Csor.00g028480 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g028480
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	B3 domain-containing transcription factor VRN1-like
Location	Csor_Chr20: 4446190 .. 4449751 (-)
RNA-Seq Expression	Csor.00g028480
Synteny	Csor.00g028480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGATTTTTCAGCTTTTCGAACGGGCGGATTCAAGAGGAAAATGCCGCGCCCTTATTTTCACAAGCTTGTGCTCTCCTCCACTATCCAAGCTAGGAAATTGGTACTCTGTTGATTCTTTTTCTGTTTGATTTTTTCTGGCTTTTGCTTCCTTTGCTTGTTTATCGAAAAAATCAGGCTCAACTCCTTTTGCTGTTTCTTTTTCTTTTGGAGTTTCTCTAGTATTGCTCTTTGTGTATCTCGTGCTGAGTTCTTTGGCTCTTCAACGAATTTTCTGATGGAATTAAGCTAAAACCCTGATTTCTATGTTTTTTTTAATCAGGGAAGACGGGGGAAATTATCGGGATATACTCGATGTTCTTGATGATTTACTTCTCTGTTTGTTAGTTTTGATCAATCGAAGAAGTTATTAGGCTCAAAACTGTTCGTTCCTTGACTATTATTACTGAATTTGGAGCTGAAAGTTTTCATCATTTAAGCTCATTAACCATGATTTTTTTGTTAGTTTCAGCAATCTAAGGCTATGCATTGGTTTTGCTTTCAAAATGATTTCATATTCAGTTTGCATGATTGGGCAGGTTATGTTTCCGTCAGCTGAATATCACTTGGGAGTAAAATCCCAATTTTCTGGGGCTCATTTTGACTGAATATTCTCAATTCTAGGCCCCTGCCCTTCAAGTTCTCGCTTCTCAGCTTCTAGGGATAGCATTCTTTTGATTTGTTCTTATTTGATGTACAAATATTGCTATATGCTAATCATAAAAAAATAAAGGTTTTGCTTCCTATTTCACCAATTCGTTTATATTTTTGAGGTTCTCTGAGAAGAATTTTCGAAGTAAGATGACCATTATTTCATCCTAAGCTGTGAGATATCATATATATAATAAATCAGAGAATTTTGTGTTCATTTGCAAATACTCTCTTGAAATATCTTGTCAACTGTTAATTGTGGAAATAAACAATCCATTATCATCATTCTTTACCATATGAAGATTATAACTTAATCCCTCAGTAACAAGTACTACTATATCTTTCCATTGTCTCTTAGTGCTAAAGTAGTCCAGTTGAGTAGTTGGGATATAACAGCTCAAACCCACCATTAGTAGATATTGTCTTCTTTGGGCTTTCCCTTTCGAGCTTCTCCTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCATATCCTTATAAAGAATGCTTCGTTCCCTCCCCTCGGTTGAGTGTCCTTGTTGAAACTCGTTTCTCTCTCCAATTGTGTGGGATCACAACCCAGCGTCCTTGTTGGTACACCGCCCGGTGTCTGGCTCTGATACTATTTGTATTAGCTAAAGCCCACCACTAGCAGATATTGTCTTCTTTGGGCTTTCCCTTTCGGGCTTCCAAGGTTTTTAAAATGCATATGCTAGAAAGAGGTTTCCACACTCTTATAAAGAATATTTTTGTTCCCCTCTCCAACCGATGTGGGATCTCACATGAGATCTTAATGAAAGCAAACAAACTTCATTTTCCTTCTGTTGTATTGTTATTCTTGCTATACATCGTGTTAGCTTCGTTTATTCTTGCTGCACATCATGTTCACATACTGCTTTGGGATTGCTTTATTGGTGGTATGAAATTACAAAAGAAAGAGGAAACCCTCAGTTAAGAGAATTTCAAAAGACCTCTCCAATTGGAAAGGAGAGTTGAAAGCTATAGTGATGAAATAAGGGGAGCATTTACGCTAAGTCACAACCATGTTAATTATAGCGTGGGAGTTCATTTTTTGGAAGATTCTTATATTTCTTTCTTGTCAGATGCTCTCCAGCAGTAGGCTCTTATAAAATTCTTCGAAAGATGTTTTGTTTCATTTTGAAAGGTAGACCTCCATTGGTGTGTGAGAATAAAAGCTTTGGATCTTTTGGGGTTGTTTGTTTCTTATAATGCAGTCTATGCCGTCATTTACTTTTACTTGGTTCTTTTATGCTGGGCTTTCCTTTCTTTGCATTGCCCTTTTGTTCATCATTTTTTTTTATCTCTGATGGAAAATATCTGTGTGGTTGGCTACGGAAACTTTATAGAACTCCTTTGTGTCTTTAATCATAAATCAAGTGTTATATTCCTTTTTCAATAAGGCAACATTTCCCTTTGAATCAGCCTGCTGAATGATCATACCACTGCAGTCGTCTTGTCAGATATGTTCTATTTGTTGGAATGGAGTTAAGTTTCTATATTATCAATCATTTGTGTGACCCCCATCACTGGTCAATATTTACAGAGAATCCCAGAAACTTTTGTCAGGATGATCAGGGATGAGCTTTCTGGAGTTGCTACCCTTACTGTTCCCGATGGCCATGTTTGGCGTGTGGGTTTGAGGAAAGTCGATAACAAATTTTGGTTTGAAGATGGTTGGCATGGATTTCTTGAGCATTACTCCATACGGGTTGGGTACTTGTTAGTATTCAGATACGAGGGAAACTCGGCGTTCTGTGTCTTTATCTTTAATCTTAATACATCTGAAATAAACTACCAATCTGCTGCACTCGGTGGTAACCAAAGGAATAATTACAGCATTCAAAACAGAATCTTTGAAGAATTGGAGGATTATGACATTCCTGAAGCCATTCCTTCCAATCAGTCCATGAATTCTGGTTCTTTGCGAAATAAGCTATTTGGTGATGAATGGAATCCGCACCAATCAAAATCTGCAAGTACGTTGCAAGCCGAGTATTTATCTACTCGTGATATTGGGGTTCAGTTTAGTGCTATGGAGGTTAAAAAATCTGCAGATGAGGTGAGATTTCAGAATTTGGGTGATGATGTACACAGAATTAAAAAGAGTGGAGGCAAAAAGCGAAAACTTGATTCTAGTAAGCTCCCGTCGCATCGCTTGACATTTTAGCAATGTAAATGTTTGAATTACCTTACCCGTAATTTTCGATCTGCAGGCGAGCACCATCCATCATCTGCTCATAGTGAAGATTTAGGAGACATTCGCTTTAGATTTTATGAAAGTGCCTCTGCTAGAAAGAGAACTGTGACAGCAGAAGAAAGAGAAAGAGCTATCAACTCTGCAAAAGCTTTCGAGCCCGGTAATCCGTTCTGCAGGGTCGTCTTGCGACCATCGTATCTGTATAGAGGTTGTATAATGGTAAGATATTTGGGTTGCTGAAATATATAAATGGATGCTTTTAAATTGAGTTATGCAAGCTCTAACAATGGTAGTCTGCACTCTCTTTTACAGTATTTGCCATCTTGCTTTGCTGAAAAGAATCTAAGTGGGGTTTCGGGATTCATCAAACTTCAGACACCGGACGGGAGACAGTGGCCGGTCCGATGTCTTTATAAAGTTGGTAGAGCAAAGTTAAGTCAGGGATGGTATGAGTTTTGCCTGGAAAATAATTTAGGGGAGGGGGACGTTTGTGTGTTCGAGCTTCTCAGGATGAGAGAAATCGTGCTCAAAGTTACCATGTTTCGTGTCATGGAAGAAGGCGGACGAATGGCTAACCCGAATCCTACCAGCACTATGAATCCTCCTCCGCTGCGAAGTGTTACTCAGATTAAGCTGATCAGAAACTAA

mRNA sequence

ATGACTGATTTTTCAGCTTTTCGAACGGGCGGATTCAAGAGGAAAATGCCGCGCCCTTATTTTCACAAGCTTGTGCTCTCCTCCACTATCCAAGCTAGGAAATTGAGAATCCCAGAAACTTTTGTCAGGATGATCAGGGATGAGCTTTCTGGAGTTGCTACCCTTACTGTTCCCGATGGCCATGTTTGGCGTGTGGGTTTGAGGAAAGTCGATAACAAATTTTGGTTTGAAGATGGTTGGCATGGATTTCTTGAGCATTACTCCATACGGGTTGGGTACTTGTTAGTATTCAGATACGAGGGAAACTCGGCGTTCTGTGTCTTTATCTTTAATCTTAATACATCTGAAATAAACTACCAATCTGCTGCACTCGGTGGTAACCAAAGGAATAATTACAGCATTCAAAACAGAATCTTTGAAGAATTGGAGGATTATGACATTCCTGAAGCCATTCCTTCCAATCAGTCCATGAATTCTGGTTCTTTGCGAAATAAGCTATTTGGTGATGAATGGAATCCGCACCAATCAAAATCTGCAAGTACGTTGCAAGCCGAGTATTTATCTACTCGTGATATTGGGGTTCAGTTTAGTGCTATGGAGGTTAAAAAATCTGCAGATGAGGTGAGATTTCAGAATTTGGGTGATGATGTACACAGAATTAAAAAGAGTGGAGGCAAAAAGCGAAAACTTGATTCTAGCGAGCACCATCCATCATCTGCTCATAGTGAAGATTTAGGAGACATTCGCTTTAGATTTTATGAAAGTGCCTCTGCTAGAAAGAGAACTGTGACAGCAGAAGAAAGAGAAAGAGCTATCAACTCTGCAAAAGCTTTCGAGCCCGGTAATCCGTTCTGCAGGGTCGTCTTGCGACCATCGTATCTGTATAGAGGTTGTATAATGTATTTGCCATCTTGCTTTGCTGAAAAGAATCTAAGTGGGGTTTCGGGATTCATCAAACTTCAGACACCGGACGGGAGACAGTGGCCGGTCCGATGTCTTTATAAAGTTGGTAGAGCAAAGTTAAGTCAGGGATGGTATGAGTTTTGCCTGGAAAATAATTTAGGGGAGGGGGACGTTTGTGTGTTCGAGCTTCTCAGGATGAGAGAAATCGTGCTCAAAGTTACCATGTTTCGTGTCATGGAAGAAGGCGGACGAATGGCTAACCCGAATCCTACCAGCACTATGAATCCTCCTCCGCTGCGAAGTGTTACTCAGATTAAGCTGATCAGAAACTAA

Coding sequence (CDS)

ATGACTGATTTTTCAGCTTTTCGAACGGGCGGATTCAAGAGGAAAATGCCGCGCCCTTATTTTCACAAGCTTGTGCTCTCCTCCACTATCCAAGCTAGGAAATTGAGAATCCCAGAAACTTTTGTCAGGATGATCAGGGATGAGCTTTCTGGAGTTGCTACCCTTACTGTTCCCGATGGCCATGTTTGGCGTGTGGGTTTGAGGAAAGTCGATAACAAATTTTGGTTTGAAGATGGTTGGCATGGATTTCTTGAGCATTACTCCATACGGGTTGGGTACTTGTTAGTATTCAGATACGAGGGAAACTCGGCGTTCTGTGTCTTTATCTTTAATCTTAATACATCTGAAATAAACTACCAATCTGCTGCACTCGGTGGTAACCAAAGGAATAATTACAGCATTCAAAACAGAATCTTTGAAGAATTGGAGGATTATGACATTCCTGAAGCCATTCCTTCCAATCAGTCCATGAATTCTGGTTCTTTGCGAAATAAGCTATTTGGTGATGAATGGAATCCGCACCAATCAAAATCTGCAAGTACGTTGCAAGCCGAGTATTTATCTACTCGTGATATTGGGGTTCAGTTTAGTGCTATGGAGGTTAAAAAATCTGCAGATGAGGTGAGATTTCAGAATTTGGGTGATGATGTACACAGAATTAAAAAGAGTGGAGGCAAAAAGCGAAAACTTGATTCTAGCGAGCACCATCCATCATCTGCTCATAGTGAAGATTTAGGAGACATTCGCTTTAGATTTTATGAAAGTGCCTCTGCTAGAAAGAGAACTGTGACAGCAGAAGAAAGAGAAAGAGCTATCAACTCTGCAAAAGCTTTCGAGCCCGGTAATCCGTTCTGCAGGGTCGTCTTGCGACCATCGTATCTGTATAGAGGTTGTATAATGTATTTGCCATCTTGCTTTGCTGAAAAGAATCTAAGTGGGGTTTCGGGATTCATCAAACTTCAGACACCGGACGGGAGACAGTGGCCGGTCCGATGTCTTTATAAAGTTGGTAGAGCAAAGTTAAGTCAGGGATGGTATGAGTTTTGCCTGGAAAATAATTTAGGGGAGGGGGACGTTTGTGTGTTCGAGCTTCTCAGGATGAGAGAAATCGTGCTCAAAGTTACCATGTTTCGTGTCATGGAAGAAGGCGGACGAATGGCTAACCCGAATCCTACCAGCACTATGAATCCTCCTCCGCTGCGAAGTGTTACTCAGATTAAGCTGATCAGAAACTAA

Protein sequence

MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN

Homology

[Close]

BLAST of Csor.00g028480 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 2.2e-107
Identity = 213/366 (58.20%), Postives = 252/366 (68.85%), Query Frame = 0


Query: 16  MPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDGHVWRVGLRKVDNKFW 75
           MPRP+FHKL+ SSTIQ ++LR+P+ FV   +DELS    LTVPDGHVWRVGLRK DNK W
Sbjct: 1   MPRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIW 60

Query: 76  FEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQ 135
           F+DGW  F++ YSIR+GYLL+FRYEGNSAF V+IFNL+ SEINY S  L  +  N++  +
Sbjct: 61  FQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFK-R 120

Query: 136 NRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQ 195
            R+FE+LED D     PS  S+    L       E     +K  ++   + L T  +   
Sbjct: 121 ARLFEDLEDEDAEVIFPS--SVYPSPL------PESTVPANKGYASSAIQTLFTGPV--- 180

Query: 196 FSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSEDLGDIRFRFYES 255
                    A+E           +I K  G+K+K    E   SSA  +D  + R +FYES
Sbjct: 181 --------KAEE------PTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYES 240

Query: 256 ASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVS 315
           ASARKRTVTAEERERAIN+AK FEP NPF RVVLRPSYLYRGCIMYLPS FAEK LSG+S
Sbjct: 241 ASARKRTVTAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGIS 300

Query: 316 GFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCVFELLRMREIVLKVT 375
           GFIK+Q  + +QWPVRCLYK GRAK SQGWYEF LENNLGEGDVCVFELLR R+ VLKVT
Sbjct: 301 GFIKVQLAE-KQWPVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVT 339

Query: 376 MFRVME 382
            FRV E
Sbjct: 361 AFRVNE 339

[Close]

BLAST of Csor.00g028480 vs. ExPASy Swiss-Prot
Match: Q9XIB5 (B3 domain-containing protein REM19 OS=Arabidopsis thaliana OX=3702 GN=REM19 PE=1 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.1e-58
Identity = 115/171 (67.25%), Postives = 135/171 (78.95%), Query Frame = 0


Query: 211 QNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSEDLGDIRFRFYESASARKRTVTAEERER 270
           ++  ++  ++ K  G+K+K  + E   SS    D  + R +FYESASARKRTVTAEERER
Sbjct: 55  ESKAEETPKVLKKRGRKKKNPNPEEVNSSTPGGDDSENRSKFYESASARKRTVTAEERER 114

Query: 271 AINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPV 330
           A+N+AK FEP NP+ RVVLRPSYLYRGCIMYLPS FAEK LSG+SGFIKLQ  + +QWPV
Sbjct: 115 AVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGE-KQWPV 174

Query: 331 RCLYKVGRAKLSQGWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVME 382
           RCLYK GRAK SQGWYEF LENN+GEGDVCVFELLR R+ VL+VT FRV E
Sbjct: 175 RCLYKAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFRVNE 224

[Close]

BLAST of Csor.00g028480 vs. ExPASy Swiss-Prot
Match: Q9ZSH7 (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 8.1e-17
Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 0


Query: 17  PRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDGHVWRVGLRKVDNKFWF 76
           P   F KLVL ST++ + +RIP  FV++   +LS V TL  P G+   + L+++  + WF
Sbjct: 26  PVKKFFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEIWF 85

Query: 77  EDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINY 120
            +GW  F E +SI  G+ L+F Y+ NS+F V IFN +  E NY
Sbjct: 86  HEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNY 128

[Close]

BLAST of Csor.00g028480 vs. ExPASy Swiss-Prot
Match: Q84R27 (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18960 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.5e-15
Identity = 41/103 (39.81%), Postives = 62/103 (60.19%), Query Frame = 0


Query: 17  PRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDGHVWRVGLRKVDNKFWF 76
           P   F KLVL ST++ + ++IP  FV++   +LS V TL  P G    + L+++  + WF
Sbjct: 26  PVKKFFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWF 85

Query: 77  EDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINY 120
            +GW  F E +SI  G+ L+F Y+ NS+F V IFN++  E  Y
Sbjct: 86  HEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKY 128

[Close]

BLAST of Csor.00g028480 vs. ExPASy Swiss-Prot
Match: Q9XIB4 (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 3.5e-12
Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 21  FHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGW 80
           F K++L S I  + +++P  FVR    +L+   TL  P G    + ++++ ++ WFE GW
Sbjct: 34  FIKIILLSRIIEKMMKVPARFVR-FGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGW 93

Query: 81  HGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINY 120
             F E +S+  G+ L F YEG+S F V IF+++ SEI Y
Sbjct: 94  SEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEY 131

[Close]

BLAST of Csor.00g028480 vs. NCBI nr
Match: KAG6571147.1 (B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 837 bits (2163), Expect = 1.57e-306
Identity = 411/411 (100.00%), Postives = 411/411 (100.00%), Query Frame = 0


Query: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG 60
           MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG
Sbjct: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG 60

Query: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120
           HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ
Sbjct: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS 180
           SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS
Sbjct: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS 180

Query: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSA 240
           TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSA
Sbjct: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSA 240

Query: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM 300
           HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM
Sbjct: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM 300

Query: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360
           YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC
Sbjct: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360

Query: 361 VFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN 411
           VFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN
Sbjct: 361 VFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN 411

[Close]

BLAST of Csor.00g028480 vs. NCBI nr
Match: XP_023512691.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023521756.1 B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 834 bits (2154), Expect = 3.70e-305
Identity = 409/411 (99.51%), Postives = 409/411 (99.51%), Query Frame = 0


Query: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG 60
           MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPE FVRMIRDELSGVATLTVPDG
Sbjct: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPEAFVRMIRDELSGVATLTVPDG 60

Query: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120
           HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ
Sbjct: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS 180
           SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS
Sbjct: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS 180

Query: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSA 240
           TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSA
Sbjct: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSA 240

Query: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM 300
           HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM
Sbjct: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM 300

Query: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360
           YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC
Sbjct: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360

Query: 361 VFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN 411
           VFELLRMREIVLKVTMFRVMEEGGRMANPNPT TMNPPPLRSVTQIKLIRN
Sbjct: 361 VFELLRMREIVLKVTMFRVMEEGGRMANPNPTGTMNPPPLRSVTQIKLIRN 411

[Close]

BLAST of Csor.00g028480 vs. NCBI nr
Match: XP_022943957.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 833 bits (2152), Expect = 7.47e-305
Identity = 409/411 (99.51%), Postives = 409/411 (99.51%), Query Frame = 0


Query: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG 60
           MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG
Sbjct: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG 60

Query: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120
           HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ
Sbjct: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS 180
           SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS
Sbjct: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS 180

Query: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSA 240
           TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRK DSSEHHPSSA
Sbjct: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKPDSSEHHPSSA 240

Query: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM 300
           HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM
Sbjct: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM 300

Query: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360
           YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC
Sbjct: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360

Query: 361 VFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN 411
           VFELLRMREIVLKVTMFRVMEEGGRMANPNPT TMNPPPLRSVTQIKLIRN
Sbjct: 361 VFELLRMREIVLKVTMFRVMEEGGRMANPNPTGTMNPPPLRSVTQIKLIRN 411

[Close]

BLAST of Csor.00g028480 vs. NCBI nr
Match: XP_022986547.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 828 bits (2139), Expect = 7.17e-303
Identity = 407/411 (99.03%), Postives = 408/411 (99.27%), Query Frame = 0


Query: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG 60
           MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG
Sbjct: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG 60

Query: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120
           HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ
Sbjct: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS 180
           SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPS QSMNSGSLRNKLFGDEWNPHQSKSAS
Sbjct: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSIQSMNSGSLRNKLFGDEWNPHQSKSAS 180

Query: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSA 240
           TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSS+HHPSSA
Sbjct: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSDHHPSSA 240

Query: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM 300
           HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM
Sbjct: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM 300

Query: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360
           YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC
Sbjct: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360

Query: 361 VFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN 411
           VFELLRMREIVLKVTMFRVMEEGGRMANPN T TMNPPPLRSVTQIKLIRN
Sbjct: 361 VFELLRMREIVLKVTMFRVMEEGGRMANPNSTGTMNPPPLRSVTQIKLIRN 411

[Close]

BLAST of Csor.00g028480 vs. NCBI nr
Match: XP_022148609.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Momordica charantia])

HSP 1 Score: 792 bits (2045), Expect = 1.47e-288
Identity = 384/411 (93.43%), Postives = 399/411 (97.08%), Query Frame = 0


Query: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG 60
           MTDFSAFRTGGFKRKMPRPYFHKL+LSSTIQARKLRIP+TF+RMIRDELS VATLTVPDG
Sbjct: 1   MTDFSAFRTGGFKRKMPRPYFHKLILSSTIQARKLRIPDTFLRMIRDELSAVATLTVPDG 60

Query: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120
           HVWRVGLRK DNKFWFEDGWHGFLEHYSIRVGY LVFRYEGNS+FCVF+FNLNTSEINYQ
Sbjct: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGYFLVFRYEGNSSFCVFMFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS 180
           SAALGGNQRNNYSIQNRIFEE+EDYDIPE IPSNQSMNSGSLRNKLFGDEWN HQSK+AS
Sbjct: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEGIPSNQSMNSGSLRNKLFGDEWNLHQSKAAS 180

Query: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSA 240
           TLQAEYLSTRDIGVQFSA+EVKKSADEVRFQNLGDDVHR+KKSG KKRK+DSSEHHPS+ 
Sbjct: 181 TLQAEYLSTRDIGVQFSAVEVKKSADEVRFQNLGDDVHRVKKSGSKKRKIDSSEHHPST- 240

Query: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM 300
           HSEDLGDIRFRFYESASARKRTVTAEERERAIN+AKAFEP NPFCRVVLRPSYLYRGCIM
Sbjct: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINAAKAFEPANPFCRVVLRPSYLYRGCIM 300

Query: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360
           YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC
Sbjct: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360

Query: 361 VFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN 411
           VFELLRMREIVLKVTMFRV+E+ GR+ NPNP S MNPPPLRSVTQIKLIRN
Sbjct: 361 VFELLRMREIVLKVTMFRVIEDAGRLVNPNPASMMNPPPLRSVTQIKLIRN 410

[Close]

BLAST of Csor.00g028480 vs. ExPASy TrEMBL
Match: A0A6J1FUG6 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448529 PE=4 SV=1)

HSP 1 Score: 833 bits (2152), Expect = 3.62e-305
Identity = 409/411 (99.51%), Postives = 409/411 (99.51%), Query Frame = 0


Query: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG 60
           MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG
Sbjct: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG 60

Query: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120
           HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ
Sbjct: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS 180
           SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS
Sbjct: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS 180

Query: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSA 240
           TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRK DSSEHHPSSA
Sbjct: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKPDSSEHHPSSA 240

Query: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM 300
           HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM
Sbjct: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM 300

Query: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360
           YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC
Sbjct: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360

Query: 361 VFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN 411
           VFELLRMREIVLKVTMFRVMEEGGRMANPNPT TMNPPPLRSVTQIKLIRN
Sbjct: 361 VFELLRMREIVLKVTMFRVMEEGGRMANPNPTGTMNPPPLRSVTQIKLIRN 411

[Close]

BLAST of Csor.00g028480 vs. ExPASy TrEMBL
Match: A0A6J1J7V4 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484254 PE=4 SV=1)

HSP 1 Score: 828 bits (2139), Expect = 3.47e-303
Identity = 407/411 (99.03%), Postives = 408/411 (99.27%), Query Frame = 0


Query: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG 60
           MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG
Sbjct: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG 60

Query: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120
           HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ
Sbjct: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS 180
           SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPS QSMNSGSLRNKLFGDEWNPHQSKSAS
Sbjct: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSIQSMNSGSLRNKLFGDEWNPHQSKSAS 180

Query: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSA 240
           TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSS+HHPSSA
Sbjct: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSDHHPSSA 240

Query: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM 300
           HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM
Sbjct: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM 300

Query: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360
           YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC
Sbjct: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360

Query: 361 VFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN 411
           VFELLRMREIVLKVTMFRVMEEGGRMANPN T TMNPPPLRSVTQIKLIRN
Sbjct: 361 VFELLRMREIVLKVTMFRVMEEGGRMANPNSTGTMNPPPLRSVTQIKLIRN 411

[Close]

BLAST of Csor.00g028480 vs. ExPASy TrEMBL
Match: A0A6J1D4H6 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017227 PE=4 SV=1)

HSP 1 Score: 792 bits (2045), Expect = 7.11e-289
Identity = 384/411 (93.43%), Postives = 399/411 (97.08%), Query Frame = 0


Query: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG 60
           MTDFSAFRTGGFKRKMPRPYFHKL+LSSTIQARKLRIP+TF+RMIRDELS VATLTVPDG
Sbjct: 1   MTDFSAFRTGGFKRKMPRPYFHKLILSSTIQARKLRIPDTFLRMIRDELSAVATLTVPDG 60

Query: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120
           HVWRVGLRK DNKFWFEDGWHGFLEHYSIRVGY LVFRYEGNS+FCVF+FNLNTSEINYQ
Sbjct: 61  HVWRVGLRKADNKFWFEDGWHGFLEHYSIRVGYFLVFRYEGNSSFCVFMFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS 180
           SAALGGNQRNNYSIQNRIFEE+EDYDIPE IPSNQSMNSGSLRNKLFGDEWN HQSK+AS
Sbjct: 121 SAALGGNQRNNYSIQNRIFEEMEDYDIPEGIPSNQSMNSGSLRNKLFGDEWNLHQSKAAS 180

Query: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSA 240
           TLQAEYLSTRDIGVQFSA+EVKKSADEVRFQNLGDDVHR+KKSG KKRK+DSSEHHPS+ 
Sbjct: 181 TLQAEYLSTRDIGVQFSAVEVKKSADEVRFQNLGDDVHRVKKSGSKKRKIDSSEHHPST- 240

Query: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIM 300
           HSEDLGDIRFRFYESASARKRTVTAEERERAIN+AKAFEP NPFCRVVLRPSYLYRGCIM
Sbjct: 241 HSEDLGDIRFRFYESASARKRTVTAEERERAINAAKAFEPANPFCRVVLRPSYLYRGCIM 300

Query: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360
           YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC
Sbjct: 301 YLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVC 360

Query: 361 VFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN 411
           VFELLRMREIVLKVTMFRV+E+ GR+ NPNP S MNPPPLRSVTQIKLIRN
Sbjct: 361 VFELLRMREIVLKVTMFRVIEDAGRLVNPNPASMMNPPPLRSVTQIKLIRN 410

[Close]

BLAST of Csor.00g028480 vs. ExPASy TrEMBL
Match: A0A5A7TRG7 (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005510 PE=4 SV=1)

HSP 1 Score: 789 bits (2037), Expect = 1.27e-287
Identity = 386/412 (93.69%), Postives = 399/412 (96.84%), Query Frame = 0


Query: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG 60
           MTDFSAFRTGGFKRKMPRP+FHKLVLSSTIQARKLR+PETFVR+IRDELS VATLTVPDG
Sbjct: 1   MTDFSAFRTGGFKRKMPRPHFHKLVLSSTIQARKLRLPETFVRLIRDELSAVATLTVPDG 60

Query: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120
           HVWRVGLRK DNKFWFEDGW GFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ
Sbjct: 61  HVWRVGLRKADNKFWFEDGWQGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS 180
           SAAL  NQRNNYSIQNRIFEE+EDYDIPEAIPSNQSMNSGSLRNKLFGDEWN HQSKSAS
Sbjct: 121 SAALSSNQRNNYSIQNRIFEEMEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNLHQSKSAS 180

Query: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDV-HRIKKSGGKKRKLDSSEHHPSS 240
           TLQAEYLSTRDIGVQFSA+E+KKSADEVRFQNLGDD  HR+KKSG KKRK++SSEHHPS+
Sbjct: 181 TLQAEYLSTRDIGVQFSAVEIKKSADEVRFQNLGDDAAHRVKKSGSKKRKIESSEHHPSA 240

Query: 241 AHSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCI 300
            +SEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCI
Sbjct: 241 HNSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCI 300

Query: 301 MYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDV 360
           MYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDV
Sbjct: 301 MYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDV 360

Query: 361 CVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN 411
           CVFELLRMREIVLKVTMFRV+EEGGRMANPNP S MNPPPLRSV+ IKLIRN
Sbjct: 361 CVFELLRMREIVLKVTMFRVIEEGGRMANPNPASMMNPPPLRSVSHIKLIRN 412

[Close]

BLAST of Csor.00g028480 vs. ExPASy TrEMBL
Match: A0A0A0LIK1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237690 PE=4 SV=1)

HSP 1 Score: 789 bits (2037), Expect = 1.27e-287
Identity = 387/412 (93.93%), Postives = 399/412 (96.84%), Query Frame = 0


Query: 1   MTDFSAFRTGGFKRKMPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDG 60
           MTDFSAFRTGGFKRKMPRP+FHKLVL+STIQARKLRIPETFVRMIRDELS VATLTVPDG
Sbjct: 1   MTDFSAFRTGGFKRKMPRPHFHKLVLTSTIQARKLRIPETFVRMIRDELSAVATLTVPDG 60

Query: 61  HVWRVGLRKVDNKFWFEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQ 120
           HVWRVGLRK DNKFWFEDGW GFLEHYSIRVGYLLVFRYEGNS+FCVFIFNLNTSEINYQ
Sbjct: 61  HVWRVGLRKADNKFWFEDGWQGFLEHYSIRVGYLLVFRYEGNSSFCVFIFNLNTSEINYQ 120

Query: 121 SAALGGNQRNNYSIQNRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSAS 180
           SAAL  NQRNNYSIQNRIFEE+EDYDIPEAIPSNQSMNSGSLRNKLFGDEWN HQSKSAS
Sbjct: 121 SAALSNNQRNNYSIQNRIFEEMEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNLHQSKSAS 180

Query: 181 TLQAEYLSTRDIGVQFSAMEVKKSADEVRFQNLGDDV-HRIKKSGGKKRKLDSSEHHPSS 240
           TLQAEYLSTRDIGVQFSA+EVKKSADEVRFQNLGDD  HR+KKSG KKRK++SSEHHPS+
Sbjct: 181 TLQAEYLSTRDIGVQFSAVEVKKSADEVRFQNLGDDAAHRVKKSGSKKRKIESSEHHPSA 240

Query: 241 AHSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCI 300
            +SEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCI
Sbjct: 241 HNSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCI 300

Query: 301 MYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDV 360
           MYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDV
Sbjct: 301 MYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDV 360

Query: 361 CVFELLRMREIVLKVTMFRVMEEGGRMANPNPTSTMNPPPLRSVTQIKLIRN 411
           CVFELLRMREIVLKVTMFRV+EEGGRMANPNP S MNPPPLRSV+ IKLIRN
Sbjct: 361 CVFELLRMREIVLKVTMFRVIEEGGRMANPNPASMMNPPPLRSVSHIKLIRN 412

[Close]

BLAST of Csor.00g028480 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 390.6 bits (1002), Expect = 1.6e-108
Identity = 213/366 (58.20%), Postives = 252/366 (68.85%), Query Frame = 0


Query: 16  MPRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDGHVWRVGLRKVDNKFW 75
           MPRP+FHKL+ SSTIQ ++LR+P+ FV   +DELS    LTVPDGHVWRVGLRK DNK W
Sbjct: 1   MPRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIW 60

Query: 76  FEDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALGGNQRNNYSIQ 135
           F+DGW  F++ YSIR+GYLL+FRYEGNSAF V+IFNL+ SEINY S  L  +  N++  +
Sbjct: 61  FQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFK-R 120

Query: 136 NRIFEELEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNPHQSKSASTLQAEYLSTRDIGVQ 195
            R+FE+LED D     PS  S+    L       E     +K  ++   + L T  +   
Sbjct: 121 ARLFEDLEDEDAEVIFPS--SVYPSPL------PESTVPANKGYASSAIQTLFTGPV--- 180

Query: 196 FSAMEVKKSADEVRFQNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSEDLGDIRFRFYES 255
                    A+E           +I K  G+K+K    E   SSA  +D  + R +FYES
Sbjct: 181 --------KAEE------PTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYES 240

Query: 256 ASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVS 315
           ASARKRTVTAEERERAIN+AK FEP NPF RVVLRPSYLYRGCIMYLPS FAEK LSG+S
Sbjct: 241 ASARKRTVTAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGIS 300

Query: 316 GFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCVFELLRMREIVLKVT 375
           GFIK+Q  + +QWPVRCLYK GRAK SQGWYEF LENNLGEGDVCVFELLR R+ VLKVT
Sbjct: 301 GFIKVQLAE-KQWPVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVT 339

Query: 376 MFRVME 382
            FRV E
Sbjct: 361 AFRVNE 339

[Close]

BLAST of Csor.00g028480 vs. TAIR 10
Match: AT1G49480.1 (related to vernalization1 1 )

HSP 1 Score: 228.8 bits (582), Expect = 8.0e-60
Identity = 115/171 (67.25%), Postives = 135/171 (78.95%), Query Frame = 0


Query: 211 QNLGDDVHRIKKSGGKKRKLDSSEHHPSSAHSEDLGDIRFRFYESASARKRTVTAEERER 270
           ++  ++  ++ K  G+K+K  + E   SS    D  + R +FYESASARKRTVTAEERER
Sbjct: 55  ESKAEETPKVLKKRGRKKKNPNPEEVNSSTPGGDDSENRSKFYESASARKRTVTAEERER 114

Query: 271 AINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPV 330
           A+N+AK FEP NP+ RVVLRPSYLYRGCIMYLPS FAEK LSG+SGFIKLQ  + +QWPV
Sbjct: 115 AVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGE-KQWPV 174

Query: 331 RCLYKVGRAKLSQGWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVME 382
           RCLYK GRAK SQGWYEF LENN+GEGDVCVFELLR R+ VL+VT FRV E
Sbjct: 175 RCLYKAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFRVNE 224

[Close]

BLAST of Csor.00g028480 vs. TAIR 10
Match: AT4G01580.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 89.7 bits (221), Expect = 5.8e-18
Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = 0


Query: 17  PRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDGHVWRVGLRKVDNKFWF 76
           P   F KLVL ST++ + +RIP  FV++   +LS V TL  P G+   + L+++  + WF
Sbjct: 26  PVKKFFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEIWF 85

Query: 77  EDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINY 120
            +GW  F E +SI  G+ L+F Y+ NS+F V IFN +  E NY
Sbjct: 86  HEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNY 128

[Close]

BLAST of Csor.00g028480 vs. TAIR 10
Match: AT3G18960.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 85.5 bits (210), Expect = 1.1e-16
Identity = 41/103 (39.81%), Postives = 62/103 (60.19%), Query Frame = 0


Query: 17  PRPYFHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDGHVWRVGLRKVDNKFWF 76
           P   F KLVL ST++ + ++IP  FV++   +LS V TL  P G    + L+++  + WF
Sbjct: 26  PVKKFFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWF 85

Query: 77  EDGWHGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINY 120
            +GW  F E +SI  G+ L+F Y+ NS+F V IFN++  E  Y
Sbjct: 86  HEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKY 128

[Close]

BLAST of Csor.00g028480 vs. TAIR 10
Match: AT1G49475.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 74.3 bits (181), Expect = 2.5e-13
Identity = 37/99 (37.37%), Postives = 59/99 (59.60%), Query Frame = 0


Query: 21  FHKLVLSSTIQARKLRIPETFVRMIRDELSGVATLTVPDGHVWRVGLRKVDNKFWFEDGW 80
           F K++L S I  + +++P  FVR    +L+   TL  P G    + ++++ ++ WFE GW
Sbjct: 34  FIKIILLSRIIEKMMKVPARFVR-FGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGW 93

Query: 81  HGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINY 120
             F E +S+  G+ L F YEG+S F V IF+++ SEI Y
Sbjct: 94  SEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEY 131

The following BLAST results are available for this feature:

BLAST of Csor.00g028480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3W1	2.2e-107	58.20	B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9XIB5	1.1e-58	67.25	B3 domain-containing protein REM19 OS=Arabidopsis thaliana OX=3702 GN=REM19 PE=1...	[more]
Q9ZSH7	8.1e-17	41.75	B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana OX=3702 GN=At4g01...	[more]
Q84R27	1.5e-15	39.81	B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana OX=3702 GN=At3g18...	[more]
Q9XIB4	3.5e-12	37.37	B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana OX=3702 GN=At1g49...	[more]

BLAST of Csor.00g028480 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571147.1	1.57e-306	100.00	B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma ...	[more]
XP_023512691.1	3.70e-305	99.51	B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita pepo s...	[more]
XP_022943957.1	7.47e-305	99.51	B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita moscha...	[more]
XP_022986547.1	7.17e-303	99.03	B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita maxima...	[more]
XP_022148609.1	1.47e-288	93.43	B3 domain-containing transcription factor VRN1-like isoform X1 [Momordica charan...	[more]

BLAST of Csor.00g028480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FUG6	3.62e-305	99.51	B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita mosc...	[more]
A0A6J1J7V4	3.47e-303	99.03	B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita maxi...	[more]
A0A6J1D4H6	7.11e-289	93.43	B3 domain-containing transcription factor VRN1-like isoform X1 OS=Momordica char...	[more]
A0A5A7TRG7	1.27e-287	93.69	B3 domain-containing transcription factor VRN1-like OS=Cucumis melo var. makuwa ...	[more]
A0A0A0LIK1	1.27e-287	93.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237690 PE=4 SV=1	[more]

BLAST of Csor.00g028480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18990.1	1.6e-108	58.20	AP2/B3-like transcriptional factor family protein	[more]
AT1G49480.1	8.0e-60	67.25	related to vernalization1 1	[more]
AT4G01580.1	5.8e-18	41.75	AP2/B3-like transcriptional factor family protein	[more]
AT3G18960.1	1.1e-16	39.81	AP2/B3-like transcriptional factor family protein	[more]
AT1G49475.1	2.5e-13	37.37	AP2/B3-like transcriptional factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 21..113 e-value: 1.7E-12 score: 57.5 coord: 285..380 e-value: 6.4E-20 score: 82.2
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 288..378 e-value: 5.9E-18 score: 64.6 coord: 22..110 e-value: 1.9E-11 score: 43.7
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 285..380 score: 13.972416
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 20..113 score: 13.253239
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 283..378 e-value: 4.47312E-23 score: 90.85
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 19..111 e-value: 3.87503E-17 score: 74.2865
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 13..114 e-value: 1.2E-22 score: 81.7
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 262..382 e-value: 1.5E-37 score: 130.1
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 280..380
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 17..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..242
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 16..167
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 230..395
None	No IPR available	PANTHER	PTHR31920:SF46	B3 DOMAIN TRANSCRIPTION FACTOR VRN1-LIKE PROTEIN	coord: 16..167
None	No IPR available	PANTHER	PTHR31920:SF46	B3 DOMAIN TRANSCRIPTION FACTOR VRN1-LIKE PROTEIN	coord: 230..395

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g028480.m01	Csor.00g028480.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding