Csor.00g029880 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGAACAACAAAAGGTTTCAGATTGAAAATCAAGCTTCCCAAGATCTTCAAACGGAGAACCACCTCCAACCCTTTTTCCAAGCTCTTCGCCCTCGCTACGGCGTCGTTTTCTCGCCCGGATGCGTACTCCCGGCTGAACCGGGTCCGGAACGGACCGGAAGCGGCGGCGCCGAAGGGGTATTTGGCCGTGCACGTCGGTGGAGCGGAGGATGAAAGGGAGAGACATCTTGTGCCGCTGATTTACTTCAACCATCCGATGTTTGGGAAATTGCTGCAGGCGGCGGAGAGGATTTATGGGTTTCAGTATCCGGGTCGGATCGTCATTCCGGTTGATGTGTCGGAGTTTGAGGAGGTTACCAATTGCATTGCCACGGCGGAGTACGGCTGCCGCAAACGTCGTAGCGGTGGCTACCGGTGGCGGAGCTGTGGAAAGTAG ATGCGAACAACAAAAGGTTTCAGATTGAAAATCAAGCTTCCCAAGATCTTCAAACGGAGAACCACCTCCAACCCTTTTTCCAAGCTCTTCGCCCTCGCTACGGCGTCGTTTTCTCGCCCGGATGCGTACTCCCGGCTGAACCGGGTCCGGAACGGACCGGAAGCGGCGGCGCCGAAGGGGTATTTGGCCGTGCACGTCGGTGGAGCGGAGGATGAAAGGGAGAGACATCTTGTGCCGCTGATTTACTTCAACCATCCGATGTTTGGGAAATTGCTGCAGGCGGCGGAGAGGATTTATGGGTTTCAGTATCCGGGTCGGATCGTCATTCCGGTTGATGTGTCGGAGTTTGAGGAGGTTACCAATTGCATTGCCACGGCGGAGTACGGCTGCCGCAAACGTCGTAGCGGTGGCTACCGGTGGCGGAGCTGTGGAAAGTAG ATGCGAACAACAAAAGGTTTCAGATTGAAAATCAAGCTTCCCAAGATCTTCAAACGGAGAACCACCTCCAACCCTTTTTCCAAGCTCTTCGCCCTCGCTACGGCGTCGTTTTCTCGCCCGGATGCGTACTCCCGGCTGAACCGGGTCCGGAACGGACCGGAAGCGGCGGCGCCGAAGGGGTATTTGGCCGTGCACGTCGGTGGAGCGGAGGATGAAAGGGAGAGACATCTTGTGCCGCTGATTTACTTCAACCATCCGATGTTTGGGAAATTGCTGCAGGCGGCGGAGAGGATTTATGGGTTTCAGTATCCGGGTCGGATCGTCATTCCGGTTGATGTGTCGGAGTTTGAGGAGGTTACCAATTGCATTGCCACGGCGGAGTACGGCTGCCGCAAACGTCGTAGCGGTGGCTACCGGTGGCGGAGCTGTGGAAAGTAG MRTTKGFRLKIKLPKIFKRRTTSNPFSKLFALATASFSRPDAYSRLNRVRNGPEAAAPKGYLAVHVGGAEDERERHLVPLIYFNHPMFGKLLQAAERIYGFQYPGRIVIPVDVSEFEEVTNCIATAEYGCRKRRSGGYRWRSCGK Homology
BLAST of Csor.00g029880 vs. ExPASy Swiss-Prot
Match: O22150 (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.5e-13 Identity = 38/88 (43.18%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of Csor.00g029880 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 8.1e-12 Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 0
BLAST of Csor.00g029880 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 6.4e-09 Identity = 32/71 (45.07%), Postives = 45/71 (63.38%), Query Frame = 0
BLAST of Csor.00g029880 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 5.4e-08 Identity = 26/70 (37.14%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Csor.00g029880 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 4.6e-07 Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 0
BLAST of Csor.00g029880 vs. NCBI nr
Match: KAG6577610.1 (Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015657.1 Auxin-responsive protein SAUR36, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 298 bits (762), Expect = 7.28e-102 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of Csor.00g029880 vs. NCBI nr
Match: XP_022923260.1 (auxin-responsive protein SAUR32-like [Cucurbita moschata]) HSP 1 Score: 292 bits (747), Expect = 1.41e-99 Identity = 142/145 (97.93%), Postives = 142/145 (97.93%), Query Frame = 0
BLAST of Csor.00g029880 vs. NCBI nr
Match: XP_023552967.1 (auxin-responsive protein SAUR32-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 286 bits (733), Expect = 1.93e-97 Identity = 140/145 (96.55%), Postives = 141/145 (97.24%), Query Frame = 0
BLAST of Csor.00g029880 vs. NCBI nr
Match: TYK19488.1 (auxin-responsive protein SAUR32 [Cucumis melo var. makuwa]) HSP 1 Score: 209 bits (532), Expect = 1.10e-66 Identity = 113/151 (74.83%), Postives = 118/151 (78.15%), Query Frame = 0
BLAST of Csor.00g029880 vs. NCBI nr
Match: XP_008448892.1 (PREDICTED: auxin-responsive protein SAUR32 [Cucumis melo]) HSP 1 Score: 209 bits (532), Expect = 1.10e-66 Identity = 113/151 (74.83%), Postives = 118/151 (78.15%), Query Frame = 0
BLAST of Csor.00g029880 vs. ExPASy TrEMBL
Match: A0A6J1EBA0 (auxin-responsive protein SAUR32-like OS=Cucurbita moschata OX=3662 GN=LOC111431004 PE=3 SV=1) HSP 1 Score: 292 bits (747), Expect = 6.84e-100 Identity = 142/145 (97.93%), Postives = 142/145 (97.93%), Query Frame = 0
BLAST of Csor.00g029880 vs. ExPASy TrEMBL
Match: A0A5D3D7D7 (Auxin-responsive protein SAUR32 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold443G001430 PE=3 SV=1) HSP 1 Score: 209 bits (532), Expect = 5.30e-67 Identity = 113/151 (74.83%), Postives = 118/151 (78.15%), Query Frame = 0
BLAST of Csor.00g029880 vs. ExPASy TrEMBL
Match: A0A1S3BLN7 (auxin-responsive protein SAUR32 OS=Cucumis melo OX=3656 GN=LOC103490920 PE=3 SV=1) HSP 1 Score: 209 bits (532), Expect = 5.30e-67 Identity = 113/151 (74.83%), Postives = 118/151 (78.15%), Query Frame = 0
BLAST of Csor.00g029880 vs. ExPASy TrEMBL
Match: A0A0A0L5M2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G035310 PE=3 SV=1) HSP 1 Score: 203 bits (517), Expect = 1.02e-64 Identity = 110/152 (72.37%), Postives = 118/152 (77.63%), Query Frame = 0
BLAST of Csor.00g029880 vs. ExPASy TrEMBL
Match: A0A6J1KYV6 (auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111498817 PE=3 SV=1) HSP 1 Score: 194 bits (494), Expect = 2.42e-61 Identity = 102/145 (70.34%), Postives = 112/145 (77.24%), Query Frame = 0
BLAST of Csor.00g029880 vs. TAIR 10
Match: AT4G22620.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 99.4 bits (246), Expect = 2.6e-21 Identity = 61/157 (38.85%), Postives = 93/157 (59.24%), Query Frame = 0
BLAST of Csor.00g029880 vs. TAIR 10
Match: AT4G12410.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 93.6 bits (231), Expect = 1.4e-19 Identity = 57/154 (37.01%), Postives = 85/154 (55.19%), Query Frame = 0
BLAST of Csor.00g029880 vs. TAIR 10
Match: AT2G45210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 77.4 bits (189), Expect = 1.0e-14 Identity = 38/88 (43.18%), Postives = 57/88 (64.77%), Query Frame = 0
BLAST of Csor.00g029880 vs. TAIR 10
Match: AT3G60690.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13 Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of Csor.00g029880 vs. TAIR 10
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 73.6 bits (179), Expect = 1.5e-13 Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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