Csor.00g031860 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g031860
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr15: 2089427 .. 2090596 (+)
RNA-Seq ExpressionCsor.00g031860
SyntenyCsor.00g031860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATGTATGCAGTATCCGTCTCATAAATTGCGAACCCAAGGACCGAAATTTGCAGTGAGTTGTCATGGGGAAGGCCATAGAATGCCTCAGGCCAAGGATCAGAAAAAAAAGGAGAAAGAAGAGCTGAGAAAAGACAAGATAGTGGAGATGGGTGCCATTTTTTTTCCAAAGTGCTGCAAGTTAATGCAGTTGTTTCACTTATTCTTTATACTTCTCTGGAGTGGGCGAGTTTATATAGAGCTGAAGGAGATTGAAGCTCACTGAAATATCTAGTTATAAACCTTAATGACGAGTTACTTTCACTAAACCTCTGGGTCCTATGCCCTGACCCAGAAAGCAGGAGGAATAATATTTTGTGTTTGGAAAGAATTTGATATAATGCAATTATGCAGGCGAGTCTTAGAATTCCAAACTCAAGTGAACCATAGTCGTGGTTGCTTGTACTTGAATATTTTGGGATTATTGTGGAGAAAAGAAAAAGAAGAATCACAACAAACAAGAAAGGAAAAAAGAAGACCGGGAATGGGACCAGTCATGTCATAGATATTTGGACTCCTGTAGTTCGTTGTTGAGTGAAAGGCTAAATAAAGAATCAAATGTCGGAAGCTGGCTGTGGAATGATGAGCCAGTTGAAGGTAATCTTTGTTTCAACTCCTAAATTATGCATTTTCCACTTATAGATTATAAGGTGCTTTGTCACTCTTTTATCTTTGATCTGGTCTTTTGTGAATCAATTTGTGCTTTGAAGTGTTCGGTAACTTTTAAGTTTTAATTTTTTTACGAGAAATATAAAAAGTGGTCTTTGATAGTAAAAAATATAGTTGATGGGTATTTAAACTTTCAATGTCATATTTAATATGCCTCTAAGACTAATATCTTTTTCGGAAAAGTTCCGCTTATAGTCCTCGAGGATTGTGTTAGTTTGCATTTGAGTTACTGAGTTTTCAAACTCAACAATTTTGCTCTTGAAGTTTGCATTTAGTTCCATCTTGATCCTTCCATTAAGTTTTCCAATAATTACTAGCATAAAAGCTTACCTAACATTTATTTTTTATTAGAAAATTATATTATTTATTTATTTTTAATTAAAAAAAATTCTTTCTTCCTTTTCCCTTTCCCTGCTTGGGCTAAGGGAATCTGAGGACACCAACTCCTAGGCATCATTGA

mRNA sequence

ATGACATGTATGCAGTATCCGTCTCATAAATTGCGAACCCAAGGACCGAAATTTGCAGTGAGTTGTCATGGGGAAGGCCATAGAATGCCTCAGGCCAAGGATCAGAAAAAAAAGGAGAAAGAAGAGCTGAGAAAAGACAAGATAGTGGAGATGGGTGCCATTTTTTTTCCAAATTCGTTGTTGAGTGAAAGGCTAAATAAAGAATCAAATGTCGGAAGCTGGCTGTGGAATGATGAGCCAGTTGAAGGGAATCTGAGGACACCAACTCCTAGGCATCATTGA

Coding sequence (CDS)

ATGACATGTATGCAGTATCCGTCTCATAAATTGCGAACCCAAGGACCGAAATTTGCAGTGAGTTGTCATGGGGAAGGCCATAGAATGCCTCAGGCCAAGGATCAGAAAAAAAAGGAGAAAGAAGAGCTGAGAAAAGACAAGATAGTGGAGATGGGTGCCATTTTTTTTCCAAATTCGTTGTTGAGTGAAAGGCTAAATAAAGAATCAAATGTCGGAAGCTGGCTGTGGAATGATGAGCCAGTTGAAGGGAATCTGAGGACACCAACTCCTAGGCATCATTGA

Protein sequence

MTCMQYPSHKLRTQGPKFAVSCHGEGHRMPQAKDQKKKEKEELRKDKIVEMGAIFFPNSLLSERLNKESNVGSWLWNDEPVEGNLRTPTPRHH
Homology
[Close]
BLAST of Csor.00g031860 vs. NCBI nr
Match: KAG6578761.1 (hypothetical protein SDJN03_23209, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 198 bits (504), Expect = 3.51e-64
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MTCMQYPSHKLRTQGPKFAVSCHGEGHRMPQAKDQKKKEKEELRKDKIVEMGAIFFPNSL 60
          MTCMQYPSHKLRTQGPKFAVSCHGEGHRMPQAKDQKKKEKEELRKDKIVEMGAIFFPNSL
Sbjct: 1  MTCMQYPSHKLRTQGPKFAVSCHGEGHRMPQAKDQKKKEKEELRKDKIVEMGAIFFPNSL 60

Query: 61 LSERLNKESNVGSWLWNDEPVEGNLRTPTPRHH 93
          LSERLNKESNVGSWLWNDEPVEGNLRTPTPRHH
Sbjct: 61 LSERLNKESNVGSWLWNDEPVEGNLRTPTPRHH 93

The following BLAST results are available for this feature:
BLAST of Csor.00g031860 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g031860 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6578761.13.51e-64100.00hypothetical protein SDJN03_23209, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g031860 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g031860 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g031860.m01Csor.00g031860.m01mRNA