Csor.00g030850 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g030850
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RPM1-interacting protein 4-like isoform X2
Location	Csor_Chr16: 6919800 .. 6921827 (-)
RNA-Seq Expression	Csor.00g030850
Synteny	Csor.00g030850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGGGAGCAAATGTTATAACGTAAGAAGCCAAAAGACCGACTTTATAGCAATTCAACGCCCTACTTTCTCGGCAAGACAACTTTTATTTTTAATTTTAATTTTGAGTTATTACGACTTTTAAAATTTCATAGGTCTTTTTTATTTACTATATTAATATTATTTATAAAATAAAATATTAATAGAAAAAATATATTAAAATTTTTTTTAGAGAGTTTTAAGATTATTATGGAAAATTTGTTATTTTTAGCTTTTTAATTAATTTAGCCGATATTTATTATTATTATTATTAATTATTTAGAATCGAAATAAAAGGCAGCAGTTGGAGGCCGATTTGGCATAAACAAAATCTCTTCTTCTTGTCTCTCTTGCTCGCTCCTCTCCTTCTCCTGGTGTCGCCATCCTCTTTCTTCCCTTCTTCCGTTCTTCGTTTTGGCCGATTATCTTCTCCTTTTTCCTAATTTCTGCAATCATGGCGGTATGTCATTCCTCAATTCATTCCATTTACTTCCCCGAATTCGGTTTTGTTCTTTTTCTTCATTGTTGATTTCCCCATTTCGTCATCTCCTTTCTTTCTTCCTTTTAGATTCACTGCCTCGATTGTTCCCCCTCTTTTCTTGGAGATTTGCTTAATGATTGTCATGCCTGGATTTTCTTCCCCATTATCATTATTATTATATGTTTTATTTGTTCCTTTTATTTATAATTTTTGTGATATGTTGTGAATCTGCATTTCCTCTCCACTCTGATCTTATCATCTAGTGTGTTAGTCACTGGGACTTGACATTTTCGTATGTTTGAATTGAATTTTCGTTATCATGATTCATGGAATTTGATCGCCCAAGTATTTGTAATTGATAGAATTCTGATAGATAAGGATATTTAAAATTTAAATCAGCTGTGAAGAAACATTTTTAGTTTTTCCCATCACTTTCTCATCTTTTTATCTCGCAATTCCTTCGTCTAATTTATGATTTCTGCTATTAATTATGAATCATCCTATTTTTATATCATTAATGGAAGAAAAAGCAATTAAGTCCTTCAAATTTTTACTTCGAAATCCATGATCTATATTTTAAGAGACTAAACGTTCAGAATTTGAATCCTTATTTTCATTATTCATTGTTGACTGCTTTTGATCGACAAATCTGAACATTTTTGTTGGGTTAAATTATAAATTTAATCGATGTACTTTGGCTCTGTCTAGTCCTTTGAGCTGTTAAACTTTTCAATTTGGTCTTAAAATTTGGATTACGCTTTTCTCTAATCCCTTCCATTGCATTATTAATAGAAACTGATGTAGAAGATATATTACATAAATTTTCGTTGGACATTTCATTAATATTGTTAATTGTTAATGATGGGGACATGATATAAGCATAATGTATGCATTTTAATGTCTAGAATCAAATAAATGTATGTATTTTAACAGGAGAAGGGTCAGCCACTACCGAAGTTTGGTGAATGGGATGTTAATAACCCTGCTTCTGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGATGTGAGAAGAAATCCGGTGGCCAAATCGGATCACCTGGAAAGGCACTAAGGCCTGCAGCAGCAGGCTCTGGCAAACCTCAGGCAGTAAGATCCTATGAACACAATGTTTTTTCCTAGCCTTTTCTATAATGCCTGCTATATGTGTATATACCTCCTCTTCATTGTGATATTTACTGCTCGTTTGTGCGCCTAAATATGTTCGGAATACTATTAGGATAAAAGGGTTGGTTGTAACTCAAGGGAATGGGATCTTATAATGGGCTTCTGTGCTTGTTTGATCATTCTTCATTGAAATGAAATAGATGTTTTTGGACTTTGGAATGATGCTCAAGCACTGTTTTTTGCTTCGTTTGGTTTAATCAACAATCAGTGAGGTGAAATGAAATAGATGCTTGTTTGATCATTCTTTATGAGCTGTTACACCTTTCCTTGATGGGATTATGTTTTTTTCTGTTCCAGAAATGGTTCTGCTGCATACAGAGCCCACCTACAGAATCTTGA

mRNA sequence

ATGAAAGGGAGCAAATGTTATAACGAGAAGGGTCAGCCACTACCGAAGTTTGGTGAATGGGATGTTAATAACCCTGCTTCTGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGATGTGAGAAGAAATCCGGTGGCCAAATCGGATCACCTGGAAAGGCACTAAGGCCTGCAGCAGCAGGCTCTGGCAAACCTCAGGCAAAATGGTTCTGCTGCATACAGAGCCCACCTACAGAATCTTGA

Coding sequence (CDS)

ATGAAAGGGAGCAAATGTTATAACGAGAAGGGTCAGCCACTACCGAAGTTTGGTGAATGGGATGTTAATAACCCTGCTTCTGCAGAGGGCTTCACTGTGATCTTTAATAAGGCAAGATGTGAGAAGAAATCCGGTGGCCAAATCGGATCACCTGGAAAGGCACTAAGGCCTGCAGCAGCAGGCTCTGGCAAACCTCAGGCAAAATGGTTCTGCTGCATACAGAGCCCACCTACAGAATCTTGA

Protein sequence

MKGSKCYNEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAKWFCCIQSPPTES

Homology

[Close]

BLAST of Csor.00g030850 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.5e-20
Identity = 48/78 (61.54%), Postives = 60/78 (76.92%), Query Frame = 0


Query: 8  NEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKA----LRPAAAGSG 67
          ++KG+PLPKFGEWDVN+PASAEGFTVIFNKAR EKK+GG+ GSPGK+    ++       
Sbjct: 2  SDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPS 61

Query: 68 KPQ-AKWFCCIQSPPTES 81
          KPQ  KW CC+Q+P  +S
Sbjct: 62 KPQPKKWLCCMQAPAVDS 79

[Close]

BLAST of Csor.00g030850 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.1e-08
Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 0


Query: 9   EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAK 68
           EK   +PKFG+WD NNP+SA+G+T IFNK R E+ SG  +   G +  P    S  P   
Sbjct: 143 EKVTVVPKFGDWDENNPSSADGYTHIFNKVREERSSGANVS--GSSRTPTHQSSRNPNNT 202

Query: 69  WFCC 73
             CC
Sbjct: 203 SSCC 204

[Close]

BLAST of Csor.00g030850 vs. NCBI nr
Match: KAG6577515.1 (Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 174 bits (441), Expect = 5.65e-55
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0


Query: 1  MKGSKCYNEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAA 60
          MKGSKCYNEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAA
Sbjct: 1  MKGSKCYNEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAA 60

Query: 61 GSGKPQAKWFCCIQSPPTES 80
          GSGKPQAKWFCCIQSPPTES
Sbjct: 61 GSGKPQAKWFCCIQSPPTES 80

[Close]

BLAST of Csor.00g030850 vs. NCBI nr
Match: XP_022932369.1 (RPM1-interacting protein 4-like isoform X2 [Cucurbita moschata] >XP_023553401.1 RPM1-interacting protein 4-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG7015574.1 RPM1-interacting protein 4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 155 bits (392), Expect = 1.43e-47
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 9  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAK 68
          EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAK
Sbjct: 3  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAK 62

Query: 69 WFCCIQSPPTES 80
          WFCCIQSPPTES
Sbjct: 63 WFCCIQSPPTES 74

[Close]

BLAST of Csor.00g030850 vs. NCBI nr
Match: XP_022965237.1 (RPM1-interacting protein 4-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 152 bits (384), Expect = 2.38e-46
Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 9  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAK 68
          EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQI SPGKALRPAAAGSGKPQAK
Sbjct: 3  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIESPGKALRPAAAGSGKPQAK 62

Query: 69 WFCCIQSPPTES 80
          WFCCIQSPPTES
Sbjct: 63 WFCCIQSPPTES 74

[Close]

BLAST of Csor.00g030850 vs. NCBI nr
Match: XP_022932368.1 (RPM1-interacting protein 4-like isoform X1 [Cucurbita moschata] >XP_023553400.1 RPM1-interacting protein 4-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 124 bits (312), Expect = 2.67e-35
Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 9  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAK 68
          EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQA 
Sbjct: 3  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAM 62

Query: 69 WF 70
          + 
Sbjct: 63 FL 64

[Close]

BLAST of Csor.00g030850 vs. NCBI nr
Match: XP_022965236.1 (RPM1-interacting protein 4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 121 bits (304), Expect = 4.43e-34
Identity = 58/62 (93.55%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 9  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAK 68
          EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQI SPGKALRPAAAGSGKPQA 
Sbjct: 3  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIESPGKALRPAAAGSGKPQAM 62

Query: 69 WF 70
          + 
Sbjct: 63 FL 64

[Close]

BLAST of Csor.00g030850 vs. ExPASy TrEMBL
Match: A0A6J1EWT6 (RPM1-interacting protein 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111438740 PE=4 SV=1)

HSP 1 Score: 155 bits (392), Expect = 6.93e-48
Identity = 72/72 (100.00%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 9  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAK 68
          EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAK
Sbjct: 3  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAK 62

Query: 69 WFCCIQSPPTES 80
          WFCCIQSPPTES
Sbjct: 63 WFCCIQSPPTES 74

[Close]

BLAST of Csor.00g030850 vs. ExPASy TrEMBL
Match: A0A6J1HJT3 (RPM1-interacting protein 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465150 PE=4 SV=1)

HSP 1 Score: 152 bits (384), Expect = 1.15e-46
Identity = 71/72 (98.61%), Postives = 71/72 (98.61%), Query Frame = 0


Query: 9  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAK 68
          EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQI SPGKALRPAAAGSGKPQAK
Sbjct: 3  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIESPGKALRPAAAGSGKPQAK 62

Query: 69 WFCCIQSPPTES 80
          WFCCIQSPPTES
Sbjct: 63 WFCCIQSPPTES 74

[Close]

BLAST of Csor.00g030850 vs. ExPASy TrEMBL
Match: A0A6J1F1G4 (RPM1-interacting protein 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111438740 PE=4 SV=1)

HSP 1 Score: 124 bits (312), Expect = 1.29e-35
Identity = 59/62 (95.16%), Postives = 60/62 (96.77%), Query Frame = 0


Query: 9  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAK 68
          EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQA 
Sbjct: 3  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAM 62

Query: 69 WF 70
          + 
Sbjct: 63 FL 64

[Close]

BLAST of Csor.00g030850 vs. ExPASy TrEMBL
Match: A0A6J1HL52 (RPM1-interacting protein 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111465150 PE=4 SV=1)

HSP 1 Score: 121 bits (304), Expect = 2.14e-34
Identity = 58/62 (93.55%), Postives = 59/62 (95.16%), Query Frame = 0


Query: 9  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSGKPQAK 68
          EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQI SPGKALRPAAAGSGKPQA 
Sbjct: 3  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIESPGKALRPAAAGSGKPQAM 62

Query: 69 WF 70
          + 
Sbjct: 63 FL 64

[Close]

BLAST of Csor.00g030850 vs. ExPASy TrEMBL
Match: A0A0A0L7F7 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G047910 PE=4 SV=1)

HSP 1 Score: 120 bits (300), Expect = 8.02e-34
Identity = 61/75 (81.33%), Postives = 64/75 (85.33%), Query Frame = 0


Query: 8  NEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPA-AAGSGKPQ 67
          +EKGQPLPKFGEWDVNNPASAEGFTVIFNKAR EKK+GGQ  SPGKA R    A  GKPQ
Sbjct: 2  SEKGQPLPKFGEWDVNNPASAEGFTVIFNKARDEKKTGGQPESPGKAPRAKNVADPGKPQ 61

Query: 68 AK-WFCCIQSPPTES 80
          AK WFCCIQSPPT+S
Sbjct: 62 AKKWFCCIQSPPTQS 76

[Close]

BLAST of Csor.00g030850 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 100.5 bits (249), Expect = 6.4e-22
Identity = 48/79 (60.76%), Postives = 60/79 (75.95%), Query Frame = 0


Query: 7  YNEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKA----LRPAAAGS 66
          + +KG+PLPKFGEWDVN+PASAEGFTVIFNKAR EKK+GG+ GSPGK+    ++      
Sbjct: 17 WRDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDP 76

Query: 67 GKPQ-AKWFCCIQSPPTES 81
           KPQ  KW CC+Q+P  +S
Sbjct: 77 SKPQPKKWLCCMQAPAVDS 95

[Close]

BLAST of Csor.00g030850 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-19
Identity = 46/71 (64.79%), Postives = 54/71 (76.06%), Query Frame = 0


Query: 9  EKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALRPAAAGSG----K 68
          +KG+PLPKFGEWDVN+P+SAEGFTVIFNKAR EKK GG+  SPGK   P    +G    K
Sbjct: 3  DKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKD-EPGYNKNGEVLEK 62

Query: 69 PQAKWFCCIQS 76
          P  KWFCCI++
Sbjct: 63 PAKKWFCCIRA 72

[Close]

BLAST of Csor.00g030850 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 85.1 bits (209), Expect = 2.8e-17
Identity = 41/60 (68.33%), Postives = 49/60 (81.67%), Query Frame = 0


Query: 7  YNEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALR-PAAAGSGKP 66
          + +KG+PLPKFGEWDVN+PASAEGFTVIFNKAR EKK+GG+ GSPGK+      +G G P
Sbjct: 17 WRDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDP 76

[Close]

BLAST of Csor.00g030850 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 84.3 bits (207), Expect = 4.7e-17
Identity = 41/59 (69.49%), Postives = 49/59 (83.05%), Query Frame = 0


Query: 8  NEKGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGSPGKALR-PAAAGSGKP 66
          ++KG+PLPKFGEWDVN+PASAEGFTVIFNKAR EKK+GG+ GSPGK+      +G G P
Sbjct: 2  SDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDP 60

[Close]

BLAST of Csor.00g030850 vs. TAIR 10
Match: AT5G63270.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 70.1 bits (170), Expect = 9.2e-13
Identity = 38/74 (51.35%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 10 KGQPLPKFGEWDVNNPASAEGFTVIFNKARCEKKSGGQIGS-PGKALRPA---------- 69
          KG+PLPKFGEWDVNNPASAEGFTVIF+KA  EKK+    G+ P   + P           
Sbjct: 5  KGKPLPKFGEWDVNNPASAEGFTVIFSKASDEKKTKKASGAGPNSLVSPQRNQNSDQNNN 64

Query: 70 -AAGSGKPQAKWFC 72
           ++ + K + KWFC
Sbjct: 65 HSSQNPKAKNKWFC 78

The following BLAST results are available for this feature:

BLAST of Csor.00g030850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22633	1.5e-20	61.54	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
Q8GYN5	5.1e-08	45.31	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]

BLAST of Csor.00g030850 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577515.1	5.65e-55	100.00	Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022932369.1	1.43e-47	100.00	RPM1-interacting protein 4-like isoform X2 [Cucurbita moschata] >XP_023553401.1 ...	[more]
XP_022965237.1	2.38e-46	98.61	RPM1-interacting protein 4-like isoform X2 [Cucurbita maxima]	[more]
XP_022932368.1	2.67e-35	95.16	RPM1-interacting protein 4-like isoform X1 [Cucurbita moschata] >XP_023553400.1 ...	[more]
XP_022965236.1	4.43e-34	93.55	RPM1-interacting protein 4-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Csor.00g030850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWT6	6.93e-48	100.00	RPM1-interacting protein 4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1HJT3	1.15e-46	98.61	RPM1-interacting protein 4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1F1G4	1.29e-35	95.16	RPM1-interacting protein 4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1HL52	2.14e-34	93.55	RPM1-interacting protein 4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A0A0L7F7	8.02e-34	81.33	AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G04...	[more]

BLAST of Csor.00g030850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55850.3	6.4e-22	60.76	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G04410.1	1.3e-19	64.79	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.2	2.8e-17	68.33	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.1	4.7e-17	69.49	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G63270.1	9.2e-13	51.35	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 9..44 e-value: 5.3E-22 score: 76.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..66
None	No IPR available	PANTHER	PTHR33159:SF64	RPM1-INTERACTING PROTEIN 4-LIKE	coord: 8..76
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 8..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g030850.m01	Csor.00g030850.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane