Csor.00g031210 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g031210
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr16: 6400730 .. 6402546 (+)
RNA-Seq ExpressionCsor.00g031210
SyntenyCsor.00g031210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCCCAATTTGTTTCCATCCACGTCTCATCCTAACACACACACACATATATAATATTATTGGATTTACTAGAAATAAATGAAGAATTTTAAGAGAATAACATCGAAAGATTTTCTGTGTATAGTTTATTTTTAATGTTCATTATTGTTTATTTTTCTTAAACAAGATGTCAACAATGGTTTATTTAAAGACATGATTAAGCGTTGAGAAGCACAAACGTGAAGAATTCAAAAATTAAAATTAAAATTATTTATTATTTATAATTATTTACACAAAAAATATTAGATATTTTAAAGCTTATCCAAACAAATAAAACCACACTTGTTCTTGCTGAAGAAGAAAAGAATCTTCTATCATCGCCGCACACGTGTACGGTAGATATTCGAAGCAGTGCCAGTACAAAGCTGTCTACTTATTTGTCAAAAACGATAAGAGAAGAAATTGCAGTTCCTTGCGTATCTACCGTTGAAAACTTTCTGAAACTCTCCCCTTGGTTCTTGTCTTCAAGGTGAAACGCTCCTCCCTTCTCTCTGATTTTTCTTTTTGTTTTTTGCTTCGATCTTTTGTTTCTTTTTAAATCTCTTTCATCGTCGATCGCGTTCTGTTTTGGTGTCGAATTCTGTACTGATATTGCTTCGTTTATTCTGTTATCTTAATGTTCTTTTATTGCTTCATTTAGATCTTTGGAGCATTTGATTTTTAGATACCTATACTTCTTGATCGTTGAGTGTTGAGTGTGCAGTTAATTCCAACACTGATTTACTTCGATTTTGCTGATTTTTCCCCATTTTCCATGTTTTCGCCTGTTGAAAGGACTTAATCGTGGCTACGTGTTCTTTGTTAGACCACTGATTAAATTTTCTTTTCCAAAACTTGACTTGTTGGATGGACTTCCTTCTGTAGAGTCGTGCTGTATTCTGTAATCAACCTTTTGGATAGTATACTTAGCTTCTGGAATTAAATAGCTTACAGTTTGTGGGAATCTTGAGAAGCGTGTGCATATGTAATTTGTATGTATGTGTGCAAGCCAGATTGTACGTGAATATTCTGTGGTTTGTCCTGACTCTGCTGATTGCAAGCATGGAACTATCGATCAAATGTGATTTTCCCCTTGGCACTGTTCTTTGAAATGAGTCTGGTTTCCTCAGTAAACAATCTCTTAAATAAAAAACTAAATAAAACAAATGAAAGAAATTATTGGGTTTGCAAATATTATTAAACCATCTTATCCAAACCTCAATTTCTTTAGTTTTTCATTATCTCTGTTGAGGATGGTTGGTGGGGAGTCCCACCTTGGCTAATTAAGGAGATGATCTTGAGTTTATAAGTAAGGAATTCATCTCCATTGATACGAGGCCTTTTGGGAAAACAAAAAATAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGGTTCGTGATTCCTAACAATCTCTATATTATATAAGGTGCTTATTATATATATGTGTGTGTGTCTGTGTCTGTGTGTCACCAAACAAAGCTTGCACATTTTGCGTTGCCCAGGCTTGCCTCGACAGACTGCTGCACTTGAGTGCGGTTTGTATTTTAAGTGACAGTAAATGACTTCTGCTTTGACATATCGATGATTAAATAATCATAAAGTTCTGTGATTTTTTTTTTTTTTTTTTTTTTTTTTGAAATGTGAAAGTTGGCATATAGATATTAATTAGTGTGCTAACATTTTGCATCGTGTAATGAATTGTTGCCGTTGTGACTACCATTGGACTCTAATATAGCGTGTTCTCAATTGACAGTGAGCAACATGGGTACGAGACTTAA

mRNA sequence

ATGACCCCAATTTGTTTCCATCCACAAGAAAAGAATCTTCTATCATCGCCGCACACGTGTACGGTAGATATTCGAAGCAGTGCCAGTACAAAGCTGTCTACTTATTTGTCAAAAACGATAAGAGAAGAAATTGCAGTTCCTTGCGTATCTACCGTTGAAAACTTTCTGAAACTCTCCCCTTGGTTCTTGTCTTCAAGTGAGCAACATGGGTACGAGACTTAA

Coding sequence (CDS)

ATGACCCCAATTTGTTTCCATCCACAAGAAAAGAATCTTCTATCATCGCCGCACACGTGTACGGTAGATATTCGAAGCAGTGCCAGTACAAAGCTGTCTACTTATTTGTCAAAAACGATAAGAGAAGAAATTGCAGTTCCTTGCGTATCTACCGTTGAAAACTTTCTGAAACTCTCCCCTTGGTTCTTGTCTTCAAGTGAGCAACATGGGTACGAGACTTAA

Protein sequence

MTPICFHPQEKNLLSSPHTCTVDIRSSASTKLSTYLSKTIREEIAVPCVSTVENFLKLSPWFLSSSEQHGYET
Homology
[Close]
BLAST of Csor.00g031210 vs. NCBI nr
Match: KAG6577479.1 (hypothetical protein SDJN03_25053, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 150 bits (379), Expect = 9.99e-46
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MTPICFHPQEKNLLSSPHTCTVDIRSSASTKLSTYLSKTIREEIAVPCVSTVENFLKLSP 60
          MTPICFHPQEKNLLSSPHTCTVDIRSSASTKLSTYLSKTIREEIAVPCVSTVENFLKLSP
Sbjct: 1  MTPICFHPQEKNLLSSPHTCTVDIRSSASTKLSTYLSKTIREEIAVPCVSTVENFLKLSP 60

Query: 61 WFLSSSEQHGYET 73
          WFLSSSEQHGYET
Sbjct: 61 WFLSSSEQHGYET 73

The following BLAST results are available for this feature:
BLAST of Csor.00g031210 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g031210 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6577479.19.99e-46100.00hypothetical protein SDJN03_25053, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g031210 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g031210 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g031210.m01Csor.00g031210.m01mRNA