Csor.00g031330 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g031330
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr16: 6203589 .. 6204814 (+)
RNA-Seq ExpressionCsor.00g031330
SyntenyCsor.00g031330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGTATTTAAGAATTTAGACCCTGTTACATCCAATGTGGACTCGGGGAATGAGGGGCAGCCTATAGAAGAAACTGCTTCAGCAGAGGCGGTTCAGGAGCCTGTTGCTCAGTCGGCATCTAGAGATCAACTGACTGTTGTGATTACTTTAGAGGCATTGCAATCATTGATTGAGAGTCGAGTAGATCAGGCGGTGCAAAGCCGAGTGGATCAAGCGGTACAGGCAACCCTTGCTGGCCTTGGAAGCCAGACGGCTCCAACAGCACTTGTATCTGGCCAAGCGACCTTAGTGTCTGAAGCACCAGGAGTAGGTGTTCAGACAGCAATACCTCCAAACAAGGTTGACAGAGCTACCTGGTATAGTAGTGGTGACAGAGATACCACTACGGGTAGTAACTTATGGGCGACAATGTATGACGGAGGAAAGTGAGTACATACGAGATTTTATGAAACTTGACCCGCCAACATTTGGAGGAAAGGGGACTGATCCTGAGGCAGCTGAATGGTGGTTAGAATGTATTGAAACAAAGTTTACATTCTACAACTGCCCGGAGAATCATAAGGTGCTGTGTGCTACGTATTTGTTGGAGGGACCAGCTCATTTTTGGTGGAAATCAAAGAAGCCGAAGATGGAGGCTGGTGGAGCCTCAATCACATGGGCGGCCTTCAAACATGAGTTTTGTGAGAAATACTATCCTGCTCTAGCAAGATTGCAAAATCGAAAGGCCTTTATGCAACTGGAACAAGGTAATATGTCAGTAGAGGAGTATGAGACAGAATTCACACGATTATCCAGATTTGTTCCTCTTATGGTTGCTATTGAGGAAGAGAAGACGGATCTCTTTATCTAAGGTTTGAGGCAAGAGATACAGGGATCTGTGTCTACCCATGCTTCTCAAGATTTCGTTACGGCTTATAATGCTGCGGTGAAATTAGATGCTACCACCCCAAGGAGTAATCAGGGTTCTAGCAATCAGATGCGACCAAGTGGTAAACAAAAATCTACTCAAATATCATCGGGTTCGCAACAGCAGGCGGTATTGCGACGAGTTGATTGTCGACCTTCCTCATGTGATGGGAAGGCAATTTGCAATTAAGTGCGGGTTAACTCATGTAGGATCTTGTAATGTTGCAAACAAGACATATTATAACTATGGTAAGACTGGTCATCTCGCTAGAGTATGTCGTAGTGCAAAGAATCCTAATGTGATACACCCCGAGTGA

mRNA sequence

ATGGTAGTATTTAAGAATTTAGACCCTGTTACATCCAATGTGGACTCGGGGAATGAGGGGCAGCCTATAGAAGAAACTGCTTCAGCAGAGGCGGTTCAGGAGCCTGTTGCTCAGTCGGCATCTAGAGATCAACTGACTGTTGTGATTACTTTAGAGGCATTGCAATCATTGATTGAGAGTCGAGTAGATCAGGCGGTGCAAAGCCGAGTGGATCAAGCGGTACAGGCAACCCTTGCTGGCCTTGGAAGCCAGACGGCTCCAACAGCACTTGTATCTGGCCAAGCGACCTTAGTGTCTGAAGCACCAGGAGTAGGTGTTCAGACAGCAATACCTCCAAACAAGGTTGACAGAGCTACCTGGCGGTATTGCGACGAGTTGATTGTCGACCTTCCTCATGTGATGGGAAGGCAATTTGCAATTAAGTGCGGGTTAACTCATGTAGGATCTTGTAATGTTGCAAACAAGACATATTATAACTATGGTAAGACTGGTCATCTCGCTAGAGTATGTCGTAGTGCAAAGAATCCTAATGTGATACACCCCGAGTGA

Coding sequence (CDS)

ATGGTAGTATTTAAGAATTTAGACCCTGTTACATCCAATGTGGACTCGGGGAATGAGGGGCAGCCTATAGAAGAAACTGCTTCAGCAGAGGCGGTTCAGGAGCCTGTTGCTCAGTCGGCATCTAGAGATCAACTGACTGTTGTGATTACTTTAGAGGCATTGCAATCATTGATTGAGAGTCGAGTAGATCAGGCGGTGCAAAGCCGAGTGGATCAAGCGGTACAGGCAACCCTTGCTGGCCTTGGAAGCCAGACGGCTCCAACAGCACTTGTATCTGGCCAAGCGACCTTAGTGTCTGAAGCACCAGGAGTAGGTGTTCAGACAGCAATACCTCCAAACAAGGTTGACAGAGCTACCTGGCGGTATTGCGACGAGTTGATTGTCGACCTTCCTCATGTGATGGGAAGGCAATTTGCAATTAAGTGCGGGTTAACTCATGTAGGATCTTGTAATGTTGCAAACAAGACATATTATAACTATGGTAAGACTGGTCATCTCGCTAGAGTATGTCGTAGTGCAAAGAATCCTAATGTGATACACCCCGAGTGA

Protein sequence

MVVFKNLDPVTSNVDSGNEGQPIEETASAEAVQEPVAQSASRDQLTVVITLEALQSLIESRVDQAVQSRVDQAVQATLAGLGSQTAPTALVSGQATLVSEAPGVGVQTAIPPNKVDRATWRYCDELIVDLPHVMGRQFAIKCGLTHVGSCNVANKTYYNYGKTGHLARVCRSAKNPNVIHPE
Homology
BLAST of Csor.00g031330 vs. NCBI nr
Match: KAG6577467.1 (hypothetical protein SDJN03_25041, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 357 bits (917), Expect = 2.76e-124
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0

Query: 1   MVVFKNLDPVTSNVDSGNEGQPIEETASAEAVQEPVAQSASRDQLTVVITLEALQSLIES 60
           MVVFKNLDPVTSNVDSGNEGQPIEETASAEAVQEPVAQSASRDQLTVVITLEALQSLIES
Sbjct: 1   MVVFKNLDPVTSNVDSGNEGQPIEETASAEAVQEPVAQSASRDQLTVVITLEALQSLIES 60

Query: 61  RVDQAVQSRVDQAVQATLAGLGSQTAPTALVSGQATLVSEAPGVGVQTAIPPNKVDRATW 120
           RVDQAVQSRVDQAVQATLAGLGSQTAPTALVSGQATLVSEAPGVGVQTAIPPNKVDRATW
Sbjct: 61  RVDQAVQSRVDQAVQATLAGLGSQTAPTALVSGQATLVSEAPGVGVQTAIPPNKVDRATW 120

Query: 121 RYCDELIVDLPHVMGRQFAIKCGLTHVGSCNVANKTYYNYGKTGHLARVCRSAKNPNVIH 180
           RYCDELIVDLPHVMGRQFAIKCGLTHVGSCNVANKTYYNYGKTGHLARVCRSAKNPNVIH
Sbjct: 121 RYCDELIVDLPHVMGRQFAIKCGLTHVGSCNVANKTYYNYGKTGHLARVCRSAKNPNVIH 180

Query: 181 PE 182
           PE
Sbjct: 181 PE 182

BLAST of Csor.00g031330 vs. NCBI nr
Match: KAG6571292.1 (hypothetical protein SDJN03_30207, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 182 bits (461), Expect = 8.18e-55
Identity = 99/115 (86.09%), Postives = 103/115 (89.57%), Query Frame = 0

Query: 1   MVVFKNLDPVTSNVDSGNEGQPIEETASAEAVQEPVAQSASRDQLTVVITLEALQSLIES 60
           MVVFKNLDP TSNVD GNEGQP+EETA AEAV EP AQSASRDQ TVVITLEALQSLIES
Sbjct: 1   MVVFKNLDPGTSNVDLGNEGQPVEETAPAEAVPEPAAQSASRDQPTVVITLEALQSLIES 60

Query: 61  RVDQAVQSRVDQAVQATLAGLGSQTAPTALVSGQATLVSEAPGVGVQTAIPPNKV 115
           RVDQA+QSRVDQAVQA LAGLGSQ APTA VSGQ TLVSEAPGVGVQT IPP ++
Sbjct: 61  RVDQAMQSRVDQAVQAALAGLGSQAAPTAPVSGQTTLVSEAPGVGVQTVIPPTRL 115

BLAST of Csor.00g031330 vs. NCBI nr
Match: KAG6571276.1 (hypothetical protein SDJN03_30191, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177 bits (449), Expect = 3.70e-53
Identity = 97/115 (84.35%), Postives = 101/115 (87.83%), Query Frame = 0

Query: 1   MVVFKNLDPVTSNVDSGNEGQPIEETASAEAVQEPVAQSASRDQLTVVITLEALQSLIES 60
           MVVFKNLDP TSNVD GNEGQP+E TA AEAV EP AQSASRDQ TVVITLEALQSLIES
Sbjct: 6   MVVFKNLDPGTSNVDLGNEGQPVEGTAPAEAVPEPAAQSASRDQPTVVITLEALQSLIES 65

Query: 61  RVDQAVQSRVDQAVQATLAGLGSQTAPTALVSGQATLVSEAPGVGVQTAIPPNKV 115
           RVDQA+QSRVDQAVQA LAG GSQ APTA VSGQ TLVSEAPGVGVQT IPP ++
Sbjct: 66  RVDQAMQSRVDQAVQAALAGFGSQAAPTAPVSGQTTLVSEAPGVGVQTVIPPTQL 120

BLAST of Csor.00g031330 vs. NCBI nr
Match: XP_023521106.1 (uncharacterized protein LOC111784731 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177 bits (448), Expect = 6.97e-53
Identity = 96/115 (83.48%), Postives = 102/115 (88.70%), Query Frame = 0

Query: 1   MVVFKNLDPVTSNVDSGNEGQPIEETASAEAVQEPVAQSASRDQLTVVITLEALQSLIES 60
           MVVFKNLDP TSNVD GNEGQP+E TA AEA+ EP AQSASRDQ TVVITLEALQSLIES
Sbjct: 1   MVVFKNLDPGTSNVDLGNEGQPVEGTAPAEAIPEPAAQSASRDQPTVVITLEALQSLIES 60

Query: 61  RVDQAVQSRVDQAVQATLAGLGSQTAPTALVSGQATLVSEAPGVGVQTAIPPNKV 115
           +VDQAVQSRVDQAVQA LAGLGSQ APTA VSGQ TLVS+APGVGVQT IPP ++
Sbjct: 61  QVDQAVQSRVDQAVQAALAGLGSQAAPTAPVSGQTTLVSKAPGVGVQTVIPPTRL 115

BLAST of Csor.00g031330 vs. NCBI nr
Match: KAG6590425.1 (hypothetical protein SDJN03_15848, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 175 bits (443), Expect = 3.01e-52
Identity = 95/115 (82.61%), Postives = 100/115 (86.96%), Query Frame = 0

Query: 1   MVVFKNLDPVTSNVDSGNEGQPIEETASAEAVQEPVAQSASRDQLTVVITLEALQSLIES 60
           M VFKNLDP TSNVD GNEGQP+EETA AEAV EP AQSASRDQ T+VITLEALQSLIES
Sbjct: 6   MDVFKNLDPGTSNVDLGNEGQPVEETAPAEAVPEPAAQSASRDQPTIVITLEALQSLIES 65

Query: 61  RVDQAVQSRVDQAVQATLAGLGSQTAPTALVSGQATLVSEAPGVGVQTAIPPNKV 115
           RVDQA+QSRVDQAVQA LAGLGSQ APTALVSGQ TLVSE P VGVQT  PP ++
Sbjct: 66  RVDQAMQSRVDQAVQAALAGLGSQAAPTALVSGQTTLVSETPEVGVQTVTPPTRL 120

BLAST of Csor.00g031330 vs. ExPASy TrEMBL
Match: A0A6J1EZK0 (uncharacterized protein LOC111440728 OS=Cucurbita moschata OX=3662 GN=LOC111440728 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.55e-15
Identity = 55/127 (43.31%), Postives = 68/127 (53.54%), Query Frame = 0

Query: 59  ESRVDQAVQSRVDQAVQATLAGLGSQ---TAPTALVSGQATLVSEAPGVGVQTAIPPNKV 118
           E + D  +Q  + Q +Q +++   SQ   TA  A V   A+      G   Q  +P  +V
Sbjct: 161 EEKTDLFIQG-LRQEIQGSVSAHASQDFVTAYNAAVKLDASTPRNNQGSSSQQTVP-QRV 220

Query: 119 DRATWRYCDELIVDLPHVMGRQFAIKCGLTHVGSCNVANKTYYNYGKTGHLARVCRSAKN 178
           DR    Y  E         GR    KCGLTH GSCN A+K  YN GKTGHLARVCRSAKN
Sbjct: 221 DRRP--YSGE---------GRAGCSKCGLTHAGSCNAADKICYNCGKTGHLARVCRSAKN 274

Query: 179 PNVIHPE 182
           PN++ PE
Sbjct: 281 PNMMRPE 274

BLAST of Csor.00g031330 vs. ExPASy TrEMBL
Match: A0A6J1HHR1 (uncharacterized protein LOC111463090 OS=Cucurbita moschata OX=3662 GN=LOC111463090 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.40e-14
Identity = 49/103 (47.57%), Postives = 56/103 (54.37%), Query Frame = 0

Query: 80  GLGSQTAPTALVSGQATLVSEAPGVGVQTAIPPNKVDRATWRYCDELIVDLPHVMGRQFA 139
           G  SQ  P    SG+   +  + G   QT   P +VDR    Y  E         GR   
Sbjct: 112 GSSSQVRP----SGKRKFLQISTGSQQQTV--PQRVDRRL--YSGE---------GRAGC 171

Query: 140 IKCGLTHVGSCNVANKTYYNYGKTGHLARVCRSAKNPNVIHPE 182
            KCGLTH GSCN  +K  YN GKTGHLARVCRSAKNPN++ PE
Sbjct: 172 SKCGLTHAGSCNATDKICYNCGKTGHLARVCRSAKNPNMMRPE 197

BLAST of Csor.00g031330 vs. ExPASy TrEMBL
Match: A0A6J1EQX1 (uncharacterized protein LOC111436980 OS=Cucurbita moschata OX=3662 GN=LOC111436980 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 7.45e-14
Identity = 40/49 (81.63%), Postives = 42/49 (85.71%), Query Frame = 0

Query: 67  QSRVDQAVQATLAGLGSQTAPTALVSGQATLVSEAPGVGVQTAIPPNKV 115
           QSRVDQAVQA LAGLGSQ APTA V GQ TLVSEAPGVGVQT IPP ++
Sbjct: 2   QSRVDQAVQAALAGLGSQAAPTAPVLGQTTLVSEAPGVGVQTVIPPTRL 50

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6577467.12.76e-124100.00hypothetical protein SDJN03_25041, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6571292.18.18e-5586.09hypothetical protein SDJN03_30207, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6571276.13.70e-5384.35hypothetical protein SDJN03_30191, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023521106.16.97e-5383.48uncharacterized protein LOC111784731 [Cucurbita pepo subsp. pepo][more]
KAG6590425.13.01e-5282.61hypothetical protein SDJN03_15848, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A6J1EZK02.55e-1543.31uncharacterized protein LOC111440728 OS=Cucurbita moschata OX=3662 GN=LOC1114407... [more]
A0A6J1HHR13.40e-1447.57uncharacterized protein LOC111463090 OS=Cucurbita moschata OX=3662 GN=LOC1114630... [more]
A0A6J1EQX17.45e-1481.63uncharacterized protein LOC111436980 OS=Cucurbita moschata OX=3662 GN=LOC1114369... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..23

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g031330.m01Csor.00g031330.m01mRNA