Csor.00g027540 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g027540
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RING-type E3 ubiquitin transferase
Location	Csor_Chr04: 6063039 .. 6064190 (+)
RNA-Seq Expression	Csor.00g027540
Synteny	Csor.00g027540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCGATGGCGGCGGCGTCTTCCTACTGGTGCTACCGATGCAGTCGCTTTGTTAGGGTTTTCAATCAAGACTCTGTTGTGTGCCCCGATTGTAATAGTGGGTTTATCGAACAGATCGAGCATCCTTCGAGGTTGGTGGACGTGGAATCGGCTCCGCGGAGGAGGTTTCCGGCTGCGGCGATGTATATGATTGGCCACCGGTCGAATTCGGGACAGAATTTGGGATCTGGGATTCGGAGACCTCGGAGGAATGGTGGGGATCGCTCGCCCTTTAATCCTGTGATTGTTCTTCGGGGGCCGTCTGATGGGAGTGAAGGTGGAGAAAGTCGTCGGTTTGAGCTTTATTACGATGATGGCGGTGGTTCTGGCCTGAGACCGCTGCCACCGAGCATGTCCGAGTTTTTGTTGGGGTCTGGGTTTGATAGGCTTCTGGAGCAACTTTCTCAGATTGAAATGAACGGTATTGGGCGGTTTGAGAGCCCACCGGCGTCCAAGGCTGCAATTGAGTCAATGCCCACGATTGAGATCTGTGAAAATCATTTGGAAACTGAGTCACACTGTGCTGTTTGCAAAGAAGCATTCGAATTGGGGACCGAAGCACGGGAGATGCCCTGTAAGCATATTTACCATTATGATTGCATTCTACCTTGGCTTTCGATTCGAAACTCTTGTCCAGTATGTCGTCATGAATTGCCTTCGGATAATCAGAACTCTCCGGATGCTGCAGAAAGTGGTGAAAATGAGGGGTCGGTGGCCTCAAATGGTGAAGAGAATGTGGGCTTAACCATTTGGAGGTTACCTGGCGGGGGGTTTGCGGTAGGGCGGTTTAATGGAGGTAGGAGAGGTGGGGAGAGAGAACTCCCGGTTGTTTACACTGAGGTGGACGGTGGTTTCACCAATGGTGGCGTCCCTAGAAGGATATCATTTGCTTCAAGAGGCAGAGGAAGGGAAAGAGGCGGATGGAGCCGAATAATTCGCAATATGTTTGCTTGCTTCAGGGGATCAATGAGGTCTATGTCATCTACTTCAAATTCCACCATCGATTCTAGTTCTTCAAGGAGTAGTAGACCACTCCCACATTTCACTACCGAGCCAAGGCGACGGCGCACATGGTCTATGGAAGTTAACAGTGGGACAATCAGCTGGTGA

mRNA sequence

ATGTCGTCGATGGCGGCGGCGTCTTCCTACTGGTGCTACCGATGCAGTCGCTTTGTTAGGGTTTTCAATCAAGACTCTGTTGTGTGCCCCGATTGTAATAGTGGGTTTATCGAACAGATCGAGCATCCTTCGAGGTTGGTGGACGTGGAATCGGCTCCGCGGAGGAGGTTTCCGGCTGCGGCGATGTATATGATTGGCCACCGGTCGAATTCGGGACAGAATTTGGGATCTGGGATTCGGAGACCTCGGAGGAATGGTGGGGATCGCTCGCCCTTTAATCCTGTGATTGTTCTTCGGGGGCCGTCTGATGGGAGTGAAGGTGGAGAAAGTCGTCGGTTTGAGCTTTATTACGATGATGGCGGTGGTTCTGGCCTGAGACCGCTGCCACCGAGCATGTCCGAGTTTTTGTTGGGGTCTGGGTTTGATAGGCTTCTGGAGCAACTTTCTCAGATTGAAATGAACGGTATTGGGCGGTTTGAGAGCCCACCGGCGTCCAAGGCTGCAATTGAGTCAATGCCCACGATTGAGATCTGTGAAAATCATTTGGAAACTGAGTCACACTGTGCTGTTTGCAAAGAAGCATTCGAATTGGGGACCGAAGCACGGGAGATGCCCTGTAAGCATATTTACCATTATGATTGCATTCTACCTTGGCTTTCGATTCGAAACTCTTGTCCAGTATGTCGTCATGAATTGCCTTCGGATAATCAGAACTCTCCGGATGCTGCAGAAAGTGGTGAAAATGAGGGGTCGGTGGCCTCAAATGGTGAAGAGAATGTGGGCTTAACCATTTGGAGGTTACCTGGCGGGGGGTTTGCGGTAGGGCGGTTTAATGGAGGTAGGAGAGGTGGGGAGAGAGAACTCCCGGTTGTTTACACTGAGGTGGACGGTGGTTTCACCAATGGTGGCGTCCCTAGAAGGATATCATTTGCTTCAAGAGGCAGAGGAAGGGAAAGAGGCGGATGGAGCCGAATAATTCGCAATATGTTTGCTTGCTTCAGGGGATCAATGAGGTCTATGTCATCTACTTCAAATTCCACCATCGATTCTAGTTCTTCAAGGAGTAGTAGACCACTCCCACATTTCACTACCGAGCCAAGGCGACGGCGCACATGGTCTATGGAAGTTAACAGTGGGACAATCAGCTGGTGA

Coding sequence (CDS)

ATGTCGTCGATGGCGGCGGCGTCTTCCTACTGGTGCTACCGATGCAGTCGCTTTGTTAGGGTTTTCAATCAAGACTCTGTTGTGTGCCCCGATTGTAATAGTGGGTTTATCGAACAGATCGAGCATCCTTCGAGGTTGGTGGACGTGGAATCGGCTCCGCGGAGGAGGTTTCCGGCTGCGGCGATGTATATGATTGGCCACCGGTCGAATTCGGGACAGAATTTGGGATCTGGGATTCGGAGACCTCGGAGGAATGGTGGGGATCGCTCGCCCTTTAATCCTGTGATTGTTCTTCGGGGGCCGTCTGATGGGAGTGAAGGTGGAGAAAGTCGTCGGTTTGAGCTTTATTACGATGATGGCGGTGGTTCTGGCCTGAGACCGCTGCCACCGAGCATGTCCGAGTTTTTGTTGGGGTCTGGGTTTGATAGGCTTCTGGAGCAACTTTCTCAGATTGAAATGAACGGTATTGGGCGGTTTGAGAGCCCACCGGCGTCCAAGGCTGCAATTGAGTCAATGCCCACGATTGAGATCTGTGAAAATCATTTGGAAACTGAGTCACACTGTGCTGTTTGCAAAGAAGCATTCGAATTGGGGACCGAAGCACGGGAGATGCCCTGTAAGCATATTTACCATTATGATTGCATTCTACCTTGGCTTTCGATTCGAAACTCTTGTCCAGTATGTCGTCATGAATTGCCTTCGGATAATCAGAACTCTCCGGATGCTGCAGAAAGTGGTGAAAATGAGGGGTCGGTGGCCTCAAATGGTGAAGAGAATGTGGGCTTAACCATTTGGAGGTTACCTGGCGGGGGGTTTGCGGTAGGGCGGTTTAATGGAGGTAGGAGAGGTGGGGAGAGAGAACTCCCGGTTGTTTACACTGAGGTGGACGGTGGTTTCACCAATGGTGGCGTCCCTAGAAGGATATCATTTGCTTCAAGAGGCAGAGGAAGGGAAAGAGGCGGATGGAGCCGAATAATTCGCAATATGTTTGCTTGCTTCAGGGGATCAATGAGGTCTATGTCATCTACTTCAAATTCCACCATCGATTCTAGTTCTTCAAGGAGTAGTAGACCACTCCCACATTTCACTACCGAGCCAAGGCGACGGCGCACATGGTCTATGGAAGTTAACAGTGGGACAATCAGCTGGTGA

Protein sequence

MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAAAMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICENHLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSPDAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFTNGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLPHFTTEPRRRRTWSMEVNSGTISW

Homology

[Close]

BLAST of Csor.00g027540 vs. ExPASy Swiss-Prot
Match: O22283 (Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RHC2A PE=2 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.0e-85
Identity = 198/404 (49.01%), Postives = 249/404 (61.63%), Query Frame = 0


Query: 6   AASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVES----------APRR 65
           A+ SYWCY CSRFV V   DS+ CPDC+ GF+E I+ P      +S          +P R
Sbjct: 2   ASGSYWCYSCSRFVWV--SDSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTR 61

Query: 66  RFPAAAMYMIGHRSNSGQNLGSG--IRRPRRNGGDRSPFNPVIVLRG----PSDG--SEG 125
             P ++       S    N  +   + R R N   RSP NPVIVLRG    PS    SEG
Sbjct: 62  FPPPSSSSSTPSASMHADNSPTPTIVTRTRSN---RSP-NPVIVLRGSAAAPSSDVVSEG 121

Query: 126 GESRRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN---GIGRFESPPA 185
            +   F++YYDDG  SGLRPLPPSM+EFLLGSGFDRLL+Q+SQIE+N    +   E PPA
Sbjct: 122 LDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPA 181

Query: 186 SKAAIESMPTIEICENHL--ETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIR 245
           SK+AIE++P IEI   HL  +++SHCAVCKE F L + AREMPC HIYH DCILPWL+IR
Sbjct: 182 SKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIR 241

Query: 246 NSCPVCRHELPSDNQNSPDAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRR 305
           NSCPVCRHELP+++      A       +     +   GLTIWRLPGGGFAVGR  GG R
Sbjct: 242 NSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWR 301

Query: 306 GGERELPVVYTEVDGG-FTNGGVPRRISFASR------GRGRER-GGWSRIIRNMFACFR 365
           GG+R +PVVYTEVDGG   +  +PRR+++ SR      G  RER GG++  I  +F CF 
Sbjct: 302 GGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLFGCFS 361

Query: 366 GSMRSMSSTSNSTIDSSS----SRSSRPLPHFTT--EPRRRRTW 373
           GS  S+++ + ++  S S    +R +R    F+T     RRR W
Sbjct: 362 GSSGSIAAAAAASSGSGSRIRVTRRTRSFSMFSTASSSSRRRNW 399

[Close]

BLAST of Csor.00g027540 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 3.9e-82
Identity = 197/392 (50.26%), Postives = 235/392 (59.95%), Query Frame = 0


Query: 8   SSYWCYRCSRFVRVF-NQDS---VVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAAAMY 67
           +SYWCY C+RF+ V+ +QD+   V+CP CN GFIE+IE  S      +A     P     
Sbjct: 29  TSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSN--STVAAIPASTPEVRSV 88

Query: 68  MIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEG------------GESR 127
              HRS         IRR R N   R+ FNPVIVL G   G  G             E R
Sbjct: 89  EETHRSI--------IRRRRSN--RRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERR 148

Query: 128 RFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEM--NGIGRFESPPASKAAI 187
            +E YYDDG GSGLRPLP S+SE L+GSGF+RLLEQLSQIE   NGIGR  +PPASK+AI
Sbjct: 149 AYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAI 208

Query: 188 ESMPTIEICENHLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCR 247
           ES+P +EI + H + E++CAVC E FE G E REMPCKHI+H DCI+PWLSIRNSCPVCR
Sbjct: 209 ESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 268

Query: 248 HELPSDNQNSPDAAESGENEGSVASNGEEN-VGLTIWRLPGGGFAVGRFNGGRRGGEREL 307
            ELPSD                  SN EE+ VG+TIWRLPGGGFAVGRFN G R GER L
Sbjct: 269 FELPSDPIQ--------------RSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREGERIL 328

Query: 308 PVVYTEVDGG--FTNGGVPRRISFA--------SRGRGRERGG--WSRIIRNMFACFRGS 367
           PVV TE+DGG   +N G PRRIS+         SR  GR   G    R +R M +  R  
Sbjct: 329 PVVLTEMDGGGLGSNEG-PRRISWVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRV 388

Query: 368 MRSMSSTSNSTIDSSSSRSSRPLPHFTTEPRR 369
             S  S++++ ID  S   +R +   T+  RR
Sbjct: 389 RPSRGSSNSNVIDLDSDGETRVMNRSTSLIRR 393

[Close]

BLAST of Csor.00g027540 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 4.4e-81
Identity = 188/376 (50.00%), Postives = 227/376 (60.37%), Query Frame = 0


Query: 8   SSYWCYRCSRFVRVFNQD------SVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAAA 67
           +SYWCY C+RFV V+         SV CP C+ GFIEQI   S      +A     PA+ 
Sbjct: 16  ASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSS-----SAATELTIPAST 75

Query: 68  MYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGES-------RRFE 127
                   +   N  S IR  RR  G R  FNPVIVL+G +   E GE        R FE
Sbjct: 76  -----EVRSINNNRRSVIR--RRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFE 135

Query: 128 LYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN--GIGRFESPPASKAAIESM 187
            YYDDG GSGLRPLP S+SE L+GSGF+RLLEQLSQIE +  GIGR  +PPASK+AIES+
Sbjct: 136 FYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESL 195

Query: 188 PTIEICENHLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHEL 247
           P +EI + H+ +E++CAVC E FE  TEAREMPCKH++H DCI+PWLSIRNSCPVCR EL
Sbjct: 196 PRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFEL 255

Query: 248 PSDNQNSPDAAESGENEGSVASNGEEN-VGLTIWRLPGGGFAVGRFNGGRRGGERELPVV 307
           PS+     +            +N E+N VG+TIWRLPGGGFAVGRFN   R GER LPVV
Sbjct: 256 PSEPNRRSN------------NNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVV 315

Query: 308 YTEVDGGFTNGGV--PRRISFA---------SRGRGRERGGWSRI---IRNMFACFRGSM 354
            TE+DGG        PRRIS+          S G G   G   R+   +R M +  R   
Sbjct: 316 LTEMDGGGIGNSQDGPRRISWVRSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRVR 367

[Close]

BLAST of Csor.00g027540 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.0e-34
Identity = 90/279 (32.26%), Postives = 150/279 (53.76%), Query Frame = 0


Query: 10  YWCYRCSRFVRVF---NQDSVVCPDCNSGFIEQIEHPS-------RLVDVESAPRRRF-- 69
           ++CY+C+R V V          CP CN GF+E+ ++P+          +  S P      
Sbjct: 23  FFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHDLFL 82

Query: 70  ----PAAAMYMIGHRSNSGQNLGS---------GIRRPRRNG-GDRSPFNPVIVLRGPSD 129
               P A++  +   S+S     S          +  P R+G GD   F+P   ++   +
Sbjct: 83  TLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGRGDPFAFDPFTFIQNHLN 142

Query: 130 GSEGGESRRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPP 189
                 ++   +  ++    G R LP ++ ++ +G G ++L++QL++ + N   R+ +PP
Sbjct: 143 DLRSSGAQIEFVIQNNPSDQGFR-LPANIGDYFIGPGLEQLIQQLAENDPN---RYGTPP 202

Query: 190 ASKAAIESMPTIEICENHLETE-SHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIR 249
           ASK+AIE++P + I +++L +E + CAVC + FE GTEA++MPCKH+YH DC+LPWL + 
Sbjct: 203 ASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELH 262

Query: 250 NSCPVCRHELPSDNQNSPDAAESGENEGSVASNGEENVG 262
           NSCPVCRHELP+D+ +          +G+   N  +N G
Sbjct: 263 NSCPVCRHELPTDDPDYERRVRGA--QGTSGGNDGDNSG 295

[Close]

BLAST of Csor.00g027540 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.4e-33
Identity = 96/261 (36.78%), Postives = 144/261 (55.17%), Query Frame = 0


Query: 8   SSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIE-HPSRL-VDVESAP----RRRFPAAA 67
           +++WC+RC R V +  +D+ VC  C  GF+E+I+  PSR   DVE  P       F A  
Sbjct: 6   NTHWCHRCQRAVWLRARDA-VCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFM 65

Query: 68  MYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSD-GSEGGESRRFELYYDDG 127
              +  RS   +  G   R         S   P+++  G +     GG++   E + +  
Sbjct: 66  RSRLAERSYDREISG---RLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSVEAFVNGA 125

Query: 128 G-GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICE 187
             G G+     +  ++  G G + L+EQLS    +G      PPA K++I+++PTI+I +
Sbjct: 126 APGIGI-ARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALPTIKITQ 185

Query: 188 NHLE-TESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQN 247
            HL+ ++SHC VCK+ FEL +EA++MPC HIYH DCI+PWL   NSCPVCR ELPS  + 
Sbjct: 186 KHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPS--RG 245

Query: 248 SPDAAESGENEGSVASNGEEN 260
           S  + +S +N    ++NG EN
Sbjct: 246 SSSSTQSSQNR---STNGREN 252

[Close]

BLAST of Csor.00g027540 vs. NCBI nr
Match: KAG6600987.1 (putative E3 ubiquitin-protein ligase RHC2A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 780 bits (2014), Expect = 9.05e-285
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60
           MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60

Query: 61  AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180

Query: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240
           HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP
Sbjct: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300
           DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP 360
           NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP
Sbjct: 301 NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP 360

Query: 361 HFTTEPRRRRTWSMEVNSGTISW 383
           HFTTEPRRRRTWSMEVNSGTISW
Sbjct: 361 HFTTEPRRRRTWSMEVNSGTISW 383

[Close]

BLAST of Csor.00g027540 vs. NCBI nr
Match: XP_022987501.1 (probable E3 ubiquitin-protein ligase RHC2A [Cucurbita maxima])

HSP 1 Score: 778 bits (2009), Expect = 5.24e-284
Identity = 381/383 (99.48%), Postives = 382/383 (99.74%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60
           MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60

Query: 61  AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180

Query: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240
           HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP
Sbjct: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300
           DAAESGENEGSVASNGEENVGLT+WRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENEGSVASNGEENVGLTVWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP 360
           NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDS SSRSSRPLP
Sbjct: 301 NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSGSSRSSRPLP 360

Query: 361 HFTTEPRRRRTWSMEVNSGTISW 383
           HFTTEPRRRRTWSMEVNSGTISW
Sbjct: 361 HFTTEPRRRRTWSMEVNSGTISW 383

[Close]

BLAST of Csor.00g027540 vs. NCBI nr
Match: KAG7031600.1 (putative E3 ubiquitin-protein ligase RHC2A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 775 bits (2001), Expect = 7.75e-283
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 4   MAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAAAMY 63
           MAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAAAMY
Sbjct: 1   MAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAAAMY 60

Query: 64  MIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDGGGS 123
           MIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDGGGS
Sbjct: 61  MIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDGGGS 120

Query: 124 GLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICENHLE 183
           GLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICENHLE
Sbjct: 121 GLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICENHLE 180

Query: 184 TESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSPDAA 243
           TESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSPDAA
Sbjct: 181 TESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSPDAA 240

Query: 244 ESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFTNGG 303
           ESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFTNGG
Sbjct: 241 ESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFTNGG 300

Query: 304 VPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLPHFT 363
           VPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLPHFT
Sbjct: 301 VPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLPHFT 360

Query: 364 TEPRRRRTWSMEVNSGTISW 383
           TEPRRRRTWSMEVNSGTISW
Sbjct: 361 TEPRRRRTWSMEVNSGTISW 380

[Close]

BLAST of Csor.00g027540 vs. NCBI nr
Match: XP_022957087.1 (probable E3 ubiquitin-protein ligase RHC2A [Cucurbita moschata])

HSP 1 Score: 775 bits (2001), Expect = 8.68e-283
Identity = 381/383 (99.48%), Postives = 381/383 (99.48%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60
           MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60

Query: 61  AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSG NLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGPNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180

Query: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240
           HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP
Sbjct: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300
           DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP 360
           NGGVPRRISFASRGRGRERGGWSRII NMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP
Sbjct: 301 NGGVPRRISFASRGRGRERGGWSRIIGNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP 360

Query: 361 HFTTEPRRRRTWSMEVNSGTISW 383
           HFTTEPRRRRTWSMEVNSGTISW
Sbjct: 361 HFTTEPRRRRTWSMEVNSGTISW 383

[Close]

BLAST of Csor.00g027540 vs. NCBI nr
Match: XP_023545680.1 (probable E3 ubiquitin-protein ligase RHC2A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 771 bits (1991), Expect = 2.90e-281
Identity = 378/383 (98.69%), Postives = 380/383 (99.22%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60
           MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIE PSRLVDVESAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEQPSRLVDVESAPRRRFPAA 60

Query: 61  AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSG NLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGHNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180

Query: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240
           HLE ESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP
Sbjct: 181 HLEIESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300
           DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP 360
           NGG+PRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP
Sbjct: 301 NGGIPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP 360

Query: 361 HFTTEPRRRRTWSMEVNSGTISW 383
           HFTTEPRRRRTWSM+VNSGTISW
Sbjct: 361 HFTTEPRRRRTWSMDVNSGTISW 383

[Close]

BLAST of Csor.00g027540 vs. ExPASy TrEMBL
Match: A0A6J1JEE7 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111485043 PE=4 SV=1)

HSP 1 Score: 778 bits (2009), Expect = 2.54e-284
Identity = 381/383 (99.48%), Postives = 382/383 (99.74%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60
           MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60

Query: 61  AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180

Query: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240
           HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP
Sbjct: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300
           DAAESGENEGSVASNGEENVGLT+WRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENEGSVASNGEENVGLTVWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP 360
           NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDS SSRSSRPLP
Sbjct: 301 NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSGSSRSSRPLP 360

Query: 361 HFTTEPRRRRTWSMEVNSGTISW 383
           HFTTEPRRRRTWSMEVNSGTISW
Sbjct: 361 HFTTEPRRRRTWSMEVNSGTISW 383

[Close]

BLAST of Csor.00g027540 vs. ExPASy TrEMBL
Match: A0A6J1GY71 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111458574 PE=4 SV=1)

HSP 1 Score: 775 bits (2001), Expect = 4.20e-283
Identity = 381/383 (99.48%), Postives = 381/383 (99.48%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60
           MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60

Query: 61  AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSG NLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGPNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180

Query: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240
           HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP
Sbjct: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300
           DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP 360
           NGGVPRRISFASRGRGRERGGWSRII NMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP
Sbjct: 301 NGGVPRRISFASRGRGRERGGWSRIIGNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP 360

Query: 361 HFTTEPRRRRTWSMEVNSGTISW 383
           HFTTEPRRRRTWSMEVNSGTISW
Sbjct: 361 HFTTEPRRRRTWSMEVNSGTISW 383

[Close]

BLAST of Csor.00g027540 vs. ExPASy TrEMBL
Match: A0A6J1CAT7 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111009972 PE=4 SV=1)

HSP 1 Score: 728 bits (1879), Expect = 1.66e-264
Identity = 354/383 (92.43%), Postives = 368/383 (96.08%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60
           MSSMAAASSYWCYRCSRFVRV NQDSVVCPDCNSGF+EQIEHPSRLV+VE+APRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSRFVRVSNQDSVVCPDCNSGFVEQIEHPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120
           AMYMIGHRSNSGQNLGSG+RR RRNGGDRS FNPVIVLRGPSDGSEGGESRRFELYYDDG
Sbjct: 61  AMYMIGHRSNSGQNLGSGLRRSRRNGGDRSQFNPVIVLRGPSDGSEGGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFE+PPASKAAIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240
           HLETESHCAVCKEAFELG EAREMPCKHIYH DCILPWLSIRNSCPVCRHELPSDNQNSP
Sbjct: 181 HLETESHCAVCKEAFELGNEAREMPCKHIYHSDCILPWLSIRNSCPVCRHELPSDNQNSP 240

Query: 241 DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300
           DAAESGEN G V SNGEENVGLTIWRLPGGGFAVGRF+GGRRGGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENGGPVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP 360
           NGGVPRR+SFASRGRGRERGGWSRI+RN+FACF GSMRS +STS+S  DS  SRSSRPLP
Sbjct: 301 NGGVPRRVSFASRGRGRERGGWSRILRNLFACFGGSMRSTASTSSSPTDSGPSRSSRPLP 360

Query: 361 HFTTEPRRRRTWSMEVNSGTISW 383
           HF TEPR+RRTWSMEVNSGT+SW
Sbjct: 361 HFNTEPRQRRTWSMEVNSGTMSW 383

[Close]

BLAST of Csor.00g027540 vs. ExPASy TrEMBL
Match: A0A5A7UA14 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00480 PE=4 SV=1)

HSP 1 Score: 720 bits (1858), Expect = 2.63e-261
Identity = 351/383 (91.64%), Postives = 366/383 (95.56%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60
           MSSMAAASSYWCYRCS FVRV NQDSVVCPDCNSGF+EQIE PSRLV+VE+APRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120
           AMYMIG+RSNSGQNLGSG+RR RRNGGDRSPFNPVIVLRGPSDGSE GESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFE+PPASKAAIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240
           HL TESHCAVCKEAFELG EAREMPCKHIYH DCILPWLS+RNSCPVCRHELPSDNQNS 
Sbjct: 181 HLATESHCAVCKEAFELGNEAREMPCKHIYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300
           DAAESGEN GSV SNGEENVGLTIWRLPGGGFAVGRF+GGRRGGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP 360
           NGG+PRR+SFASRGRGRERGGW R+IRNMFACF GSMRS++STSNST DS  SRSSRPLP
Sbjct: 301 NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360

Query: 361 HFTTEPRRRRTWSMEVNSGTISW 383
           HF +EPRRRRTWSMEVNSGTISW
Sbjct: 361 HFNSEPRRRRTWSMEVNSGTISW 383

[Close]

BLAST of Csor.00g027540 vs. ExPASy TrEMBL
Match: A0A1S3CGL6 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103500230 PE=4 SV=1)

HSP 1 Score: 720 bits (1858), Expect = 2.63e-261
Identity = 351/383 (91.64%), Postives = 366/383 (95.56%), Query Frame = 0


Query: 1   MSSMAAASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAA 60
           MSSMAAASSYWCYRCS FVRV NQDSVVCPDCNSGF+EQIE PSRLV+VE+APRRRFPAA
Sbjct: 1   MSSMAAASSYWCYRCSHFVRVSNQDSVVCPDCNSGFVEQIEQPSRLVNVEAAPRRRFPAA 60

Query: 61  AMYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGESRRFELYYDDG 120
           AMYMIG+RSNSGQNLGSG+RR RRNGGDRSPFNPVIVLRGPSDGSE GESRRFELYYDDG
Sbjct: 61  AMYMIGNRSNSGQNLGSGLRRSRRNGGDRSPFNPVIVLRGPSDGSEAGESRRFELYYDDG 120

Query: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICEN 180
           GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFE+PPASKAAIESMPTI+ICEN
Sbjct: 121 GGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENPPASKAAIESMPTIQICEN 180

Query: 181 HLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQNSP 240
           HL TESHCAVCKEAFELG EAREMPCKHIYH DCILPWLS+RNSCPVCRHELPSDNQNS 
Sbjct: 181 HLATESHCAVCKEAFELGNEAREMPCKHIYHCDCILPWLSLRNSCPVCRHELPSDNQNSL 240

Query: 241 DAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRRGGERELPVVYTEVDGGFT 300
           DAAESGEN GSV SNGEENVGLTIWRLPGGGFAVGRF+GGRRGGERELPVVYTEVDGGFT
Sbjct: 241 DAAESGENGGSVTSNGEENVGLTIWRLPGGGFAVGRFHGGRRGGERELPVVYTEVDGGFT 300

Query: 301 NGGVPRRISFASRGRGRERGGWSRIIRNMFACFRGSMRSMSSTSNSTIDSSSSRSSRPLP 360
           NGG+PRR+SFASRGRGRERGGW R+IRNMFACF GSMRS++STSNST DS  SRSSRPLP
Sbjct: 301 NGGLPRRVSFASRGRGRERGGWGRMIRNMFACFGGSMRSIASTSNSTSDSGPSRSSRPLP 360

Query: 361 HFTTEPRRRRTWSMEVNSGTISW 383
           HF +EPRRRRTWSMEVNSGTISW
Sbjct: 361 HFNSEPRRRRTWSMEVNSGTISW 383

[Close]

BLAST of Csor.00g027540 vs. TAIR 10
Match: AT2G39720.1 (RING-H2 finger C2A )

HSP 1 Score: 318.5 bits (815), Expect = 7.1e-87
Identity = 198/404 (49.01%), Postives = 249/404 (61.63%), Query Frame = 0


Query: 6   AASSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIEHPSRLVDVES----------APRR 65
           A+ SYWCY CSRFV V   DS+ CPDC+ GF+E I+ P      +S          +P R
Sbjct: 2   ASGSYWCYSCSRFVWV--SDSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQHRSPTR 61

Query: 66  RFPAAAMYMIGHRSNSGQNLGSG--IRRPRRNGGDRSPFNPVIVLRG----PSDG--SEG 125
             P ++       S    N  +   + R R N   RSP NPVIVLRG    PS    SEG
Sbjct: 62  FPPPSSSSSTPSASMHADNSPTPTIVTRTRSN---RSP-NPVIVLRGSAAAPSSDVVSEG 121

Query: 126 GESRRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN---GIGRFESPPA 185
            +   F++YYDDG  SGLRPLPPSM+EFLLGSGFDRLL+Q+SQIE+N    +   E PPA
Sbjct: 122 LDRSAFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPA 181

Query: 186 SKAAIESMPTIEICENHL--ETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIR 245
           SK+AIE++P IEI   HL  +++SHCAVCKE F L + AREMPC HIYH DCILPWL+IR
Sbjct: 182 SKSAIEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIR 241

Query: 246 NSCPVCRHELPSDNQNSPDAAESGENEGSVASNGEENVGLTIWRLPGGGFAVGRFNGGRR 305
           NSCPVCRHELP+++      A       +     +   GLTIWRLPGGGFAVGR  GG R
Sbjct: 242 NSCPVCRHELPAEDLTDGTGAALTAVTATAEEEEDSAAGLTIWRLPGGGFAVGRIPGGWR 301

Query: 306 GGERELPVVYTEVDGG-FTNGGVPRRISFASR------GRGRER-GGWSRIIRNMFACFR 365
           GG+R +PVVYTEVDGG   +  +PRR+++ SR      G  RER GG++  I  +F CF 
Sbjct: 302 GGDRMMPVVYTEVDGGRLGDERLPRRVAWGSRRGGRDGGGSRERGGGFAGRIMRLFGCFS 361

Query: 366 GSMRSMSSTSNSTIDSSS----SRSSRPLPHFTT--EPRRRRTW 373
           GS  S+++ + ++  S S    +R +R    F+T     RRR W
Sbjct: 362 GSSGSIAAAAAASSGSGSRIRVTRRTRSFSMFSTASSSSRRRNW 399

[Close]

BLAST of Csor.00g027540 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 306.6 bits (784), Expect = 2.8e-83
Identity = 197/392 (50.26%), Postives = 235/392 (59.95%), Query Frame = 0


Query: 8   SSYWCYRCSRFVRVF-NQDS---VVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAAAMY 67
           +SYWCY C+RF+ V+ +QD+   V+CP CN GFIE+IE  S      +A     P     
Sbjct: 29  TSYWCYSCTRFISVWEDQDANAGVLCPYCNGGFIEEIEDSSN--STVAAIPASTPEVRSV 88

Query: 68  MIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEG------------GESR 127
              HRS         IRR R N   R+ FNPVIVL G   G  G             E R
Sbjct: 89  EETHRSI--------IRRRRSN--RRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERR 148

Query: 128 RFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEM--NGIGRFESPPASKAAI 187
            +E YYDDG GSGLRPLP S+SE L+GSGF+RLLEQLSQIE   NGIGR  +PPASK+AI
Sbjct: 149 AYEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASGNGIGRSGNPPASKSAI 208

Query: 188 ESMPTIEICENHLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCR 247
           ES+P +EI + H + E++CAVC E FE G E REMPCKHI+H DCI+PWLSIRNSCPVCR
Sbjct: 209 ESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCR 268

Query: 248 HELPSDNQNSPDAAESGENEGSVASNGEEN-VGLTIWRLPGGGFAVGRFNGGRRGGEREL 307
            ELPSD                  SN EE+ VG+TIWRLPGGGFAVGRFN G R GER L
Sbjct: 269 FELPSDPIQ--------------RSNEEEHAVGMTIWRLPGGGFAVGRFNAGVREGERIL 328

Query: 308 PVVYTEVDGG--FTNGGVPRRISFA--------SRGRGRERGG--WSRIIRNMFACFRGS 367
           PVV TE+DGG   +N G PRRIS+         SR  GR   G    R +R M +  R  
Sbjct: 329 PVVLTEMDGGGLGSNEG-PRRISWVRAHETPEMSRNGGRSGNGGRLRRAVRGMVSFMRRV 388

Query: 368 MRSMSSTSNSTIDSSSSRSSRPLPHFTTEPRR 369
             S  S++++ ID  S   +R +   T+  RR
Sbjct: 389 RPSRGSSNSNVIDLDSDGETRVMNRSTSLIRR 393

[Close]

BLAST of Csor.00g027540 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 303.1 bits (775), Expect = 3.1e-82
Identity = 188/376 (50.00%), Postives = 227/376 (60.37%), Query Frame = 0


Query: 8   SSYWCYRCSRFVRVFNQD------SVVCPDCNSGFIEQIEHPSRLVDVESAPRRRFPAAA 67
           +SYWCY C+RFV V+         SV CP C+ GFIEQI   S      +A     PA+ 
Sbjct: 16  ASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSS-----SAATELTIPAST 75

Query: 68  MYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSDGSEGGES-------RRFE 127
                   +   N  S IR  RR  G R  FNPVIVL+G +   E GE        R FE
Sbjct: 76  -----EVRSINNNRRSVIR--RRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRRAFE 135

Query: 128 LYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMN--GIGRFESPPASKAAIESM 187
            YYDDG GSGLRPLP S+SE L+GSGF+RLLEQLSQIE +  GIGR  +PPASK+AIES+
Sbjct: 136 FYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESL 195

Query: 188 PTIEICENHLETESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHEL 247
           P +EI + H+ +E++CAVC E FE  TEAREMPCKH++H DCI+PWLSIRNSCPVCR EL
Sbjct: 196 PRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFEL 255

Query: 248 PSDNQNSPDAAESGENEGSVASNGEEN-VGLTIWRLPGGGFAVGRFNGGRRGGERELPVV 307
           PS+     +            +N E+N VG+TIWRLPGGGFAVGRFN   R GER LPVV
Sbjct: 256 PSEPNRRSN------------NNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVV 315

Query: 308 YTEVDGGFTNGGV--PRRISFA---------SRGRGRERGGWSRI---IRNMFACFRGSM 354
            TE+DGG        PRRIS+          S G G   G   R+   +R M +  R   
Sbjct: 316 LTEMDGGGIGNSQDGPRRISWVRSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRVR 367

[Close]

BLAST of Csor.00g027540 vs. TAIR 10
Match: AT3G56580.2 (RING/U-box superfamily protein )

HSP 1 Score: 143.7 bits (361), Expect = 3.1e-34
Identity = 96/261 (36.78%), Postives = 144/261 (55.17%), Query Frame = 0


Query: 8   SSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIE-HPSRL-VDVESAP----RRRFPAAA 67
           +++WC+RC R V +  +D+ VC  C  GF+E+I+  PSR   DVE  P       F A  
Sbjct: 6   NTHWCHRCQRAVWLRARDA-VCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFM 65

Query: 68  MYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSD-GSEGGESRRFELYYDDG 127
              +  RS   +  G   R         S   P+++  G +     GG++   E + +  
Sbjct: 66  RSRLAERSYDREISG---RLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSVEAFVNGA 125

Query: 128 G-GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICE 187
             G G+     +  ++  G G + L+EQLS    +G      PPA K++I+++PTI+I +
Sbjct: 126 APGIGI-ARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALPTIKITQ 185

Query: 188 NHLE-TESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQN 247
            HL+ ++SHC VCK+ FEL +EA++MPC HIYH DCI+PWL   NSCPVCR ELPS  + 
Sbjct: 186 KHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPS--RG 245

Query: 248 SPDAAESGENEGSVASNGEEN 260
           S  + +S +N    ++NG EN
Sbjct: 246 SSSSTQSSQNR---STNGREN 252

[Close]

BLAST of Csor.00g027540 vs. TAIR 10
Match: AT3G56580.1 (RING/U-box superfamily protein )

HSP 1 Score: 143.7 bits (361), Expect = 3.1e-34
Identity = 96/261 (36.78%), Postives = 144/261 (55.17%), Query Frame = 0


Query: 8   SSYWCYRCSRFVRVFNQDSVVCPDCNSGFIEQIE-HPSRL-VDVESAP----RRRFPAAA 67
           +++WC+RC R V +  +D+ VC  C  GF+E+I+  PSR   DVE  P       F A  
Sbjct: 6   NTHWCHRCQRAVWLRARDA-VCSYCGGGFVEEIDIGPSRAHRDVERDPTFDLMEAFSAFM 65

Query: 68  MYMIGHRSNSGQNLGSGIRRPRRNGGDRSPFNPVIVLRGPSD-GSEGGESRRFELYYDDG 127
              +  RS   +  G   R         S   P+++  G +     GG++   E + +  
Sbjct: 66  RSRLAERSYDREISG---RLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSSVEAFVNGA 125

Query: 128 G-GSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFESPPASKAAIESMPTIEICE 187
             G G+     +  ++  G G + L+EQLS    +G      PPA K++I+++PTI+I +
Sbjct: 126 APGIGI-ARGTNAGDYFFGPGLEELIEQLS----SGTHHRGPPPAPKSSIDALPTIKITQ 185

Query: 188 NHLE-TESHCAVCKEAFELGTEAREMPCKHIYHYDCILPWLSIRNSCPVCRHELPSDNQN 247
            HL+ ++SHC VCK+ FEL +EA++MPC HIYH DCI+PWL   NSCPVCR ELPS  + 
Sbjct: 186 KHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPS--RG 245

Query: 248 SPDAAESGENEGSVASNGEEN 260
           S  + +S +N    ++NG EN
Sbjct: 246 SSSSTQSSQNR---STNGREN 252

The following BLAST results are available for this feature:

BLAST of Csor.00g027540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22283	1.0e-85	49.01	Probable E3 ubiquitin-protein ligase RHC2A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q9SNB6	3.9e-82	50.26	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
Q940T5	4.4e-81	50.00	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]
P0CH30	4.0e-34	32.26	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q94AK4	4.4e-33	36.78	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]

BLAST of Csor.00g027540 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600987.1	9.05e-285	100.00	putative E3 ubiquitin-protein ligase RHC2A, partial [Cucurbita argyrosperma subs...	[more]
XP_022987501.1	5.24e-284	99.48	probable E3 ubiquitin-protein ligase RHC2A [Cucurbita maxima]	[more]
KAG7031600.1	7.75e-283	100.00	putative E3 ubiquitin-protein ligase RHC2A, partial [Cucurbita argyrosperma subs...	[more]
XP_022957087.1	8.68e-283	99.48	probable E3 ubiquitin-protein ligase RHC2A [Cucurbita moschata]	[more]
XP_023545680.1	2.90e-281	98.69	probable E3 ubiquitin-protein ligase RHC2A [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g027540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JEE7	2.54e-284	99.48	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111485043 P...	[more]
A0A6J1GY71	4.20e-283	99.48	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111458574...	[more]
A0A6J1CAT7	1.66e-264	92.43	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11100997...	[more]
A0A5A7UA14	2.63e-261	91.64	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CGL6	2.63e-261	91.64	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103500230 PE=4 ...	[more]

BLAST of Csor.00g027540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39720.1	7.1e-87	49.01	RING-H2 finger C2A	[more]
AT3G46620.1	2.8e-83	50.26	zinc finger (C3HC4-type RING finger) family protein	[more]
AT5G59550.1	3.1e-82	50.00	zinc finger (C3HC4-type RING finger) family protein	[more]
AT3G56580.2	3.1e-34	36.78	RING/U-box superfamily protein	[more]
AT3G56580.1	3.1e-34	36.78	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 188..228 e-value: 6.7E-8 score: 42.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 187..229 e-value: 6.9E-11 score: 42.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 188..229 score: 12.208971
IPR010543	Domain of unknown function DUF1117	PFAM	PF06547	DUF1117	coord: 260..357 e-value: 7.1E-37 score: 126.4
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 154..235 e-value: 1.8E-20 score: 74.4
IPR039525	E3 ubiquitin-protein ligase RNF126-like, zinc-ribbon	PFAM	PF14369	zinc_ribbon_9	coord: 9..40 e-value: 1.1E-12 score: 48.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 339..383
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 339..360
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 6..331
None	No IPR available	PANTHER	PTHR15710:SF112	E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE PROTEIN	coord: 6..331
None	No IPR available	CDD	cd16667	RING-H2_RNF126_like	coord: 188..229 e-value: 2.76362E-22 score: 86.6028
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 168..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g027540.m01	Csor.00g027540.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity