Csor.00g028550 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g028550
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RING-type E3 ubiquitin transferase
Location	Csor_Chr20: 4386714 .. 4387955 (+)
RNA-Seq Expression	Csor.00g028550
Synteny	Csor.00g028550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACCGCCCCTTCCCCATCTCCATCTCCTTCTCCTTCTCCTTCTCCTTCCACCTCCTCCTCCACTGCCGCCCCCGTCAATTTCCCTTCCCCCTCATCCTTACTGCCGGGAAAGCTCCCAGTCGACTTCAGCCCTCCTCTAATCGCAATGGTTGTCGTCATCGCTACCGCCTTTCTCATCGTCACTTACTCTCGCCTCATCTCCCGCCACGTCATCCCTCCAATCCTCCTCCTAATCCGCCGCCACCGCCGCCGCTGGCGGCGGTGGCGGCGGAGACGACGGCGCGCCCGATCTTACCTCCCGTCCTCCTCCGGCGGCGACTTGGATTCGCTCCCTTACGATTCGCCTTTCTTCGAGCATACGGATGGCTTCCACGTGTTCTCCCCGTACGGCCTCGACGAATCCATCATCAAGACGATTCCACTCTCCGTCTATACTGCCAAGAGCCGCCGTGACAGCCGTGACCGTGAGTGCGCCGTTTGTCTTCTGGAGTTTGAAGACGACGATTACGTCCGAACGCTTCCGATTTGTTCTCACGCATTTCACGTTGATTGTATAGACGTATGGCTTAGATCACACGCGAACTGTCCTCTCTGTCGCGCGGTGGTTTTCAGGCCAGAATCTCCGTTCACGCCGGTTATGGCAGCAAGAATCCGGCCAAGCCTCGACGAAACGATCTTACAGAGCATCGTATTAGAGCCGCTAGCGGAAGGTCCTATTCCTAATCGAGATTCTTATCACGCAACAGAATCGGAAATCACGCCTTGCGTTGATGAACCAAGGAACAGTAATTCGTTAGAGGATCAAATGAACGGGCGAGATTTCTTACTGAAACGATCGTATTCATTCGGATTCGAACGAAGCTTGGCGTCAGAGAGAATGATTCTGGAACCAGCAACCGCATCGCCATGGAGGTACCGCCGTGGAAGCTTCTGGAGCAAACGGCCATCACCGTTCGGATCTCTACCGAAGGCGAGAGTGTTCTCATTCCGATACTACAGAGGAATGAAATCGCCGTTCTTCAGACGACGAGGAGGATTCTTTCCGCTATCGGAATCAAGCTGGAGATTCTCCAACGGCGTAGGCGGAGGTTCATCGAGACGAAGCAAGTCGATGACAAGTCCAATGTTTCTCCGATCGTCGGTAACCAGCGGAGGAGCAGCAACGTTCTCATCGAGCCGATTGAGATGCGGAGATCCCGAGGCATTACTATCACCGGAGAGATTCAACCGAAGATGA

mRNA sequence

ATGTCGACCGCCCCTTCCCCATCTCCATCTCCTTCTCCTTCTCCTTCTCCTTCCACCTCCTCCTCCACTGCCGCCCCCGTCAATTTCCCTTCCCCCTCATCCTTACTGCCGGGAAAGCTCCCAGTCGACTTCAGCCCTCCTCTAATCGCAATGGTTGTCGTCATCGCTACCGCCTTTCTCATCGTCACTTACTCTCGCCTCATCTCCCGCCACGTCATCCCTCCAATCCTCCTCCTAATCCGCCGCCACCGCCGCCGCTGGCGGCGGTGGCGGCGGAGACGACGGCGCGCCCGATCTTACCTCCCGTCCTCCTCCGGCGGCGACTTGGATTCGCTCCCTTACGATTCGCCTTTCTTCGAGCATACGGATGGCTTCCACGTGTTCTCCCCGTACGGCCTCGACGAATCCATCATCAAGACGATTCCACTCTCCGTCTATACTGCCAAGAGCCGCCGTGACAGCCGTGACCGTGAGTGCGCCGTTTGTCTTCTGGAGTTTGAAGACGACGATTACGTCCGAACGCTTCCGATTTGTTCTCACGCATTTCACGTTGATTGTATAGACGTATGGCTTAGATCACACGCGAACTGTCCTCTCTGTCGCGCGGTGGTTTTCAGGCCAGAATCTCCGTTCACGCCGGTTATGGCAGCAAGAATCCGGCCAAGCCTCGACGAAACGATCTTACAGAGCATCGTATTAGAGCCGCTAGCGGAAGGTCCTATTCCTAATCGAGATTCTTATCACGCAACAGAATCGGAAATCACGCCTTGCGTTGATGAACCAAGGAACAGTAATTCGTTAGAGGATCAAATGAACGGGCGAGATTTCTTACTGAAACGATCGTATTCATTCGGATTCGAACGAAGCTTGGCGTCAGAGAGAATGATTCTGGAACCAGCAACCGCATCGCCATGGAGGTACCGCCGTGGAAGCTTCTGGAGCAAACGGCCATCACCGTTCGGATCTCTACCGAAGGCGAGAGTGTTCTCATTCCGATACTACAGAGGAATGAAATCGCCGTTCTTCAGACGACGAGGAGGATTCTTTCCGCTATCGGAATCAAGCTGGAGATTCTCCAACGGCGTAGGCGGAGGTTCATCGAGACGAAGCAAGTCGATGACAAGTCCAATGTTTCTCCGATCGTCGGTAACCAGCGGAGGAGCAGCAACGTTCTCATCGAGCCGATTGAGATGCGGAGATCCCGAGGCATTACTATCACCGGAGAGATTCAACCGAAGATGA

Coding sequence (CDS)

ATGTCGACCGCCCCTTCCCCATCTCCATCTCCTTCTCCTTCTCCTTCTCCTTCCACCTCCTCCTCCACTGCCGCCCCCGTCAATTTCCCTTCCCCCTCATCCTTACTGCCGGGAAAGCTCCCAGTCGACTTCAGCCCTCCTCTAATCGCAATGGTTGTCGTCATCGCTACCGCCTTTCTCATCGTCACTTACTCTCGCCTCATCTCCCGCCACGTCATCCCTCCAATCCTCCTCCTAATCCGCCGCCACCGCCGCCGCTGGCGGCGGTGGCGGCGGAGACGACGGCGCGCCCGATCTTACCTCCCGTCCTCCTCCGGCGGCGACTTGGATTCGCTCCCTTACGATTCGCCTTTCTTCGAGCATACGGATGGCTTCCACGTGTTCTCCCCGTACGGCCTCGACGAATCCATCATCAAGACGATTCCACTCTCCGTCTATACTGCCAAGAGCCGCCGTGACAGCCGTGACCGTGAGTGCGCCGTTTGTCTTCTGGAGTTTGAAGACGACGATTACGTCCGAACGCTTCCGATTTGTTCTCACGCATTTCACGTTGATTGTATAGACGTATGGCTTAGATCACACGCGAACTGTCCTCTCTGTCGCGCGGTGGTTTTCAGGCCAGAATCTCCGTTCACGCCGGTTATGGCAGCAAGAATCCGGCCAAGCCTCGACGAAACGATCTTACAGAGCATCGTATTAGAGCCGCTAGCGGAAGGTCCTATTCCTAATCGAGATTCTTATCACGCAACAGAATCGGAAATCACGCCTTGCGTTGATGAACCAAGGAACAGTAATTCGTTAGAGGATCAAATGAACGGGCGAGATTTCTTACTGAAACGATCGTATTCATTCGGATTCGAACGAAGCTTGGCGTCAGAGAGAATGATTCTGGAACCAGCAACCGCATCGCCATGGAGGTACCGCCGTGGAAGCTTCTGGAGCAAACGGCCATCACCGTTCGGATCTCTACCGAAGGCGAGAGTGTTCTCATTCCGATACTACAGAGGAATGAAATCGCCGTTCTTCAGACGACGAGGAGGATTCTTTCCGCTATCGGAATCAAGCTGGAGATTCTCCAACGGCGTAGGCGGAGGTTCATCGAGACGAAGCAAGTCGATGACAAGTCCAATGTTTCTCCGATCGTCGGTAACCAGCGGAGGAGCAGCAACGTTCTCATCGAGCCGATTGAGATGCGGAGATCCCGAGGCATTACTATCACCGGAGAGATTCAACCGAAGATGA

Protein sequence

MSTAPSPSPSPSPSPSPSTSSSTAAPVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGPIPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR

Homology

[Close]

BLAST of Csor.00g028550 vs. ExPASy Swiss-Prot
Match: Q67YI6 (RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2)

HSP 1 Score: 324.3 bits (830), Expect = 2.0e-87
Identity = 226/440 (51.36%), Postives = 275/440 (62.50%), Query Frame = 0


Query: 4   APSP-SPSPSPSPSPSTSSSTAAPVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFLIV 63
           AP P S   SPSPSPS+  S         P        P++FSPPLIAMVVV+A AFL V
Sbjct: 5   APPPRSGDNSPSPSPSSGISEEILSRSSDP--------PLEFSPPLIAMVVVLAAAFLFV 64

Query: 64  TYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRR----ARSYLPSSSGGDLDSLPYDSPF 123
           TYSRLISR  + P+        RR+RRWR RRRR    + +   S+S  DL S    SPF
Sbjct: 65  TYSRLISRRFLSPLF-------RRFRRWRCRRRRLLHLSSASSASTSSSDLRSF---SPF 124

Query: 124 FEHTDGFHV--FSPYGLDESIIKTIPLSVYTAKS---------RRDSRDRECAVCLLEFE 183
               D FH   +SPYGLD+S+IKT+PL +Y+A +            +  R+CAVCLLEFE
Sbjct: 125 --PFDSFHYSSYSPYGLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFE 184

Query: 184 DDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCR------AVVFRPESPFTPVMAARIRP 243
           + DYVRTLP+C HAFH++CID WLRSH NCPLCR      A V  P SPF P+MA RIRP
Sbjct: 185 EGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRP 244

Query: 244 SLDETILQSIVLEPLAEGPI-PNRDSYHATESEITPCVDEPRNSNSLEDQMN---GRDFL 303
           SLD+    +I++     G I P+R +++   ++ T   ++     S+E+Q +    R   
Sbjct: 245 SLDDEENNAIII----RGEITPSRSNWNTIAADTT---NDQEIRASVEEQSSPAISRFRE 304

Query: 304 LKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSL-PKARVFSFRYYRG 363
           LKRSYSF  ER   SER+ +EPAT SPWRYRR S W+KR SPFG+L  K+RVFSFRYYR 
Sbjct: 305 LKRSYSFECERESESERVTMEPATVSPWRYRR-STWNKRQSPFGNLISKSRVFSFRYYRS 364

Query: 364 MKSPFFRRR---GGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSS 414
            KSPFFRRR   G F+P+SE          G SSRR+KSMTSPMF R+       A  SS
Sbjct: 365 TKSPFFRRRSSAGVFYPISERI-----PATGSSSRRTKSMTSPMFFRT-------APHSS 404

[Close]

BLAST of Csor.00g028550 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 3.0e-19
Identity = 62/171 (36.26%), Postives = 92/171 (53.80%), Query Frame = 0


Query: 43  DFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLP 102
           DFSP LIA++ ++A+AF++V+Y  LIS++                      RRR  S   
Sbjct: 55  DFSPLLIALIGILASAFILVSYYTLISKYC--------------------HRRRHNSSST 114

Query: 103 SSSGGDLDSLPYDSPFFEHTDGFHVFSPY---------GLDESIIKTIPLSVYTAKSRRD 162
           S++  +  S  Y      + +     +P          GLDES+IK+I +  Y  K    
Sbjct: 115 SAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKY-RKMDGF 174

Query: 163 SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVV 205
               +C+VCL EF++++ +R LP C+HAFHV CID WL+SH+NCPLCRA +
Sbjct: 175 VESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFI 204

[Close]

BLAST of Csor.00g028550 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 88.2 bits (217), Expect = 2.4e-16
Identity = 61/161 (37.89%), Postives = 85/161 (52.80%), Query Frame = 0


Query: 44  FSPPLIAMVVVIATAFLIVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPS 103
           FSP +IA++ V+A+AFL+V+Y   IS++      L            R R   + S   +
Sbjct: 55  FSPLVIAIIGVLASAFLLVSYYTFISKYCGTVSSL------------RGRVFGSSSGGAA 114

Query: 104 SSGGDLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDS--RDRECAV 163
             GG      +        + ++V  P GLDE++I  I +  Y    R D      +C+V
Sbjct: 115 YGGGAGSGGRHGHGQSRSHESWNVSPPSGLDETLINKITVCKY---RRGDGFVHTTDCSV 174

Query: 164 CLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRA 203
           CL EF D + +R LP CSHAFH  CID WL+SH+NCPLCRA
Sbjct: 175 CLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRA 200

[Close]

BLAST of Csor.00g028550 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 87.8 bits (216), Expect = 3.1e-16
Identity = 74/260 (28.46%), Postives = 123/260 (47.31%), Query Frame = 0


Query: 48  LIAMVVVIATAFLIVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGG 107
           +++ +V++    +++ +  L +R        L+R  RR  RR  R RR    +  +    
Sbjct: 31  MLSAIVILFFVVILMVFLHLYAR------WYLLRARRRHLRRRSRNRRATMVFFTADPS- 90

Query: 108 DLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFE 167
                         T    V +  GLD ++IK++P+  ++ ++ +D    ECAVCL EFE
Sbjct: 91  --------------TAATSVVASRGLDPNVIKSLPVFTFSDETHKD--PIECAVCLSEFE 150

Query: 168 DDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRP---SLD 227
           + +  R LP C H FHVDCID+W  SH+ CPLCR++V    +      AAR R    ++D
Sbjct: 151 ESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLV-ESLAGIESTAAAREREVVIAVD 210

Query: 228 ETILQSIVLEP-----LAEGPIPNRDSYHATE--SEITPCVDEPRNS-NSLEDQMNGRDF 287
              +  +V+EP     L + P  +  S    E        ++ PR + +  ED++  RD 
Sbjct: 211 SDPV--LVIEPSSSSGLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDS 264

Query: 288 LLKRSYSFGFERSLASERMI 297
              +S+     R L+  RM+
Sbjct: 271 PASQSFRSPMSRMLSFTRML 264

[Close]

BLAST of Csor.00g028550 vs. ExPASy Swiss-Prot
Match: Q9LUZ9 (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.2e-15
Identity = 60/160 (37.50%), Postives = 76/160 (47.50%), Query Frame = 0


Query: 48  LIAMVVVIATAFLIVTYSRLISRHVIPPI---LLLIRRHRRRWRRWRRRRRRARSYLPSS 107
           L+A +V +    L V      +R    P         RHRRR RR RRR       +PS 
Sbjct: 30  LLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRRRRNRRRTVTTTRIIPSL 89

Query: 108 SGGDLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLL 167
             G  D     SP    T         GLD S+I +IPL VY      +  + EC +CL 
Sbjct: 90  PLGGFDD-GVSSPAATATR-----DDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLG 149

Query: 168 EFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVV 205
            +E  D+ R L  C H FHV+CID+WL SH+ CPLCR+ V
Sbjct: 150 LWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPV 183

[Close]

BLAST of Csor.00g028550 vs. NCBI nr
Match: KAG6571140.1 (RING-H2 finger protein ATL65, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 811 bits (2094), Expect = 6.07e-296
Identity = 413/413 (100.00%), Postives = 413/413 (100.00%), Query Frame = 0


Query: 1   MSTAPSPSPSPSPSPSPSTSSSTAAPVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFL 60
           MSTAPSPSPSPSPSPSPSTSSSTAAPVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFL
Sbjct: 1   MSTAPSPSPSPSPSPSPSTSSSTAAPVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFL 60

Query: 61  IVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE 120
           IVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE
Sbjct: 61  IVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE 120

Query: 121 HTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSH 180
           HTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSH
Sbjct: 121 HTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSH 180

Query: 181 AFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGP 240
           AFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGP
Sbjct: 181 AFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGP 240

Query: 241 IPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPA 300
           IPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPA
Sbjct: 241 IPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPA 300

Query: 301 TASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSN 360
           TASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSN
Sbjct: 301 TASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSN 360

Query: 361 GVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413
           GVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR
Sbjct: 361 GVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413

[Close]

BLAST of Csor.00g028550 vs. NCBI nr
Match: XP_022943929.1 (RING-H2 finger protein ATL65 [Cucurbita moschata] >KAG7010952.1 RING-H2 finger protein ATL65, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 806 bits (2081), Expect = 5.81e-294
Identity = 411/413 (99.52%), Postives = 411/413 (99.52%), Query Frame = 0


Query: 1   MSTAPSPSPSPSPSPSPSTSSSTAAPVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFL 60
           MSTAPSPSPSPSPSPSPSTSSS AA VNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFL
Sbjct: 1   MSTAPSPSPSPSPSPSPSTSSSAAAAVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFL 60

Query: 61  IVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE 120
           IVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE
Sbjct: 61  IVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE 120

Query: 121 HTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSH 180
           HTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSH
Sbjct: 121 HTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSH 180

Query: 181 AFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGP 240
           AFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGP
Sbjct: 181 AFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGP 240

Query: 241 IPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPA 300
           IPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPA
Sbjct: 241 IPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPA 300

Query: 301 TASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSN 360
           TASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSN
Sbjct: 301 TASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSN 360

Query: 361 GVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413
           GVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR
Sbjct: 361 GVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413

[Close]

BLAST of Csor.00g028550 vs. NCBI nr
Match: XP_023511773.1 (RING-H2 finger protein ATL65 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 794 bits (2051), Expect = 2.26e-289
Identity = 407/414 (98.31%), Postives = 410/414 (99.03%), Query Frame = 0


Query: 1   MSTAPSPSPSPSPSPSPSTSSST-AAPVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAF 60
           MSTAPSPSPS SPSPSPSTSSS+ AA VNFP PSSLLPGKLPVDFSPPLIAMVVVIATAF
Sbjct: 1   MSTAPSPSPSSSPSPSPSTSSSSYAAAVNFPPPSSLLPGKLPVDFSPPLIAMVVVIATAF 60

Query: 61  LIVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFF 120
           LIVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFF
Sbjct: 61  LIVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFF 120

Query: 121 EHTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICS 180
           EHTDG+HVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICS
Sbjct: 121 EHTDGYHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICS 180

Query: 181 HAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEG 240
           HAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLD+TILQSIVLEPLAEG
Sbjct: 181 HAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILQSIVLEPLAEG 240

Query: 241 PIPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEP 300
           PIPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEP
Sbjct: 241 PIPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEP 300

Query: 301 ATASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFS 360
           ATASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFS
Sbjct: 301 ATASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFS 360

Query: 361 NGVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413
           NGVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR
Sbjct: 361 NGVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 414

[Close]

BLAST of Csor.00g028550 vs. NCBI nr
Match: XP_022986546.1 (RING-H2 finger protein ATL65 [Cucurbita maxima])

HSP 1 Score: 789 bits (2038), Expect = 2.08e-287
Identity = 404/413 (97.82%), Postives = 408/413 (98.79%), Query Frame = 0


Query: 1   MSTAPSPSPSPSPSPSPSTSSSTAAPVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFL 60
           MSTAPSPSPSPSPSPS S+SSS+AA VNFP PSSLLP KLPVDFSPPLIAMVVVIATAFL
Sbjct: 1   MSTAPSPSPSPSPSPSTSSSSSSAAAVNFPPPSSLLPAKLPVDFSPPLIAMVVVIATAFL 60

Query: 61  IVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE 120
           IVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE
Sbjct: 61  IVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE 120

Query: 121 HTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSH 180
           HTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSH
Sbjct: 121 HTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSH 180

Query: 181 AFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGP 240
           AFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLD+TILQSIVLEPLAEGP
Sbjct: 181 AFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILQSIVLEPLAEGP 240

Query: 241 IPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPA 300
           IPNRDSY+ATESEITP VDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPA
Sbjct: 241 IPNRDSYNATESEITPYVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPA 300

Query: 301 TASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSN 360
           TASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSN
Sbjct: 301 TASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSN 360

Query: 361 GVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413
           GVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR
Sbjct: 361 GVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413

[Close]

BLAST of Csor.00g028550 vs. NCBI nr
Match: XP_038902895.1 (RING-H2 finger protein ATL65 [Benincasa hispida])

HSP 1 Score: 737 bits (1902), Expect = 7.29e-267
Identity = 376/405 (92.84%), Postives = 386/405 (95.31%), Query Frame = 0


Query: 9   PSPSPSPSPSTSSSTAAPVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLI 68
           PSPSPSPSPST++S A   NFP PSSL P KLPVDFSPPLIAMVVVIATAFLIVTYSRLI
Sbjct: 5   PSPSPSPSPSTAASAA---NFPPPSSLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLI 64

Query: 69  SRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEHTDGFHVF 128
           SRH+IPPIL L+R HRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE TDGFHVF
Sbjct: 65  SRHLIPPILHLLRLHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEPTDGFHVF 124

