Csor.00g030360 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAATCTTTATGTTACTGCTCTTAGATTTCGATTGCTTAGACAACAAGGTTACTATGTTTCATGTGGTAAGTCTCTCAATTCAAATTTTCAAAGAATTATATCGTTTTAAGAAACAGACTTATAATTTTTAAACAAAGATATTCAACAAGTTTACGAACGAAAAGAGAGATTTCGAAGAATCAATCGTGAAGGACGAGAGTGGAATATTAAGCTTGTATGAAGCATCGCATTTGAGAATGAACGGGGAGAATATATTGGATAAGGCTCTAACCTTCACAACTACTAAACTTCAAACAATGGTCATGAATTCTACGTCTCGCTTCGTAGAAGAAGCTAAATATGCTTTGAAGTGGCCGATATATAAAGTTGTGCCAAGGTTCATGACTAGAGATAAAGTGGCCGATATATAAAGTGGCCGAATCAATCGTGAAGGACGAGAGTGCAAAGTATTGTTTTTGAATGATATATAAAGTGGCCGATATATAAAGTCGTCTCGCTTCGTAGAAGAAGCTAAACGTTAACGTAGTCCTTTCTTAACTATTTTTATTTATTTATTTGGGGGTATTACAGATGAAAAGGCAGTGTAGAACTTATGTTATGGAAACTAAATGGTTCTATGAAAGGCATCTTTTTACTTCAATTGCATTCCTTGCTTTGGGAAAAATGTTGCTTCAAAACAGGCTTCTCAGTGGGCTCAACCTCAACCTACGCTTCTTATAGCTTCCGGGGTCATTGGAAGGCTCATGAATGACATAGCTTCCCACAAGGTATCAATTTCTAATGCCAAATGGTATATTTTCAAGAACACATTTGAAATATTACTAAATTTGATACTCAGTTTGAACGAGAGAGAGGTCATGTGGCTTCAGAAATTGAATGTTACATGAACGAATATGAAGCATCACAAGAAAAGGCCAAGTGGTAAAAGCATGGAAAGATATCATAGAAGACTATACCGAATCCGCAATGCTTATTCGTAATGTAATCCTCGACTGCGTGTTGAATTTTGCTCAACTTTTGAACCTCTTTTATAAGGAGGCAGATGGTTACACATTTGCTGATGGAGCGACCAAACAGTTTATTATCATGATGCTTACCGACCCCGTGCCGATATGA ATGAGAATCTTTATGTTACTGCTCTTAGATTTCGATTGCTTAGACAACAAGGTTACTATGTTTCATGTGGCTTCTCAGTGGGCTCAACCTCAACCTACGCTTCTTATAGCTTCCGGGGTCATTGGAAGGCTCATGAATGACATAGCTTCCCACAAGGTATCAATTTCTAATGCCAAATGCATCACAAGAAAAGGCCAAGTGGTAAAAGCATGGAAAGATATCATAGAAGACTATACCGAATCCGCAATGCTTATTCGTAATGTAATCCTCGACTGCGTGTTGAATTTTGCTCAACTTTTGAACCTCTTTTATAAGGAGGCAGATGGTTACACATTTGCTGATGGAGCGACCAAACAGTTTATTATCATGATGCTTACCGACCCCGTGCCGATATGA ATGAGAATCTTTATGTTACTGCTCTTAGATTTCGATTGCTTAGACAACAAGGTTACTATGTTTCATGTGGCTTCTCAGTGGGCTCAACCTCAACCTACGCTTCTTATAGCTTCCGGGGTCATTGGAAGGCTCATGAATGACATAGCTTCCCACAAGGTATCAATTTCTAATGCCAAATGCATCACAAGAAAAGGCCAAGTGGTAAAAGCATGGAAAGATATCATAGAAGACTATACCGAATCCGCAATGCTTATTCGTAATGTAATCCTCGACTGCGTGTTGAATTTTGCTCAACTTTTGAACCTCTTTTATAAGGAGGCAGATGGTTACACATTTGCTGATGGAGCGACCAAACAGTTTATTATCATGATGCTTACCGACCCCGTGCCGATATGA MRIFMLLLLDFDCLDNKVTMFHVASQWAQPQPTLLIASGVIGRLMNDIASHKVSISNAKCITRKGQVVKAWKDIIEDYTESAMLIRNVILDCVLNFAQLLNLFYKEADGYTFADGATKQFIIMMLTDPVPI Homology
BLAST of Csor.00g030360 vs. ExPASy Swiss-Prot
Match: B2KSJ6 (Alpha-farnesene synthase OS=Cucumis melo OX=3656 PE=1 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 9.5e-12 Identity = 45/129 (34.88%), Postives = 64/129 (49.61%), Query Frame = 0
BLAST of Csor.00g030360 vs. ExPASy Swiss-Prot
Match: B2KSJ5 ((+)-gamma-cadinene synthase OS=Cucumis melo OX=3656 PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 4.7e-11 Identity = 50/145 (34.48%), Postives = 73/145 (50.34%), Query Frame = 0
BLAST of Csor.00g030360 vs. ExPASy Swiss-Prot
Match: W0FFD7 ((-)-drimenol synthase OS=Persicaria hydropiper OX=46901 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.8e-10 Identity = 42/127 (33.07%), Postives = 68/127 (53.54%), Query Frame = 0
BLAST of Csor.00g030360 vs. ExPASy Swiss-Prot
Match: B3TPQ6 (Beta-cubebene synthase OS=Magnolia grandiflora OX=3406 PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.2e-09 Identity = 39/148 (26.35%), Postives = 71/148 (47.97%), Query Frame = 0
BLAST of Csor.00g030360 vs. ExPASy Swiss-Prot
Match: F6M8H7 (Probable sesquiterpene synthase OS=Santalum murrayanum OX=453085 GN=STPS PE=3 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.7e-08 Identity = 39/125 (31.20%), Postives = 59/125 (47.20%), Query Frame = 0
BLAST of Csor.00g030360 vs. NCBI nr
Match: KAG6577562.1 (hypothetical protein SDJN03_25136, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 262 bits (670), Expect = 2.75e-88 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of Csor.00g030360 vs. NCBI nr
Match: XP_038877743.1 (LOW QUALITY PROTEIN: (-)-germacrene D synthase-like [Benincasa hispida]) HSP 1 Score: 126 bits (316), Expect = 6.92e-31 Identity = 66/125 (52.80%), Postives = 80/125 (64.00%), Query Frame = 0
BLAST of Csor.00g030360 vs. NCBI nr
Match: TYK19406.1 ((-)-germacrene D synthase-like [Cucumis melo var. makuwa]) HSP 1 Score: 115 bits (288), Expect = 4.63e-28 Identity = 66/142 (46.48%), Postives = 84/142 (59.15%), Query Frame = 0
BLAST of Csor.00g030360 vs. NCBI nr
Match: XP_038903578.1 (LOW QUALITY PROTEIN: (-)-germacrene D synthase-like [Benincasa hispida]) HSP 1 Score: 117 bits (294), Expect = 5.21e-28 Identity = 64/125 (51.20%), Postives = 81/125 (64.80%), Query Frame = 0
BLAST of Csor.00g030360 vs. NCBI nr
Match: XP_016900585.1 (PREDICTED: (-)-germacrene D synthase-like [Cucumis melo]) HSP 1 Score: 117 bits (292), Expect = 1.54e-27 Identity = 65/135 (48.15%), Postives = 85/135 (62.96%), Query Frame = 0
BLAST of Csor.00g030360 vs. ExPASy TrEMBL
Match: A0A0A0L5V3 (Terpene_synth_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G040860 PE=4 SV=1) HSP 1 Score: 116 bits (291), Expect = 2.87e-30 Identity = 64/125 (51.20%), Postives = 80/125 (64.00%), Query Frame = 0
BLAST of Csor.00g030360 vs. ExPASy TrEMBL
Match: A0A5D3D750 ((-)-germacrene D synthase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G00390 PE=4 SV=1) HSP 1 Score: 115 bits (288), Expect = 2.24e-28 Identity = 66/142 (46.48%), Postives = 84/142 (59.15%), Query Frame = 0
BLAST of Csor.00g030360 vs. ExPASy TrEMBL
Match: A0A1S4DXZ8 ((-)-germacrene D synthase-like OS=Cucumis melo OX=3656 GN=LOC103491132 PE=4 SV=1) HSP 1 Score: 117 bits (292), Expect = 7.46e-28 Identity = 65/135 (48.15%), Postives = 85/135 (62.96%), Query Frame = 0
BLAST of Csor.00g030360 vs. ExPASy TrEMBL
Match: A0A1S4DX89 ((-)-germacrene D synthase-like OS=Cucumis melo OX=3656 GN=LOC107990967 PE=4 SV=1) HSP 1 Score: 115 bits (288), Expect = 9.70e-28 Identity = 66/142 (46.48%), Postives = 84/142 (59.15%), Query Frame = 0
BLAST of Csor.00g030360 vs. ExPASy TrEMBL
Match: A0A0A0L791 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G042380 PE=4 SV=1) HSP 1 Score: 112 bits (281), Expect = 1.36e-26 Identity = 60/124 (48.39%), Postives = 78/124 (62.90%), Query Frame = 0
BLAST of Csor.00g030360 vs. TAIR 10
Match: AT3G14540.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein ) HSP 1 Score: 53.9 bits (128), Expect = 1.1e-07 Identity = 34/128 (26.56%), Postives = 61/128 (47.66%), Query Frame = 0
BLAST of Csor.00g030360 vs. TAIR 10
Match: AT3G14520.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein ) HSP 1 Score: 53.1 bits (126), Expect = 1.9e-07 Identity = 33/128 (25.78%), Postives = 63/128 (49.22%), Query Frame = 0
BLAST of Csor.00g030360 vs. TAIR 10
Match: AT3G29410.1 (Terpenoid cyclases/Protein prenyltransferases superfamily protein ) HSP 1 Score: 50.8 bits (120), Expect = 9.5e-07 Identity = 32/125 (25.60%), Postives = 60/125 (48.00%), Query Frame = 0
BLAST of Csor.00g030360 vs. TAIR 10
Match: AT4G13300.1 (terpenoid synthase 13 ) HSP 1 Score: 50.1 bits (118), Expect = 1.6e-06 Identity = 32/126 (25.40%), Postives = 63/126 (50.00%), Query Frame = 0
BLAST of Csor.00g030360 vs. TAIR 10
Match: AT4G13280.1 (terpenoid synthase 12 ) HSP 1 Score: 49.7 bits (117), Expect = 2.1e-06 Identity = 33/125 (26.40%), Postives = 61/125 (48.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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