Csor.00g030180 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g030180
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionDUF295 domain-containing protein
LocationCsor_Chr16: 7543232 .. 7544194 (-)
RNA-Seq ExpressionCsor.00g030180
SyntenyCsor.00g030180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCATCGTTCCCTCGAAAGATGGTCTTGAAAAGCAGCATTGCTTATACGACCCCAGAAAAAATAGAACCCATCTTGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTTGTGGCTCCTCTTTTGGTTGGTTGATCATGTGTGAAGAGACACTCGATCTTACTTTATTCAATCCTTTTTCTGGGACTGTGATTCGTCTTCCTTCCATTTTCATAGAGGATGAACTTGATTATACTCCAGACCGCATAGTGAAAGCTATATTAACCAAAGATCCATCATTATATCCAAATGATTATATGGTTGTAGCTATCTATGGTTCATGTGCGAAGTTGTGCCTTATGAGATCAAATGACAAGAGTTGGACGTATTACTATCCAGAACCAAATATTCCTTTTAGTGATGTTAATGTTTATGGTGATACTATATATGCTTCAGGAGTTGATATGATGGTTTGGAAAGTTGAAGTTAAGATTAGAAATGATGAAAGTTCATCCATTTCTATTTTTGTAAGGATGGTCCACACCAAAAGTATCGATGATCTAACTAGATCTAATATTACAGTGTCTTCCAAAGGAGAGCTTTTGTTAGTTTTGAGGTCAATATCGGTAGAGGAAACACAATTAGAGACTAACAAGTTTAAAGTTTACAAACTTACTGAAGAGCGTGAAAATGGCATGCGAAAGGCCATAAAGATTAAGAGTTTAGATGGAGATGCTATGTTTATCGGCGACTCTCAATCCATCTGTGTATCAACTAAGGATTTTCCTAAATGTTTACCAAATTGTATATATTTCATGAATGGTTGTAACTATTGTGTTCCTAATTTAGTCCAGGATTCAGGCATATTCTACTTAGAAGATAAAGATTTTGGTGATCATTACATACGGGATCCTGCACATGAAAATTTACCTCCACCTATTTGGATCATCCCAACAATATGTTACAAAGATCTTAAGGTTTGA

mRNA sequence

ATGCTCATCGTTCCCTCGAAAGATGGTCTTGAAAAGCAGCATTGCTTATACGACCCCAGAAAAAATAGAACCCATCTTGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTTGTGGCTCCTCTTTTGGTTGGTTGATCATGTGTGAAGAGACACTCGATCTTACTTTATTCAATCCTTTTTCTGGGACTGTGATTCGTCTTCCTTCCATTTTCATAGAGGATGAACTTGATTATACTCCAGACCGCATAGTGAAAGCTATATTAACCAAAGATCCATCATTATATCCAAATGATTATATGGTTGTAGCTATCTATGGTTCATGTGCGAAGTTGTGCCTTATGAGATCAAATGACAAGAGTTGGACGTATTACTATCCAGAACCAAATATTCCTTTTAGTGATGTTAATGTTTATGGTGATACTATATATGCTTCAGGAGTTGATATGATGGTTTGGAAAGTTGAAGTTAAGATTAGAAATGATGAAAGTTCATCCATTTCTATTTTTGTAAGGATGGTCCACACCAAAAGTATCGATGATCTAACTAGATCTAATATTACAGTGTCTTCCAAAGGAGAGCTTTTGTTAGTTTTGAGGTCAATATCGGTAGAGGAAACACAATTAGAGACTAACAAGTTTAAAGTTTACAAACTTACTGAAGAGCGTGAAAATGGCATGCGAAAGGCCATAAAGATTAAGAGTTTAGATGGAGATGCTATGTTTATCGGCGACTCTCAATCCATCTGTGTATCAACTAAGGATTTTCCTAAATGTTTACCAAATTGTATATATTTCATGAATGGTTGTAACTATTGTGTTCCTAATTTAGTCCAGGATTCAGGCATATTCTACTTAGAAGATAAAGATTTTGGTGATCATTACATACGGGATCCTGCACATGAAAATTTACCTCCACCTATTTGGATCATCCCAACAATATGTTACAAAGATCTTAAGGTTTGA