Query: 129 SPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCID 188
           SPYGLDES+IKTIPLSVYTAKSR    DRECAVCLLEFEDDDYVRTLPICSHAFHVDCID
Sbjct: 125 SPYGLDESVIKTIPLSVYTAKSR----DRECAVCLLEFEDDDYVRTLPICSHAFHVDCID 184

Query: 189 VWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGPIPNRDSYH 248
           VWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLD+TIL+SIVLEPL EG IPNRDSYH
Sbjct: 185 VWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLVEGTIPNRDSYH 244

Query: 249 ATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPATASPWRYR 308
           ATESEITPCVDEPRNSNS++DQ+NGRDFLLKRSYSFGFERSLASERMILEPAT SPWRYR
Sbjct: 245 ATESEITPCVDEPRNSNSVDDQINGRDFLLKRSYSFGFERSLASERMILEPATTSPWRYR 304

Query: 309 RGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSR 368
           RGSFW KRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSR
Sbjct: 305 RGSFWMKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSR 364

Query: 369 RSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413
           RSKSMTSPMFLRSSVT GGAATFSSSRLRCGDPEALLSPERFNRR
Sbjct: 365 RSKSMTSPMFLRSSVTGGGAATFSSSRLRCGDPEALLSPERFNRR 402

[Close]

BLAST of Csor.00g028550 vs. ExPASy TrEMBL
Match: A0A6J1FVL7 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111448502 PE=3 SV=1)

HSP 1 Score: 806 bits (2081), Expect = 2.81e-294
Identity = 411/413 (99.52%), Postives = 411/413 (99.52%), Query Frame = 0


Query: 1   MSTAPSPSPSPSPSPSPSTSSSTAAPVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFL 60
           MSTAPSPSPSPSPSPSPSTSSS AA VNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFL
Sbjct: 1   MSTAPSPSPSPSPSPSPSTSSSAAAAVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFL 60

Query: 61  IVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE 120
           IVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE
Sbjct: 61  IVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE 120

Query: 121 HTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSH 180
           HTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSH
Sbjct: 121 HTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSH 180

Query: 181 AFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGP 240
           AFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGP
Sbjct: 181 AFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGP 240

Query: 241 IPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPA 300
           IPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPA
Sbjct: 241 IPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPA 300

Query: 301 TASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSN 360
           TASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSN
Sbjct: 301 TASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSN 360

Query: 361 GVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413
           GVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR
Sbjct: 361 GVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413

[Close]

BLAST of Csor.00g028550 vs. ExPASy TrEMBL
Match: A0A6J1JBG1 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111484253 PE=3 SV=1)

HSP 1 Score: 789 bits (2038), Expect = 1.01e-287
Identity = 404/413 (97.82%), Postives = 408/413 (98.79%), Query Frame = 0


Query: 1   MSTAPSPSPSPSPSPSPSTSSSTAAPVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFL 60
           MSTAPSPSPSPSPSPS S+SSS+AA VNFP PSSLLP KLPVDFSPPLIAMVVVIATAFL
Sbjct: 1   MSTAPSPSPSPSPSPSTSSSSSSAAAVNFPPPSSLLPAKLPVDFSPPLIAMVVVIATAFL 60

Query: 61  IVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE 120
           IVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE
Sbjct: 61  IVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFE 120

Query: 121 HTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSH 180
           HTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSH
Sbjct: 121 HTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSH 180

Query: 181 AFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGP 240
           AFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLD+TILQSIVLEPLAEGP
Sbjct: 181 AFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILQSIVLEPLAEGP 240

Query: 241 IPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPA 300
           IPNRDSY+ATESEITP VDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPA
Sbjct: 241 IPNRDSYNATESEITPYVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPA 300

Query: 301 TASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSN 360
           TASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSN
Sbjct: 301 TASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSN 360

Query: 361 GVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413
           GVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR
Sbjct: 361 GVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 413

[Close]

BLAST of Csor.00g028550 vs. ExPASy TrEMBL
Match: A0A0A0LIL3 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G238760 PE=3 SV=1)

HSP 1 Score: 731 bits (1886), Expect = 1.70e-264
Identity = 384/421 (91.21%), Postives = 395/421 (93.82%), Query Frame = 0


Query: 1   MSTAPSPSPSPSPSPSPSTSSST----AAPVNFPSPSSLLPGKLPVDFSPPLIAMVVVIA 60
           M T+PSPSPSPSPSPSPSTSSS+    AA  NFP PSSL P KLPVDFSPPLIAMVVVIA
Sbjct: 1   MPTSPSPSPSPSPSPSPSTSSSSSSSSAAAANFPPPSSLQPAKLPVDFSPPLIAMVVVIA 60

Query: 61  TAFLIVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRR-RARSYLPSSSGGDLDSLPYD 120
           TAFLIVTYSRLISRH+IPPIL L+R HRRRWRRWRRRRR  ARSY+PSSSGGDLDSLPYD
Sbjct: 61  TAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRLAARSYIPSSSGGDLDSLPYD 120

Query: 121 SPFFEHT-DGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRT 180
           SPFFE T D FHVFSPYGLDES+IKTIPLSVYTAKSR    DRECAVCLLEFEDDDYVRT
Sbjct: 121 SPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSR----DRECAVCLLEFEDDDYVRT 180

Query: 181 LPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLE 240
           LPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLD+TIL+SI+LE
Sbjct: 181 LPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIILE 240

Query: 241 PLAEGP-IPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASE 300
           PLAEGP IPNRDSYHATESEITPC+DEPRNSNS+EDQMNGRDFLLKRSYSFGFERSLASE
Sbjct: 241 PLAEGPPIPNRDSYHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASE 300

Query: 301 RMILEPATASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSE 360
           RMILEPAT SPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSE
Sbjct: 301 RMILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSE 360

Query: 361 SSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTSGG-AATFSSSRLRCGDPEALLSPERFNR 413
           SSWRFSNGVGGGSSRRSKSMTSPMFLRSSVT GG AA FSSSRLRCGDPEALLSPERFNR
Sbjct: 361 SSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGAAAFSSSRLRCGDPEALLSPERFNR 417

[Close]

BLAST of Csor.00g028550 vs. ExPASy TrEMBL
Match: A0A1S4E2C5 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103498427 PE=3 SV=1)

HSP 1 Score: 716 bits (1847), Expect = 1.10e-258
Identity = 373/410 (90.98%), Postives = 383/410 (93.41%), Query Frame = 0


Query: 10  SPSPSPSPSTSSSTAAPVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLIS 69
           SPSPSPS S S+S AA  NFP PSSL   KLPVDFSPPLIAMVVVIATAFLIVTYSRLIS
Sbjct: 4   SPSPSPSLSPSTSAAAAANFPPPSSLQSAKLPVDFSPPLIAMVVVIATAFLIVTYSRLIS 63

Query: 70  RHVIPPILLLIRRHRRRWRRWRRRRRRA-RSYLPSSSGGDLDSLPYDSPFFEHT-DGFHV 129
           RH++PPIL L+R HRRRWRRWRRRRRRA RSY+PSSSGGDLDSLPYDSPFFE T D FHV
Sbjct: 64  RHLVPPILHLLRLHRRRWRRWRRRRRRAARSYIPSSSGGDLDSLPYDSPFFEPTTDAFHV 123

Query: 130 FSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCI 189
           FSPYGLDES+IKTIPLSVYTAKSR    DRECAVCLLEFEDDDYVRTLPICSHAFHVDCI
Sbjct: 124 FSPYGLDESVIKTIPLSVYTAKSR----DRECAVCLLEFEDDDYVRTLPICSHAFHVDCI 183

Query: 190 DVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGP-IPNRDS 249
           DVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLD+TIL+SIVLEPLAEGP IPNRDS
Sbjct: 184 DVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTILRSIVLEPLAEGPLIPNRDS 243

Query: 250 YHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPATASPWR 309
           YHATESEITPC+DEPRNSNS+EDQMNGRDFLLKRSYSFGFERSLASERMILEPAT SPWR
Sbjct: 244 YHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFERSLASERMILEPATTSPWR 303

Query: 310 YRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGS 369
           YRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGS
Sbjct: 304 YRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGS 363

Query: 370 SRRSKSMTSPMFLRSSVTSGGA---ATFSSSRLRCGDPEALLSPERFNRR 413
           SRRSKSMTSPMFLRSSVT GG    A FSSSRLRCGDPEALLSPERFNRR
Sbjct: 364 SRRSKSMTSPMFLRSSVTGGGGGGGAAFSSSRLRCGDPEALLSPERFNRR 409

[Close]

BLAST of Csor.00g028550 vs. ExPASy TrEMBL
Match: A0A5A7TSC8 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005120 PE=3 SV=1)

HSP 1 Score: 670 bits (1729), Expect = 1.93e-241
Identity = 343/368 (93.21%), Postives = 351/368 (95.38%), Query Frame = 0


Query: 51  MVVVIATAFLIVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRA-RSYLPSSSGGDL 110
           MVVVIATAFLIVTYSRLISRH+IPPIL L+R HRRRWRRWRRRRRRA RSY+PSSSGGDL
Sbjct: 1   MVVVIATAFLIVTYSRLISRHLIPPILHLLRLHRRRWRRWRRRRRRAARSYIPSSSGGDL 60

Query: 111 DSLPYDSPFFEHT-DGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFED 170
           DSLPYDSPFFE T D FHVFSPYGLDES+IKTIPLSVYTAKSR    DRECAVCLLEFED
Sbjct: 61  DSLPYDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAKSR----DRECAVCLLEFED 120

Query: 171 DDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETIL 230
           DDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLD+TIL
Sbjct: 121 DDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDDTIL 180

Query: 231 QSIVLEPLAEGP-IPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFE 290
           +SIVLEPLAEGP IPNRDSYHATESEITPC+DEPRNSNS+EDQMNGRDFLLKRSYSFGFE
Sbjct: 181 RSIVLEPLAEGPLIPNRDSYHATESEITPCIDEPRNSNSVEDQMNGRDFLLKRSYSFGFE 240

Query: 291 RSLASERMILEPATASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGG 350
           RSLASERMILEPAT SPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGG
Sbjct: 241 RSLASERMILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGG 300

Query: 351 FFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTSGGA--ATFSSSRLRCGDPEALL 410
           FFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVT GG   A FSSSRLRCGDPEALL
Sbjct: 301 FFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTGGGGGGAAFSSSRLRCGDPEALL 360

Query: 411 SPERFNRR 413
           SPERFNRR
Sbjct: 361 SPERFNRR 364

[Close]

BLAST of Csor.00g028550 vs. TAIR 10
Match: AT3G18930.1 (RING/U-box superfamily protein )

HSP 1 Score: 324.3 bits (830), Expect = 1.4e-88
Identity = 226/440 (51.36%), Postives = 275/440 (62.50%), Query Frame = 0


Query: 4   APSP-SPSPSPSPSPSTSSSTAAPVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFLIV 63
           AP P S   SPSPSPS+  S         P        P++FSPPLIAMVVV+A AFL V
Sbjct: 5   APPPRSGDNSPSPSPSSGISEEILSRSSDP--------PLEFSPPLIAMVVVLAAAFLFV 64

Query: 64  TYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRR----ARSYLPSSSGGDLDSLPYDSPF 123
           TYSRLISR  + P+        RR+RRWR RRRR    + +   S+S  DL S    SPF
Sbjct: 65  TYSRLISRRFLSPLF-------RRFRRWRCRRRRLLHLSSASSASTSSSDLRSF---SPF 124

Query: 124 FEHTDGFHV--FSPYGLDESIIKTIPLSVYTAKS---------RRDSRDRECAVCLLEFE 183
               D FH   +SPYGLD+S+IKT+PL +Y+A +            +  R+CAVCLLEFE
Sbjct: 125 --PFDSFHYSSYSPYGLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFE 184

Query: 184 DDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCR------AVVFRPESPFTPVMAARIRP 243
           + DYVRTLP+C HAFH++CID WLRSH NCPLCR      A V  P SPF P+MA RIRP
Sbjct: 185 EGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRP 244

Query: 244 SLDETILQSIVLEPLAEGPI-PNRDSYHATESEITPCVDEPRNSNSLEDQMN---GRDFL 303
           SLD+    +I++     G I P+R +++   ++ T   ++     S+E+Q +    R   
Sbjct: 245 SLDDEENNAIII----RGEITPSRSNWNTIAADTT---NDQEIRASVEEQSSPAISRFRE 304

Query: 304 LKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSL-PKARVFSFRYYRG 363
           LKRSYSF  ER   SER+ +EPAT SPWRYRR S W+KR SPFG+L  K+RVFSFRYYR 
Sbjct: 305 LKRSYSFECERESESERVTMEPATVSPWRYRR-STWNKRQSPFGNLISKSRVFSFRYYRS 364

Query: 364 MKSPFFRRR---GGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSS 414
            KSPFFRRR   G F+P+SE          G SSRR+KSMTSPMF R+       A  SS
Sbjct: 365 TKSPFFRRRSSAGVFYPISERI-----PATGSSSRRTKSMTSPMFFRT-------APHSS 404

[Close]

BLAST of Csor.00g028550 vs. TAIR 10
Match: AT3G18930.2 (RING/U-box superfamily protein )

HSP 1 Score: 324.3 bits (830), Expect = 1.4e-88
Identity = 226/440 (51.36%), Postives = 275/440 (62.50%), Query Frame = 0


Query: 4   APSP-SPSPSPSPSPSTSSSTAAPVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFLIV 63
           AP P S   SPSPSPS+  S         P        P++FSPPLIAMVVV+A AFL V
Sbjct: 5   APPPRSGDNSPSPSPSSGISEEILSRSSDP--------PLEFSPPLIAMVVVLAAAFLFV 64

Query: 64  TYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRR----ARSYLPSSSGGDLDSLPYDSPF 123
           TYSRLISR  + P+        RR+RRWR RRRR    + +   S+S  DL S    SPF
Sbjct: 65  TYSRLISRRFLSPLF-------RRFRRWRCRRRRLLHLSSASSASTSSSDLRSF---SPF 124

Query: 124 FEHTDGFHV--FSPYGLDESIIKTIPLSVYTAKS---------RRDSRDRECAVCLLEFE 183
               D FH   +SPYGLD+S+IKT+PL +Y+A +            +  R+CAVCLLEFE
Sbjct: 125 --PFDSFHYSSYSPYGLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFE 184

Query: 184 DDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCR------AVVFRPESPFTPVMAARIRP 243
           + DYVRTLP+C HAFH++CID WLRSH NCPLCR      A V  P SPF P+MA RIRP
Sbjct: 185 EGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLMAPRIRP 244

Query: 244 SLDETILQSIVLEPLAEGPI-PNRDSYHATESEITPCVDEPRNSNSLEDQMN---GRDFL 303
           SLD+    +I++     G I P+R +++   ++ T   ++     S+E+Q +    R   
Sbjct: 245 SLDDEENNAIII----RGEITPSRSNWNTIAADTT---NDQEIRASVEEQSSPAISRFRE 304

Query: 304 LKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSL-PKARVFSFRYYRG 363
           LKRSYSF  ER   SER+ +EPAT SPWRYRR S W+KR SPFG+L  K+RVFSFRYYR 
Sbjct: 305 LKRSYSFECERESESERVTMEPATVSPWRYRR-STWNKRQSPFGNLISKSRVFSFRYYRS 364

Query: 364 MKSPFFRRR---GGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSS 414
            KSPFFRRR   G F+P+SE          G SSRR+KSMTSPMF R+       A  SS
Sbjct: 365 TKSPFFRRRSSAGVFYPISERI-----PATGSSSRRTKSMTSPMFFRT-------APHSS 404

[Close]

BLAST of Csor.00g028550 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 2.1e-20
Identity = 62/171 (36.26%), Postives = 92/171 (53.80%), Query Frame = 0


Query: 43  DFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLP 102
           DFSP LIA++ ++A+AF++V+Y  LIS++                      RRR  S   
Sbjct: 55  DFSPLLIALIGILASAFILVSYYTLISKYC--------------------HRRRHNSSST 114

Query: 103 SSSGGDLDSLPYDSPFFEHTDGFHVFSPY---------GLDESIIKTIPLSVYTAKSRRD 162
           S++  +  S  Y      + +     +P          GLDES+IK+I +  Y  K    
Sbjct: 115 SAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGLDESLIKSITVYKY-RKMDGF 174

Query: 163 SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVV 205
               +C+VCL EF++++ +R LP C+HAFHV CID WL+SH+NCPLCRA +
Sbjct: 175 VESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRAFI 204

[Close]

BLAST of Csor.00g028550 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 87.8 bits (216), Expect = 2.2e-17
Identity = 74/260 (28.46%), Postives = 123/260 (47.31%), Query Frame = 0


Query: 48  LIAMVVVIATAFLIVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGG 107
           +++ +V++    +++ +  L +R        L+R  RR  RR  R RR    +  +    
Sbjct: 31  MLSAIVILFFVVILMVFLHLYAR------WYLLRARRRHLRRRSRNRRATMVFFTADPS- 90

Query: 108 DLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFE 167
                         T    V +  GLD ++IK++P+  ++ ++ +D    ECAVCL EFE
Sbjct: 91  --------------TAATSVVASRGLDPNVIKSLPVFTFSDETHKD--PIECAVCLSEFE 150

Query: 168 DDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRP---SLD 227
           + +  R LP C H FHVDCID+W  SH+ CPLCR++V    +      AAR R    ++D
Sbjct: 151 ESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLV-ESLAGIESTAAAREREVVIAVD 210

Query: 228 ETILQSIVLEP-----LAEGPIPNRDSYHATE--SEITPCVDEPRNS-NSLEDQMNGRDF 287
              +  +V+EP     L + P  +  S    E        ++ PR + +  ED++  RD 
Sbjct: 211 SDPV--LVIEPSSSSGLTDEPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDS 264

Query: 288 LLKRSYSFGFERSLASERMI 297
              +S+     R L+  RM+
Sbjct: 271 PASQSFRSPMSRMLSFTRML 264

[Close]

BLAST of Csor.00g028550 vs. TAIR 10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63 )

HSP 1 Score: 85.9 bits (211), Expect = 8.4e-17
Identity = 60/160 (37.50%), Postives = 76/160 (47.50%), Query Frame = 0


Query: 48  LIAMVVVIATAFLIVTYSRLISRHVIPPI---LLLIRRHRRRWRRWRRRRRRARSYLPSS 107
           L+A +V +    L V      +R    P         RHRRR RR RRR       +PS 
Sbjct: 30  LLAALVFLLLVVLFVLLLHFYARFFWSPSHQDFSAAARHRRRRRRNRRRTVTTTRIIPSL 89

Query: 108 SGGDLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLL 167
             G  D     SP    T         GLD S+I +IPL VY      +  + EC +CL 
Sbjct: 90  PLGGFDD-GVSSPAATATR-----DDKGLDSSVISSIPLFVYEENEEEEDEEEECVICLG 149

Query: 168 EFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVV 205
            +E  D+ R L  C H FHV+CID+WL SH+ CPLCR+ V
Sbjct: 150 LWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSPV 183

The following BLAST results are available for this feature:

BLAST of Csor.00g028550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q67YI6	2.0e-87	51.36	RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2	[more]
Q9SRQ8	3.0e-19	36.26	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
Q7XLY8	2.4e-16	37.89	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q8L9T5	3.1e-16	28.46	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
Q9LUZ9	1.2e-15	37.50	RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1	[more]

BLAST of Csor.00g028550 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571140.1	6.07e-296	100.00	RING-H2 finger protein ATL65, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022943929.1	5.81e-294	99.52	RING-H2 finger protein ATL65 [Cucurbita moschata] >KAG7010952.1 RING-H2 finger p...	[more]
XP_023511773.1	2.26e-289	98.31	RING-H2 finger protein ATL65 [Cucurbita pepo subsp. pepo]	[more]
XP_022986546.1	2.08e-287	97.82	RING-H2 finger protein ATL65 [Cucurbita maxima]	[more]
XP_038902895.1	7.29e-267	92.84	RING-H2 finger protein ATL65 [Benincasa hispida]	[more]

BLAST of Csor.00g028550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FVL7	2.81e-294	99.52	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111448502...	[more]
A0A6J1JBG1	1.01e-287	97.82	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111484253 P...	[more]
A0A0A0LIL3	1.70e-264	91.21	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G238760 PE...	[more]
A0A1S4E2C5	1.10e-258	90.98	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103498427 PE=3 ...	[more]
A0A5A7TSC8	1.93e-241	93.21	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]

BLAST of Csor.00g028550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18930.1	1.4e-88	51.36	RING/U-box superfamily protein	[more]
AT3G18930.2	1.4e-88	51.36	RING/U-box superfamily protein	[more]
AT3G03550.1	2.1e-20	36.26	RING/U-box superfamily protein	[more]
AT3G16720.1	2.2e-17	28.46	TOXICOS EN LEVADURA 2	[more]
AT5G58580.1	8.4e-17	37.50	TOXICOS EN LEVADURA 63	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 159..200 e-value: 1.5E-6 score: 37.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 158..201 e-value: 2.0E-13 score: 50.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 159..201 score: 12.208971
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 122..205 e-value: 3.8E-22 score: 79.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	PANTHER	PTHR45676:SF74	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 11..384
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 158..201 e-value: 1.39094E-19 score: 79.6533
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 150..207
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 11..384

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g028550.m01	Csor.00g028550.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0031625	ubiquitin protein ligase binding