Csor.00g029260 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCTAATTCGTATCGTGGCGGTAGTTCCTTCTACAACGGCGATGCCGCTCCTTATCGTTCCAGGTATTGTTCTTTTTCTTCTACATGCTAAATTCCTAATTTATTTTCAGGAATTAAATGTTTTGTAAGAATTACGAGTTTGTATCATGTGTCTCGGAGAATCAGATCATTTCTATATTTACTGATGTTAAGAATCATAATTACTCAATTCATGTCGCTCAAGTGCAATCGTCCTTTGTTTTGAGGTATTCAGGGAGGGGCTTAGCACGAGACCGGCGGCTGCTTCCGATGAAATTCAACTACAGATCGATCCGATGCAAGGGGACTTGGACGACCAGATCGTTGGTCTCCATGGCCAGGTTAAAAGGCTGAGAAATGTAAGTATATGGTTTTCCATTAATCCATCGTACAGCTTTGCACTTAGATTTATTGATTTGCAACTGGAAACCGCAGCTAAACTTTTATATAGAGTTCGACATCTAAAAACAAGTTTTTGACAGAAATCTTCAGATTTCTTTCAACTTTTATAAAATATTTGAATCTAGCTTTGTTAGAGGTCAATCTATTTGTAATGATACTATAGGAATTACACCTCGTTCCTTTCTCAATTGAGCTCATGAGATGTACGTTATGGATTGATGCATTTCACATGGTATAGCTGTATGCTTTGTGCTCATATTTGTATTTCATTATAATGGCGGTCACAGGCATGGTTTTCTTTCTGTTTAGTTTCGTGATTTTCCCTCCTTTCTTATGTAAGATATGTGACTTTTTATTATTTAAGAAAACCGAAATATATAAGACATACAGCTGGAACAAGCAGAAGCCATACATTTACAGAGTCTTCGTTATGGCAGTTCTAGTCTATTGGCTCGTCATCGTTCTAAACGTATCATAGCCAATGAAAGAAGTGTGTAAGAATAATATAACAAGCATATCAATGTGAATTATAGTCGGTGGAGAAGAAACCTATTGGGCATCCTCTTTCCTTGGAGCACTTGATGGAAACCTTCCTTAGAGGTTCGCTAGCAATCCGAAGTTATAAAGTCGACATTTTTGAAGTCATAAGTTCAATCATTGGTCACTGTCTTCTTGTTTTACCCTTTCTAAAGTCTCCAAAATTGTCTGGCCATTGCCTTAAATATGGTCCTGTATAATGAACAAGAATCTACAAATTAAGGTGATAGAATTCCTTAGAACTAACTATTTGCCTATAGAAAGATATCTAGTTGGTGTGAGTAAATTCGAACTCTGGCACAGCTGATCAAAATGAAAAGAGGGGATTACTGATGTTATTGGTCTCTAACTGTGTGTTGTATGCCACCAAAATCTGGAAGACGAGCAGCATCTTTTCTTGACCTGGTCGTTTTCTTTTTTATTTATTTATTTATTTATTTTTGAGAAAGATTTGTTTCTAAACATTGAGCTAATCGTCCTATTGTTGACAACGTTTTTCTTTCATATTGTCTATAAAAGCTCTTCTTGTTTCTTATCTAGGAAAAAAGAACAGTTGTGTTTTTTTCTTTTTTTTTTCTGGTTCCAAAGTCAATATCCGGTTATCAGCTACTTAAATCAGACACGTTAATCTGAGAAAGTAACTTTATACTATGATCTGAGCAGCATTTTTCTGTTCAAAGTGCAAAGCTCCTAGCGTCTTCATTTTGCGACTCTTCACAGTTCTGTCATAATTTTACCTTATTGAGATCGTGTACATTTACTTAATTCCTAATCCAATTTTTTATCTTTTATTTTTGGTACTTGGTGTAATTGTTCTGGTGCAGATTGCTCAAGAAATTGGAACAGAAGCAAAATCCCAGCAAGATTTTCTAGATCAGTTGGTATGCAATTTTTTCCTAGTTGTCATATTTTCATTTGATTTTTTTTTTTTGTCATTATTATTATTATTTTTTTTTACTGATTGACGATCTTACTTGAGAGAAAAAAAAAAAAAAAAAATCTTCAGGTCCTGTTTGCTTAAGAAAATGGAAATTACAGATAATTGGAATAATAATTAGTCAACAGGAAAAACAATAGAATGAGAATTAAAATTTGAAAATTGCATCTATTAAATATTTTCTGTAACAAGGACCAGAATGTAAATGGTTATCGTTCCTTTCATTTATTAAATTTATCAAAGAATGTTTTCTCCCTTTGGGGGAAGGTAGCTTCTCTGAACTTCTTGTTTCCATCCATCAATGAAAAATTGTATCTTGTTATATGTATATATATGTGTATATATATATATATATAAAAGAAATGAGAAACGATCCCCATTTGTTATCGTCATACGAAAATTAGGATCATTCCAATTATTTGATTCCTGTTGTGGTAGGGAATGGAAATACATGTTGCGGCCTCATTTTGGATCCTCCTACCTTTTGCCAAAAAAAAACATAAAATGGATCAAAAAGAAAGAAACAAAACAAGTTTTCTTGATAACCTCAGCCTAAAATGCATAGAGCTCAATCAAATTAGAAGAAACTAACTGAAGAAAACCAGTCTCATATCATTTTCTACCAATTCGAAATGCATACAATCCCATATACTTCTCATACTTCCGACTGATTCAAAGTTCTGTTTTCTGTCTTGTTGTAGCAAATGACGTTGATCAAAGCTCAAGCGGGAGTGAAGAACAACGTAAGAAGATTGAACAAAAAAATCATACAGAACGGATCAAATCATGTCGTCCAGGTCGTCGTATTTGCATTGATCTGTTTCTTTATAGTGTATATGTGGTCGAAAATATCCCGAAAATGAATGCTTCCCTACCAGTTGCTGGCCAGTGACGAAGGAAAAGAAACAGGAATGA ATGGCGTCTAATTCGTATCGTGGCGGTAGTTCCTTCTACAACGGCGATGCCGCTCCTTATCGTTCCAGGGAGGGGCTTAGCACGAGACCGGCGGCTGCTTCCGATGAAATTCAACTACAGATCGATCCGATGCAAGGGGACTTGGACGACCAGATCGTTGGTCTCCATGGCCAGGTTAAAAGGCTGAGAAATATTGCTCAAGAAATTGGAACAGAAGCAAAATCCCAGCAAGATTTTCTAGATCAGTTGCAAATGACGTTGATCAAAGCTCAAGCGGGAGTGAAGAACAACTGTATATGTGGTCGAAAATATCCCGAAAATGAATGCTTCCCTACCAGTTGCTGGCCAGTGACGAAGGAAAAGAAACAGGAATGA ATGGCGTCTAATTCGTATCGTGGCGGTAGTTCCTTCTACAACGGCGATGCCGCTCCTTATCGTTCCAGGGAGGGGCTTAGCACGAGACCGGCGGCTGCTTCCGATGAAATTCAACTACAGATCGATCCGATGCAAGGGGACTTGGACGACCAGATCGTTGGTCTCCATGGCCAGGTTAAAAGGCTGAGAAATATTGCTCAAGAAATTGGAACAGAAGCAAAATCCCAGCAAGATTTTCTAGATCAGTTGCAAATGACGTTGATCAAAGCTCAAGCGGGAGTGAAGAACAACTGTATATGTGGTCGAAAATATCCCGAAAATGAATGCTTCCCTACCAGTTGCTGGCCAGTGACGAAGGAAAAGAAACAGGAATGA MASNSYRGGSSFYNGDAAPYRSREGLSTRPAAASDEIQLQIDPMQGDLDDQIVGLHGQVKRLRNIAQEIGTEAKSQQDFLDQLQMTLIKAQAGVKNNCICGRKYPENECFPTSCWPVTKEKKQE Homology
BLAST of Csor.00g029260 vs. ExPASy Swiss-Prot
Match: Q8VXX9 (Bet1-like protein At4g14600 OS=Arabidopsis thaliana OX=3702 GN=At4g14600 PE=2 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.2e-32 Identity = 74/99 (74.75%), Postives = 86/99 (86.87%), Query Frame = 0
BLAST of Csor.00g029260 vs. ExPASy Swiss-Prot
Match: Q8L9S0 (Bet1-like protein At1g29060 OS=Arabidopsis thaliana OX=3702 GN=At1g29060 PE=2 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 2.7e-32 Identity = 72/97 (74.23%), Postives = 85/97 (87.63%), Query Frame = 0
BLAST of Csor.00g029260 vs. NCBI nr
Match: KAG6608268.1 (Bet1-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 251 bits (640), Expect = 6.15e-84 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of Csor.00g029260 vs. NCBI nr
Match: XP_022940948.1 (bet1-like protein At1g29060 [Cucurbita moschata] >KAG7037611.1 Bet1-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 188 bits (477), Expect = 6.49e-59 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of Csor.00g029260 vs. NCBI nr
Match: XP_022980898.1 (bet1-like protein At1g29060 [Cucurbita maxima] >XP_023524421.1 bet1-like protein At1g29060 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 187 bits (474), Expect = 1.86e-58 Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of Csor.00g029260 vs. NCBI nr
Match: XP_008466185.1 (PREDICTED: bet1-like protein At1g29060 [Cucumis melo] >KAA0038681.1 bet1-like protein [Cucumis melo var. makuwa] >TYK31291.1 bet1-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 178 bits (452), Expect = 4.17e-55 Identity = 91/97 (93.81%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Csor.00g029260 vs. NCBI nr
Match: XP_004136265.1 (bet1-like protein At1g29060 [Cucumis sativus]) HSP 1 Score: 174 bits (440), Expect = 2.80e-53 Identity = 89/97 (91.75%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of Csor.00g029260 vs. ExPASy TrEMBL
Match: A0A6J1FQQ6 (bet1-like protein At1g29060 OS=Cucurbita moschata OX=3662 GN=LOC111446380 PE=4 SV=1) HSP 1 Score: 188 bits (477), Expect = 3.14e-59 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of Csor.00g029260 vs. ExPASy TrEMBL
Match: A0A6J1J0M1 (bet1-like protein At1g29060 OS=Cucurbita maxima OX=3661 GN=LOC111480213 PE=4 SV=1) HSP 1 Score: 187 bits (474), Expect = 9.00e-59 Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of Csor.00g029260 vs. ExPASy TrEMBL
Match: A0A5A7TAQ3 (Bet1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005890 PE=4 SV=1) HSP 1 Score: 178 bits (452), Expect = 2.02e-55 Identity = 91/97 (93.81%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Csor.00g029260 vs. ExPASy TrEMBL
Match: A0A1S3CQM7 (bet1-like protein At1g29060 OS=Cucumis melo OX=3656 GN=LOC103503676 PE=4 SV=1) HSP 1 Score: 178 bits (452), Expect = 2.02e-55 Identity = 91/97 (93.81%), Postives = 96/97 (98.97%), Query Frame = 0
BLAST of Csor.00g029260 vs. ExPASy TrEMBL
Match: A0A0A0LHL4 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G889980 PE=4 SV=1) HSP 1 Score: 174 bits (440), Expect = 1.36e-53 Identity = 89/97 (91.75%), Postives = 95/97 (97.94%), Query Frame = 0
BLAST of Csor.00g029260 vs. TAIR 10
Match: AT4G14600.1 (Target SNARE coiled-coil domain protein ) HSP 1 Score: 140.6 bits (353), Expect = 8.6e-34 Identity = 74/99 (74.75%), Postives = 86/99 (86.87%), Query Frame = 0
BLAST of Csor.00g029260 vs. TAIR 10
Match: AT1G29060.1 (Target SNARE coiled-coil domain protein ) HSP 1 Score: 139.4 bits (350), Expect = 1.9e-33 Identity = 72/97 (74.23%), Postives = 85/97 (87.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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