCAATTAGATAGTATTTTAAGATCTCCTTTGTTCTTGGAAGGGGATGGACTTCGCTTCCTTCCCTTTTACTTGTCCATTTTGGGATCTTAGGAACTTCTTCCTAGGAAAAAAAAATGTTGCTTTCTCATACTCAGCTTGAGATCGTTCTTGAATGGCATGCAATATTTTGTTTGTAACTGTATCTTTTGTCTTCCTTCTGGAGTTCAGGGGAAGAAAAGGAGGGATACAATCTGCATCGCTCTTGCTGATGACACATGTGATGAACCAAAAATAAGAATGAACAAGGTTGTGAGAAGCAACCTTCGGGTGAGGCTTGGAGATGTTGTTTCCGTGCATCAGTGTGCTGATGTTAAATATGGAAAGCGGGTACACATTCTTCCAGTAGATGACACTATTGAAGGTGTCACTGGGAATCTTTTTGATGCATACTTAAAACGTGAGATTCTATCCTACCTATTTCTTTCCGTTGATTTGTCTTTTGCTTCTTGTTTGTTTTAA

mRNA sequence

ATGGCGAATCAAGCTGAATCCTCCGACTCTAAGGGTTCCAAGAGAGATTTTAGTACTGCGATTCTAGAGCGCAAGAAAGCCGCGAACCGGCTTATTGTCGATGAGGCCGTCAATGATGACAACTCGGTGGTTGCGCTTCACCCTGATACTATGGAGAAGCTTCAACTCTTCCGTGGCGATACGATCTTGATCAAGGGGAAGAAAAGGAGGGATACAATCTGCATCGCTCTTGCTGATGACACATGTGATGAACCAAAAATAAGAATGAACAAGGTTGTGAGAAGCAACCTTCGGGTGAGGCTTGGAGATGTTGTTTCCGTGCATCAGTGTGCTGATGTTAAATATGGAAAGCGGGTACACATTCTTCCAGTAGATGACACTATTGAAGGTGTCACTGGGAATCTTTTTGATGCATACTTAAAACGTGAGATTCTATCCTACCTATTTCTTTCCGTTGATTTGTCTTTTGCTTCTTGTTTGTTTTAA

Coding sequence (CDS)

ATGGCGAATCAAGCTGAATCCTCCGACTCTAAGGGTTCCAAGAGAGATTTTAGTACTGCGATTCTAGAGCGCAAGAAAGCCGCGAACCGGCTTATTGTCGATGAGGCCGTCAATGATGACAACTCGGTGGTTGCGCTTCACCCTGATACTATGGAGAAGCTTCAACTCTTCCGTGGCGATACGATCTTGATCAAGGGGAAGAAAAGGAGGGATACAATCTGCATCGCTCTTGCTGATGACACATGTGATGAACCAAAAATAAGAATGAACAAGGTTGTGAGAAGCAACCTTCGGGTGAGGCTTGGAGATGTTGTTTCCGTGCATCAGTGTGCTGATGTTAAATATGGAAAGCGGGTACACATTCTTCCAGTAGATGACACTATTGAAGGTGTCACTGGGAATCTTTTTGATGCATACTTAAAACGTGAGATTCTATCCTACCTATTTCTTTCCGTTGATTTGTCTTTTGCTTCTTGTTTGTTTTAA

Protein sequence

MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGDTILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVHILPVDDTIEGVTGNLFDAYLKREILSYLFLSVDLSFASCLF

Homology

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BLAST of Csor.00g033580 vs. ExPASy Swiss-Prot
Match: Q9SCN8 (Cell division control protein 48 homolog D OS=Arabidopsis thaliana OX=3702 GN=CDC48D PE=1 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.1e-69
Identity = 126/141 (89.36%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
           MANQAESSDSKG+K+DFSTAILE+KKAANRL+VDEA+NDDNSVV+LHPDTMEKLQLFRGD
Sbjct: 1   MANQAESSDSKGTKKDFSTAILEKKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKR+DT+CIALAD+TCDEPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYG RVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCDEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLK 142
           ILP+DDTIEGV+GN+FDAYLK
Sbjct: 121 ILPLDDTIEGVSGNIFDAYLK 141

[Close]

BLAST of Csor.00g033580 vs. ExPASy Swiss-Prot
Match: Q96372 (Cell division cycle protein 48 homolog OS=Capsicum annuum OX=4072 GN=CAFP PE=2 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.3e-66
Identity = 125/141 (88.65%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
           M +QAESSDSK +K+DFSTAILERKKAANRL+VDEAVNDDNSVVALHP TMEKLQLFRGD
Sbjct: 1   MTDQAESSDSKNAKKDFSTAILERKKAANRLVVDEAVNDDNSVVALHPATMEKLQLFRGD 60

Query: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKR+DT+ IALAD+TCDEPKIRMNKVVRSNLRVRLGDVVSVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVVIALADETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLK 142
           ILP+DDTIEG+TG+LFDA+LK
Sbjct: 121 ILPIDDTIEGLTGDLFDAFLK 141

[Close]

BLAST of Csor.00g033580 vs. ExPASy Swiss-Prot
Match: Q9LZF6 (Cell division control protein 48 homolog E OS=Arabidopsis thaliana OX=3702 GN=CDC48E PE=2 SV=2)

HSP 1 Score: 250.8 bits (639), Expect = 1.1e-65
Identity = 122/141 (86.52%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
           M+N+ ESSDSK +K+DFSTAILERKK+ NRL+VDEA+NDDNSVV+LHP TMEKLQLFRGD
Sbjct: 1   MSNEPESSDSK-TKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQLFRGD 60

Query: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKR+DT+CIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLK 142
           ILPVDDT+EGVTGNLFDAYLK
Sbjct: 121 ILPVDDTVEGVTGNLFDAYLK 140

[Close]

BLAST of Csor.00g033580 vs. ExPASy Swiss-Prot
Match: P54609 (Cell division control protein 48 homolog A OS=Arabidopsis thaliana OX=3702 GN=CDC48A PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.8e-65
Identity = 123/141 (87.23%), Postives = 135/141 (95.74%), Query Frame = 0


Query: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
           M+  AESSDSK SK+DFSTAILERKK+ NRL+VDEA+NDDNSVV+LHP TMEKLQLFRGD
Sbjct: 1   MSTPAESSDSK-SKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGD 60

Query: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKR+DT+CIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLK 142
           ILPVDDT+EGVTGNLFDAYLK
Sbjct: 121 ILPVDDTVEGVTGNLFDAYLK 140

[Close]

BLAST of Csor.00g033580 vs. ExPASy Swiss-Prot
Match: P54774 (Cell division cycle protein 48 homolog OS=Glycine max OX=3847 GN=CDC48 PE=2 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 3.1e-65
Identity = 121/141 (85.82%), Postives = 131/141 (92.91%), Query Frame = 0


Query: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
           M+ Q ESSD K  K+DFSTAILERKK+ NRL+VDEAVNDDNSVV +HP TMEKLQLFRGD
Sbjct: 1   MSQQGESSDPKSGKKDFSTAILERKKSPNRLVVDEAVNDDNSVVTMHPQTMEKLQLFRGD 60

Query: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKR+DTICIALAD+ C+EPKIRMNKVVRSNLRVRLGDVVSVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADENCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLK 142
           ILP+DDTIEGVTGNLFDA+LK
Sbjct: 121 ILPIDDTIEGVTGNLFDAFLK 141

[Close]

BLAST of Csor.00g033580 vs. NCBI nr
Match: KAG6595230.1 (Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 315 bits (808), Expect = 2.35e-108
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0


Query: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
           MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD
Sbjct: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKREILSYLFLSVDLSFASCLF 161
           ILPVDDTIEGVTGNLFDAYLKREILSYLFLSVDLSFASCLF
Sbjct: 121 ILPVDDTIEGVTGNLFDAYLKREILSYLFLSVDLSFASCLF 161

[Close]

BLAST of Csor.00g033580 vs. NCBI nr
Match: XP_022859869.1 (cell division control protein 48 homolog D-like [Olea europaea var. sylvestris])

HSP 1 Score: 279 bits (713), Expect = 1.08e-93
Identity = 138/152 (90.79%), Postives = 147/152 (96.71%), Query Frame = 0


Query: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
           M+NQ ESSDS+G+KRDFSTAILERKKAANRL+VDEAVNDDNSVVALHPDTMEKLQLFRGD
Sbjct: 1   MSNQPESSDSRGAKRDFSTAILERKKAANRLVVDEAVNDDNSVVALHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKR+DT+CIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVCIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKREILSYLFLSV 152
           ILPVDDTIEGVTGNLFDAYLKR+ L +L L +
Sbjct: 121 ILPVDDTIEGVTGNLFDAYLKRKFLKHLNLCI 152

[Close]

BLAST of Csor.00g033580 vs. NCBI nr
Match: KAG6596480.1 (Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 278 bits (711), Expect = 2.59e-93
Identity = 139/151 (92.05%), Postives = 147/151 (97.35%), Query Frame = 0


Query: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
           MANQAESSDSKG+KRDFSTAILERKKA NRL+VDEA+NDDNSVVALHPDTMEKLQLFRGD
Sbjct: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKR+DTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKREILSYLFLS 151
           ILPVDDTIEGVTGNLFDAYLKR+   Y+F++
Sbjct: 121 ILPVDDTIEGVTGNLFDAYLKRKF--YIFIN 149

[Close]

BLAST of Csor.00g033580 vs. NCBI nr
Match: XP_023539536.1 (cell division control protein 48 homolog D-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275 bits (703), Expect = 2.27e-91
Identity = 137/145 (94.48%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
           MANQAESSDSKG+KRDFSTAILERKKA NRL+VDEA+NDDNSVVALHPDTMEKLQLFRGD
Sbjct: 1   MANQAESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKR+DTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKREIL 145
           ILPVDDTIEGVTGNLFDAYLK   L
Sbjct: 121 ILPVDDTIEGVTGNLFDAYLKPYFL 145

[Close]

BLAST of Csor.00g033580 vs. NCBI nr
Match: KAG6580612.1 (Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 272 bits (696), Expect = 3.44e-91
Identity = 134/141 (95.04%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
           MANQ ESSDSKG+KRDFSTAILERKKA NRL+VDEA+NDDNSVVALHPDTMEKLQLFRGD
Sbjct: 1   MANQPESSDSKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKR+DTICIALADDTCDEPKIRMNKVVRSNLRVRLGDV+SVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVISVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLK 141
           ILPVDDTIEGVTGNLFDAYLK
Sbjct: 121 ILPVDDTIEGVTGNLFDAYLK 141

[Close]

BLAST of Csor.00g033580 vs. ExPASy TrEMBL
Match: A0A2P5CH24 (AAA ATPase, CDC48 family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_153160 PE=4 SV=1)

HSP 1 Score: 274 bits (701), Expect = 2.83e-90
Identity = 135/145 (93.10%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
           M+NQAESSDSKG+KRDFSTAILERKKAANRL+VDEA+NDDNSVV+LHPDTMEKLQLFRGD
Sbjct: 1   MSNQAESSDSKGTKRDFSTAILERKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKR+DTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKREIL 145
           ILP+DDTIEGVTGNLFDAYLK   L
Sbjct: 121 ILPIDDTIEGVTGNLFDAYLKPYFL 145

[Close]

BLAST of Csor.00g033580 vs. ExPASy TrEMBL
Match: A0A067E2N8 (CDC48_N domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0036232mg PE=4 SV=1)

HSP 1 Score: 267 bits (683), Expect = 6.59e-90
Identity = 130/141 (92.20%), Postives = 138/141 (97.87%), Query Frame = 0


Query: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
           M+NQAESSD+KG+KRDFSTAILERKKA NRL+VDEA+NDDNSVV LHPDTMEKLQ FRGD
Sbjct: 1   MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAINDDNSVVVLHPDTMEKLQFFRGD 60

Query: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKR+DT+CIALADDTC+EPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLK 141
           ILPVDDTIEGVTGNLFDAYLK
Sbjct: 121 ILPVDDTIEGVTGNLFDAYLK 141

[Close]

BLAST of Csor.00g033580 vs. ExPASy TrEMBL
Match: A0A2R6R7W6 (Cell division control protein 48 D like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc08477 PE=4 SV=1)

HSP 1 Score: 271 bits (692), Expect = 5.24e-89
Identity = 133/145 (91.72%), Postives = 141/145 (97.24%), Query Frame = 0


Query: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
           M+NQAESSDSKG+KRDFSTAILERKK+ NRL+VDEA+NDDNSVVALHPDTMEKLQLFRGD
Sbjct: 1   MSNQAESSDSKGTKRDFSTAILERKKSPNRLVVDEAINDDNSVVALHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKR+DTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKREIL 145
           ILP+DD+IEGVTGNLFDAYLK   L
Sbjct: 121 ILPIDDSIEGVTGNLFDAYLKPYFL 145

[Close]

BLAST of Csor.00g033580 vs. ExPASy TrEMBL
Match: A0A072TJQ8 (Cell division control-like protein OS=Medicago truncatula OX=3880 GN=MTR_0041s0130 PE=4 SV=1)

HSP 1 Score: 264 bits (674), Expect = 1.72e-88
Identity = 132/143 (92.31%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MANQAESSDSKGS-KRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRG 60
           MANQ ESSD+KG+ KRDFSTAILERKKA NRL+VDEAVNDDNSVVALHP+TMEKLQLFRG
Sbjct: 1   MANQPESSDAKGTTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVALHPETMEKLQLFRG 60

Query: 61  DTILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRV 120
           DTILIKGKKR+DTICIALAD+TC+EPKIRMNKVVR+NLRVRLGDVVSVHQCADVKYGKRV
Sbjct: 61  DTILIKGKKRKDTICIALADETCEEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRV 120

Query: 121 HILPVDDTIEGVTGNLFDAYLKR 142
           HILPVDDTIEGVTGNLFDAYLKR
Sbjct: 121 HILPVDDTIEGVTGNLFDAYLKR 143

[Close]

BLAST of Csor.00g033580 vs. ExPASy TrEMBL
Match: A0A2P5FV89 (AAA ATPase, CDC48 family OS=Trema orientale OX=63057 GN=TorRG33x02_024880 PE=3 SV=1)

HSP 1 Score: 274 bits (701), Expect = 1.96e-88
Identity = 135/145 (93.10%), Postives = 142/145 (97.93%), Query Frame = 0


Query: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
           M+NQAESSDSKG+KRDFSTAILERKKAANRL+VDEA+NDDNSVV+LHPDTMEKLQLFRGD
Sbjct: 1   MSNQAESSDSKGTKRDFSTAILERKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKR+DTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
Sbjct: 61  TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLKREIL 145
           ILP+DDTIEGVTGNLFDAYLK   L
Sbjct: 121 ILPIDDTIEGVTGNLFDAYLKPYFL 145

[Close]

BLAST of Csor.00g033580 vs. TAIR 10
Match: AT3G53230.1 (ATPase, AAA-type, CDC48 protein )

HSP 1 Score: 263.1 bits (671), Expect = 1.5e-70
Identity = 126/141 (89.36%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
           MANQAESSDSKG+K+DFSTAILE+KKAANRL+VDEA+NDDNSVV+LHPDTMEKLQLFRGD
Sbjct: 1   MANQAESSDSKGTKKDFSTAILEKKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGD 60

Query: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKR+DT+CIALAD+TCDEPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYG RVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCDEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLK 142
           ILP+DDTIEGV+GN+FDAYLK
Sbjct: 121 ILPLDDTIEGVSGNIFDAYLK 141

[Close]

BLAST of Csor.00g033580 vs. TAIR 10
Match: AT5G03340.1 (ATPase, AAA-type, CDC48 protein )

HSP 1 Score: 250.8 bits (639), Expect = 7.7e-67
Identity = 122/141 (86.52%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
           M+N+ ESSDSK +K+DFSTAILERKK+ NRL+VDEA+NDDNSVV+LHP TMEKLQLFRGD
Sbjct: 1   MSNEPESSDSK-TKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQLFRGD 60

Query: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKR+DT+CIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLK 142
           ILPVDDT+EGVTGNLFDAYLK
Sbjct: 121 ILPVDDTVEGVTGNLFDAYLK 140

[Close]

BLAST of Csor.00g033580 vs. TAIR 10
Match: AT3G09840.1 (cell division cycle 48 )

HSP 1 Score: 250.0 bits (637), Expect = 1.3e-66
Identity = 123/141 (87.23%), Postives = 135/141 (95.74%), Query Frame = 0


Query: 1   MANQAESSDSKGSKRDFSTAILERKKAANRLIVDEAVNDDNSVVALHPDTMEKLQLFRGD 60
           M+  AESSDSK SK+DFSTAILERKK+ NRL+VDEA+NDDNSVV+LHP TMEKLQLFRGD
Sbjct: 1   MSTPAESSDSK-SKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGD 60

Query: 61  TILIKGKKRRDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH 120
           TILIKGKKR+DT+CIALAD+TC+EPKIRMNKVVRSNLRVRLGDV+SVHQC DVKYGKRVH
Sbjct: 61  TILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVH 120

Query: 121 ILPVDDTIEGVTGNLFDAYLK 142
           ILPVDDT+EGVTGNLFDAYLK
Sbjct: 121 ILPVDDTVEGVTGNLFDAYLK 140

The following BLAST results are available for this feature:

BLAST of Csor.00g033580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCN8	2.1e-69	89.36	Cell division control protein 48 homolog D OS=Arabidopsis thaliana OX=3702 GN=CD...	[more]
Q96372	1.3e-66	88.65	Cell division cycle protein 48 homolog OS=Capsicum annuum OX=4072 GN=CAFP PE=2 S...	[more]
Q9LZF6	1.1e-65	86.52	Cell division control protein 48 homolog E OS=Arabidopsis thaliana OX=3702 GN=CD...	[more]
P54609	1.8e-65	87.23	Cell division control protein 48 homolog A OS=Arabidopsis thaliana OX=3702 GN=CD...	[more]
P54774	3.1e-65	85.82	Cell division cycle protein 48 homolog OS=Glycine max OX=3847 GN=CDC48 PE=2 SV=1	[more]

BLAST of Csor.00g033580 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595230.1	2.35e-108	100.00	Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022859869.1	1.08e-93	90.79	cell division control protein 48 homolog D-like [Olea europaea var. sylvestris]	[more]
KAG6596480.1	2.59e-93	92.05	Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_023539536.1	2.27e-91	94.48	cell division control protein 48 homolog D-like [Cucurbita pepo subsp. pepo]	[more]
KAG6580612.1	3.44e-91	95.04	Cell division control protein 48-like D, partial [Cucurbita argyrosperma subsp. ...	[more]

BLAST of Csor.00g033580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5CH24	2.83e-90	93.10	AAA ATPase, CDC48 family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_153160 P...	[more]
A0A067E2N8	6.59e-90	92.20	CDC48_N domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN...	[more]
A0A2R6R7W6	5.24e-89	91.72	Cell division control protein 48 D like OS=Actinidia chinensis var. chinensis OX...	[more]
A0A072TJQ8	1.72e-88	92.31	Cell division control-like protein OS=Medicago truncatula OX=3880 GN=MTR_0041s01...	[more]
A0A2P5FV89	1.96e-88	93.10	AAA ATPase, CDC48 family OS=Trema orientale OX=63057 GN=TorRG33x02_024880 PE=3 S...	[more]

BLAST of Csor.00g033580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53230.1	1.5e-70	89.36	ATPase, AAA-type, CDC48 protein	[more]
AT5G03340.1	7.7e-67	86.52	ATPase, AAA-type, CDC48 protein	[more]
AT3G09840.1	1.3e-66	87.23	cell division cycle 48	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003338	CDC48, N-terminal subdomain	SMART	SM01073	CDC48_N_2	coord: 30..113 e-value: 1.0E-32 score: 124.7
IPR003338	CDC48, N-terminal subdomain	PFAM	PF02359	CDC48_N	coord: 30..111 e-value: 5.3E-24 score: 84.2
None	No IPR available	GENE3D	2.40.40.20		coord: 7..112 e-value: 3.4E-53 score: 179.5
None	No IPR available	GENE3D	3.10.330.10		coord: 113..147 e-value: 2.4E-9 score: 39.1
None	No IPR available	PANTHER	PTHR23077	AAA-FAMILY ATPASE	coord: 5..145
None	No IPR available	PANTHER	PTHR23077:SF157	SUBFAMILY NOT NAMED	coord: 5..145
IPR009010	Aspartate decarboxylase-like domain superfamily	SUPERFAMILY	50692	ADC-like	coord: 28..110
IPR029067	CDC48 domain 2-like superfamily	SUPERFAMILY	54585	Cdc48 domain 2-like	coord: 112..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g033580.m01	Csor.00g033580.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0097352	autophagosome maturation
biological_process	GO:0051301	cell division
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0051228	mitotic spindle disassembly
biological_process	GO:0030970	retrograde protein transport, ER to cytosol
biological_process	GO:0030433	ubiquitin-dependent ERAD pathway
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0034098	VCP-NPL4-UFD1 AAA ATPase complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0031593	polyubiquitin modification-dependent protein binding