Csor.00g033000 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g033000
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	vacuolar protein sorting-associated protein 55 homolog isoform X1
Location	Csor_Chr07: 3991402 .. 3993806 (+)
RNA-Seq Expression	Csor.00g033000
Synteny	Csor.00g033000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACCACTACTGTTGGAGTCTCATTCAAACCATTGGTCCATTTGTTGCTCATTTTGACATTCTGTATCTTAATTTAATGTTAACTAATGTTCTTGATCTTCCTTGGTTGGTGCCTCGTGGTGTTCGGGGAACATGGATGAATCTCATCATATCTGCAGTGTAAGTCAAATTTATCACTATTAGTTCTTAATTCTGATGCCTAACTTTATGAAAAAATGTAAATGACCCCCCACCTCTCGGTTGTGCAGGTTAGCTGGGCTTGCGTTTATGTTTTCATCAAGCATCTTGCTACAGATCTTGGTATGCTTTGTACACTCATATATCTTACTGATATTATAGTACTCGTTCTGCTGCGTCACTGTAAAATAAATTGGTTTGATAGTATTGATTCGAATCCTAAACTTTATAGCTCTTCTGACAGAATTTAGCACAAATTAATGATTTAGATTTTATCCACGTCTTTTTTAAAAACAATTTATAACTAGTTTATGAAGCGTATGTAGAGTAACTGTATCCTTACGACGAAGCTTTTAATCACTGTAAAGTAGCAGAAAAAGAAGGTGTGGTTAAGTATTATTGTAATCTAAAGATATCTCAAGTTTAGCATTTAATATATGTTTTATGATATTGTTCCTGGTCTTTTGAAAGAGCTTAGGTTTGAGAACATATATTTCCTTATCTACCTATTAATAATCTTTGTGTGTTTACTGTTGGACTCAAGGAGTAAGAATATGGATAGCAACCCGACTACGAGTGATGACATTGCTTTTTGATATCCTACCTGACATGTTGGTTTGATGTCAAAAGTTGATGCAGGATAAGAAACAAACAAAGTAGATCCAGAATTTGTCTGTAGGATTGCAACCTGTCGGATTAAGTAGTAAGAGGTTGCAGATAGGGATTGTAAGAATCACCTTAGAGTTCTCAAGCATCACACTTCAGGTTATTGTTGTGTCGCACAATTCAATGAAGGTGTTGAGAGATTTTGTAGTTTCATTCAATAATTCAAAATAGAATTGTACACCTACTCGTATACTTATTTGCGTCTACTAGGGAGAGACTTTCACACCCTTATAAGGAATGCTTCATTTCCCTCTCCAACCGACATGGGATCTCACAATCCACCCCCCTTGGGGTCCCAGCGTCCTCACTGGCACACCGTCTGGTGTCTGGCTCTAATACCATTTGTAACAGCCCAAGCCCACCGCTAGCAGATATTATTCGCTTTGACCTATTAAGTATCGCCGTCAGCCTCACAGTTTTAAAACAAGTCTGCTAGGGAGAGATTTTCACACCCTTATAAAGAATGTTTCGTTTCCCTCTCCAACTGATGTGGGATCTCACAATCCACCCCCTTGGGGGCCTAGCGTCCTCGCTGGCACACCATTCGGTATCTAGCTCTAATACTATTTGTAACAGCCCAAGCCCACTGCCAGTAGATATTATCCGCTTTGGCTCATTGAGTATCGTCGTCAGCCTCACGATTTTAAGACGTATCTGCTAGGGATAGATTTTCACACCCTTATAAGGAATGCTTCATTCCCCTCTCCAACCAACGTGGGATCTCACACTTCTAATCATTAATTTTCTTTAAAAATATATATATAAGGGATTAAATTCTCTGTAAAATTTAAAAGCATTAATCTTAGATACTAAAAGATCCATTAAAACTGGAGAAACATCAAAATACTTATCTTAGAAGCCAATGACCATACTAAAGGATCAGTAAACAAACAACAAACCCATTCTAGCAGGCAATAGGCACTAATCAAAGACTCTTTTTTTGAGAGGATCACTGCAAAAAGCTTCCATGTTTTATAAACTAGACAAGTTGTGAACCATTTATTATTCATTGTTCGTCTGTTTTTGTTATCATCATGGCAGGCTTGTGCCCTATATAACAATTGGTGGCCTCTGTTATCAGGTGAGCATTAAGCTTGTTGTTTCCTTTTAGATAGCTTTTAATGGCTACTAATCATGTTTGCTCTGCAGCTTTGATGTATGTGCTTGTTCCAATGCCTTGTTTATTTTTCGGAGGTGGGTCGACGCAGTTTTTGACTAGTCGAGATGGCGGAGGGTAAGTATCTCTTAAGCATTCATCCATGTAATCCAGATATGTTTGTGTCATGCTTTGTTTTAGAACTATGATGTCCTTGTTTTCATTGTCTAACTTCTACCCTTCATTCCAACACGTGTATGCGTGTCGTTGCGACTTCAAGATGGATCGGTGCTGCTAAATTCTTAACGGGAGCATCAACCGTGGGGAGTTTGGCAATTCCTATTATCCTCAGGCATGCTCATATGATCGACACAGGAGCCATGTTCATAGAATTTGTTTCGTTCTTCATTTTTGTTTGCACCGTGTTGTGCTTCCACCGTGTTAGCCTTGAAGATGATTGGTGA

mRNA sequence

ATGTACCACTACTGTTGGAGTCTCATTCAAACCATTGGTCCATTTGTTGCTCATTTTGACATTCTGTATCTTAATTTAATGTTAACTAATGTTCTTGATCTTCCTTGGTTGGTGCCTCGTGGTGTTCGGGGAACATGGATGAATCTCATCATATCTGCAGTGTTAGCTGGGCTTGCGTTTATGTTTTCATCAAGCATCTTGCTACAGATCTTGGCTTGTGCCCTATATAACAATTGGTGGCCTCTGTTATCAGCTTTGATGTATGTGCTTGTTCCAATGCCTTGTTTATTTTTCGGAGGTGGGTCGACGCAGTTTTTGACTAGTCGAGATGGCGGAGGATGGATCGGTGCTGCTAAATTCTTAACGGGAGCATCAACCGTGGGGAGTTTGGCAATTCCTATTATCCTCAGGCATGCTCATATGATCGACACAGGAGCCATGTTCATAGAATTTGTTTCGTTCTTCATTTTTGTTTGCACCGTGTTGTGCTTCCACCGTGTTAGCCTTGAAGATGATTGGTGA

Coding sequence (CDS)

ATGTACCACTACTGTTGGAGTCTCATTCAAACCATTGGTCCATTTGTTGCTCATTTTGACATTCTGTATCTTAATTTAATGTTAACTAATGTTCTTGATCTTCCTTGGTTGGTGCCTCGTGGTGTTCGGGGAACATGGATGAATCTCATCATATCTGCAGTGTTAGCTGGGCTTGCGTTTATGTTTTCATCAAGCATCTTGCTACAGATCTTGGCTTGTGCCCTATATAACAATTGGTGGCCTCTGTTATCAGCTTTGATGTATGTGCTTGTTCCAATGCCTTGTTTATTTTTCGGAGGTGGGTCGACGCAGTTTTTGACTAGTCGAGATGGCGGAGGATGGATCGGTGCTGCTAAATTCTTAACGGGAGCATCAACCGTGGGGAGTTTGGCAATTCCTATTATCCTCAGGCATGCTCATATGATCGACACAGGAGCCATGTTCATAGAATTTGTTTCGTTCTTCATTTTTGTTTGCACCGTGTTGTGCTTCCACCGTGTTAGCCTTGAAGATGATTGGTGA

Protein sequence

MYHYCWSLIQTIGPFVAHFDILYLNLMLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

Homology

[Close]

BLAST of Csor.00g033000 vs. ExPASy Swiss-Prot
Match: Q9AST6 (Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana OX=3702 GN=At1g32410 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-26
Identity = 60/108 (55.56%), Postives = 80/108 (74.07%), Query Frame = 0


Query: 55  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGW 114
           +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     W
Sbjct: 17  IAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSW 76

Query: 115 IGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL 163
           I AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+ +F+  +L
Sbjct: 77  INAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAIL 124

[Close]

BLAST of Csor.00g033000 vs. ExPASy Swiss-Prot
Match: Q9UUH1 (Vacuolar protein sorting-associated protein 55 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vps55 PE=3 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 8.7e-05
Identity = 33/120 (27.50%), Postives = 59/120 (49.17%), Query Frame = 0


Query: 55  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGST--QFLTSRDGG 114
           + GL+ + +   +L IL+CAL+ NW+PLL  + ++L P+P L     ST   FL   D  
Sbjct: 7   IIGLSSVLAVGFMLVILSCALFKNWYPLLIVIPFILAPLPNLLTKKYSTSHDFLQEED-R 66

Query: 115 GWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDD 173
             +   +F  GA+     A+PI+  +  +I T A  +  V   I    +  + +  ++ +
Sbjct: 67  NLLDFGRFTFGATICTGFALPIVFVNVGLIGTAAATMSCVGGSIIFLVITLYSQAFVQHE 125

[Close]

BLAST of Csor.00g033000 vs. ExPASy Swiss-Prot
Match: P47111 (Vacuolar protein sorting-associated protein 55 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VPS55 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.5e-04
Identity = 30/114 (26.32%), Postives = 57/114 (50.00%), Query Frame = 0


Query: 55  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGG----STQFLTSRD 114
           +  L+   +   LL IL+CAL++N++PL   L+++L P+P   F  G    ++ F++   
Sbjct: 12  IISLSGFLALGFLLVILSCALFHNYYPLFDILIFLLAPIPNTIFNAGNKYHTSDFMSDSS 71

Query: 115 GGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCF 165
             G    A FLTG      +A+P++  H  +I   +  +  +   I   +++ F
Sbjct: 72  NTGQ-DLAHFLTGMLVTSGIALPVVFYHCQLIGHLSCIMCMIGGLIIYSSIVIF 124

[Close]

BLAST of Csor.00g033000 vs. NCBI nr
Match: KAG6595172.1 (Vacuolar protein sorting-associated protein 55-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 352 bits (904), Expect = 1.34e-122
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MYHYCWSLIQTIGPFVAHFDILYLNLMLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAF 60
           MYHYCWSLIQTIGPFVAHFDILYLNLMLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAF
Sbjct: 1   MYHYCWSLIQTIGPFVAHFDILYLNLMLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAF 60

Query: 61  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKF 120
           MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKF
Sbjct: 61  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKF 120

Query: 121 LTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW 173
           LTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Sbjct: 121 LTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW 173

[Close]

BLAST of Csor.00g033000 vs. NCBI nr
Match: XP_022972744.1 (vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 347 bits (889), Expect = 2.59e-120
Identity = 170/173 (98.27%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MYHYCWSLIQTIGPFVAHFDILYLNLMLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAF 60
           MYHYCWSLIQT GPFVAHFDILYLNLMLTNVLDLPW+VPRGVRGTWM+LIISAVLAGLAF
Sbjct: 1   MYHYCWSLIQTNGPFVAHFDILYLNLMLTNVLDLPWVVPRGVRGTWMDLIISAVLAGLAF 60

Query: 61  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKF 120
           MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKF
Sbjct: 61  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKF 120

Query: 121 LTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW 173
           LTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Sbjct: 121 LTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW 173

[Close]

BLAST of Csor.00g033000 vs. NCBI nr
Match: XP_023518928.1 (vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 342 bits (876), Expect = 2.49e-118
Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 0


Query: 1   MYHYCWSLIQTIGPFVAHFDILYLNLMLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAF 60
           MYHY WSLIQTIGPFVAHFDILYLNLMLTNVLDLP +VPRGVRGTWMNLIISAVLAGLAF
Sbjct: 1   MYHYRWSLIQTIGPFVAHFDILYLNLMLTNVLDLPCVVPRGVRGTWMNLIISAVLAGLAF 60

Query: 61  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKF 120
           MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKF
Sbjct: 61  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKF 120

Query: 121 LTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW 173
           LTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Sbjct: 121 LTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW 173

[Close]

BLAST of Csor.00g033000 vs. NCBI nr
Match: XP_022963366.1 (vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita moschata])

HSP 1 Score: 297 bits (760), Expect = 4.93e-101
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 27  MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSAL 86
           MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSAL
Sbjct: 1   MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSAL 60

Query: 87  MYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGA 146
           MYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGA
Sbjct: 61  MYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGA 120

Query: 147 MFIEFVSFFIFVCTVLCFHRVSLEDDW 173
           MFIEFVSFFIFVCTVLCFHRVSLEDDW
Sbjct: 121 MFIEFVSFFIFVCTVLCFHRVSLEDDW 147

[Close]

BLAST of Csor.00g033000 vs. NCBI nr
Match: KAG6604338.1 (Vacuolar protein sorting-associated protein 55-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268 bits (685), Expect = 8.98e-89
Identity = 138/149 (92.62%), Postives = 141/149 (94.63%), Query Frame = 0


Query: 25  NLMLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLS 84
           +L LTNVLDL  +V R VRGTWM+LI SAVLAGLAFMFSSSILLQILACALYNNWWPLLS
Sbjct: 56  HLTLTNVLDLHRVVARAVRGTWMDLI-SAVLAGLAFMFSSSILLQILACALYNNWWPLLS 115

Query: 85  ALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDT 144
           ALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGASTVGSLAIPIILRHA MIDT
Sbjct: 116 ALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAQMIDT 175

Query: 145 GAMFIEFVSFFIFVCTVLCFHRVSLEDDW 173
           GAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Sbjct: 176 GAMFIEFVSFFIFVCTVLCFHRVSLEDDW 203

[Close]

BLAST of Csor.00g033000 vs. ExPASy TrEMBL
Match: A0A6J1ICF8 (vacuolar protein sorting-associated protein 55 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471259 PE=3 SV=1)

HSP 1 Score: 347 bits (889), Expect = 1.25e-120
Identity = 170/173 (98.27%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MYHYCWSLIQTIGPFVAHFDILYLNLMLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAF 60
           MYHYCWSLIQT GPFVAHFDILYLNLMLTNVLDLPW+VPRGVRGTWM+LIISAVLAGLAF
Sbjct: 1   MYHYCWSLIQTNGPFVAHFDILYLNLMLTNVLDLPWVVPRGVRGTWMDLIISAVLAGLAF 60

Query: 61  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKF 120
           MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKF
Sbjct: 61  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKF 120

Query: 121 LTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW 173
           LTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Sbjct: 121 LTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW 173

[Close]

BLAST of Csor.00g033000 vs. ExPASy TrEMBL
Match: A0A6J1HFY6 (vacuolar protein sorting-associated protein 55 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463596 PE=3 SV=1)

HSP 1 Score: 297 bits (760), Expect = 2.39e-101
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 27  MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSAL 86
           MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSAL
Sbjct: 1   MLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLSAL 60

Query: 87  MYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGA 146
           MYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGA
Sbjct: 61  MYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGA 120

Query: 147 MFIEFVSFFIFVCTVLCFHRVSLEDDW 173
           MFIEFVSFFIFVCTVLCFHRVSLEDDW
Sbjct: 121 MFIEFVSFFIFVCTVLCFHRVSLEDDW 147

[Close]

BLAST of Csor.00g033000 vs. ExPASy TrEMBL
Match: A0A6J1EE43 (vacuolar protein sorting-associated protein 55 homolog isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433349 PE=3 SV=1)

HSP 1 Score: 266 bits (679), Expect = 2.91e-88
Identity = 137/149 (91.95%), Postives = 140/149 (93.96%), Query Frame = 0


Query: 25  NLMLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLS 84
           +L LTNVLDL  +V R VRGTWM+LI SAVLAGLAFMFSSSILLQILACALYNNWWPLLS
Sbjct: 50  HLTLTNVLDLHRVVARAVRGTWMDLI-SAVLAGLAFMFSSSILLQILACALYNNWWPLLS 109

Query: 85  ALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDT 144
           ALMYVLVPMPCLFFGGGSTQFL SRDGGGWIGAAKFLTGASTVGSLAIPIILRHA MIDT
Sbjct: 110 ALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAQMIDT 169

Query: 145 GAMFIEFVSFFIFVCTVLCFHRVSLEDDW 173
           GAMFIEFVSFFIFVCTVLC HRVSLEDDW
Sbjct: 170 GAMFIEFVSFFIFVCTVLCLHRVSLEDDW 197

[Close]

BLAST of Csor.00g033000 vs. ExPASy TrEMBL
Match: A0A6J1IRY1 (vacuolar protein sorting-associated protein 55 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478782 PE=3 SV=1)

HSP 1 Score: 260 bits (665), Expect = 4.82e-86
Identity = 132/149 (88.59%), Postives = 139/149 (93.29%), Query Frame = 0


Query: 25  NLMLTNVLDLPWLVPRGVRGTWMNLIISAVLAGLAFMFSSSILLQILACALYNNWWPLLS 84
           +L LTNVLDL   V R +RGTWM+LI SAVLAGLAFMFSSSILLQILACALYNNWWPLLS
Sbjct: 56  HLTLTNVLDLHRAVARAIRGTWMDLI-SAVLAGLAFMFSSSILLQILACALYNNWWPLLS 115

Query: 85  ALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDT 144
           ALMY+L+PMPCLF GGGSTQFL SRDGGGWIGAAKFLTGASTVG+LAIPIILRHA MIDT
Sbjct: 116 ALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKFLTGASTVGNLAIPIILRHAQMIDT 175

Query: 145 GAMFIEFVSFFIFVCTVLCFHRVSLEDDW 173
           GAMFIEFVSFFIFVCTVLCFHRVS+EDDW
Sbjct: 176 GAMFIEFVSFFIFVCTVLCFHRVSIEDDW 203

[Close]

BLAST of Csor.00g033000 vs. ExPASy TrEMBL
Match: A0A0A0KHI6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G453780 PE=3 SV=1)

HSP 1 Score: 243 bits (619), Expect = 3.66e-80
Identity = 121/124 (97.58%), Postives = 122/124 (98.39%), Query Frame = 0


Query: 50  IISAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSR 109
           +I AVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFL SR
Sbjct: 3   LIFAVLAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISR 62

Query: 110 DGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSL 169
           DGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSL
Sbjct: 63  DGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSL 122

Query: 170 EDDW 173
           EDDW
Sbjct: 123 EDDW 126

[Close]

BLAST of Csor.00g033000 vs. TAIR 10
Match: AT3G11530.1 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 207.2 bits (526), Expect = 1.0e-53
Identity = 98/113 (86.73%), Postives = 106/113 (93.81%), Query Frame = 0


Query: 61  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKF 120
           MFSSSILLQILACA+Y NWWP+LSALMYV+VPMPC+FFGGGSTQFL SRDGGGWI AAKF
Sbjct: 1   MFSSSILLQILACAIYGNWWPMLSALMYVVVPMPCMFFGGGSTQFLISRDGGGWIDAAKF 60

Query: 121 LTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW 174
           LTGASTVGSLAIPIILRHA MI+TGAM IEF SFFIF+CTV+CFHR SL+DDW
Sbjct: 61  LTGASTVGSLAIPIILRHAQMIETGAMLIEFTSFFIFICTVMCFHRASLDDDW 113

[Close]

BLAST of Csor.00g033000 vs. TAIR 10
Match: AT3G11530.2 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 207.2 bits (526), Expect = 1.0e-53
Identity = 98/113 (86.73%), Postives = 106/113 (93.81%), Query Frame = 0


Query: 61  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGWIGAAKF 120
           MFSSSILLQILACA+Y NWWP+LSALMYV+VPMPC+FFGGGSTQFL SRDGGGWI AAKF
Sbjct: 1   MFSSSILLQILACAIYGNWWPMLSALMYVVVPMPCMFFGGGSTQFLISRDGGGWIDAAKF 60

Query: 121 LTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW 174
           LTGASTVGSLAIPIILRHA MI+TGAM IEF SFFIF+CTV+CFHR SL+DDW
Sbjct: 61  LTGASTVGSLAIPIILRHAQMIETGAMLIEFTSFFIFICTVMCFHRASLDDDW 113

[Close]

BLAST of Csor.00g033000 vs. TAIR 10
Match: AT1G32410.1 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 121.3 bits (303), Expect = 7.5e-28
Identity = 60/108 (55.56%), Postives = 80/108 (74.07%), Query Frame = 0


Query: 55  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGW 114
           +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     W
Sbjct: 17  IAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSW 76

Query: 115 IGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL 163
           I AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+ +F+  +L
Sbjct: 77  INAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAIL 124

[Close]

BLAST of Csor.00g033000 vs. TAIR 10
Match: AT1G32410.2 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 121.3 bits (303), Expect = 7.5e-28
Identity = 60/108 (55.56%), Postives = 80/108 (74.07%), Query Frame = 0


Query: 55  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGW 114
           +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     W
Sbjct: 17  IAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSW 76

Query: 115 IGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL 163
           I AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+ +F+  +L
Sbjct: 77  INAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAIL 124

[Close]

BLAST of Csor.00g033000 vs. TAIR 10
Match: AT1G32410.3 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 121.3 bits (303), Expect = 7.5e-28
Identity = 60/108 (55.56%), Postives = 80/108 (74.07%), Query Frame = 0


Query: 55  LAGLAFMFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLTSRDGGGW 114
           +A LA + S+ I+LQILACAL+NNWWP+LS +MYVL+PMP LFFGG  +  L +     W
Sbjct: 17  IAFLAILVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSW 76

Query: 115 IGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL 163
           I AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+ +F+  +L
Sbjct: 77  INAAKFLTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAIL 124

The following BLAST results are available for this feature:

BLAST of Csor.00g033000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9AST6	1.1e-26	55.56	Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana O...	[more]
Q9UUH1	8.7e-05	27.50	Vacuolar protein sorting-associated protein 55 OS=Schizosaccharomyces pombe (str...	[more]
P47111	2.5e-04	26.32	Vacuolar protein sorting-associated protein 55 OS=Saccharomyces cerevisiae (stra...	[more]

BLAST of Csor.00g033000 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6595172.1	1.34e-122	100.00	Vacuolar protein sorting-associated protein 55-like protein, partial [Cucurbita ...	[more]
XP_022972744.1	2.59e-120	98.27	vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita max...	[more]
XP_023518928.1	2.49e-118	98.27	vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita pep...	[more]
XP_022963366.1	4.93e-101	100.00	vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita mos...	[more]
KAG6604338.1	8.98e-89	92.62	Vacuolar protein sorting-associated protein 55-like protein, partial [Cucurbita ...	[more]

BLAST of Csor.00g033000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ICF8	1.25e-120	98.27	vacuolar protein sorting-associated protein 55 homolog isoform X1 OS=Cucurbita m...	[more]
A0A6J1HFY6	2.39e-101	100.00	vacuolar protein sorting-associated protein 55 homolog isoform X1 OS=Cucurbita m...	[more]
A0A6J1EE43	2.91e-88	91.95	vacuolar protein sorting-associated protein 55 homolog isoform X1 OS=Cucurbita m...	[more]
A0A6J1IRY1	4.82e-86	88.59	vacuolar protein sorting-associated protein 55 homolog isoform X1 OS=Cucurbita m...	[more]
A0A0A0KHI6	3.66e-80	97.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G453780 PE=3 SV=1	[more]

BLAST of Csor.00g033000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11530.1	1.0e-53	86.73	Vacuolar protein sorting 55 (VPS55) family protein	[more]
AT3G11530.2	1.0e-53	86.73	Vacuolar protein sorting 55 (VPS55) family protein	[more]
AT1G32410.1	7.5e-28	55.56	Vacuolar protein sorting 55 (VPS55) family protein	[more]
AT1G32410.2	7.5e-28	55.56	Vacuolar protein sorting 55 (VPS55) family protein	[more]
AT1G32410.3	7.5e-28	55.56	Vacuolar protein sorting 55 (VPS55) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007262	Vps55/LEPROT	PFAM	PF04133	Vps55	coord: 56..168 e-value: 1.5E-30 score: 105.5
IPR007262	Vps55/LEPROT	PANTHER	PTHR12050	LEPTIN RECEPTOR-RELATED	coord: 55..172
None	No IPR available	PANTHER	PTHR12050:SF0	RH04491P	coord: 55..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g033000.m01	Csor.00g033000.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane