Csor.00g032060 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g032060
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Ribosomal protein S14
Location	Csor_Chr15: 2223517 .. 2226086 (+)
RNA-Seq Expression	Csor.00g032060
Synteny	Csor.00g032060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATTACCTTATCGTCCTTTGTTTCAAAAATATCAAAAAATATCATTAAATTTTTAAAAGTATTACTTCCAAAAAAAAATTAACACATGAACTTTTAAAAATAATAATAACTTTTAATTTTTTTAAAAAAAATTAAAAAGTCTAAGGGTAATATGGGAAAAGATAAAATATAAATAATTTTGTGAGTATTTTTTTTAATTAATTTAACCTAAAAATATTGTATATAGACGATGGGCCAGCGTTTACCTGGATCCGTCCAATATGAATTGCCACGGCCCGCCGCCCTTAGTTTCCTTCCATTTCCATCGTCGCGCGTTTCTCGTATTCTTCAGACGATTTCGCTCTCTTCCATCGCCCTCACTTTCCTGGTCTGCTCAAAGTAGCCATTGTCGACGCTTTTAAAGCTTTAAGGTTACTCAATATTCCATTTTTTCCCTCCTTTTTTCTGGTTTTCATTACGATTTTTCAGTCTCGGCTTTGAATGGCTCTCCGTTTAGATTGTTGGAACGTGTATCTTTCTAGGATTTTGGATTTGTATTGAAATGATGAAATTCTCGAAATTAGGTCGATCGAAATGACGGAAGACAAGCGGAATATTCTTGACCATTATCGGCGACAGCTTGCTGCGAAGTTTGAGTTGAAACGGAAGCTTTACAAAGCCGTTTGCAACGATCCGAGTCTTCCCAACGATGTGCGTGAAGAGCATCGTTATAAGCTGTCGAAGTTGCCAAGAAATAGTTCGTTCACTCGATTGAGGAATCGCTGCATTTTCACCGGTCGGCCTAGGGGTGTCTACCAGCTTTTCCGTGTTTCTCGTATCGTTTTCCGTGATCTGGCGTCCAAAGGTCTTATAATGGGCGTCAAGAAATCTTCTTGGTAGATATTGGTACGAATTTTTCTTCAATATACATGTTTAGTATATGACAATGAAGGCAGGGATAGGATATATATGTTGTACACATGTTTTAAGCTCCATTTGTTTAGTCTTGAATGCTTGTTTATGACGAATTGATTTGTTTAATGTAGACTAGGTAAACCATTTTCTTGGAACATGGTGTGAGATGGGTTAGCCATAAATATTTGTTTTGATAACTGCTCAAGCTCACTGTCAGTAGATATTATCCGCTTTGCCTCATTATATATAGTTATTAGCCTCACATTTTTAAAATGTGTCTACTAAGTAGAAGTTTTCACACTCTTACAAGGAATGTTTCGTTCCCTCCGACTAACGTGGGATCTCAAAATCCACCCCTTGTGGGGGCTAGCGTCCTCGTTGTCACACTGCCTGATGTCTAGCTCTTATACCATTTTGATACAACTCAAGCCCACCACTAGTAGATATTGCCTGCTTTGGCCCGTTATTGTCAGCATTACGGTTTTAAAACACATTTGCTAGGGAGAAGTTTTCACACCCTTATAAGGAATGTTTCTTTCCCCTCCCCAACCAATATGGGATCTCACAATTCTCCTTTATCAACCTACTTTACCCATGAAAGTTTGGTTTTTACTCTATCGCCAGTGAAATTGATTGTGATGAACATTGGATCCTTATTGTCCGTGCAAAACAGTAGGATTCGGGTCTTTAGCTCAGATATTCTTACTTGAAGCTGCAGTATTTTGCTATAAAAGATTAAGTTTCAGTTGCTGGGTTAGATTTATGTTCACTGACTCAAAGTTTTAACTAGTCAGGTTCAGTAATAAGGAGGAGAGGGACTTTCGCTAGGCCAAATCTACAGATCTGGGTTCCTCTGTAGTTTGTTCATTCCCACTGTAGTACAATATTCTTAAAGCCTTTTATATTTTAAAGATATATATGAACAAGCTAGTAAAAAATGTAACTTGGTTCTGAAATTCTTTATGACTTCCCCAATTTTGTCAAGAAGGAATTTGTATCTCACTTTTCTTTGCTGTCATTTGGGGTATTTGGCTTGAACATAAGAACAGGATCTCTTCGAACAGGTTGAGAAGTTGTGTGGCAAGGTTTAGGATTTGGCTACATTTAATGTCTCCGTTTGGGCGTTTGTCACTCAGTCTATGATCTTGGCAAGGTTTAGGATTTTCTTTTGTGTGCCGTTGTAATGCTTTCATTCTTTTCTCAATAAAACTTTGGTTTCTTACATCTGTTTGATTTATTTGCAATGAAATAATTACCATTTGCACTTCAACCAAAAGTTGGCTTAAGTTTAAGTTTACTGCTAGTAAATATTGTCTGTTTTAGCATGTTTCTTGTGGTTATAACAGTCTAAGTACACACTGCTATTAGATGTTGTCCACTTTAGCCTGTTTCGTGAGGTTGGCGACAATACGTAACAAGCAAAAGCAGAAAATATTTGCTAGCGGTGAACTTGGACTGTTATAACCACAATACTTCAATGACTACACTATCTACATGCTTTGCATTTGTGGTTGAAGTGGGTCACGGAAAATGGTAATTAAACCGTGAGGTTGACGACGATACGTAACGGGTCAAAACGGACAATATCTGTTAGCGGAGGGCTTGGACTGTTACACTTTCGGTTAGTTTTGTTCACGCTGACCGGTTTGATTGTGCATCATGTGCAGGTTGA

mRNA sequence

ATGAAATTACCTTATCACGATTTCGCTCTCTTCCATCGCCCTCACTTTCCTGGTCTGCTCAAAGTAGCCATTGTCGACGCTTTTAAAGCTTTAAGGTCGATCGAAATGACGGAAGACAAGCGGAATATTCTTGACCATTATCGGCGACAGCTTGCTGCGAAGTTTGAGTTGAAACGGAAGCTTTACAAAGCCGTTTGCAACGATCCGAGTCTTCCCAACGATGTGCGTGAAGAGCATCGTTATAAGCTGTCGAAGTTGCCAAGAAATAGTTCGTTCACTCGATTGAGGAATCGCTGCATTTTCACCGGTCGGCCTAGGGGTGTCTACCAGCTTTTCCGTGTTTCTCATATTGGTTGA

Coding sequence (CDS)

ATGAAATTACCTTATCACGATTTCGCTCTCTTCCATCGCCCTCACTTTCCTGGTCTGCTCAAAGTAGCCATTGTCGACGCTTTTAAAGCTTTAAGGTCGATCGAAATGACGGAAGACAAGCGGAATATTCTTGACCATTATCGGCGACAGCTTGCTGCGAAGTTTGAGTTGAAACGGAAGCTTTACAAAGCCGTTTGCAACGATCCGAGTCTTCCCAACGATGTGCGTGAAGAGCATCGTTATAAGCTGTCGAAGTTGCCAAGAAATAGTTCGTTCACTCGATTGAGGAATCGCTGCATTTTCACCGGTCGGCCTAGGGGTGTCTACCAGCTTTTCCGTGTTTCTCATATTGGTTGA

Protein sequence

MKLPYHDFALFHRPHFPGLLKVAIVDAFKALRSIEMTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRCIFTGRPRGVYQLFRVSHIG

Homology

[Close]

BLAST of Csor.00g032060 vs. ExPASy Swiss-Prot
Match: P14875 (Ribosomal protein S14, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPS14 PE=3 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 7.7e-29
Identity = 58/79 (73.42%), Postives = 69/79 (87.34%), Query Frame = 0


Query: 39  DKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNR 98
           +KRNI DH RR LA K+EL+RKLYKA CNDP+LP+D+R++HRYKLSKLPRNSSF R+RNR
Sbjct: 2   EKRNIRDHKRRLLATKYELRRKLYKAFCNDPALPSDMRDKHRYKLSKLPRNSSFARVRNR 61

Query: 99  CIFTGRPRGVYQLFRVSHI 118
           CI TGRPR VY+ FR+S I
Sbjct: 62  CISTGRPRSVYEFFRISRI 80

[Close]

BLAST of Csor.00g032060 vs. ExPASy Swiss-Prot
Match: P05716 (Ribosomal protein S14, mitochondrial OS=Vicia faba OX=3906 GN=RPS14 PE=3 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 9.4e-27
Identity = 57/79 (72.15%), Postives = 67/79 (84.81%), Query Frame = 0


Query: 39  DKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNR 98
           +KRNI DH RR LAAK+EL+RKLYKA C D  LP+D+R++ RYKLSKLPRNSSF R+RNR
Sbjct: 3   EKRNIRDHKRRLLAAKYELRRKLYKAFCKDSDLPSDMRDKLRYKLSKLPRNSSFARVRNR 62

Query: 99  CIFTGRPRGVYQLFRVSHI 118
           CI TGRPR VY+LFR+S I
Sbjct: 63  CISTGRPRSVYELFRISRI 81

[Close]

BLAST of Csor.00g032060 vs. ExPASy Swiss-Prot
Match: P49387 (Ribosomal protein S14, mitochondrial OS=Brassica napus OX=3708 GN=RPS14 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 6.1e-26
Identity = 55/79 (69.62%), Postives = 65/79 (82.28%), Query Frame = 0


Query: 39  DKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNR 98
           +K+N  DH RR LAAKFEL+RKLYKA C DP LP+D+R++HRYKLSKLPRNSSF R+RNR
Sbjct: 3   EKQNSRDHKRRLLAAKFELRRKLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNR 62

Query: 99  CIFTGRPRGVYQLFRVSHI 118
           CI TGRPR V + FR+  I
Sbjct: 63  CISTGRPRSVSEFFRIYRI 81

[Close]

BLAST of Csor.00g032060 vs. ExPASy Swiss-Prot
Match: P26873 (Ribosomal protein S14, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS14 PE=3 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 3.7e-23
Identity = 52/75 (69.33%), Postives = 61/75 (81.33%), Query Frame = 0


Query: 43  ILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRCIFT 102
           I DH RR L AK+ELKR  YKA+C D +LPN +R E+ +KLSKLPRNSS TR+RNRCIFT
Sbjct: 6   IRDHKRRLLVAKYELKRMHYKAICQDRNLPNKIRYEYFFKLSKLPRNSSKTRVRNRCIFT 65

Query: 103 GRPRGVYQLFRVSHI 118
           GRPR VY+LFR+S I
Sbjct: 66  GRPRSVYKLFRISRI 80

[Close]

BLAST of Csor.00g032060 vs. ExPASy Swiss-Prot
Match: P46752 (Ribosomal protein S14, mitochondrial OS=Prototheca wickerhamii OX=3111 GN=RPS14 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 8.6e-12
Identity = 38/73 (52.05%), Postives = 49/73 (67.12%), Query Frame = 0


Query: 45  DHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRCIFTGR 104
           D  RR+L  K+E KR LYKA+ +D +L  D+R     KL+KLPRNSS  R++NRCI TGR
Sbjct: 8   DLKRRKLYKKYESKRLLYKALISDCNLNQDLRFILTQKLNKLPRNSSQVRVKNRCILTGR 67

Query: 105 PRGVYQLFRVSHI 118
              VY+  R+S I
Sbjct: 68  GHSVYKFCRISRI 80

[Close]

BLAST of Csor.00g032060 vs. NCBI nr
Match: KAG6578781.1 (Ribosomal protein S14, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240 bits (613), Expect = 5.17e-80
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MKLPYHDFALFHRPHFPGLLKVAIVDAFKALRSIEMTEDKRNILDHYRRQLAAKFELKRK 60
           MKLPYHDFALFHRPHFPGLLKVAIVDAFKALRSIEMTEDKRNILDHYRRQLAAKFELKRK
Sbjct: 1   MKLPYHDFALFHRPHFPGLLKVAIVDAFKALRSIEMTEDKRNILDHYRRQLAAKFELKRK 60

Query: 61  LYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRCIFTGRPRGVYQLFRVSHIG 118
           LYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRCIFTGRPRGVYQLFRVSHIG
Sbjct: 61  LYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRCIFTGRPRGVYQLFRVSHIG 118

[Close]

BLAST of Csor.00g032060 vs. NCBI nr
Match: XP_023550870.1 (uncharacterized protein LOC111808878 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 164 bits (415), Expect = 4.72e-50
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 36  MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 95
           MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60

Query: 96  RNRCIFTGRPRGVYQLFRVSHI 117
           RNRCIFTGRPRGVYQLFRVS I
Sbjct: 61  RNRCIFTGRPRGVYQLFRVSRI 82

[Close]

BLAST of Csor.00g032060 vs. NCBI nr
Match: XP_022938933.1 (uncharacterized protein LOC111444996 [Cucurbita moschata] >XP_022938934.1 uncharacterized protein LOC111444996 [Cucurbita moschata] >KAG7016311.1 Ribosomal protein S14, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 164 bits (415), Expect = 4.72e-50
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 36  MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 95
           MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60

Query: 96  RNRCIFTGRPRGVYQLFRVSHI 117
           RNRCIFTGRPRGVYQLFRVS I
Sbjct: 61  RNRCIFTGRPRGVYQLFRVSRI 82

[Close]

BLAST of Csor.00g032060 vs. NCBI nr
Match: KAG7032953.1 (Ribosomal protein S14, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162 bits (411), Expect = 1.92e-49
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 36  MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 95
           MTEDKRNILDHYRRQLAAKFELKRKL+KAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MTEDKRNILDHYRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60

Query: 96  RNRCIFTGRPRGVYQLFRVSHI 117
           RNRCIFTGRPRGVYQLFRVS I
Sbjct: 61  RNRCIFTGRPRGVYQLFRVSRI 82

[Close]

BLAST of Csor.00g032060 vs. NCBI nr
Match: XP_038884392.1 (ribosomal protein S14, mitochondrial [Benincasa hispida])

HSP 1 Score: 157 bits (398), Expect = 1.84e-47
Identity = 76/82 (92.68%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 36  MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 95
           M+EDKRNILDHYRRQLAAKFE+KRKLYKA+CNDPSLPNDVRE+HRYKLSKLPRNSSFTRL
Sbjct: 1   MSEDKRNILDHYRRQLAAKFEVKRKLYKAICNDPSLPNDVREDHRYKLSKLPRNSSFTRL 60

Query: 96  RNRCIFTGRPRGVYQLFRVSHI 117
           RNRCIFTGRPR VYQLFRVS I
Sbjct: 61  RNRCIFTGRPRAVYQLFRVSRI 82

[Close]

BLAST of Csor.00g032060 vs. ExPASy TrEMBL
Match: A0A6J1FKA4 (uncharacterized protein LOC111444996 OS=Cucurbita moschata OX=3662 GN=LOC111444996 PE=3 SV=1)

HSP 1 Score: 164 bits (415), Expect = 2.28e-50
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0


Query: 36  MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 95
           MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 60

Query: 96  RNRCIFTGRPRGVYQLFRVSHI 117
           RNRCIFTGRPRGVYQLFRVS I
Sbjct: 61  RNRCIFTGRPRGVYQLFRVSRI 82

[Close]

BLAST of Csor.00g032060 vs. ExPASy TrEMBL
Match: A0A6J1C264 (uncharacterized protein LOC111006733 OS=Momordica charantia OX=3673 GN=LOC111006733 PE=3 SV=1)

HSP 1 Score: 154 bits (390), Expect = 1.47e-46
Identity = 77/82 (93.90%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 36  MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 95
           M+ DKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREE RYKLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEQRYKLSKLPRNSSFTRL 60

Query: 96  RNRCIFTGRPRGVYQLFRVSHI 117
           RNRCIFTGRPR VYQLFRVS I
Sbjct: 61  RNRCIFTGRPRAVYQLFRVSRI 82

[Close]

BLAST of Csor.00g032060 vs. ExPASy TrEMBL
Match: A0A5D3CKB3 (Ribosomal protein S14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00590 PE=3 SV=1)

HSP 1 Score: 149 bits (375), Expect = 2.85e-44
Identity = 72/82 (87.80%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 36  MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 95
           M+ DKRNILD+YRRQLAAKFE+KR L+KA+CNDPSLP DVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60

Query: 96  RNRCIFTGRPRGVYQLFRVSHI 117
           RNRCIFTGRPRGVYQLFR+S I
Sbjct: 61  RNRCIFTGRPRGVYQLFRMSRI 82

[Close]

BLAST of Csor.00g032060 vs. ExPASy TrEMBL
Match: A0A1S4E169 (ribosomal protein S14, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496488 PE=3 SV=1)

HSP 1 Score: 149 bits (375), Expect = 2.85e-44
Identity = 72/82 (87.80%), Postives = 78/82 (95.12%), Query Frame = 0


Query: 36  MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 95
           M+ DKRNILD+YRRQLAAKFE+KR L+KA+CNDPSLP DVREEHRYKLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDNYRRQLAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRL 60

Query: 96  RNRCIFTGRPRGVYQLFRVSHI 117
           RNRCIFTGRPRGVYQLFR+S I
Sbjct: 61  RNRCIFTGRPRGVYQLFRMSRI 82

[Close]

BLAST of Csor.00g032060 vs. ExPASy TrEMBL
Match: A0A0A0LSR8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G386130 PE=3 SV=1)

HSP 1 Score: 146 bits (368), Expect = 3.31e-43
Identity = 71/82 (86.59%), Postives = 77/82 (93.90%), Query Frame = 0


Query: 36  MTEDKRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRL 95
           M+ DKRNILD+YRRQLAAKFELKR L+KA+CNDPSLP D+REEHR KLSKLPRNSSFTRL
Sbjct: 1   MSGDKRNILDNYRRQLAAKFELKRNLFKAICNDPSLPKDIREEHRNKLSKLPRNSSFTRL 60

Query: 96  RNRCIFTGRPRGVYQLFRVSHI 117
           RNRCIFTGRPRGVYQLFR+S I
Sbjct: 61  RNRCIFTGRPRGVYQLFRMSRI 82

[Close]

BLAST of Csor.00g032060 vs. TAIR 10
Match: AT2G34520.1 (mitochondrial ribosomal protein S14 )

HSP 1 Score: 117.1 bits (292), Expect = 9.7e-27
Identity = 54/78 (69.23%), Postives = 66/78 (84.62%), Query Frame = 0


Query: 40  KRNILDHYRRQLAAKFELKRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRC 99
           KRN  DH RR LAA+FEL+RKLYKA C DP LP+++R+++RYKLSKLPRNS+F R+RNRC
Sbjct: 68  KRNSADHRRRLLAARFELRRKLYKAFCKDPDLPSEMRDKNRYKLSKLPRNSAFARIRNRC 127

Query: 100 IFTGRPRGVYQLFRVSHI 118
           +FTGR R V +LFRVS I
Sbjct: 128 VFTGRSRSVTELFRVSRI 145

[Close]

BLAST of Csor.00g032060 vs. TAIR 10
Match: ATCG00330.1 (chloroplast ribosomal protein S14 )

HSP 1 Score: 42.0 bits (97), Expect = 4.0e-04
Identity = 28/69 (40.58%), Postives = 38/69 (55.07%), Query Frame = 0


Query: 48  RRQLAAKFEL-KRKLYKAVCNDPSLPNDVREEHRYKLSKLPRNSSFTRLRNRCIFTGRPR 107
           R++L  K+ L +R   K +   PSL    + +   KL   PRNS+ TRL  RC  TGRPR
Sbjct: 13  RQKLEKKYHLIRRSSKKEISKIPSLSE--KWKIHGKLQSPPRNSAPTRLHRRCFSTGRPR 72

Query: 108 GVYQLFRVS 116
             Y+ F +S
Sbjct: 73  ANYRDFGLS 79

The following BLAST results are available for this feature:

BLAST of Csor.00g032060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14875	7.7e-29	73.42	Ribosomal protein S14, mitochondrial OS=Oenothera berteroana OX=3950 GN=RPS14 PE...	[more]
P05716	9.4e-27	72.15	Ribosomal protein S14, mitochondrial OS=Vicia faba OX=3906 GN=RPS14 PE=3 SV=2	[more]
P49387	6.1e-26	69.62	Ribosomal protein S14, mitochondrial OS=Brassica napus OX=3708 GN=RPS14 PE=3 SV=...	[more]
P26873	3.7e-23	69.33	Ribosomal protein S14, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS14 P...	[more]
P46752	8.6e-12	52.05	Ribosomal protein S14, mitochondrial OS=Prototheca wickerhamii OX=3111 GN=RPS14 ...	[more]

BLAST of Csor.00g032060 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6578781.1	5.17e-80	100.00	Ribosomal protein S14, mitochondrial, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_023550870.1	4.72e-50	98.78	uncharacterized protein LOC111808878 [Cucurbita pepo subsp. pepo]	[more]
XP_022938933.1	4.72e-50	98.78	uncharacterized protein LOC111444996 [Cucurbita moschata] >XP_022938934.1 unchar...	[more]
KAG7032953.1	1.92e-49	97.56	Ribosomal protein S14, mitochondrial, partial [Cucurbita argyrosperma subsp. arg...	[more]
XP_038884392.1	1.84e-47	92.68	ribosomal protein S14, mitochondrial [Benincasa hispida]	[more]

BLAST of Csor.00g032060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FKA4	2.28e-50	98.78	uncharacterized protein LOC111444996 OS=Cucurbita moschata OX=3662 GN=LOC1114449...	[more]
A0A6J1C264	1.47e-46	93.90	uncharacterized protein LOC111006733 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A5D3CKB3	2.85e-44	87.80	Ribosomal protein S14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold30...	[more]
A0A1S4E169	2.85e-44	87.80	ribosomal protein S14, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103496488 PE=...	[more]
A0A0A0LSR8	3.31e-43	86.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G386130 PE=3 SV=1	[more]

BLAST of Csor.00g032060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34520.1	9.7e-27	69.23	mitochondrial ribosomal protein S14	[more]
ATCG00330.1	4.0e-04	40.58	chloroplast ribosomal protein S14	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001209	Ribosomal protein S14	PFAM	PF00253	Ribosomal_S14	coord: 82..116 e-value: 1.5E-12 score: 47.1
IPR001209	Ribosomal protein S14	PANTHER	PTHR19836	30S RIBOSOMAL PROTEIN S14	coord: 36..117
None	No IPR available	GENE3D	1.10.287.1480		coord: 38..118 e-value: 4.5E-26 score: 93.0
None	No IPR available	PANTHER	PTHR19836:SF30	RIBOSOMAL PROTEIN S14	coord: 36..117
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 43..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g032060.m01	Csor.00g032060.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0015935	small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome