Csor.00g030200 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g030200
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	F-box protein SKIP23-like
Location	Csor_Chr16: 7505674 .. 7506822 (-)
RNA-Seq Expression	Csor.00g030200
Synteny	Csor.00g030200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATTCAAAATTTAGAGATTGGACTGCACTTGACTACGATGTTCTGGGTGTGATTCTCAACAAAATGGTGTCTCTTTATGATTATCTCCAATTCAGCATTGTATGTAAGTCTTGGTATTTTGTTGCATTACGACACAAACACCAACGATCCATAATTACTTCCAAGTTTCCTCAACTGCCGATGCTCATCGTTCCCTCGAAAGATGGTCTTGAAAATCAGCATTGCTTATACGACCCCAGAAAAAATAGAACCCGTCCTGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTTGTGGCTCCTCTTTTGGTTGGTTGATCATGTGTGAAGAGACACTTAATCTTACTTTATTCAACCCTTTTTCTGGGACTGTGATTTGTCTTCCTTCCATTTTCATAGATGATGAACCTGATTATGCCCCAGACCGCATAGTTAAAGCTATATTAACCAAAGATCCATCGTTATATCCAAACGATTATATGGTTGTAGCAATCTATAGTTCATATTCAAGGTTGTGCCTTATGAGAGCAAATGATAAGAGTTGGACGTATTCGTACCCAGAACCAAATATTCCTTTTAAGGATATTAATGTTTCTAGTGATACTTTATATGCTACGGAAAATAATATGATGGTTTGGAAAGTTGAAGTTAAGAATAGAGATGATGAAAGTTCATCGATTTCTATTTCTTTAAAGATGGTCCACGCTAAAAGAACCAATGATTTCGTTGTATCCTATATTACAGAGTCTTCCAAAGGAGAGCTTTTGTTAGTTTTGAGGTCAATATCTGAAGAGGATTCACAATTGGAGACTACCAAGTTTAAAGTCTACAAACTTATTGATGAGTGTGAAAATGACATGCTAAGGGCCGTAAAGTTGAAGAGTTTAGATGGAGATGCTATGTTTATCGGAGACTCTCAATCCATCTGTGTATCAACTAAGTATTTTCCTAAATGTTTACCAAATTGTATATATTTTATCAATGGTTACTACAATTATATTCCGAATTTAGAACAAGATTCAGGGATATTCAACCTAGAAGATAAAAGATTTGCGAACCATTACATACGAGATCCTGCACACAAGAATTTACCTCAACCCATTTGGATCATTCCAACAATATGTTCCAAAGATTTTGAAGATTAA

mRNA sequence

ATGGAAAATTCAAAATTTAGAGATTGGACTGCACTTGACTACGATGTTCTGGGTGTGATTCTCAACAAAATGGTGTCTCTTTATGATTATCTCCAATTCAGCATTGTATGTAAGTCTTGGTATTTTGTTGCATTACGACACAAACACCAACGATCCATAATTACTTCCAAGTTTCCTCAACTGCCGATGCTCATCGTTCCCTCGAAAGATGGTCTTGAAAATCAGCATTGCTTATACGACCCCAGAAAAAATAGAACCCGTCCTGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTTGTGGCTCCTCTTTTGGTTGGTTGATCATGTGTGAAGAGACACTTAATCTTACTTTATTCAACCCTTTTTCTGGGACTGTGATTTGTCTTCCTTCCATTTTCATAGATGATGAACCTGATTATGCCCCAGACCGCATAGTTAAAGCTATATTAACCAAAGATCCATCGTTATATCCAAACGATTATATGGTTGTAGCAATCTATAGTTCATATTCAAGGTTGTGCCTTATGAGAGCAAATGATAAGAGTTGGACGTATTCGTACCCAGAACCAAATATTCCTTTTAAGGATATTAATGTTTCTAGTGATACTTTATATGCTACGGAAAATAATATGATGGTTTGGAAAGTTGAAGTTAAGAATAGAGATGATGAAAGTTCATCGATTTCTATTTCTTTAAAGATGGTCCACGCTAAAAGAACCAATGATTTCGTTGTATCCTATATTACAGAGTCTTCCAAAGGAGAGCTTTTGTTAGTTTTGAGGTCAATATCTGAAGAGGATTCACAATTGGAGACTACCAAGTTTAAAGTCTACAAACTTATTGATGAGTGTGAAAATGACATGCTAAGGGCCGTAAAGTTGAAGAGTTTAGATGGAGATGCTATGTTTATCGGAGACTCTCAATCCATCTGTGTATCAACTAAGTATTTTCCTAAATGTTTACCAAATTGTATATATTTTATCAATGGTTACTACAATTATATTCCGAATTTAGAACAAGATTCAGGGATATTCAACCTAGAAGATAAAAGATTTGCGAACCATTACATACGAGATCCTGCACACAAGAATTTACCTCAACCCATTTGGATCATTCCAACAATATGTTCCAAAGATTTTGAAGATTAA

Coding sequence (CDS)

ATGGAAAATTCAAAATTTAGAGATTGGACTGCACTTGACTACGATGTTCTGGGTGTGATTCTCAACAAAATGGTGTCTCTTTATGATTATCTCCAATTCAGCATTGTATGTAAGTCTTGGTATTTTGTTGCATTACGACACAAACACCAACGATCCATAATTACTTCCAAGTTTCCTCAACTGCCGATGCTCATCGTTCCCTCGAAAGATGGTCTTGAAAATCAGCATTGCTTATACGACCCCAGAAAAAATAGAACCCGTCCTGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTTGTGGCTCCTCTTTTGGTTGGTTGATCATGTGTGAAGAGACACTTAATCTTACTTTATTCAACCCTTTTTCTGGGACTGTGATTTGTCTTCCTTCCATTTTCATAGATGATGAACCTGATTATGCCCCAGACCGCATAGTTAAAGCTATATTAACCAAAGATCCATCGTTATATCCAAACGATTATATGGTTGTAGCAATCTATAGTTCATATTCAAGGTTGTGCCTTATGAGAGCAAATGATAAGAGTTGGACGTATTCGTACCCAGAACCAAATATTCCTTTTAAGGATATTAATGTTTCTAGTGATACTTTATATGCTACGGAAAATAATATGATGGTTTGGAAAGTTGAAGTTAAGAATAGAGATGATGAAAGTTCATCGATTTCTATTTCTTTAAAGATGGTCCACGCTAAAAGAACCAATGATTTCGTTGTATCCTATATTACAGAGTCTTCCAAAGGAGAGCTTTTGTTAGTTTTGAGGTCAATATCTGAAGAGGATTCACAATTGGAGACTACCAAGTTTAAAGTCTACAAACTTATTGATGAGTGTGAAAATGACATGCTAAGGGCCGTAAAGTTGAAGAGTTTAGATGGAGATGCTATGTTTATCGGAGACTCTCAATCCATCTGTGTATCAACTAAGTATTTTCCTAAATGTTTACCAAATTGTATATATTTTATCAATGGTTACTACAATTATATTCCGAATTTAGAACAAGATTCAGGGATATTCAACCTAGAAGATAAAAGATTTGCGAACCATTACATACGAGATCCTGCACACAAGAATTTACCTCAACCCATTTGGATCATTCCAACAATATGTTCCAAAGATTTTGAAGATTAA

Protein sequence

MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAHKNLPQPIWIIPTICSKDFED

Homology

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BLAST of Csor.00g030200 vs. NCBI nr
Match: KAG6577578.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 795 bits (2052), Expect = 1.35e-290
Identity = 382/382 (100.00%), Postives = 382/382 (100.00%), Query Frame = 0


Query: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
           MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ
Sbjct: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60

Query: 61  LPMLIVPSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN 120
           LPMLIVPSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN
Sbjct: 61  LPMLIVPSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN 120

Query: 121 PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND 180
           PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND
Sbjct: 121 PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND 180

Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
           KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT
Sbjct: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240

Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
           NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD
Sbjct: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300

Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360
           AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP
Sbjct: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360

Query: 361 AHKNLPQPIWIIPTICSKDFED 382
           AHKNLPQPIWIIPTICSKDFED
Sbjct: 361 AHKNLPQPIWIIPTICSKDFED 382

[Close]

BLAST of Csor.00g030200 vs. NCBI nr
Match: XP_022923266.1 (probable F-box protein At1g65740 [Cucurbita moschata])

HSP 1 Score: 790 bits (2041), Expect = 6.40e-289
Identity = 380/382 (99.48%), Postives = 381/382 (99.74%), Query Frame = 0


Query: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
           MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ
Sbjct: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60

Query: 61  LPMLIVPSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN 120
           LPMLIVPSK+GLE QHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN
Sbjct: 61  LPMLIVPSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN 120

Query: 121 PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND 180
           PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND
Sbjct: 121 PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND 180

Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
           KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT
Sbjct: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240

Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
           NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD
Sbjct: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300

Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360
           AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP
Sbjct: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360

Query: 361 AHKNLPQPIWIIPTICSKDFED 382
           AHKNLPQPIWIIPTICSKDFED
Sbjct: 361 AHKNLPQPIWIIPTICSKDFED 382

[Close]

BLAST of Csor.00g030200 vs. NCBI nr
Match: XP_023552957.1 (probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 786 bits (2030), Expect = 3.04e-287
Identity = 378/382 (98.95%), Postives = 380/382 (99.48%), Query Frame = 0


Query: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
           MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ
Sbjct: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60

Query: 61  LPMLIVPSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN 120
           LPMLIVPSKDGLE QHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETL+LTLFN
Sbjct: 61  LPMLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFN 120

Query: 121 PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND 180
           PFSGTVICLPSIFI+DEPDYAPDRIVKAILTKDP LYPNDYMVVAIYSSYSRLCLMRAND
Sbjct: 121 PFSGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRAND 180

Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
           KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT
Sbjct: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240

Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
           NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD
Sbjct: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300

Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360
           AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP
Sbjct: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360

Query: 361 AHKNLPQPIWIIPTICSKDFED 382
           AHKNLPQPIWIIPTICSKDFED
Sbjct: 361 AHKNLPQPIWIIPTICSKDFED 382

[Close]

BLAST of Csor.00g030200 vs. NCBI nr
Match: XP_023553097.1 (uncharacterized protein LOC111810599 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 609 bits (1571), Expect = 1.13e-217
Identity = 293/359 (81.62%), Postives = 319/359 (88.86%), Query Frame = 0


Query: 24  MVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLENQHCLYDPRK 83
           MVSLYDYLQFS+VCKSWYF+ALR+KHQRSIITSKFPQLPMLIVPSKDGLE QHCLYDP K
Sbjct: 1   MVSLYDYLQFSLVCKSWYFLALRYKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPTK 60

Query: 84  NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPFSGTVICLPSIFIDDEPDYAPD 143
           NRT PVDFKFCFNKRCCGSSFGWLIMCEETL+LTLFNPFSGT ICLPSIFI+DEPDY PD
Sbjct: 61  NRTCPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTEICLPSIFIEDEPDYTPD 120

Query: 144 RIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKSWTYSYPEPNIPFKDINVSSDT 203
           RIVKAILTKDPSLYPNDYMV+AIY S  +LCLMR+NDKSWTY YPEPNIPF D+NV  +T
Sbjct: 121 RIVKAILTKDPSLYPNDYMVIAIYGSCVKLCLMRSNDKSWTYYYPEPNIPFSDVNVYGNT 180

Query: 204 LYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFVVSYITESSKGELLLVLRSI 263
           +YA+  +MMVWKVEVK R+DESSSISIS++MVH K  +D   S IT SSKGELLLVLRSI
Sbjct: 181 IYASGVDMMVWKVEVKIRNDESSSISISVRMVHTKSIDDLTRSNITVSSKGELLLVLRSI 240

Query: 264 SEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAMFIGDSQSICVSTKYFPKCLPN 323
           S E +QLET KFKVYKL +E EN M +A+K+KSLDGDAMFIGDSQSICVSTK FPKCLPN
Sbjct: 241 SVEVTQLETNKFKVYKLTEERENGMRKAIKVKSLDGDAMFIGDSQSICVSTKDFPKCLPN 300

Query: 324 CIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAHKNLPQPIWIIPTICSKDFED 382
           CIYF+NG   Y+PNL QDSGIF LEDK F +HYIRDPAH+NLP PIWIIPTICSKDF D
Sbjct: 301 CIYFMNGCNYYVPNLVQDSGIFYLEDKDFGDHYIRDPAHENLPPPIWIIPTICSKDFSD 359

[Close]

BLAST of Csor.00g030200 vs. NCBI nr
Match: XP_022923394.1 (uncharacterized protein LOC111431103 [Cucurbita moschata])

HSP 1 Score: 604 bits (1558), Expect = 1.08e-215
Identity = 291/359 (81.06%), Postives = 318/359 (88.58%), Query Frame = 0


Query: 24  MVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLENQHCLYDPRK 83
           MVSLYDYLQFS+VCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLE QHCLYDPRK
Sbjct: 1   MVSLYDYLQFSLVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRK 60

Query: 84  NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPFSGTVICLPSIFIDDEPDYAPD 143
           NRTRPVDFKFCFNKRCCGSSFGWLIMCEETL+LTLFNPFSGTVI LPSIFI+DEPDY PD
Sbjct: 61  NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVIRLPSIFIEDEPDYTPD 120

Query: 144 RIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKSWTYSYPEPNIPFKDINVSSDT 203
           RIVKAILTKDPSLYPNDYMVVAIY S ++LCLMR+NDKSWTY YPEPNIPF D+NV  DT
Sbjct: 121 RIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKSWTYYYPEPNIPFSDVNVYGDT 180

Query: 204 LYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFVVSYITESSKGELLLVLRSI 263
           +YA+  +MM+WKVEVK R+DESS ISIS++ VH K  +D   S IT SSKGELLLVLRSI
Sbjct: 181 IYASGVDMMIWKVEVKIRNDESSLISISVRTVHTKSIDDLTRSNITVSSKGELLLVLRSI 240

Query: 264 SEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAMFIGDSQSICVSTKYFPKCLPN 323
           S E++QLET KFKVYKL +E EN M +A+K+KSLDGDAMFIGDSQSICVSTK F KCLPN
Sbjct: 241 SVEETQLETNKFKVYKLTEERENGMRKAIKVKSLDGDAMFIGDSQSICVSTKDFRKCLPN 300

Query: 324 CIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAHKNLPQPIWIIPTICSKDFED 382
           CIYF+NG    +PNL QDSGIF LEDK F +HYI+DP H+NLP PIWIIPTICSKD +D
Sbjct: 301 CIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIQDPTHENLPPPIWIIPTICSKDLKD 359

[Close]

BLAST of Csor.00g030200 vs. ExPASy TrEMBL
Match: A0A6J1E6C7 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 PE=4 SV=1)

HSP 1 Score: 790 bits (2041), Expect = 3.10e-289
Identity = 380/382 (99.48%), Postives = 381/382 (99.74%), Query Frame = 0


Query: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
           MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ
Sbjct: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60

Query: 61  LPMLIVPSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN 120
           LPMLIVPSK+GLE QHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN
Sbjct: 61  LPMLIVPSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN 120

Query: 121 PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND 180
           PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND
Sbjct: 121 PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND 180

Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
           KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT
Sbjct: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240

Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
           NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD
Sbjct: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300

Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360
           AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP
Sbjct: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDP 360

Query: 361 AHKNLPQPIWIIPTICSKDFED 382
           AHKNLPQPIWIIPTICSKDFED
Sbjct: 361 AHKNLPQPIWIIPTICSKDFED 382

[Close]

BLAST of Csor.00g030200 vs. ExPASy TrEMBL
Match: A0A6J1E6A0 (uncharacterized protein LOC111431103 OS=Cucurbita moschata OX=3662 GN=LOC111431103 PE=4 SV=1)

HSP 1 Score: 604 bits (1558), Expect = 5.23e-216
Identity = 291/359 (81.06%), Postives = 318/359 (88.58%), Query Frame = 0


Query: 24  MVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLENQHCLYDPRK 83
           MVSLYDYLQFS+VCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLE QHCLYDPRK
Sbjct: 1   MVSLYDYLQFSLVCKSWYFVALRHKHQRSIITSKFPQLPMLIVPSKDGLEKQHCLYDPRK 60

Query: 84  NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPFSGTVICLPSIFIDDEPDYAPD 143
           NRTRPVDFKFCFNKRCCGSSFGWLIMCEETL+LTLFNPFSGTVI LPSIFI+DEPDY PD
Sbjct: 61  NRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVIRLPSIFIEDEPDYTPD 120

Query: 144 RIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKSWTYSYPEPNIPFKDINVSSDT 203
           RIVKAILTKDPSLYPNDYMVVAIY S ++LCLMR+NDKSWTY YPEPNIPF D+NV  DT
Sbjct: 121 RIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKSWTYYYPEPNIPFSDVNVYGDT 180

Query: 204 LYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFVVSYITESSKGELLLVLRSI 263
           +YA+  +MM+WKVEVK R+DESS ISIS++ VH K  +D   S IT SSKGELLLVLRSI
Sbjct: 181 IYASGVDMMIWKVEVKIRNDESSLISISVRTVHTKSIDDLTRSNITVSSKGELLLVLRSI 240

Query: 264 SEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAMFIGDSQSICVSTKYFPKCLPN 323
           S E++QLET KFKVYKL +E EN M +A+K+KSLDGDAMFIGDSQSICVSTK F KCLPN
Sbjct: 241 SVEETQLETNKFKVYKLTEERENGMRKAIKVKSLDGDAMFIGDSQSICVSTKDFRKCLPN 300

Query: 324 CIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAHKNLPQPIWIIPTICSKDFED 382
           CIYF+NG    +PNL QDSGIF LEDK F +HYI+DP H+NLP PIWIIPTICSKD +D
Sbjct: 301 CIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIQDPTHENLPPPIWIIPTICSKDLKD 359

[Close]

BLAST of Csor.00g030200 vs. ExPASy TrEMBL
Match: A0A6J1E5P5 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 PE=4 SV=1)

HSP 1 Score: 559 bits (1440), Expect = 1.29e-197
Identity = 273/386 (70.73%), Postives = 309/386 (80.05%), Query Frame = 0


Query: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
           MENSK RDWTALDYDVLGVILNKMVSLYDYLQFS+VCKSWYF+AL HKHQRSII SK PQ
Sbjct: 1   MENSKSRDWTALDYDVLGVILNKMVSLYDYLQFSLVCKSWYFLALHHKHQRSIIASKVPQ 60

Query: 61  LPMLIVPSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN 120
           LPMLIVPSKDGLE QHCLYD   N  R VDFKFCFNKRCCGSSFGWLIM +ETL + LFN
Sbjct: 61  LPMLIVPSKDGLEKQHCLYDLTTNIVRSVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFN 120

Query: 121 PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND 180
           PFSG VI LP +   D+ ++ P  I+KAILTKDPSLYPNDYMVV I+ +Y RLCL+RAND
Sbjct: 121 PFSGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRAND 180

Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
           K+WTY YP PNIPF DIN+  DT+YATEN++ VWKVEV+N +DESSSISIS+KMVH KR 
Sbjct: 181 KTWTYYYPTPNIPFNDINICRDTIYATENDLDVWKVEVQNSEDESSSISISVKMVHTKRI 240

Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
                +YITESSKGELL+VLR  +  + Q ET  F+VYKLI E E+++ RAV++KSLDGD
Sbjct: 241 RYIGTAYITESSKGELLVVLRIFNSGEEQFETVDFEVYKLIHENEDELRRAVEVKSLDGD 300

Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFI-NGYYNYIPNL---EQDSGIFNLEDKRFANHY 360
           A+FIGDSQSICVSTK F  CLPN IYF  N Y N +       QD G+FN ED  F +HY
Sbjct: 301 AIFIGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHY 360

Query: 361 IRDPAHKNLPQPIWIIPTICSKDFED 382
           I DPA KNLP P+WIIPTICSKD +D
Sbjct: 361 IADPAQKNLPSPMWIIPTICSKDLDD 386

[Close]

BLAST of Csor.00g030200 vs. ExPASy TrEMBL
Match: A0A6J1E923 (probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 PE=4 SV=1)

HSP 1 Score: 555 bits (1430), Expect = 8.50e-196
Identity = 273/385 (70.91%), Postives = 307/385 (79.74%), Query Frame = 0


Query: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
           MENS  RDWTALDYDVLGVILNKMVSLYDYLQF++VCKSWYF+ALRHKH+RSIITSK  Q
Sbjct: 1   MENSNSRDWTALDYDVLGVILNKMVSLYDYLQFNLVCKSWYFLALRHKHERSIITSKVTQ 60

Query: 61  LPMLIVPSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN 120
           LPMLIVPSKDGLE QHCLYD  +N  RPVDFKFCFNKRCCGSSFGWLIM +ETL + LFN
Sbjct: 61  LPMLIVPSKDGLEKQHCLYDLTRNVVRPVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFN 120

Query: 121 PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND 180
           PFSGTVI LP +   D+ ++ P  I+KAILTKDPSLYPNDYMVVAI+ +Y RLCL+RAND
Sbjct: 121 PFSGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVAIFGTYKRLCLIRAND 180

Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
           K+WTY YP PNIPF DIN+  DTLYATE  + VWKVEV+N +DESSSI IS+KMVH    
Sbjct: 181 KTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEM 240

Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
              V SYITESSKGELL+VLR +   + Q ET  F+VYKLI E E++M RAV++KSLDGD
Sbjct: 241 GHLVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEVKSLDGD 300

Query: 301 AMFIGDSQSICVSTKYFPKCLPNCIYFI-NGYYNYIPNL---EQDSGIFNLEDKRFANHY 360
           A+FIGDSQSICVSTK FP CLPN IYF  N Y N +       QD G FN E+  F + Y
Sbjct: 301 AIFIGDSQSICVSTKEFPGCLPNRIYFTDNRYVNLVVGKLDGTQDLGTFNFENGSFEDQY 360

Query: 361 IRDPAHKNLPQPIWIIPTICSKDFE 381
           I DPA KNLP PIWIIPTICSKD +
Sbjct: 361 IADPAQKNLPSPIWIIPTICSKDLD 385

[Close]

BLAST of Csor.00g030200 vs. ExPASy TrEMBL
Match: A0A6J1E5W8 (uncharacterized protein LOC111431008 OS=Cucurbita moschata OX=3662 GN=LOC111431008 PE=4 SV=1)

HSP 1 Score: 469 bits (1206), Expect = 4.33e-163
Identity = 229/318 (72.01%), Postives = 257/318 (80.82%), Query Frame = 0


Query: 1   MENSKFRDWTALDYDVLGVILNKMVSLYDYLQFSIVCKSWYFVALRHKHQRSIITSKFPQ 60
           MENSK RDWT LDYDVLGVILNKMVSLYDY QFS+VCKSWYF ALRHKHQRSII SK PQ
Sbjct: 1   MENSKSRDWTTLDYDVLGVILNKMVSLYDYFQFSLVCKSWYFHALRHKHQRSIIASKVPQ 60

Query: 61  LPMLIVPSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFN 120
           L MLIVP +DG E QHCLYD  +N  R VDFKFCFNKRC GSSFGWLIM +ETL + LFN
Sbjct: 61  LAMLIVPLEDGFEKQHCLYDLTRNIVRSVDFKFCFNKRCRGSSFGWLIMRDETLGIVLFN 120

Query: 121 PFSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRAND 180
           PFSGTVI LP +   D+ ++ P  I+KAILTKDPSLYPNDYMVV I+ +Y RLCL+RAND
Sbjct: 121 PFSGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRAND 180

Query: 181 KSWTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRT 240
           K+WTY YP PNIPF DIN+  DTLYATE  + VWKVEV+N +DESSSI IS+KMVH    
Sbjct: 181 KTWTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEM 240

Query: 241 NDFVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGD 300
              V SYITESSKGELL+VLR +   + Q ET  F+VYKLI E E++M RAV++KSLDGD
Sbjct: 241 GHMVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEIKSLDGD 300

Query: 301 AMFIGDSQSICVSTKYFP 318
           A+FIGDSQSICVSTK FP
Sbjct: 301 AIFIGDSQSICVSTKEFP 318

[Close]

BLAST of Csor.00g030200 vs. TAIR 10
Match: AT1G68960.1 (Protein of unknown function (DUF295) )

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-06
Identity = 89/355 (25.07%), Postives = 138/355 (38.87%), Query Frame = 0


Query: 70  DGLENQHCLYDPRKNRTRPVDFKF----CFNKRCCGSSFGWLIMC---EETLNLT-LFNP 129
           DG      LYDPRK     ++ K      +     GSS GWL +    + T+ LT + NP
Sbjct: 51  DGKVVNFNLYDPRKQEQVKIENKILSKEVYESHKLGSSRGWLALLNKKDSTVRLTNILNP 110

Query: 130 FSGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDK 189
            S  +I LPS+  D    +         +    S    +  VVA+    SR+ L R  D 
Sbjct: 111 -SKKIISLPSLTRDKYESH---------VNVSVSSSNEEDCVVAVKFYGSRVSLCRPGDS 170

Query: 190 SW-------------TYSYPEPNIPFKDINVSSDTLYATE-------------------N 249
            W             T  Y E +  F   N + D    T+                   +
Sbjct: 171 EWTRIDVPCPSFHSSTVIYSERDRRFYLNNCNPDYTGPTDFTPKSGLHTPVSGYKRFLFS 230

Query: 250 NMMVWKVEVKNRDDESSSISISLKMVHAKRTNDFVVSYITES--SKGELLL--VLRSISE 309
           N +    E++N +   S   I  ++V +     F+V++  ES   KGE+      R  + 
Sbjct: 231 NFLEEMPELEN-ERRLSRFRIQQQLVESASGQSFIVAWFVESLTDKGEVATWGDTRYNNN 290

Query: 310 EDSQLETTKFKVYKLIDECENDMLRAVKLKSLD-GD-AMFIGDSQSICVSTKYFPKCLPN 369
           +D   +T K  V +  +E      + +   + D GD  +F+G+++S C+S K FP   PN
Sbjct: 291 KDLCKKTHKIMVIRQDEE------QGIGPYTDDIGDLCIFLGENESFCLSAKDFPGLNPN 350

Query: 370 CIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAHKNLPQP---IWIIPTI 376
            +YF      Y        GI++L        Y+ D    + P P    W+ PTI
Sbjct: 351 SVYFAGHGSGY--------GIWDLASCTI--RYLSD----STPPPGRMFWLPPTI 374

The following BLAST results are available for this feature:

BLAST of Csor.00g030200 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g030200 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577578.1	1.35e-290	100.00	putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022923266.1	6.40e-289	99.48	probable F-box protein At1g65740 [Cucurbita moschata]	[more]
XP_023552957.1	3.04e-287	98.95	probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo]	[more]
XP_023553097.1	1.13e-217	81.62	uncharacterized protein LOC111810599 [Cucurbita pepo subsp. pepo]	[more]
XP_022923394.1	1.08e-215	81.06	uncharacterized protein LOC111431103 [Cucurbita moschata]	[more]

BLAST of Csor.00g030200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6C7	3.10e-289	99.48	probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 P...	[more]
A0A6J1E6A0	5.23e-216	81.06	uncharacterized protein LOC111431103 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A6J1E5P5	1.29e-197	70.73	probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 P...	[more]
A0A6J1E923	8.50e-196	70.91	probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 P...	[more]
A0A6J1E5W8	4.33e-163	72.01	uncharacterized protein LOC111431008 OS=Cucurbita moschata OX=3662 GN=LOC1114310...	[more]

BLAST of Csor.00g030200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68960.1	1.2e-06	25.07	Protein of unknown function (DUF295)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005174	Domain unknown function DUF295	PFAM	PF03478	DUF295	coord: 292..347 e-value: 4.0E-12 score: 45.6
None	No IPR available	PANTHER	PTHR44259:SF18	UBIQUITIN-PROTEIN LIGASE	coord: 6..373
None	No IPR available	PANTHER	PTHR44259	OS07G0183000 PROTEIN-RELATED	coord: 6..373
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 5..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g030200.m01	Csor.00g030200.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding