Csor.00g027800 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g027800
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RNA-binding protein CP31B
Location	Csor_Chr04: 6216150 .. 6216872 (-)
RNA-Seq Expression	Csor.00g027800
Synteny	Csor.00g027800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGCTACAAAAGTGTATGTTGGAGGCATTCCATATTATTCAACTGAGGACGATATTTTTAGCCTTTTTGAAAGCTGTGGCACTATAACCGAAGTTGATTGTATGAAGTTTCCAGAGAGTGGCAAATTCAGAGGCATTGCAATATTAATTTTCAAGGTATGGTAATCTGATTAATATGAACTTTCATTCCTCTTAGTAGCTAAGATCAATCAAGTCTTGAAGATGTTTCATGATTTATACTTTGTTCTAAGATCATAGGCTTACTGAGAGTGAATGAGTGCAAGTGTTGGGTCCTTTTTGAAGTTAATTGAGGTTAGAAAATGCGGATTTATAAGCTTATTATGACACTAAGATTTCCGACCAAGACGTATATGAACATTATTAAAGAATATTCATATGAGCATACAATTAGCCTTCTCGCACTAAATAGTATATAGCATATCATCTTGTAAGTCTGCTTCATTTGGCTTTTTAAGCTAGAATCAGTCAAGATTCCATCAGTGTTGAAAAAGTATCAAATATTGCTGGTGTGTTTTTCTTTGTAATAGAAATAGTTACCAGAGCTGTGTTGGGGCTGGTGTGGGGATTACAATTTTACTGAATTTTGGATTTCTGGAGGTCAGATTTCTTTAGTTTTCGAGTTACCTTACCACTGTTTACCATTTGCAGACCGAAGCTGCAGCAAAACGAGCACTAGCCATGGATGGAGCTGACATGTGA

mRNA sequence

ATGGTGGCTACAAAAGTGTATGTTGGAGGCATTCCATATTATTCAACTGAGGACGATATTTTTAGCCTTTTTGAAAGCTGTGGCACTATAACCGAAGTTGATTGTATGAAGTTTCCAGAGAGTGGCAAATTCAGAGGCATTGCAATATTAATTTTCAAGACCGAAGCTGCAGCAAAACGAGCACTAGCCATGGATGGAGCTGACATGTGA

Coding sequence (CDS)

ATGGTGGCTACAAAAGTGTATGTTGGAGGCATTCCATATTATTCAACTGAGGACGATATTTTTAGCCTTTTTGAAAGCTGTGGCACTATAACCGAAGTTGATTGTATGAAGTTTCCAGAGAGTGGCAAATTCAGAGGCATTGCAATATTAATTTTCAAGACCGAAGCTGCAGCAAAACGAGCACTAGCCATGGATGGAGCTGACATGTGA

Protein sequence

MVATKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRALAMDGADM

Homology

[Close]

BLAST of Csor.00g027800 vs. ExPASy Swiss-Prot
Match: Q9M3B8 (Phragmoplastin interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=PHIP1 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 5.7e-16
Identity = 42/69 (60.87%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 1   MVATKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKR 60
           +V  K+YVGGIPY STED+I S F SCG I +VDC   PE G F GIA + F TE  AKR
Sbjct: 158 VVPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGIAFITFDTEDGAKR 217

Query: 61  ALAMDGADM 70
           ALA D A M
Sbjct: 218 ALAFDRAAM 226

[Close]

BLAST of Csor.00g027800 vs. ExPASy Swiss-Prot
Match: Q6GQD3 (RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 7.8e-05
Identity = 22/58 (37.93%), Postives = 34/58 (58.62%), Query Frame = 0


Query: 4  TKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRA 62
          TK++VGG+PY++T+  +   FE  G I E   +   ++GK RG   +     AAA+RA
Sbjct: 11 TKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERA 68

[Close]

BLAST of Csor.00g027800 vs. ExPASy Swiss-Prot
Match: Q9I8B3 (RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 7.8e-05
Identity = 22/58 (37.93%), Postives = 34/58 (58.62%), Query Frame = 0


Query: 4  TKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRA 62
          TK++VGG+PY++T+  +   FE  G I E   +   ++GK RG   +     AAA+RA
Sbjct: 11 TKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERA 68

[Close]

BLAST of Csor.00g027800 vs. ExPASy Swiss-Prot
Match: Q5ZMA3 (RNA-binding protein 24 OS=Gallus gallus OX=9031 GN=RBM24 PE=1 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 7.8e-05
Identity = 22/58 (37.93%), Postives = 34/58 (58.62%), Query Frame = 0


Query: 4  TKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRA 62
          TK++VGG+PY++T+  +   FE  G I E   +   ++GK RG   +     AAA+RA
Sbjct: 11 TKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERA 68

[Close]

BLAST of Csor.00g027800 vs. ExPASy Swiss-Prot
Match: Q6P8A7 (RNA-binding protein 24 OS=Xenopus tropicalis OX=8364 GN=rbm24 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 7.8e-05
Identity = 22/58 (37.93%), Postives = 34/58 (58.62%), Query Frame = 0


Query: 4  TKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRA 62
          TK++VGG+PY++T+  +   FE  G I E   +   ++GK RG   +     AAA+RA
Sbjct: 11 TKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERA 68

[Close]

BLAST of Csor.00g027800 vs. NCBI nr
Match: KAG6601013.1 (RNA-binding protein 24, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141 bits (356), Expect = 2.44e-42
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MVATKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKR 60
          MVATKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKR
Sbjct: 1  MVATKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKR 60

Query: 61 ALAMDGADM 69
          ALAMDGADM
Sbjct: 61 ALAMDGADM 69

[Close]

BLAST of Csor.00g027800 vs. NCBI nr
Match: XP_022139342.1 (protein gar2 [Momordica charantia])

HSP 1 Score: 132 bits (333), Expect = 5.73e-35
Identity = 65/68 (95.59%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 2   VATKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRA 61
           VATKVYVGGIPYYSTEDDI S FESCGTITEVDCMKFPESGKFRGIAIL FKTEAAAKRA
Sbjct: 179 VATKVYVGGIPYYSTEDDICSFFESCGTITEVDCMKFPESGKFRGIAILSFKTEAAAKRA 238

Query: 62  LAMDGADM 69
           LAMDGADM
Sbjct: 239 LAMDGADM 246

[Close]

BLAST of Csor.00g027800 vs. NCBI nr
Match: KAA0050286.1 (RNA-binding protein CP31B [Cucumis melo var. makuwa])

HSP 1 Score: 129 bits (323), Expect = 3.96e-34
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 2   VATKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRA 61
           +ATKVYVGGIPYYSTEDDI S FESCGTITE+DCMKFPESGKFRGIAIL FKTEAAAKRA
Sbjct: 99  LATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRA 158

Query: 62  LAMDGADM 69
           LA DGADM
Sbjct: 159 LACDGADM 166

[Close]

BLAST of Csor.00g027800 vs. NCBI nr
Match: XP_022943192.1 (protein gar2 [Cucurbita moschata])

HSP 1 Score: 130 bits (327), Expect = 5.25e-34
Identity = 64/68 (94.12%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 2   VATKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRA 61
           VATKVYVGGIPYYSTEDDI S FESCGTITEVDCM FPESGKFRGIAIL FKTEAAAKRA
Sbjct: 183 VATKVYVGGIPYYSTEDDICSFFESCGTITEVDCMMFPESGKFRGIAILSFKTEAAAKRA 242

Query: 62  LAMDGADM 69
           LAMDGADM
Sbjct: 243 LAMDGADM 250

[Close]

BLAST of Csor.00g027800 vs. NCBI nr
Match: KAG7030736.1 (hypothetical protein SDJN02_04773, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 130 bits (327), Expect = 5.32e-34
Identity = 64/68 (94.12%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 2   VATKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRA 61
           VATKVYVGGIPYYSTEDDI S FESCGTITEVDCM FPESGKFRGIAIL FKTEAAAKRA
Sbjct: 189 VATKVYVGGIPYYSTEDDICSFFESCGTITEVDCMMFPESGKFRGIAILSFKTEAAAKRA 248

Query: 62  LAMDGADM 69
           LAMDGADM
Sbjct: 249 LAMDGADM 256

[Close]

BLAST of Csor.00g027800 vs. ExPASy TrEMBL
Match: A0A6J1CDP4 (protein gar2 OS=Momordica charantia OX=3673 GN=LOC111010281 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 2.77e-35
Identity = 65/68 (95.59%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 2   VATKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRA 61
           VATKVYVGGIPYYSTEDDI S FESCGTITEVDCMKFPESGKFRGIAIL FKTEAAAKRA
Sbjct: 179 VATKVYVGGIPYYSTEDDICSFFESCGTITEVDCMKFPESGKFRGIAILSFKTEAAAKRA 238

Query: 62  LAMDGADM 69
           LAMDGADM
Sbjct: 239 LAMDGADM 246

[Close]

BLAST of Csor.00g027800 vs. ExPASy TrEMBL
Match: A0A5A7U7X8 (RNA-binding protein CP31B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold88G00050 PE=4 SV=1)

HSP 1 Score: 129 bits (323), Expect = 1.92e-34
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 2   VATKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRA 61
           +ATKVYVGGIPYYSTEDDI S FESCGTITE+DCMKFPESGKFRGIAIL FKTEAAAKRA
Sbjct: 99  LATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKFRGIAILSFKTEAAAKRA 158

Query: 62  LAMDGADM 69
           LA DGADM
Sbjct: 159 LACDGADM 166

[Close]

BLAST of Csor.00g027800 vs. ExPASy TrEMBL
Match: A0A6J1FSC3 (protein gar2 OS=Cucurbita moschata OX=3662 GN=LOC111447996 PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 2.54e-34
Identity = 64/68 (94.12%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 2   VATKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRA 61
           VATKVYVGGIPYYSTEDDI S FESCGTITEVDCM FPESGKFRGIAIL FKTEAAAKRA
Sbjct: 183 VATKVYVGGIPYYSTEDDICSFFESCGTITEVDCMMFPESGKFRGIAILSFKTEAAAKRA 242

Query: 62  LAMDGADM 69
           LAMDGADM
Sbjct: 243 LAMDGADM 250

[Close]

BLAST of Csor.00g027800 vs. ExPASy TrEMBL
Match: A0A6J1JA04 (protein gar2-like OS=Cucurbita maxima OX=3661 GN=LOC111483911 PE=4 SV=1)

HSP 1 Score: 130 bits (327), Expect = 2.65e-34
Identity = 64/68 (94.12%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 2   VATKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRA 61
           VATKVYVGGIPYYSTEDDI S FESCGTITEVDCM FPESGKFRGIAIL FKTEAAAKRA
Sbjct: 187 VATKVYVGGIPYYSTEDDICSFFESCGTITEVDCMMFPESGKFRGIAILSFKTEAAAKRA 246

Query: 62  LAMDGADM 69
           LAMDGADM
Sbjct: 247 LAMDGADM 254

[Close]

BLAST of Csor.00g027800 vs. ExPASy TrEMBL
Match: A0A5B7C1B3 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_044148 PE=4 SV=1)

HSP 1 Score: 127 bits (320), Expect = 5.74e-34
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 2   VATKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRA 61
           VATKVYVGGIPYYSTEDDI S F+SCGTITEVDCMKFPE+GKFRGIAI+ FKTEAAAKRA
Sbjct: 203 VATKVYVGGIPYYSTEDDIRSYFDSCGTITEVDCMKFPETGKFRGIAIISFKTEAAAKRA 262

Query: 62  LAMDGADM 69
           LA+DGADM
Sbjct: 263 LALDGADM 270

[Close]

BLAST of Csor.00g027800 vs. TAIR 10
Match: AT3G55340.1 (phragmoplastin interacting protein 1 )

HSP 1 Score: 84.3 bits (207), Expect = 4.1e-17
Identity = 42/69 (60.87%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 1   MVATKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKR 60
           +V  K+YVGGIPY STED+I S F SCG I +VDC   PE G F GIA + F TE  AKR
Sbjct: 158 VVPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGIAFITFDTEDGAKR 217

Query: 61  ALAMDGADM 70
           ALA D A M
Sbjct: 218 ALAFDRAAM 226

[Close]

BLAST of Csor.00g027800 vs. TAIR 10
Match: AT4G00830.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 46.6 bits (109), Expect = 9.4e-06
Identity = 23/59 (38.98%), Postives = 37/59 (62.71%), Query Frame = 0


Query: 4   TKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRAL 63
           ++V++GG+P    E+D+  L E  G I EV  MK  +SG  +G A + FKT+  A++A+
Sbjct: 116 SEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAI 174

[Close]

BLAST of Csor.00g027800 vs. TAIR 10
Match: AT4G00830.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 46.6 bits (109), Expect = 9.4e-06
Identity = 23/59 (38.98%), Postives = 37/59 (62.71%), Query Frame = 0


Query: 4   TKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRAL 63
           ++V++GG+P    E+D+  L E  G I EV  MK  +SG  +G A + FKT+  A++A+
Sbjct: 116 SEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAI 174

[Close]

BLAST of Csor.00g027800 vs. TAIR 10
Match: AT4G00830.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 46.6 bits (109), Expect = 9.4e-06
Identity = 23/59 (38.98%), Postives = 37/59 (62.71%), Query Frame = 0


Query: 4   TKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRAL 63
           ++V++GG+P    E+D+  L E  G I EV  MK  +SG  +G A + FKT+  A++A+
Sbjct: 96  SEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAI 154

[Close]

BLAST of Csor.00g027800 vs. TAIR 10
Match: AT4G00830.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 46.6 bits (109), Expect = 9.4e-06
Identity = 23/59 (38.98%), Postives = 37/59 (62.71%), Query Frame = 0


Query: 4   TKVYVGGIPYYSTEDDIFSLFESCGTITEVDCMKFPESGKFRGIAILIFKTEAAAKRAL 63
           ++V++GG+P    E+D+  L E  G I EV  MK  +SG  +G A + FKT+  A++A+
Sbjct: 116 SEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAI 174

The following BLAST results are available for this feature:

BLAST of Csor.00g027800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3B8	5.7e-16	60.87	Phragmoplastin interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=PHIP1 PE...	[more]
Q6GQD3	7.8e-05	37.93	RNA-binding protein 24-A OS=Xenopus laevis OX=8355 GN=rbm24-a PE=2 SV=1	[more]
Q9I8B3	7.8e-05	37.93	RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1	[more]
Q5ZMA3	7.8e-05	37.93	RNA-binding protein 24 OS=Gallus gallus OX=9031 GN=RBM24 PE=1 SV=2	[more]
Q6P8A7	7.8e-05	37.93	RNA-binding protein 24 OS=Xenopus tropicalis OX=8364 GN=rbm24 PE=2 SV=1	[more]

BLAST of Csor.00g027800 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601013.1	2.44e-42	100.00	RNA-binding protein 24, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022139342.1	5.73e-35	95.59	protein gar2 [Momordica charantia]	[more]
KAA0050286.1	3.96e-34	91.18	RNA-binding protein CP31B [Cucumis melo var. makuwa]	[more]
XP_022943192.1	5.25e-34	94.12	protein gar2 [Cucurbita moschata]	[more]
KAG7030736.1	5.32e-34	94.12	hypothetical protein SDJN02_04773, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Csor.00g027800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CDP4	2.77e-35	95.59	protein gar2 OS=Momordica charantia OX=3673 GN=LOC111010281 PE=4 SV=1	[more]
A0A5A7U7X8	1.92e-34	91.18	RNA-binding protein CP31B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A6J1FSC3	2.54e-34	94.12	protein gar2 OS=Cucurbita moschata OX=3662 GN=LOC111447996 PE=4 SV=1	[more]
A0A6J1JA04	2.65e-34	94.12	protein gar2-like OS=Cucurbita maxima OX=3661 GN=LOC111483911 PE=4 SV=1	[more]
A0A5B7C1B3	5.74e-34	89.71	Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_044148...	[more]

BLAST of Csor.00g027800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55340.1	4.1e-17	60.87	phragmoplastin interacting protein 1	[more]
AT4G00830.1	9.4e-06	38.98	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.2	9.4e-06	38.98	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.3	9.4e-06	38.98	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.4	9.4e-06	38.98	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 5..69 e-value: 8.2E-10 score: 48.6
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 6..67 e-value: 1.5E-13 score: 50.3
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 4..69 score: 13.566604
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 2..69 e-value: 6.3E-18 score: 67.1
None	No IPR available	PANTHER	PTHR23236	EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H	coord: 2..69
None	No IPR available	PANTHER	PTHR23236:SF24	PHRAGMOPLASTIN INTERACTING PROTEIN 1-RELATED	coord: 2..69
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g027800.m01	Csor.00g027800.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding