Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCATCGTTCCCTCGAAAGATGGTCTTGAAAAGCAGCATTGCTTATACGACCCCAGAAAAAATAGAACCCATCTTGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTTGTGGCTCCTCTTTTGGTTGGTTGATCATGTGTGAAGAGACACTCGATCTTACTTTATTCAATCCTTTTTCTGGGACTGTGATTCGTCTTCCTTCCATTTTCATAGAGGATGAACTTGATTATACTCCAGACCGCATAGTGAAAGCTATATTAACCAAAGATCCATCATTATATCCAAATGATTATATGGTTGTAGCTATCTATGGTTCATGTGCGAAGTTGTGCCTTATGAGATCAAATGACAAGAGTTGGACGTATTACTATCCAGAACCAAATATTCCTTTTAGTGATGTTAATGTTTATGGTGATACTATATATGCTTCAGGAGTTGATATGATGGTTTGGAAAGTTGAAGTTAAGATTAGAAATGATGAAAGTTCATCCATTTCTATTTTTGTAAGGATGGTCCACACCAAAAGTATCGATGATCTAACTAGATCTAATATTACAGTGTCTTCCAAAGGAGAGCTTTTGTTAGTTTTGAGGTCAATATCGGTAGAGGAAACACAATTAGAGACTAACAAGTTTAAAGTTTACAAACTTACTGAAGAGCGTGAAAATGGCATGCGAAAGGCCATAAAGATTAAGAGTTTAGATGGAGATGCTATGTTTATCGGCGACTCTCAATCCATCTGTGTATCAACTAAGGATTTTCCTAAATGTTTACCAAATTGTATATATTTCATGAATGGTTGTAACTATTGTGTTCCTAATTTAGTCCAGGATTCAGGCATATTCTACTTAGAAGATAAAGATTTTGGTGATCATTACATACGGGATCCTGCACATGAAAATTTACCTCCACCTATTTGGATCATCCCAACAATATGTTACAAAGATCTTAAGGTTTGA
mRNA sequence
ATGCTCATCGTTCCCTCGAAAGATGGTCTTGAAAAGCAGCATTGCTTATACGACCCCAGAAAAAATAGAACCCATCTTGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTTGTGGCTCCTCTTTTGGTTGGTTGATCATGTGTGAAGAGACACTCGATCTTACTTTATTCAATCCTTTTTCTGGGACTGTGATTCGTCTTCCTTCCATTTTCATAGAGGATGAACTTGATTATACTCCAGACCGCATAGTGAAAGCTATATTAACCAAAGATCCATCATTATATCCAAATGATTATATGGTTGTAGCTATCTATGGTTCATGTGCGAAGTTGTGCCTTATGAGATCAAATGACAAGAGTTGGACGTATTACTATCCAGAACCAAATATTCCTTTTAGTGATGTTAATGTTTATGGTGATACTATATATGCTTCAGGAGTTGATATGATGGTTTGGAAAGTTGAAGTTAAGATTAGAAATGATGAAAGTTCATCCATTTCTATTTTTGTAAGGATGGTCCACACCAAAAGTATCGATGATCTAACTAGATCTAATATTACAGTGTCTTCCAAAGGAGAGCTTTTGTTAGTTTTGAGGTCAATATCGGTAGAGGAAACACAATTAGAGACTAACAAGTTTAAAGTTTACAAACTTACTGAAGAGCGTGAAAATGGCATGCGAAAGGCCATAAAGATTAAGAGTTTAGATGGAGATGCTATGTTTATCGGCGACTCTCAATCCATCTGTGTATCAACTAAGGATTTTCCTAAATGTTTACCAAATTGTATATATTTCATGAATGGTTGTAACTATTGTGTTCCTAATTTAGTCCAGGATTCAGGCATATTCTACTTAGAAGATAAAGATTTTGGTGATCATTACATACGGGATCCTGCACATGAAAATTTACCTCCACCTATTTGGATCATCCCAACAATATGTTACAAAGATCTTAAGGTTTGA
Coding sequence (CDS)
ATGCTCATCGTTCCCTCGAAAGATGGTCTTGAAAAGCAGCATTGCTTATACGACCCCAGAAAAAATAGAACCCATCTTGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTTGTGGCTCCTCTTTTGGTTGGTTGATCATGTGTGAAGAGACACTCGATCTTACTTTATTCAATCCTTTTTCTGGGACTGTGATTCGTCTTCCTTCCATTTTCATAGAGGATGAACTTGATTATACTCCAGACCGCATAGTGAAAGCTATATTAACCAAAGATCCATCATTATATCCAAATGATTATATGGTTGTAGCTATCTATGGTTCATGTGCGAAGTTGTGCCTTATGAGATCAAATGACAAGAGTTGGACGTATTACTATCCAGAACCAAATATTCCTTTTAGTGATGTTAATGTTTATGGTGATACTATATATGCTTCAGGAGTTGATATGATGGTTTGGAAAGTTGAAGTTAAGATTAGAAATGATGAAAGTTCATCCATTTCTATTTTTGTAAGGATGGTCCACACCAAAAGTATCGATGATCTAACTAGATCTAATATTACAGTGTCTTCCAAAGGAGAGCTTTTGTTAGTTTTGAGGTCAATATCGGTAGAGGAAACACAATTAGAGACTAACAAGTTTAAAGTTTACAAACTTACTGAAGAGCGTGAAAATGGCATGCGAAAGGCCATAAAGATTAAGAGTTTAGATGGAGATGCTATGTTTATCGGCGACTCTCAATCCATCTGTGTATCAACTAAGGATTTTCCTAAATGTTTACCAAATTGTATATATTTCATGAATGGTTGTAACTATTGTGTTCCTAATTTAGTCCAGGATTCAGGCATATTCTACTTAGAAGATAAAGATTTTGGTGATCATTACATACGGGATCCTGCACATGAAAATTTACCTCCACCTATTTGGATCATCCCAACAATATGTTACAAAGATCTTAAGGTTTGA
Protein sequence
MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKSWTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDDLTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAMFIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAHENLPPPIWIIPTICYKDLKV
Homology
BLAST of Csor.00g030180 vs. ExPASy Swiss-Prot
Match:
Q9FLP7 (Putative F-box protein At5g55150 OS=Arabidopsis thaliana OX=3702 GN=At5g55150 PE=4 SV=2)
HSP 1 Score: 49.3 bits (116), Expect = 9.5e-05
Identity = 66/283 (23.32%), Postives = 115/283 (40.64%), Query Frame = 0
Query: 38 CGSSFGWLIMCEETLDLTLFNP---FSGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSL 97
CGS+ G+L+ T +T P F L S I + + + I KA+ SL
Sbjct: 92 CGSTLGFLLTKPVTKSVTSLPPLISFEDVQRLLQSQAIIPDSEALKNFIKKAV--SSTSL 151
Query: 98 YPNDYMVVAIYGSCAKLCLMRSNDKSWTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKV 157
++++V+ IY + KL R DK WT S + D ++ +GV + ++
Sbjct: 152 LDDEWVVLVIYNTDRKLAFCRRGDKQWTDLE-------SVASSVDDIVFCNGVFFAIDRL 211
Query: 158 EVKIRNDESSSISIFVRMVHTKSID-DLTRSNITVSSKGELLLVLRSISVEETQLETNKF 217
+ S++ + T D + + S EL +VL+ + + + F
Sbjct: 212 GEIYHCELSANNPKATPLCSTSPFRYDSCKKYLAESDYDELWVVLKKLELNDDCDFETSF 271
Query: 218 KVYKLTEERENGMRKAIKIKSLDGDAMFI---GDSQSICVSTKDFPKCLPNCIYFMNGCN 277
++Y+ E + K+ SL G A+F+ G ++ + F K N +YF++G +
Sbjct: 272 EIYEFNRE----TNEWTKVMSLRGKALFLSPQGRCIAVLAGERGFFK--DNSVYFIDGDD 331
Query: 278 YCVPNL-VQDSGIFYLEDKDFGDHYIRDPAHENLPPPIWIIPT 313
V Q+ +F E K Y P N W+ PT
Sbjct: 332 PSVGGSGPQNLSVFEWESKQIMKIY--QPRSWNC-QMFWVTPT 356
BLAST of Csor.00g030180 vs. NCBI nr
Match:
KAG6577580.1 (hypothetical protein SDJN03_25154, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 669 bits (1726), Expect = 5.27e-243
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0
Query: 1 MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF
Sbjct: 1 MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
Query: 61 SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS
Sbjct: 61 SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD
Sbjct: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM
Sbjct: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH 300
FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH
Sbjct: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH 300
Query: 301 ENLPPPIWIIPTICYKDLKV 320
ENLPPPIWIIPTICYKDLKV
Sbjct: 301 ENLPPPIWIIPTICYKDLKV 320
BLAST of Csor.00g030180 vs. NCBI nr
Match:
XP_022923394.1 (uncharacterized protein LOC111431103 [Cucurbita moschata])
HSP 1 Score: 640 bits (1652), Expect = 4.33e-231
Identity = 307/319 (96.24%), Postives = 310/319 (97.18%), Query Frame = 0
Query: 1 MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
MLIVPSKDGLEKQHCLYDPRKNRT VDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF
Sbjct: 40 MLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 99
Query: 61 SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
SGTVIRLPSIFIEDE DYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS
Sbjct: 100 SGTVIRLPSIFIEDEPDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 159
Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
WTYYYPEPNIPFSDVNVYGDTIYASGVDMM+WKVEVKIRNDESS ISI VR VHTKSIDD
Sbjct: 160 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMIWKVEVKIRNDESSLISISVRTVHTKSIDD 219
Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIK+KSLDGDAM
Sbjct: 220 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKVKSLDGDAM 279
Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH 300
FIGDSQSICVSTKDF KCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYI+DP H
Sbjct: 280 FIGDSQSICVSTKDFRKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIQDPTH 339
Query: 301 ENLPPPIWIIPTICYKDLK 319
ENLPPPIWIIPTIC KDLK
Sbjct: 340 ENLPPPIWIIPTICSKDLK 358
BLAST of Csor.00g030180 vs. NCBI nr
Match:
XP_023553097.1 (uncharacterized protein LOC111810599 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 629 bits (1622), Expect = 1.62e-226
Identity = 303/319 (94.98%), Postives = 306/319 (95.92%), Query Frame = 0
Query: 1 MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
MLIVPSKDGLEKQHCLYDP KNRT VDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF
Sbjct: 40 MLIVPSKDGLEKQHCLYDPTKNRTCPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 99
Query: 61 SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
SGT I LPSIFIEDE DYTPDRIVKAILTKDPSLYPNDYMV+AIYGSC KLCLMRSNDKS
Sbjct: 100 SGTEICLPSIFIEDEPDYTPDRIVKAILTKDPSLYPNDYMVIAIYGSCVKLCLMRSNDKS 159
Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
WTYYYPEPNIPFSDVNVYG+TIYASGVDMMVWKVEVKIRNDESSSISI VRMVHTKSIDD
Sbjct: 160 WTYYYPEPNIPFSDVNVYGNTIYASGVDMMVWKVEVKIRNDESSSISISVRMVHTKSIDD 219
Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
LTRSNITVSSKGELLLVLRSISVE TQLETNKFKVYKLTEERENGMRKAIK+KSLDGDAM
Sbjct: 220 LTRSNITVSSKGELLLVLRSISVEVTQLETNKFKVYKLTEERENGMRKAIKVKSLDGDAM 279
Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH 300
FIGDSQSICVSTKDFPKCLPNCIYFMNGCNY VPNLVQDSGIFYLEDKDFGDHYIRDPAH
Sbjct: 280 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYYVPNLVQDSGIFYLEDKDFGDHYIRDPAH 339
Query: 301 ENLPPPIWIIPTICYKDLK 319
ENLPPPIWIIPTIC KD
Sbjct: 340 ENLPPPIWIIPTICSKDFS 358
BLAST of Csor.00g030180 vs. NCBI nr
Match:
XP_023552957.1 (probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 525 bits (1351), Expect = 7.04e-185
Identity = 255/319 (79.94%), Postives = 277/319 (86.83%), Query Frame = 0
Query: 1 MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
MLIVPSKDGLEKQHCLYDPRKNRT VDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF
Sbjct: 63 MLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 122
Query: 61 SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
SGTVI LPSIFIEDE DY PDRIVKAILTKDP LYPNDYMVVAIY S ++LCLMR+NDKS
Sbjct: 123 SGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRANDKS 182
Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
WTY YPEPNIPF D+NV DT+YA+ +MMVWKVEVK R+DESSSISI ++MVH K +D
Sbjct: 183 WTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTND 242
Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
S IT SSKGELLLVLRSIS E++QLET KFKVYKL +E EN M +A+K+KSLDGDAM
Sbjct: 243 FVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAM 302
Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH 300
FIGDSQSICVSTK FPKCLPNCIYF+NG +PNL QDSGIF LEDK F +HYIRDPAH
Sbjct: 303 FIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAH 362
Query: 301 ENLPPPIWIIPTICYKDLK 319
+NLP PIWIIPTIC KD +
Sbjct: 363 KNLPQPIWIIPTICSKDFE 381
BLAST of Csor.00g030180 vs. NCBI nr
Match:
KAG6577578.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 522 bits (1345), Expect = 5.77e-184
Identity = 253/319 (79.31%), Postives = 277/319 (86.83%), Query Frame = 0
Query: 1 MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
MLIVPSKDGLE QHCLYDPRKNRT VDFKFCFNKRCCGSSFGWLIMCEETL+LTLFNPF
Sbjct: 63 MLIVPSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPF 122
Query: 61 SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
SGTVI LPSIFI+DE DY PDRIVKAILTKDPSLYPNDYMVVAIY S ++LCLMR+NDKS
Sbjct: 123 SGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKS 182
Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
WTY YPEPNIPF D+NV DT+YA+ +MMVWKVEVK R+DESSSISI ++MVH K +D
Sbjct: 183 WTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTND 242
Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
S IT SSKGELLLVLRSIS E++QLET KFKVYKL +E EN M +A+K+KSLDGDAM
Sbjct: 243 FVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAM 302
Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH 300
FIGDSQSICVSTK FPKCLPNCIYF+NG +PNL QDSGIF LEDK F +HYIRDPAH
Sbjct: 303 FIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAH 362
Query: 301 ENLPPPIWIIPTICYKDLK 319
+NLP PIWIIPTIC KD +
Sbjct: 363 KNLPQPIWIIPTICSKDFE 381
BLAST of Csor.00g030180 vs. ExPASy TrEMBL
Match:
A0A6J1E6A0 (uncharacterized protein LOC111431103 OS=Cucurbita moschata OX=3662 GN=LOC111431103 PE=4 SV=1)
HSP 1 Score: 640 bits (1652), Expect = 2.10e-231
Identity = 307/319 (96.24%), Postives = 310/319 (97.18%), Query Frame = 0
Query: 1 MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
MLIVPSKDGLEKQHCLYDPRKNRT VDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF
Sbjct: 40 MLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 99
Query: 61 SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
SGTVIRLPSIFIEDE DYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS
Sbjct: 100 SGTVIRLPSIFIEDEPDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 159
Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
WTYYYPEPNIPFSDVNVYGDTIYASGVDMM+WKVEVKIRNDESS ISI VR VHTKSIDD
Sbjct: 160 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMIWKVEVKIRNDESSLISISVRTVHTKSIDD 219
Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIK+KSLDGDAM
Sbjct: 220 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKVKSLDGDAM 279
Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH 300
FIGDSQSICVSTKDF KCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYI+DP H
Sbjct: 280 FIGDSQSICVSTKDFRKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIQDPTH 339
Query: 301 ENLPPPIWIIPTICYKDLK 319
ENLPPPIWIIPTIC KDLK
Sbjct: 340 ENLPPPIWIIPTICSKDLK 358
BLAST of Csor.00g030180 vs. ExPASy TrEMBL
Match:
A0A6J1E6C7 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 PE=4 SV=1)
HSP 1 Score: 522 bits (1345), Expect = 2.79e-184
Identity = 253/319 (79.31%), Postives = 278/319 (87.15%), Query Frame = 0
Query: 1 MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
MLIVPSK+GLEKQHCLYDPRKNRT VDFKFCFNKRCCGSSFGWLIMCEETL+LTLFNPF
Sbjct: 63 MLIVPSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPF 122
Query: 61 SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
SGTVI LPSIFI+DE DY PDRIVKAILTKDPSLYPNDYMVVAIY S ++LCLMR+NDKS
Sbjct: 123 SGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKS 182
Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
WTY YPEPNIPF D+NV DT+YA+ +MMVWKVEVK R+DESSSISI ++MVH K +D
Sbjct: 183 WTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTND 242
Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
S IT SSKGELLLVLRSIS E++QLET KFKVYKL +E EN M +A+K+KSLDGDAM
Sbjct: 243 FVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAM 302
Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH 300
FIGDSQSICVSTK FPKCLPNCIYF+NG +PNL QDSGIF LEDK F +HYIRDPAH
Sbjct: 303 FIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAH 362
Query: 301 ENLPPPIWIIPTICYKDLK 319
+NLP PIWIIPTIC KD +
Sbjct: 363 KNLPQPIWIIPTICSKDFE 381
BLAST of Csor.00g030180 vs. ExPASy TrEMBL
Match:
A0A6J1E923 (probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 PE=4 SV=1)
HSP 1 Score: 421 bits (1083), Expect = 4.21e-144
Identity = 209/322 (64.91%), Postives = 246/322 (76.40%), Query Frame = 0
Query: 1 MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
MLIVPSKDGLEKQHCLYD +N VDFKFCFNKRCCGSSFGWLIM +ETL + LFNPF
Sbjct: 63 MLIVPSKDGLEKQHCLYDLTRNVVRPVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPF 122
Query: 61 SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
SGTVI LP + D++++ P I+KAILTKDPSLYPNDYMVVAI+G+ +LCL+R+NDK+
Sbjct: 123 SGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVAIFGTYKRLCLIRANDKT 182
Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
WTYYYP PNIPF+D+N+ GDT+YA+ + VWKVEV+ DESSSI I V+MVHT +
Sbjct: 183 WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH 242
Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
L S IT SSKGELL+VLR + E Q ET F+VYKL E E+ MR+A+++KSLDGDA+
Sbjct: 243 LVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEVKSLDGDAI 302
Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNG--CNYCVPNL--VQDSGIFYLEDKDFGDHYIR 300
FIGDSQSICVSTK+FP CLPN IYF + N V L QD G F E+ F D YI
Sbjct: 303 FIGDSQSICVSTKEFPGCLPNRIYFTDNRYVNLVVGKLDGTQDLGTFNFENGSFEDQYIA 362
Query: 301 DPAHENLPPPIWIIPTICYKDL 318
DPA +NLP PIWIIPTIC KDL
Sbjct: 363 DPAQKNLPSPIWIIPTICSKDL 384
BLAST of Csor.00g030180 vs. ExPASy TrEMBL
Match:
A0A6J1E5P5 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 PE=4 SV=1)
HSP 1 Score: 420 bits (1079), Expect = 8.90e-144
Identity = 208/322 (64.60%), Postives = 246/322 (76.40%), Query Frame = 0
Query: 1 MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
MLIVPSKDGLEKQHCLYD N VDFKFCFNKRCCGSSFGWLIM +ETL + LFNPF
Sbjct: 63 MLIVPSKDGLEKQHCLYDLTTNIVRSVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPF 122
Query: 61 SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
SG VI LP + D++++ P I+KAILTKDPSLYPNDYMVV I+G+ +LCL+R+NDK+
Sbjct: 123 SGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRANDKT 182
Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
WTYYYP PNIPF+D+N+ DTIYA+ D+ VWKVEV+ DESSSISI V+MVHTK I
Sbjct: 183 WTYYYPTPNIPFNDINICRDTIYATENDLDVWKVEVQNSEDESSSISISVKMVHTKRIRY 242
Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
+ + IT SSKGELL+VLR + E Q ET F+VYKL E E+ +R+A+++KSLDGDA+
Sbjct: 243 IGTAYITESSKGELLVVLRIFNSGEEQFETVDFEVYKLIHENEDELRRAVEVKSLDGDAI 302
Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNG--CNYCVPNL--VQDSGIFYLEDKDFGDHYIR 300
FIGDSQSICVSTK+F CLPN IYF + N V L QD G+F ED F DHYI
Sbjct: 303 FIGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIA 362
Query: 301 DPAHENLPPPIWIIPTICYKDL 318
DPA +NLP P+WIIPTIC KDL
Sbjct: 363 DPAQKNLPSPMWIIPTICSKDL 384
BLAST of Csor.00g030180 vs. ExPASy TrEMBL
Match:
A0A6J1EBA6 (F-box protein At4g35733-like OS=Cucurbita moschata OX=3662 GN=LOC111431009 PE=4 SV=1)
HSP 1 Score: 405 bits (1041), Expect = 6.15e-139
Identity = 202/322 (62.73%), Postives = 241/322 (74.84%), Query Frame = 0
Query: 1 MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
MLIVPSKDG EKQHCLYD N VDFKF FNKRCCGSSFGWLIM +ETL + LFNPF
Sbjct: 1 MLIVPSKDGPEKQHCLYDLTTNIVRSVDFKFYFNKRCCGSSFGWLIMRDETLGIVLFNPF 60
Query: 61 SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
SG VI LP + D++++ P I+KAILTKDPSLYPNDYMVV+I+G+ +L L+R+NDK+
Sbjct: 61 SGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVSIFGTYKRLYLIRANDKT 120
Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
WTYYYP PNIPF+D+N+ GDT+YA+ + VWKVEV+ DESSSI I V+MVHT +
Sbjct: 121 WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH 180
Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
+ S IT SSKGELL+VLR + E Q ET F+VYKL E E+ MR+A+++KSLDG A+
Sbjct: 181 MVTSYITESSKGELLIVLRILDSGEEQFETVGFEVYKLIHENEDEMRRAVEVKSLDGGAI 240
Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNG--CNYCVPNL--VQDSGIFYLEDKDFGDHYIR 300
FIGDSQSICVSTK+F CLPN IYF + N V L QD G+F ED F DHYI
Sbjct: 241 FIGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIA 300
Query: 301 DPAHENLPPPIWIIPTICYKDL 318
DPA +NLP P+WIIPTIC KDL
Sbjct: 301 DPAQKNLPSPMWIIPTICSKDL 322
BLAST of Csor.00g030180 vs. TAIR 10
Match:
AT5G55150.1 (Protein of unknown function (DUF295) )
HSP 1 Score: 49.3 bits (116), Expect = 6.7e-06
Identity = 66/283 (23.32%), Postives = 115/283 (40.64%), Query Frame = 0
Query: 38 CGSSFGWLIMCEETLDLTLFNP---FSGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSL 97
CGS+ G+L+ T +T P F L S I + + + I KA+ SL
Sbjct: 92 CGSTLGFLLTKPVTKSVTSLPPLISFEDVQRLLQSQAIIPDSEALKNFIKKAV--SSTSL 151
Query: 98 YPNDYMVVAIYGSCAKLCLMRSNDKSWTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKV 157
++++V+ IY + KL R DK WT S + D ++ +GV + ++
Sbjct: 152 LDDEWVVLVIYNTDRKLAFCRRGDKQWTDLE-------SVASSVDDIVFCNGVFFAIDRL 211
Query: 158 EVKIRNDESSSISIFVRMVHTKSID-DLTRSNITVSSKGELLLVLRSISVEETQLETNKF 217
+ S++ + T D + + S EL +VL+ + + + F
Sbjct: 212 GEIYHCELSANNPKATPLCSTSPFRYDSCKKYLAESDYDELWVVLKKLELNDDCDFETSF 271
Query: 218 KVYKLTEERENGMRKAIKIKSLDGDAMFI---GDSQSICVSTKDFPKCLPNCIYFMNGCN 277
++Y+ E + K+ SL G A+F+ G ++ + F K N +YF++G +
Sbjct: 272 EIYEFNRE----TNEWTKVMSLRGKALFLSPQGRCIAVLAGERGFFK--DNSVYFIDGDD 331
Query: 278 YCVPNL-VQDSGIFYLEDKDFGDHYIRDPAHENLPPPIWIIPT 313
V Q+ +F E K Y P N W+ PT
Sbjct: 332 PSVGGSGPQNLSVFEWESKQIMKIY--QPRSWNC-QMFWVTPT 356
BLAST of Csor.00g030180 vs. TAIR 10
Match:
AT1G68960.1 (Protein of unknown function (DUF295) )
HSP 1 Score: 43.1 bits (100), Expect = 4.8e-04
Identity = 27/78 (34.62%), Postives = 40/78 (51.28%), Query Frame = 0
Query: 240 MFIGDSQSICVSTKDFPKCLPNCIYFM-NGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDP 299
+F+G+++S C+S KDFP PN +YF +G Y + +L + I YL D
Sbjct: 312 IFLGENESFCLSAKDFPGLNPNSVYFAGHGSGYGIWDLASCT-IRYLSD----------- 371
Query: 300 AHENLPPP---IWIIPTI 314
+ PPP W+ PTI
Sbjct: 372 ---STPPPGRMFWLPPTI 374
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FLP7 | 9.5e-05 | 23.32 | Putative F-box protein At5g55150 OS=Arabidopsis thaliana OX=3702 GN=At5g55150 PE... | [more] |
Match Name | E-value | Identity | Description | |
KAG6577580.1 | 5.27e-243 | 100.00 | hypothetical protein SDJN03_25154, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022923394.1 | 4.33e-231 | 96.24 | uncharacterized protein LOC111431103 [Cucurbita moschata] | [more] |
XP_023553097.1 | 1.62e-226 | 94.98 | uncharacterized protein LOC111810599 [Cucurbita pepo subsp. pepo] | [more] |
XP_023552957.1 | 7.04e-185 | 79.94 | probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo] | [more] |
KAG6577578.1 | 5.77e-184 | 79.31 | putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E6A0 | 2.10e-231 | 96.24 | uncharacterized protein LOC111431103 OS=Cucurbita moschata OX=3662 GN=LOC1114311... | [more] |
A0A6J1E6C7 | 2.79e-184 | 79.31 | probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 P... | [more] |
A0A6J1E923 | 4.21e-144 | 64.91 | probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 P... | [more] |
A0A6J1E5P5 | 8.90e-144 | 64.60 | probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 P... | [more] |
A0A6J1EBA6 | 6.15e-139 | 62.73 | F-box protein At4g35733-like OS=Cucurbita moschata OX=3662 GN=LOC111431009 PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |
AT5G55150.1 | 6.7e-06 | 23.32 | Protein of unknown function (DUF295) | [more] |
AT1G68960.1 | 4.8e-04 | 34.62 | Protein of unknown function (DUF295) | [more] |