Csor.00g032400 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGCTTGTGCCACTAAGCCCAAGGTTCTTCAGTTTCATTCCCGCCAGTCACCGGAGCCTCCTCCGGAGGATGCTCCGGCCGCCGAAACTAAACGGGACACCGCGGATATCGTCGATGATCACAAGGTGAATTACTCTTAACTCTCCTTCTCTTACCATTTGTTCTTCCAATTACTCTGTTTTTGATTCATAATGCCCCTGATTTCATCATTTTAATGTGTTTTTCCTTTTCCCTCCTTAAAAAATCTGTTTGGATTCTCAGAAAATTGGGGAAAAGAAAATAAACGAAAAAGGGATAATAATTGTGTCGGATCCGGCCTGGAAAAAAGAACGAATCTCGATGAATTTCTGTTCTAATGCATCGCTGCTTGTCTTTTTCCTTTCATTTCCCTGTTTGTTTGTTTTTTTTTAAATTACTTTATTGGACAGTCCAATAAAACCAAGCTTGTTTTGATTTGAATTTTTTGGACTAATCCAAAATCTCGGGTTGGTTGTGTTTGTGACATCGTAAATGTCATATTGTTTTTTTTTTTAATCATTAAAAATAATCATAATTATCCACGGTCATGTTATATTAATAACAAAATTTAATAAAACTTAAATATCAGATAATTATAACTCATTTTCAAAATAATTTAAAGAAAAAATGTATTATATAAGATGGATGTTGGTTTCTACAAATGGGTACGTAATCAAATAAATGGGCTTAAACTGCCCGTTTGAACTCAATTTGGGCCAGCCCATATTCTTAAACCTCGCCCTATATTCTAGGCCCAGCCCACATATGGAGGAAAATAAATAGAGTTTCTTATTATTTGGATGATTGTTATAATACAGAACGAAGGTAAGGAGAAGGCGGCGGCAGCAGCAGAGACCCCACCGGAAACTGAAACTGAAAAAGAAACCAACCCACCGGAGCCGCCACCCTCCGATGATGTAACAGACAAGACAACGGTGGTGGAAACTCCATGTGAGACAAAGAAGGAAAATAACCCAACAAATTGGGAAGCAGAGAAAGAAGTTAAGGTAATTAATTAG ATGGGAGCTTGTGCCACTAAGCCCAAGGTTCTTCAGTTTCATTCCCGCCAGTCACCGGAGCCTCCTCCGGAGGATGCTCCGGCCGCCGAAACTAAACGGGACACCGCGGATATCGTCGATGATCACAAGAACGAAGGTAAGGAGAAGGCGGCGGCAGCAGCAGAGACCCCACCGGAAACTGAAACTGAAAAAGAAACCAACCCACCGGAGCCGCCACCCTCCGATGATGTAACAGACAAGACAACGGTGGTGGAAACTCCATGTGAGACAAAGAAGGAAAATAACCCAACAAATTGGGAAGCAGAGAAAGAAGTTAAGGTAATTAATTAG ATGGGAGCTTGTGCCACTAAGCCCAAGGTTCTTCAGTTTCATTCCCGCCAGTCACCGGAGCCTCCTCCGGAGGATGCTCCGGCCGCCGAAACTAAACGGGACACCGCGGATATCGTCGATGATCACAAGAACGAAGGTAAGGAGAAGGCGGCGGCAGCAGCAGAGACCCCACCGGAAACTGAAACTGAAAAAGAAACCAACCCACCGGAGCCGCCACCCTCCGATGATGTAACAGACAAGACAACGGTGGTGGAAACTCCATGTGAGACAAAGAAGGAAAATAACCCAACAAATTGGGAAGCAGAGAAAGAAGTTAAGGTAATTAATTAG MGACATKPKVLQFHSRQSPEPPPEDAPAAETKRDTADIVDDHKNEGKEKAAAAAETPPETETEKETNPPEPPPSDDVTDKTTVVETPCETKKENNPTNWEAEKEVKVIN Homology
BLAST of Csor.00g032400 vs. NCBI nr
Match: KAG6595113.1 (hypothetical protein SDJN03_11666, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027128.1 hypothetical protein SDJN02_11139 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 211 bits (536), Expect = 1.49e-68 Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0
BLAST of Csor.00g032400 vs. NCBI nr
Match: XP_022963155.1 (uncharacterized protein LOC111463450 isoform X1 [Cucurbita moschata]) HSP 1 Score: 195 bits (496), Expect = 1.65e-62 Identity = 104/109 (95.41%), Postives = 104/109 (95.41%), Query Frame = 0
BLAST of Csor.00g032400 vs. NCBI nr
Match: XP_022963156.1 (uncharacterized protein LOC111463450 isoform X2 [Cucurbita moschata]) HSP 1 Score: 168 bits (425), Expect = 7.68e-52 Identity = 92/109 (84.40%), Postives = 92/109 (84.40%), Query Frame = 0
BLAST of Csor.00g032400 vs. NCBI nr
Match: XP_038881340.1 (early nodulin-75-like isoform X3 [Benincasa hispida]) HSP 1 Score: 59.7 bits (143), Expect = 2.82e-08 Identity = 54/129 (41.86%), Postives = 67/129 (51.94%), Query Frame = 0
BLAST of Csor.00g032400 vs. NCBI nr
Match: XP_008441003.1 (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 [Cucumis melo]) HSP 1 Score: 55.1 bits (131), Expect = 1.29e-06 Identity = 59/163 (36.20%), Postives = 71/163 (43.56%), Query Frame = 0
BLAST of Csor.00g032400 vs. ExPASy TrEMBL
Match: A0A6J1HH69 (uncharacterized protein LOC111463450 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463450 PE=4 SV=1) HSP 1 Score: 195 bits (496), Expect = 8.01e-63 Identity = 104/109 (95.41%), Postives = 104/109 (95.41%), Query Frame = 0
BLAST of Csor.00g032400 vs. ExPASy TrEMBL
Match: A0A6J1HFA8 (uncharacterized protein LOC111463450 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463450 PE=4 SV=1) HSP 1 Score: 168 bits (425), Expect = 3.72e-52 Identity = 92/109 (84.40%), Postives = 92/109 (84.40%), Query Frame = 0
BLAST of Csor.00g032400 vs. ExPASy TrEMBL
Match: A0A1S3B2F3 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485247 PE=4 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 6.23e-07 Identity = 59/163 (36.20%), Postives = 71/163 (43.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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