Coding sequence (CDS)

ATGCTCATCGTTCCCTCGAAAGATGGTCTTGAAAAGCAGCATTGCTTATACGACCCCAGAAAAAATAGAACCCATCTTGTTGACTTCAAATTTTGCTTCAACAAAAGGTGTTGTGGCTCCTCTTTTGGTTGGTTGATCATGTGTGAAGAGACACTCGATCTTACTTTATTCAATCCTTTTTCTGGGACTGTGATTCGTCTTCCTTCCATTTTCATAGAGGATGAACTTGATTATACTCCAGACCGCATAGTGAAAGCTATATTAACCAAAGATCCATCATTATATCCAAATGATTATATGGTTGTAGCTATCTATGGTTCATGTGCGAAGTTGTGCCTTATGAGATCAAATGACAAGAGTTGGACGTATTACTATCCAGAACCAAATATTCCTTTTAGTGATGTTAATGTTTATGGTGATACTATATATGCTTCAGGAGTTGATATGATGGTTTGGAAAGTTGAAGTTAAGATTAGAAATGATGAAAGTTCATCCATTTCTATTTTTGTAAGGATGGTCCACACCAAAAGTATCGATGATCTAACTAGATCTAATATTACAGTGTCTTCCAAAGGAGAGCTTTTGTTAGTTTTGAGGTCAATATCGGTAGAGGAAACACAATTAGAGACTAACAAGTTTAAAGTTTACAAACTTACTGAAGAGCGTGAAAATGGCATGCGAAAGGCCATAAAGATTAAGAGTTTAGATGGAGATGCTATGTTTATCGGCGACTCTCAATCCATCTGTGTATCAACTAAGGATTTTCCTAAATGTTTACCAAATTGTATATATTTCATGAATGGTTGTAACTATTGTGTTCCTAATTTAGTCCAGGATTCAGGCATATTCTACTTAGAAGATAAAGATTTTGGTGATCATTACATACGGGATCCTGCACATGAAAATTTACCTCCACCTATTTGGATCATCCCAACAATATGTTACAAAGATCTTAAGGTTTGA

Protein sequence

MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPFSGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKSWTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDDLTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAMFIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAHENLPPPIWIIPTICYKDLKV
Homology
BLAST of Csor.00g030180 vs. ExPASy Swiss-Prot
Match: Q9FLP7 (Putative F-box protein At5g55150 OS=Arabidopsis thaliana OX=3702 GN=At5g55150 PE=4 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 9.5e-05
Identity = 66/283 (23.32%), Postives = 115/283 (40.64%), Query Frame = 0

Query: 38  CGSSFGWLIMCEETLDLTLFNP---FSGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSL 97
           CGS+ G+L+    T  +T   P   F      L S  I  + +   + I KA+     SL
Sbjct: 92  CGSTLGFLLTKPVTKSVTSLPPLISFEDVQRLLQSQAIIPDSEALKNFIKKAV--SSTSL 151

Query: 98  YPNDYMVVAIYGSCAKLCLMRSNDKSWTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKV 157
             ++++V+ IY +  KL   R  DK WT          S  +   D ++ +GV   + ++
Sbjct: 152 LDDEWVVLVIYNTDRKLAFCRRGDKQWTDLE-------SVASSVDDIVFCNGVFFAIDRL 211

Query: 158 EVKIRNDESSSISIFVRMVHTKSID-DLTRSNITVSSKGELLLVLRSISVEETQLETNKF 217
                 + S++      +  T     D  +  +  S   EL +VL+ + + +       F
Sbjct: 212 GEIYHCELSANNPKATPLCSTSPFRYDSCKKYLAESDYDELWVVLKKLELNDDCDFETSF 271

Query: 218 KVYKLTEERENGMRKAIKIKSLDGDAMFI---GDSQSICVSTKDFPKCLPNCIYFMNGCN 277
           ++Y+   E      +  K+ SL G A+F+   G   ++    + F K   N +YF++G +
Sbjct: 272 EIYEFNRE----TNEWTKVMSLRGKALFLSPQGRCIAVLAGERGFFK--DNSVYFIDGDD 331

Query: 278 YCVPNL-VQDSGIFYLEDKDFGDHYIRDPAHENLPPPIWIIPT 313
             V     Q+  +F  E K     Y   P   N     W+ PT
Sbjct: 332 PSVGGSGPQNLSVFEWESKQIMKIY--QPRSWNC-QMFWVTPT 356

BLAST of Csor.00g030180 vs. NCBI nr
Match: KAG6577580.1 (hypothetical protein SDJN03_25154, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 669 bits (1726), Expect = 5.27e-243
Identity = 320/320 (100.00%), Postives = 320/320 (100.00%), Query Frame = 0

Query: 1   MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
           MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF
Sbjct: 1   MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60

Query: 61  SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
           SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS
Sbjct: 61  SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120

Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
           WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD
Sbjct: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180

Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
           LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM
Sbjct: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240

Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH 300
           FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH
Sbjct: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH 300

Query: 301 ENLPPPIWIIPTICYKDLKV 320
           ENLPPPIWIIPTICYKDLKV
Sbjct: 301 ENLPPPIWIIPTICYKDLKV 320

BLAST of Csor.00g030180 vs. NCBI nr
Match: XP_022923394.1 (uncharacterized protein LOC111431103 [Cucurbita moschata])

HSP 1 Score: 640 bits (1652), Expect = 4.33e-231
Identity = 307/319 (96.24%), Postives = 310/319 (97.18%), Query Frame = 0

Query: 1   MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
           MLIVPSKDGLEKQHCLYDPRKNRT  VDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF
Sbjct: 40  MLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 99

Query: 61  SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
           SGTVIRLPSIFIEDE DYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS
Sbjct: 100 SGTVIRLPSIFIEDEPDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 159

Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
           WTYYYPEPNIPFSDVNVYGDTIYASGVDMM+WKVEVKIRNDESS ISI VR VHTKSIDD
Sbjct: 160 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMIWKVEVKIRNDESSLISISVRTVHTKSIDD 219

Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
           LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIK+KSLDGDAM
Sbjct: 220 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKVKSLDGDAM 279

Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH 300
           FIGDSQSICVSTKDF KCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYI+DP H
Sbjct: 280 FIGDSQSICVSTKDFRKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIQDPTH 339

Query: 301 ENLPPPIWIIPTICYKDLK 319
           ENLPPPIWIIPTIC KDLK
Sbjct: 340 ENLPPPIWIIPTICSKDLK 358

BLAST of Csor.00g030180 vs. NCBI nr
Match: XP_023553097.1 (uncharacterized protein LOC111810599 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 629 bits (1622), Expect = 1.62e-226
Identity = 303/319 (94.98%), Postives = 306/319 (95.92%), Query Frame = 0

Query: 1   MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
           MLIVPSKDGLEKQHCLYDP KNRT  VDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF
Sbjct: 40  MLIVPSKDGLEKQHCLYDPTKNRTCPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 99

Query: 61  SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
           SGT I LPSIFIEDE DYTPDRIVKAILTKDPSLYPNDYMV+AIYGSC KLCLMRSNDKS
Sbjct: 100 SGTEICLPSIFIEDEPDYTPDRIVKAILTKDPSLYPNDYMVIAIYGSCVKLCLMRSNDKS 159

Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
           WTYYYPEPNIPFSDVNVYG+TIYASGVDMMVWKVEVKIRNDESSSISI VRMVHTKSIDD
Sbjct: 160 WTYYYPEPNIPFSDVNVYGNTIYASGVDMMVWKVEVKIRNDESSSISISVRMVHTKSIDD 219

Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
           LTRSNITVSSKGELLLVLRSISVE TQLETNKFKVYKLTEERENGMRKAIK+KSLDGDAM
Sbjct: 220 LTRSNITVSSKGELLLVLRSISVEVTQLETNKFKVYKLTEERENGMRKAIKVKSLDGDAM 279

Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH 300
           FIGDSQSICVSTKDFPKCLPNCIYFMNGCNY VPNLVQDSGIFYLEDKDFGDHYIRDPAH
Sbjct: 280 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYYVPNLVQDSGIFYLEDKDFGDHYIRDPAH 339

Query: 301 ENLPPPIWIIPTICYKDLK 319
           ENLPPPIWIIPTIC KD  
Sbjct: 340 ENLPPPIWIIPTICSKDFS 358

BLAST of Csor.00g030180 vs. NCBI nr
Match: XP_023552957.1 (probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 525 bits (1351), Expect = 7.04e-185
Identity = 255/319 (79.94%), Postives = 277/319 (86.83%), Query Frame = 0

Query: 1   MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
           MLIVPSKDGLEKQHCLYDPRKNRT  VDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF
Sbjct: 63  MLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 122

Query: 61  SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
           SGTVI LPSIFIEDE DY PDRIVKAILTKDP LYPNDYMVVAIY S ++LCLMR+NDKS
Sbjct: 123 SGTVICLPSIFIEDEPDYAPDRIVKAILTKDPWLYPNDYMVVAIYSSYSRLCLMRANDKS 182

Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
           WTY YPEPNIPF D+NV  DT+YA+  +MMVWKVEVK R+DESSSISI ++MVH K  +D
Sbjct: 183 WTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTND 242

Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
              S IT SSKGELLLVLRSIS E++QLET KFKVYKL +E EN M +A+K+KSLDGDAM
Sbjct: 243 FVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAM 302

Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH 300
           FIGDSQSICVSTK FPKCLPNCIYF+NG    +PNL QDSGIF LEDK F +HYIRDPAH
Sbjct: 303 FIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAH 362

Query: 301 ENLPPPIWIIPTICYKDLK 319
           +NLP PIWIIPTIC KD +
Sbjct: 363 KNLPQPIWIIPTICSKDFE 381

BLAST of Csor.00g030180 vs. NCBI nr
Match: KAG6577578.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 522 bits (1345), Expect = 5.77e-184
Identity = 253/319 (79.31%), Postives = 277/319 (86.83%), Query Frame = 0

Query: 1   MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
           MLIVPSKDGLE QHCLYDPRKNRT  VDFKFCFNKRCCGSSFGWLIMCEETL+LTLFNPF
Sbjct: 63  MLIVPSKDGLENQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPF 122

Query: 61  SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
           SGTVI LPSIFI+DE DY PDRIVKAILTKDPSLYPNDYMVVAIY S ++LCLMR+NDKS
Sbjct: 123 SGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKS 182

Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
           WTY YPEPNIPF D+NV  DT+YA+  +MMVWKVEVK R+DESSSISI ++MVH K  +D
Sbjct: 183 WTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTND 242

Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
              S IT SSKGELLLVLRSIS E++QLET KFKVYKL +E EN M +A+K+KSLDGDAM
Sbjct: 243 FVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAM 302

Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH 300
           FIGDSQSICVSTK FPKCLPNCIYF+NG    +PNL QDSGIF LEDK F +HYIRDPAH
Sbjct: 303 FIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAH 362

Query: 301 ENLPPPIWIIPTICYKDLK 319
           +NLP PIWIIPTIC KD +
Sbjct: 363 KNLPQPIWIIPTICSKDFE 381

BLAST of Csor.00g030180 vs. ExPASy TrEMBL
Match: A0A6J1E6A0 (uncharacterized protein LOC111431103 OS=Cucurbita moschata OX=3662 GN=LOC111431103 PE=4 SV=1)

HSP 1 Score: 640 bits (1652), Expect = 2.10e-231
Identity = 307/319 (96.24%), Postives = 310/319 (97.18%), Query Frame = 0

Query: 1   MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
           MLIVPSKDGLEKQHCLYDPRKNRT  VDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF
Sbjct: 40  MLIVPSKDGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 99

Query: 61  SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
           SGTVIRLPSIFIEDE DYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS
Sbjct: 100 SGTVIRLPSIFIEDEPDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 159

Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
           WTYYYPEPNIPFSDVNVYGDTIYASGVDMM+WKVEVKIRNDESS ISI VR VHTKSIDD
Sbjct: 160 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMIWKVEVKIRNDESSLISISVRTVHTKSIDD 219

Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
           LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIK+KSLDGDAM
Sbjct: 220 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKVKSLDGDAM 279

Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH 300
           FIGDSQSICVSTKDF KCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYI+DP H
Sbjct: 280 FIGDSQSICVSTKDFRKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIQDPTH 339

Query: 301 ENLPPPIWIIPTICYKDLK 319
           ENLPPPIWIIPTIC KDLK
Sbjct: 340 ENLPPPIWIIPTICSKDLK 358

BLAST of Csor.00g030180 vs. ExPASy TrEMBL
Match: A0A6J1E6C7 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 PE=4 SV=1)

HSP 1 Score: 522 bits (1345), Expect = 2.79e-184
Identity = 253/319 (79.31%), Postives = 278/319 (87.15%), Query Frame = 0

Query: 1   MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
           MLIVPSK+GLEKQHCLYDPRKNRT  VDFKFCFNKRCCGSSFGWLIMCEETL+LTLFNPF
Sbjct: 63  MLIVPSKNGLEKQHCLYDPRKNRTRPVDFKFCFNKRCCGSSFGWLIMCEETLNLTLFNPF 122

Query: 61  SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
           SGTVI LPSIFI+DE DY PDRIVKAILTKDPSLYPNDYMVVAIY S ++LCLMR+NDKS
Sbjct: 123 SGTVICLPSIFIDDEPDYAPDRIVKAILTKDPSLYPNDYMVVAIYSSYSRLCLMRANDKS 182

Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
           WTY YPEPNIPF D+NV  DT+YA+  +MMVWKVEVK R+DESSSISI ++MVH K  +D
Sbjct: 183 WTYSYPEPNIPFKDINVSSDTLYATENNMMVWKVEVKNRDDESSSISISLKMVHAKRTND 242

Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
              S IT SSKGELLLVLRSIS E++QLET KFKVYKL +E EN M +A+K+KSLDGDAM
Sbjct: 243 FVVSYITESSKGELLLVLRSISEEDSQLETTKFKVYKLIDECENDMLRAVKLKSLDGDAM 302

Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDPAH 300
           FIGDSQSICVSTK FPKCLPNCIYF+NG    +PNL QDSGIF LEDK F +HYIRDPAH
Sbjct: 303 FIGDSQSICVSTKYFPKCLPNCIYFINGYYNYIPNLEQDSGIFNLEDKRFANHYIRDPAH 362

Query: 301 ENLPPPIWIIPTICYKDLK 319
           +NLP PIWIIPTIC KD +
Sbjct: 363 KNLPQPIWIIPTICSKDFE 381

BLAST of Csor.00g030180 vs. ExPASy TrEMBL
Match: A0A6J1E923 (probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 PE=4 SV=1)

HSP 1 Score: 421 bits (1083), Expect = 4.21e-144
Identity = 209/322 (64.91%), Postives = 246/322 (76.40%), Query Frame = 0

Query: 1   MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
           MLIVPSKDGLEKQHCLYD  +N    VDFKFCFNKRCCGSSFGWLIM +ETL + LFNPF
Sbjct: 63  MLIVPSKDGLEKQHCLYDLTRNVVRPVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPF 122

Query: 61  SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
           SGTVI LP +   D++++ P  I+KAILTKDPSLYPNDYMVVAI+G+  +LCL+R+NDK+
Sbjct: 123 SGTVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVAIFGTYKRLCLIRANDKT 182

Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
           WTYYYP PNIPF+D+N+ GDT+YA+   + VWKVEV+   DESSSI I V+MVHT  +  
Sbjct: 183 WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH 242

Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
           L  S IT SSKGELL+VLR +   E Q ET  F+VYKL  E E+ MR+A+++KSLDGDA+
Sbjct: 243 LVTSYITESSKGELLVVLRILDSGEEQFETVDFEVYKLIHENEDEMRRAVEVKSLDGDAI 302

Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNG--CNYCVPNL--VQDSGIFYLEDKDFGDHYIR 300
           FIGDSQSICVSTK+FP CLPN IYF +    N  V  L   QD G F  E+  F D YI 
Sbjct: 303 FIGDSQSICVSTKEFPGCLPNRIYFTDNRYVNLVVGKLDGTQDLGTFNFENGSFEDQYIA 362

Query: 301 DPAHENLPPPIWIIPTICYKDL 318
           DPA +NLP PIWIIPTIC KDL
Sbjct: 363 DPAQKNLPSPIWIIPTICSKDL 384

BLAST of Csor.00g030180 vs. ExPASy TrEMBL
Match: A0A6J1E5P5 (probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 PE=4 SV=1)

HSP 1 Score: 420 bits (1079), Expect = 8.90e-144
Identity = 208/322 (64.60%), Postives = 246/322 (76.40%), Query Frame = 0

Query: 1   MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
           MLIVPSKDGLEKQHCLYD   N    VDFKFCFNKRCCGSSFGWLIM +ETL + LFNPF
Sbjct: 63  MLIVPSKDGLEKQHCLYDLTTNIVRSVDFKFCFNKRCCGSSFGWLIMRDETLGIVLFNPF 122

Query: 61  SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
           SG VI LP +   D++++ P  I+KAILTKDPSLYPNDYMVV I+G+  +LCL+R+NDK+
Sbjct: 123 SGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVGIFGTYKRLCLIRANDKT 182

Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
           WTYYYP PNIPF+D+N+  DTIYA+  D+ VWKVEV+   DESSSISI V+MVHTK I  
Sbjct: 183 WTYYYPTPNIPFNDINICRDTIYATENDLDVWKVEVQNSEDESSSISISVKMVHTKRIRY 242

Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
           +  + IT SSKGELL+VLR  +  E Q ET  F+VYKL  E E+ +R+A+++KSLDGDA+
Sbjct: 243 IGTAYITESSKGELLVVLRIFNSGEEQFETVDFEVYKLIHENEDELRRAVEVKSLDGDAI 302

Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNG--CNYCVPNL--VQDSGIFYLEDKDFGDHYIR 300
           FIGDSQSICVSTK+F  CLPN IYF +    N  V  L   QD G+F  ED  F DHYI 
Sbjct: 303 FIGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIA 362

Query: 301 DPAHENLPPPIWIIPTICYKDL 318
           DPA +NLP P+WIIPTIC KDL
Sbjct: 363 DPAQKNLPSPMWIIPTICSKDL 384

BLAST of Csor.00g030180 vs. ExPASy TrEMBL
Match: A0A6J1EBA6 (F-box protein At4g35733-like OS=Cucurbita moschata OX=3662 GN=LOC111431009 PE=4 SV=1)

HSP 1 Score: 405 bits (1041), Expect = 6.15e-139
Identity = 202/322 (62.73%), Postives = 241/322 (74.84%), Query Frame = 0

Query: 1   MLIVPSKDGLEKQHCLYDPRKNRTHLVDFKFCFNKRCCGSSFGWLIMCEETLDLTLFNPF 60
           MLIVPSKDG EKQHCLYD   N    VDFKF FNKRCCGSSFGWLIM +ETL + LFNPF
Sbjct: 1   MLIVPSKDGPEKQHCLYDLTTNIVRSVDFKFYFNKRCCGSSFGWLIMRDETLGIVLFNPF 60

Query: 61  SGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSLYPNDYMVVAIYGSCAKLCLMRSNDKS 120
           SG VI LP +   D++++ P  I+KAILTKDPSLYPNDYMVV+I+G+  +L L+R+NDK+
Sbjct: 61  SGAVIYLPPVATYDDIEWIPGHIIKAILTKDPSLYPNDYMVVSIFGTYKRLYLIRANDKT 120

Query: 121 WTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKVEVKIRNDESSSISIFVRMVHTKSIDD 180
           WTYYYP PNIPF+D+N+ GDT+YA+   + VWKVEV+   DESSSI I V+MVHT  +  
Sbjct: 121 WTYYYPTPNIPFNDINICGDTLYATEYYLNVWKVEVENSEDESSSICISVKMVHTIEMGH 180

Query: 181 LTRSNITVSSKGELLLVLRSISVEETQLETNKFKVYKLTEERENGMRKAIKIKSLDGDAM 240
           +  S IT SSKGELL+VLR +   E Q ET  F+VYKL  E E+ MR+A+++KSLDG A+
Sbjct: 181 MVTSYITESSKGELLIVLRILDSGEEQFETVGFEVYKLIHENEDEMRRAVEVKSLDGGAI 240

Query: 241 FIGDSQSICVSTKDFPKCLPNCIYFMNG--CNYCVPNL--VQDSGIFYLEDKDFGDHYIR 300
           FIGDSQSICVSTK+F  CLPN IYF +    N  V  L   QD G+F  ED  F DHYI 
Sbjct: 241 FIGDSQSICVSTKEFAGCLPNRIYFTDNRYVNLVVGKLDGTQDLGVFNFEDGSFEDHYIA 300

Query: 301 DPAHENLPPPIWIIPTICYKDL 318
           DPA +NLP P+WIIPTIC KDL
Sbjct: 301 DPAQKNLPSPMWIIPTICSKDL 322

BLAST of Csor.00g030180 vs. TAIR 10
Match: AT5G55150.1 (Protein of unknown function (DUF295) )

HSP 1 Score: 49.3 bits (116), Expect = 6.7e-06
Identity = 66/283 (23.32%), Postives = 115/283 (40.64%), Query Frame = 0

Query: 38  CGSSFGWLIMCEETLDLTLFNP---FSGTVIRLPSIFIEDELDYTPDRIVKAILTKDPSL 97
           CGS+ G+L+    T  +T   P   F      L S  I  + +   + I KA+     SL
Sbjct: 92  CGSTLGFLLTKPVTKSVTSLPPLISFEDVQRLLQSQAIIPDSEALKNFIKKAV--SSTSL 151

Query: 98  YPNDYMVVAIYGSCAKLCLMRSNDKSWTYYYPEPNIPFSDVNVYGDTIYASGVDMMVWKV 157
             ++++V+ IY +  KL   R  DK WT          S  +   D ++ +GV   + ++
Sbjct: 152 LDDEWVVLVIYNTDRKLAFCRRGDKQWTDLE-------SVASSVDDIVFCNGVFFAIDRL 211

Query: 158 EVKIRNDESSSISIFVRMVHTKSID-DLTRSNITVSSKGELLLVLRSISVEETQLETNKF 217
                 + S++      +  T     D  +  +  S   EL +VL+ + + +       F
Sbjct: 212 GEIYHCELSANNPKATPLCSTSPFRYDSCKKYLAESDYDELWVVLKKLELNDDCDFETSF 271

Query: 218 KVYKLTEERENGMRKAIKIKSLDGDAMFI---GDSQSICVSTKDFPKCLPNCIYFMNGCN 277
           ++Y+   E      +  K+ SL G A+F+   G   ++    + F K   N +YF++G +
Sbjct: 272 EIYEFNRE----TNEWTKVMSLRGKALFLSPQGRCIAVLAGERGFFK--DNSVYFIDGDD 331

Query: 278 YCVPNL-VQDSGIFYLEDKDFGDHYIRDPAHENLPPPIWIIPT 313
             V     Q+  +F  E K     Y   P   N     W+ PT
Sbjct: 332 PSVGGSGPQNLSVFEWESKQIMKIY--QPRSWNC-QMFWVTPT 356

BLAST of Csor.00g030180 vs. TAIR 10
Match: AT1G68960.1 (Protein of unknown function (DUF295) )

HSP 1 Score: 43.1 bits (100), Expect = 4.8e-04
Identity = 27/78 (34.62%), Postives = 40/78 (51.28%), Query Frame = 0

Query: 240 MFIGDSQSICVSTKDFPKCLPNCIYFM-NGCNYCVPNLVQDSGIFYLEDKDFGDHYIRDP 299
           +F+G+++S C+S KDFP   PN +YF  +G  Y + +L   + I YL D           
Sbjct: 312 IFLGENESFCLSAKDFPGLNPNSVYFAGHGSGYGIWDLASCT-IRYLSD----------- 371

Query: 300 AHENLPPP---IWIIPTI 314
              + PPP    W+ PTI
Sbjct: 372 ---STPPPGRMFWLPPTI 374

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FLP79.5e-0523.32Putative F-box protein At5g55150 OS=Arabidopsis thaliana OX=3702 GN=At5g55150 PE... [more]
Match NameE-valueIdentityDescription
KAG6577580.15.27e-243100.00hypothetical protein SDJN03_25154, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022923394.14.33e-23196.24uncharacterized protein LOC111431103 [Cucurbita moschata][more]
XP_023553097.11.62e-22694.98uncharacterized protein LOC111810599 [Cucurbita pepo subsp. pepo][more]
XP_023552957.17.04e-18579.94probable F-box protein At1g65740 [Cucurbita pepo subsp. pepo][more]
KAG6577578.15.77e-18479.31putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia][more]
Match NameE-valueIdentityDescription
A0A6J1E6A02.10e-23196.24uncharacterized protein LOC111431103 OS=Cucurbita moschata OX=3662 GN=LOC1114311... [more]
A0A6J1E6C72.79e-18479.31probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431011 P... [more]
A0A6J1E9234.21e-14464.91probable F-box protein At4g22165 OS=Cucurbita moschata OX=3662 GN=LOC111431007 P... [more]
A0A6J1E5P58.90e-14464.60probable F-box protein At1g65740 OS=Cucurbita moschata OX=3662 GN=LOC111431012 P... [more]
A0A6J1EBA66.15e-13962.73F-box protein At4g35733-like OS=Cucurbita moschata OX=3662 GN=LOC111431009 PE=4 ... [more]
Match NameE-valueIdentityDescription
AT5G55150.16.7e-0623.32Protein of unknown function (DUF295) [more]
AT1G68960.14.8e-0434.62Protein of unknown function (DUF295) [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005174Domain unknown function DUF295PFAMPF03478DUF295coord: 231..283
e-value: 6.7E-13
score: 48.1
NoneNo IPR availablePANTHERPTHR44259OS07G0183000 PROTEIN-RELATEDcoord: 1..311
NoneNo IPR availablePANTHERPTHR44259:SF18UBIQUITIN-PROTEIN LIGASEcoord: 1..311

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g030180.m01Csor.00g030180.m01mRNA