Csor.00g032890 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCAAGAAGTTCTGAATCCTTTTAGTAGAAGGCGCGCGCAGTTTCGTTTGTGCAATGTATCAGGGTATTCGATTCTCGTTTATTTTCATTGAAATTTCTCTTGGAATTGTGGTTTTCCATGAATTAAATCGCCTTTCGTTTCTGCGTTTTGATAGTTACACTAATGAATTGCTGGAGATTCATGCGGATGATCCATCGTTGCACGTATTGTTCATACCTGGAAATCCAGGTCCATATGCTTTTGTGGATTTGGGATTTCGATGCTTCTTTTGATTTTTGCATAATTTCTGAATGGGTTTTGTTCTAAGACAGGGATTGTTTCGTTTTATAAAGATTTTGTTGAATCCCTGTACCAGTTGCTTGGGGGCCGTGTATCTATTACAGGCAAGACATGAATTGTTGGCATTGTTCTTATAGAAAACATTAAATCTTTTACATCTGGGCTGATACTTTTTCTCTTTTTGGCCATCCTTTTGTATACTATCAGCTATTGGTCATCTATCTCAAACGACGAAGGTACTTGCACATCGGTCGTATAAAGTTCATATCTGCTATGCATTTTAGCTTTGGCGAGTGACAAATTCTTTTGGAAATGATGTTTTGTGCACTGCATTCTTATATATGAAATATCAATGGCTCTATGTAGTTGGAGGCTCTGGTTAGTTATGCTTAAGTTTAATGCTTCAAAAGGAAAATTAGTTTATGTTGCTCGGATGCATATAGTGAAGTTTGTTACATAAATTTCCCCAGTGATTTTATGTAATGGATATTGATGTTTCTTTTCTTTTAGGATTGGGAAGGTGGAAGGTTATTTTCATTACAAGAACAAATTGATCATAAGGTAATTCTCTGTTTTATCCGATTTGATTTAGTTATTGATAGCCTAGGGTGGCAAGTGGTCCATGAAAAATATGAAGTCGCGAGTGTACGTCATTTTAAATTGCATGGAGAGCTGTGCATGTGAAATCCCACGTCGGTTGGAGATGGGAGCAGAACATTCCTTATAAGGGTGTGAAAACCTCTCCCTAGCAGATGCGATTTATAACCCTGAGGCTGATGACGATACGTAACGGGCCAAAGCGAACAATATCTGCTAGTGGTGGGCTTGAGTTGTTACAAATGGTACTAGAGCTGGACACCGAGCGGTGTGCCAGCAAGGACGTTGGGCCCCCAATGGGGGTGGAGATTGTGTGATCCCATATCGGTTGGAGAGGGGAACAAAACATTCCTTATAAGGGCGTGGAAACCTCTCCCTAGCAGACGCATTTTAAACCCGTGAGGCTGATAGCGATACGTAACGGGCCAAAGCGGACAATATCTGCTAGCGGTGGGCTTGAGCTGTTACAGTTCAATTGGAATAACATTGCAGAAATTTGGAATTAATATCTCTTGCTCAAGATTATTGTTCATTTCTTTATTATTGTTCATTTCTTTATTATCTGTTTCCTACAGGTCTCTTTTCTCTTTCATATATGGGGCTGAACTATATTCATATTTCTTTTGCAGATAGAATTTGTCAGACAAGAATTACAGAATAAAGACATTCCATTGCTACTGGTAGTTATACCTTGATGATTACAGTTTATGCTCAATGTTCACGATAATCATAAAAGAGTCGCACGGTGCAAAATTTTCAATTGTATTGTTTTGATATCATCTGAATACAATTGAGTTATTCTTTTATTAGTAAGCCACTGCAACCCTTATAAAATTTTATTCTAGTTTAACCCATACACAATAGTTTCTAGTTATAGTGCTCATATTCTTCTTGTTACCTGTTAACTAAACCGAGACAATTTCACTTGTTATGTTAAGAATGAACTTGTTACAATTTTGCAAAGTTCTTCGTTATGACTGTTATTTCAGTAGCTGACCCGTTTGTTCTCTTTGAAGGTTGGGCATTCTATTGGATCGTATATCTCGATTGAATTGTACCGCAAGTTCCAAGATCAGGTATTGGCATAAACTCTTTCTGCTTCTTATGTATTCCCAGCTTTCAAGAGATGTTGCAATGGAAATTTTCCTTGAACCCATAGGTGGTGTATTGTATTGGATTGCATCCATTTATGATGGTGAACAGACAATCTCGTCAGCAATTTTTAATTGGAAAACTTGCAGGGTATGCCCGTTATTTGTTCTGATAACATGAATTATGCCTTCCTGCATCTACATTGCCATCAAAGTCTCTTCACTCTTTCTAATTATAGGACCCTTTTAAAATCTTTCCCACTTCAGTGGATTCAAACTCAGCCTTAGGGAGTTTCTCAGTTTTGTGTATCTTTTATATTGTTTTTGTGAGATCCCACATCGGTTGGGGAGAAGAACGAAGCATTCTTAACAAGGGTGTGGAAACCTCTCCTTAGTAGACGCATTTTAAAAACCTTGAAGGGAAGCCAAAGATTAATAGTACACTGTAAGGCTGACAAGATAATTTTGTGCTGTAGATCCCGTCTTCTATCAACTTTGTTTTCATCTTTTGTCGCACTGTTGGGTGTATTACCGAGCCGAGTTTCAAGTTTTGTTGTGAGTAAAACTATTGGGAAGTCATGGTCCAGAACTGCAAGTGAGGCTGCTTGCACTTATTTGCTAAAGGTGAAATGAAATCTAATGTATTATTTGTAGTATATGCATTTTTAGTATCCTCTTGAAACTGCTATAAATTTTGATTCTAGGATAATGACTGTCTGTTCTGATATTTGGAATATCATCTTTGTGTTCTACAGTACCATGTCATGCGAAATATTCTATTTATGGCGTTGACAGAGTTCGAGAAGGTATTCACTATGAAAAATCGCGATAGTTAGGCAAACGTGTCGCTCATATCAGACATTTGTATCACTGAAATCTTCGTTTTCGTGGAAGTACACAGCGTAATATCAATATTTAGTCAAATTTCCTCATCTGATTGTGTATGGACATTGTTTAGCTTTCAGAAACACCAGATTGGGCATTCATGAAGAAATCAAGTCGGAAATTATCATTCTTGTTCTGTATGGATGACCACTGGGCTCCAATGCATGTATTTGAGGAGGTAGGACATCGAACCACTTTTCCATTTTATTAATCATTTCTGCTGCATGCATGTAGCTTCGGCGAATATTGTTGTTATGGAGTCTACTGCTTATTTATAACTTAGTCAATGGTTATACATGGTAAAAGTATATATGGTAAATGACATAAACAACTATGTATAGTAAAAAGCTATATATGTTAAAGCAGTTATCCCATTAGGTAGTGCTTTGAAAATGTACTTTCTGCATTCTCCGTATTCTATACTACTCTACATGTATGAAGTCGTCAATATAAACATTCAGCCAATATTCCTTATTACATTTTCTCTCTCCTATTCTTTGTGTTCATCTAGATCGAGTATGCATTGTTGTGCGATTCTAATAATTAGAAAGTACAACGATAGTCGGTTTGAAATATTATTAACTTCGTATTATGCATGGTGAACAACTTCAAATAGCAGGATTGAAAAAGTAATAATTTGAAGCTTAAAACTGTAACTGATGTAGTGAATTCAAGTTCTAGTGTTGTTCTTGTTTGAGTTTTGTTTTCTCCACAGATATCGAAGCAGATCCCGGAAATGGATGTATCAGTTGAAAGGGAAGGTCATACACATGCATTTTGCTGCTCTGAAGCTGGCTCACTCTATATTGCTCAACATGTGGCAAGCTTGATCAAGAATCACATCTCAGATTAAGGTCAGATTCATTCATCATTCCTTCCTTCTTACTCCATTGTAGAGACTTCCTTTGTGTTTTATATCGGATGTTCGTTCTTAACGTTTTGTAGTAGCAGCGCATGCTTTTCGACAATGAACGTCTCCCCATACACTATCATTCCTATAGAAACCTCATGTCGTCGAACAGGAAAATAG ATGGGTCAAGAAGTTCTGAATCCTTTTAGTAGAAGGCGCGCGCAGTTTCGTTTGTGCAATGTATCAGGTTACACTAATGAATTGCTGGAGATTCATGCGGATGATCCATCGTTGCACGTATTGTTCATACCTGGAAATCCAGGGATTGTTTCGTTTTATAAAGATTTTGTTGAATCCCTGTACCAGTTGCTTGGGGGCCGTGTATCTATTACAGCTATTGGTCATCTATCTCAAACGACGAAGGATTGGGAAGGTGGAAGGTTATTTTCATTACAAGAACAAATTGATCATAAGATAGAATTTGTCAGACAAGAATTACAGAATAAAGACATTCCATTGCTACTGGTTGGGCATTCTATTGGATCGTATATCTCGATTGAATTGTACCGCAAGTTCCAAGATCAGGTGGTGTATTGTATTGGATTGCATCCATTTATGATGGTGAACAGACAATCTCGTCAGCAATTTTTAATTGGAAAACTTGCAGGATCCCGTCTTCTATCAACTTTGTTTTCATCTTTTGTCGCACTGTTGGGTGTATTACCGAGCCGAGTTTCAAGTTTTGTTGTGAGTAAAACTATTGGGAAGTCATGGTCCAGAACTGCAAGTGAGGCTGCTTGCACTTATTTGCTAAAGTACCATGTCATGCGAAATATTCTATTTATGGCGTTGACAGAGTTCGAGAAGCTTTCAGAAACACCAGATTGGGCATTCATGAAGAAATCAAGTCGGAAATTATCATTCTTGTTCTGTATGGATGACCACTGGGCTCCAATGCATGTATTTGAGGAGATATCGAAGCAGATCCCGGAAATGGATGTATCAGTTGAAAGGGAAGAATCACATCTCAGATTAAGTAGCAGCGCATGCTTTTCGACAATGAACGTCTCCCCATACACTATCATTCCTATAGAAACCTCATGTCGTCGAACAGGAAAATAG ATGGGTCAAGAAGTTCTGAATCCTTTTAGTAGAAGGCGCGCGCAGTTTCGTTTGTGCAATGTATCAGGTTACACTAATGAATTGCTGGAGATTCATGCGGATGATCCATCGTTGCACGTATTGTTCATACCTGGAAATCCAGGGATTGTTTCGTTTTATAAAGATTTTGTTGAATCCCTGTACCAGTTGCTTGGGGGCCGTGTATCTATTACAGCTATTGGTCATCTATCTCAAACGACGAAGGATTGGGAAGGTGGAAGGTTATTTTCATTACAAGAACAAATTGATCATAAGATAGAATTTGTCAGACAAGAATTACAGAATAAAGACATTCCATTGCTACTGGTTGGGCATTCTATTGGATCGTATATCTCGATTGAATTGTACCGCAAGTTCCAAGATCAGGTGGTGTATTGTATTGGATTGCATCCATTTATGATGGTGAACAGACAATCTCGTCAGCAATTTTTAATTGGAAAACTTGCAGGATCCCGTCTTCTATCAACTTTGTTTTCATCTTTTGTCGCACTGTTGGGTGTATTACCGAGCCGAGTTTCAAGTTTTGTTGTGAGTAAAACTATTGGGAAGTCATGGTCCAGAACTGCAAGTGAGGCTGCTTGCACTTATTTGCTAAAGTACCATGTCATGCGAAATATTCTATTTATGGCGTTGACAGAGTTCGAGAAGCTTTCAGAAACACCAGATTGGGCATTCATGAAGAAATCAAGTCGGAAATTATCATTCTTGTTCTGTATGGATGACCACTGGGCTCCAATGCATGTATTTGAGGAGATATCGAAGCAGATCCCGGAAATGGATGTATCAGTTGAAAGGGAAGAATCACATCTCAGATTAAGTAGCAGCGCATGCTTTTCGACAATGAACGTCTCCCCATACACTATCATTCCTATAGAAACCTCATGTCGTCGAACAGGAAAATAG MGQEVLNPFSRRRAQFRLCNVSGYTNELLEIHADDPSLHVLFIPGNPGIVSFYKDFVESLYQLLGGRVSITAIGHLSQTTKDWEGGRLFSLQEQIDHKIEFVRQELQNKDIPLLLVGHSIGSYISIELYRKFQDQVVYCIGLHPFMMVNRQSRQQFLIGKLAGSRLLSTLFSSFVALLGVLPSRVSSFVVSKTIGKSWSRTASEAACTYLLKYHVMRNILFMALTEFEKLSETPDWAFMKKSSRKLSFLFCMDDHWAPMHVFEEISKQIPEMDVSVEREESHLRLSSSACFSTMNVSPYTIIPIETSCRRTGK Homology
BLAST of Csor.00g032890 vs. ExPASy Swiss-Prot
Match: Q5F477 (Lipid droplet-associated hydrolase OS=Gallus gallus OX=9031 GN=LDAH PE=2 SV=2) HSP 1 Score: 104.8 bits (260), Expect = 1.9e-21 Identity = 75/254 (29.53%), Postives = 127/254 (50.00%), Query Frame = 0
BLAST of Csor.00g032890 vs. ExPASy Swiss-Prot
Match: Q54LL8 (Lipid droplet-associated hydrolase OS=Dictyostelium discoideum OX=44689 GN=DDB_G0286581 PE=3 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 3.5e-20 Identity = 81/269 (30.11%), Postives = 130/269 (48.33%), Query Frame = 0
BLAST of Csor.00g032890 vs. ExPASy Swiss-Prot
Match: Q5HZX7 (Lipid droplet-associated hydrolase OS=Rattus norvegicus OX=10116 GN=Ldah PE=2 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.1e-18 Identity = 73/257 (28.40%), Postives = 124/257 (48.25%), Query Frame = 0
BLAST of Csor.00g032890 vs. ExPASy Swiss-Prot
Match: Q8BVA5 (Lipid droplet-associated hydrolase OS=Mus musculus OX=10090 GN=Ldah PE=1 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.3e-18 Identity = 72/272 (26.47%), Postives = 127/272 (46.69%), Query Frame = 0
BLAST of Csor.00g032890 vs. ExPASy Swiss-Prot
Match: Q9H6V9 (Lipid droplet-associated hydrolase OS=Homo sapiens OX=9606 GN=LDAH PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.4e-16 Identity = 69/256 (26.95%), Postives = 118/256 (46.09%), Query Frame = 0
BLAST of Csor.00g032890 vs. NCBI nr
Match: KAG6595161.1 (Lipid droplet-associated hydrolase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 630 bits (1626), Expect = 5.38e-228 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0
BLAST of Csor.00g032890 vs. NCBI nr
Match: XP_023517069.1 (lipid droplet-associated hydrolase isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 563 bits (1450), Expect = 3.11e-201 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of Csor.00g032890 vs. NCBI nr
Match: XP_023517065.1 (lipid droplet-associated hydrolase isoform X1 [Cucurbita pepo subsp. pepo] >XP_023517066.1 lipid droplet-associated hydrolase isoform X1 [Cucurbita pepo subsp. pepo] >XP_023517067.1 lipid droplet-associated hydrolase isoform X1 [Cucurbita pepo subsp. pepo] >XP_023517068.1 lipid droplet-associated hydrolase isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 563 bits (1450), Expect = 1.41e-200 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of Csor.00g032890 vs. NCBI nr
Match: XP_022963432.1 (lipid droplet-associated hydrolase isoform X2 [Cucurbita moschata]) HSP 1 Score: 551 bits (1419), Expect = 1.65e-196 Identity = 274/279 (98.21%), Postives = 275/279 (98.57%), Query Frame = 0
BLAST of Csor.00g032890 vs. NCBI nr
Match: XP_022972587.1 (lipid droplet-associated hydrolase isoform X2 [Cucurbita maxima]) HSP 1 Score: 550 bits (1416), Expect = 4.72e-196 Identity = 273/279 (97.85%), Postives = 275/279 (98.57%), Query Frame = 0
BLAST of Csor.00g032890 vs. ExPASy TrEMBL
Match: A0A6J1HF89 (lipid droplet-associated hydrolase isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463638 PE=3 SV=1) HSP 1 Score: 551 bits (1419), Expect = 7.98e-197 Identity = 274/279 (98.21%), Postives = 275/279 (98.57%), Query Frame = 0
BLAST of Csor.00g032890 vs. ExPASy TrEMBL
Match: A0A6J1I581 (lipid droplet-associated hydrolase isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471128 PE=3 SV=1) HSP 1 Score: 550 bits (1416), Expect = 2.29e-196 Identity = 273/279 (97.85%), Postives = 275/279 (98.57%), Query Frame = 0
BLAST of Csor.00g032890 vs. ExPASy TrEMBL
Match: A0A6J1HG44 (lipid droplet-associated hydrolase isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463638 PE=3 SV=1) HSP 1 Score: 551 bits (1419), Expect = 3.59e-196 Identity = 274/279 (98.21%), Postives = 275/279 (98.57%), Query Frame = 0
BLAST of Csor.00g032890 vs. ExPASy TrEMBL
Match: A0A6J1I921 (lipid droplet-associated hydrolase isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471128 PE=3 SV=1) HSP 1 Score: 550 bits (1416), Expect = 1.07e-195 Identity = 273/279 (97.85%), Postives = 275/279 (98.57%), Query Frame = 0
BLAST of Csor.00g032890 vs. ExPASy TrEMBL
Match: A0A6J1IV27 (lipid droplet-associated hydrolase-like OS=Cucurbita maxima OX=3661 GN=LOC111478816 PE=3 SV=1) HSP 1 Score: 490 bits (1261), Expect = 9.65e-173 Identity = 241/299 (80.60%), Postives = 263/299 (87.96%), Query Frame = 0
BLAST of Csor.00g032890 vs. TAIR 10
Match: AT3G11620.2 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 349.0 bits (894), Expect = 4.0e-96 Identity = 161/270 (59.63%), Postives = 212/270 (78.52%), Query Frame = 0
BLAST of Csor.00g032890 vs. TAIR 10
Match: AT3G11620.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 349.0 bits (894), Expect = 4.0e-96 Identity = 161/270 (59.63%), Postives = 212/270 (78.52%), Query Frame = 0
BLAST of Csor.00g032890 vs. TAIR 10
Match: AT3G11620.3 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 285.8 bits (730), Expect = 4.2e-77 Identity = 133/221 (60.18%), Postives = 175/221 (79.19%), Query Frame = 0
BLAST of Csor.00g032890 vs. TAIR 10
Match: AT3G11620.4 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 285.8 bits (730), Expect = 4.2e-77 Identity = 133/221 (60.18%), Postives = 175/221 (79.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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