Csor.00g027290 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g027290
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	17.8 kDa class I heat shock protein-like
Location	Csor_Chr04: 5942170 .. 5942637 (+)
RNA-Seq Expression	Csor.00g027290
Synteny	Csor.00g027290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTGATTCCCAGCATTTTCGGTGGCCGCCGGAGCAACATCTTCGACCCCTTCTCATTGGACGCTTGGGATCCATTCCAAGGCTTCTCACTGGCTAACGTGCCTTCCTCCGCCCAGGAGGCCTCTGCTTTTGCCAACACTCGCATCGACTGGAAGGAGACACCGCAAGCCCATATCTTCACAGCCGATCTCCCTGGGATCAACAAAGACCAACTCAAAGTTGAGGTTGAAGAAGGCAGAGTTTTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAGGAGAAGAATGAGAAATGGCATAGAATTGAGCGGAGCAGTGGGAAGTTCATGAGGAGATTTAGGCTCCCAGAAGATGCCAAAGTTGAGGAGGTGAAGGCCAGAATGGAGAACGGAGTTCTTACTGTGACAGTACCGAAAGTGGAAGCGAAGAAGCCTGAAATCAAGTCCATTGAAATCTCTGCTTGA

mRNA sequence

ATGGCTCTGATTCCCAGCATTTTCGGTGGCCGCCGGAGCAACATCTTCGACCCCTTCTCATTGGACGCTTGGGATCCATTCCAAGGCTTCTCACTGGCTAACGTGCCTTCCTCCGCCCAGGAGGCCTCTGCTTTTGCCAACACTCGCATCGACTGGAAGGAGACACCGCAAGCCCATATCTTCACAGCCGATCTCCCTGGGATCAACAAAGACCAACTCAAAGTTGAGGTTGAAGAAGGCAGAGTTTTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAGGAGAAGAATGAGAAATGGCATAGAATTGAGCGGAGCAGTGGGAAGTTCATGAGGAGATTTAGGCTCCCAGAAGATGCCAAAGTTGAGGAGGTGAAGGCCAGAATGGAGAACGGAGTTCTTACTGTGACAGTACCGAAAGTGGAAGCGAAGAAGCCTGAAATCAAGTCCATTGAAATCTCTGCTTGA

Coding sequence (CDS)

ATGGCTCTGATTCCCAGCATTTTCGGTGGCCGCCGGAGCAACATCTTCGACCCCTTCTCATTGGACGCTTGGGATCCATTCCAAGGCTTCTCACTGGCTAACGTGCCTTCCTCCGCCCAGGAGGCCTCTGCTTTTGCCAACACTCGCATCGACTGGAAGGAGACACCGCAAGCCCATATCTTCACAGCCGATCTCCCTGGGATCAACAAAGACCAACTCAAAGTTGAGGTTGAAGAAGGCAGAGTTTTGCAGATCAGTGGAGAGAGAAGCAAAGAACAGGAGGAGAAGAATGAGAAATGGCATAGAATTGAGCGGAGCAGTGGGAAGTTCATGAGGAGATTTAGGCTCCCAGAAGATGCCAAAGTTGAGGAGGTGAAGGCCAGAATGGAGAACGGAGTTCTTACTGTGACAGTACCGAAAGTGGAAGCGAAGAAGCCTGAAATCAAGTCCATTGAAATCTCTGCTTGA

Protein sequence

MALIPSIFGGRRSNIFDPFSLDAWDPFQGFSLANVPSSAQEASAFANTRIDWKETPQAHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLPEDAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEISA

Homology

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BLAST of Csor.00g027290 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.3e-60
Identity = 112/156 (71.79%), Postives = 137/156 (87.82%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGFSLANVPSS--AQEASAFANTRIDWKETPQA 60
           M++IPS FGGRRSN+FDPFSLD WDPF+ F L    +S   +E +AF NT IDWKETPQA
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQA 60

Query: 61  HIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLPE 120
           H+F ADLPG+ K+++KVE+EEG+VLQISGER+KE+EEKN+KWHR+ERSSGKF+RRFRLPE
Sbjct: 61  HVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPE 120

Query: 121 DAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEIS 155
           +AKV+EVKA M NGV+TVTVPKVE KKPE+K+I+IS
Sbjct: 121 NAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDIS 156

[Close]

BLAST of Csor.00g027290 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.9e-59
Identity = 113/159 (71.07%), Postives = 137/159 (86.16%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGF-----SLANVPSSAQEASAFANTRIDWKET 60
           M+LIPSIFGGRRSN+FDPFS D WDPF+GF     +LAN  S+A++ +AF N R+DWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKET 60

Query: 61  PQAHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFR 120
           P+AH+F ADLPG+ K+++KVEVE+  VLQISGERSKE EEKN+KWHR+ER+SGKFMRRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPEDAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEIS 155
           LPE+AK+EEVKA MENGVLTV VPK   KKP++KSI+IS
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDIS 158

[Close]

BLAST of Csor.00g027290 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 228.0 bits (580), Expect = 7.2e-59
Identity = 110/158 (69.62%), Postives = 136/158 (86.08%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGF----SLANVPSSAQEASAFANTRIDWKETP 60
           M+LIPSIFGGRR+N+FDPFSLD +DPF+GF     LAN P  A + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61  QAHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           +AH+F ADLPG+ K+++KVEVE+G +LQISGERS E EEKN+KWHR+ERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PEDAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEIS 155
           PE+AK+EE+KA MENGVL+VTVPKV  KKPE+KSI+IS
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDIS 156

[Close]

BLAST of Csor.00g027290 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.6e-58
Identity = 110/157 (70.06%), Postives = 136/157 (86.62%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGFSLANVPSSA---QEASAFANTRIDWKETPQ 60
           M+LIPS FGGRRSN+FDPFSLD WDPF+ F   N   SA   +E SAF +TR+DWKETP+
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPE 60

Query: 61  AHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLP 120
           AH+F ADLPG+ K+++KVE+E+ RVLQISGERS E+E+KN++WHR+ERSSGKFMRRFRLP
Sbjct: 61  AHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLP 120

Query: 121 EDAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEIS 155
           E+AK+++VKA MENGVLTVTVPK E KKPE+K+I+IS
Sbjct: 121 ENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDIS 157

[Close]

BLAST of Csor.00g027290 vs. ExPASy Swiss-Prot
Match: P19036 (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 226.5 bits (576), Expect = 2.1e-58
Identity = 106/157 (67.52%), Postives = 135/157 (85.99%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGF---SLANVPSSAQEASAFANTRIDWKETPQ 60
           M+L+PS FGGRR+N+FDPFSLD WDPF+GF    L N P  A++ +AF N ++DW+ETP+
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAP--AKDVAAFTNAKVDWRETPE 60

Query: 61  AHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLP 120
           AH+F AD+PG+ K+++KVEVE+G +LQISGERS E EEK++ WHR+ERSSGKFMRRFRLP
Sbjct: 61  AHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLP 120

Query: 121 EDAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEIS 155
           E+AKVEEVKA MENGVL+VTVPKV+  KPE+KS++IS
Sbjct: 121 ENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDIS 155

[Close]

BLAST of Csor.00g027290 vs. NCBI nr
Match: KAG6600962.1 (17.6 kDa class I heat shock protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 301 bits (771), Expect = 6.56e-103
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGFSLANVPSSAQEASAFANTRIDWKETPQAHI 60
           MALIPSIFGGRRSNIFDPFSLDAWDPFQGFSLANVPSSAQEASAFANTRIDWKETPQAHI
Sbjct: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGFSLANVPSSAQEASAFANTRIDWKETPQAHI 60

Query: 61  FTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLPEDA 120
           FTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLPEDA
Sbjct: 61  FTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLPEDA 120

Query: 121 KVEEVKARMENGVLTVTVPKVEAKKPEIKSIEISA 155
           KVEEVKARMENGVLTVTVPKVEAKKPEIKSIEISA
Sbjct: 121 KVEEVKARMENGVLTVTVPKVEAKKPEIKSIEISA 155

[Close]

BLAST of Csor.00g027290 vs. NCBI nr
Match: XP_022978171.1 (17.8 kDa class I heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 295 bits (755), Expect = 1.81e-100
Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGFSLANVPSSAQEASAFANTRIDWKETPQAHI 60
           MAL+PSIFGGRRSNIFDPFSLDAWDPFQGFS ANVPSSA+E SAFANTRIDWKETPQAHI
Sbjct: 1   MALVPSIFGGRRSNIFDPFSLDAWDPFQGFSPANVPSSARETSAFANTRIDWKETPQAHI 60

Query: 61  FTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLPEDA 120
           FTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLPEDA
Sbjct: 61  FTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLPEDA 120

Query: 121 KVEEVKARMENGVLTVTVPKVEAKKPEIKSIEISA 155
           KVEEVKARMENGVLTVTVPKVEAKKPEIKSIEISA
Sbjct: 121 KVEEVKARMENGVLTVTVPKVEAKKPEIKSIEISA 155

[Close]

BLAST of Csor.00g027290 vs. NCBI nr
Match: XP_023529988.1 (17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 287 bits (735), Expect = 2.33e-97
Identity = 152/159 (95.60%), Postives = 153/159 (96.23%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGF----SLANVPSSAQEASAFANTRIDWKETP 60
           MALIPSIFGGRRSNIFDPFSLDA DPFQGF    SLANVPSSA+E SAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNIFDPFSLDACDPFQGFPFSSSLANVPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120

Query: 121 PEDAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEISA 155
           PEDAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEISA
Sbjct: 121 PEDAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEISA 159

[Close]

BLAST of Csor.00g027290 vs. NCBI nr
Match: ADU55794.1 (HSP18.1B [Citrullus lanatus])

HSP 1 Score: 269 bits (688), Expect = 3.40e-90
Identity = 138/158 (87.34%), Postives = 146/158 (92.41%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGF----SLANVPSSAQEASAFANTRIDWKETP 60
           M+LIPS FGGRRSN+FDPFSLD WDPF+GF    +LAN+PSSA E SAFANTRIDWKETP
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDLWDPFEGFPFPTTLANLPSSALETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIF ADLPGI KD++KVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKDEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120

Query: 121 PEDAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEIS 154
           PEDAKVEEVKA MENGVLTVTVPKVE KKPEIKSI+IS
Sbjct: 121 PEDAKVEEVKASMENGVLTVTVPKVEVKKPEIKSIDIS 158

[Close]

BLAST of Csor.00g027290 vs. NCBI nr
Match: KAA0051547.1 (17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK21276.1 17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 268 bits (684), Expect = 1.39e-89
Identity = 135/158 (85.44%), Postives = 149/158 (94.30%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGF----SLANVPSSAQEASAFANTRIDWKETP 60
           MALIP+IFGGRRSN+FDPFSLD WDPF+GF    SLAN+PSSA++ SAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIF ADLPGINK+++KVEVEEGRVLQISGERSKEQEEKN+KWHR+ERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PEDAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEIS 154
           PE+AKVEEVKA MENGVLTVTVPK+E KKPEIKSI+IS
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDIS 158

[Close]

BLAST of Csor.00g027290 vs. ExPASy TrEMBL
Match: A0A6J1IM04 (17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111478232 PE=3 SV=1)

HSP 1 Score: 295 bits (755), Expect = 8.75e-101
Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGFSLANVPSSAQEASAFANTRIDWKETPQAHI 60
           MAL+PSIFGGRRSNIFDPFSLDAWDPFQGFS ANVPSSA+E SAFANTRIDWKETPQAHI
Sbjct: 1   MALVPSIFGGRRSNIFDPFSLDAWDPFQGFSPANVPSSARETSAFANTRIDWKETPQAHI 60

Query: 61  FTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLPEDA 120
           FTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLPEDA
Sbjct: 61  FTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLPEDA 120

Query: 121 KVEEVKARMENGVLTVTVPKVEAKKPEIKSIEISA 155
           KVEEVKARMENGVLTVTVPKVEAKKPEIKSIEISA
Sbjct: 121 KVEEVKARMENGVLTVTVPKVEAKKPEIKSIEISA 155

[Close]

BLAST of Csor.00g027290 vs. ExPASy TrEMBL
Match: H6TB47 (HSP18.1B OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 269 bits (688), Expect = 1.65e-90
Identity = 138/158 (87.34%), Postives = 146/158 (92.41%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGF----SLANVPSSAQEASAFANTRIDWKETP 60
           M+LIPS FGGRRSN+FDPFSLD WDPF+GF    +LAN+PSSA E SAFANTRIDWKETP
Sbjct: 1   MSLIPSFFGGRRSNVFDPFSLDLWDPFEGFPFPTTLANLPSSALETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIF ADLPGI KD++KVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKDEVKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120

Query: 121 PEDAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEIS 154
           PEDAKVEEVKA MENGVLTVTVPKVE KKPEIKSI+IS
Sbjct: 121 PEDAKVEEVKASMENGVLTVTVPKVEVKKPEIKSIDIS 158

[Close]

BLAST of Csor.00g027290 vs. ExPASy TrEMBL
Match: A0A5A7UAZ9 (17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold101G00300 PE=3 SV=1)

HSP 1 Score: 268 bits (684), Expect = 6.71e-90
Identity = 135/158 (85.44%), Postives = 149/158 (94.30%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGF----SLANVPSSAQEASAFANTRIDWKETP 60
           MALIP+IFGGRRSN+FDPFSLD WDPF+GF    SLAN+PSSA++ SAFANTRIDWKETP
Sbjct: 1   MALIPTIFGGRRSNVFDPFSLDIWDPFEGFPFSNSLANLPSSARDTSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIF ADLPGINK+++KVEVEEGRVLQISGERSKEQEEKN+KWHR+ERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGINKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRVERSSGKFMRRFRL 120

Query: 121 PEDAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEIS 154
           PE+AKVEEVKA MENGVLTVTVPK+E KKPEIKSI+IS
Sbjct: 121 PENAKVEEVKASMENGVLTVTVPKMEEKKPEIKSIDIS 158

[Close]

BLAST of Csor.00g027290 vs. ExPASy TrEMBL
Match: A0A5D3BEM2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G001020 PE=3 SV=1)

HSP 1 Score: 267 bits (683), Expect = 9.53e-90
Identity = 136/158 (86.08%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGFS----LANVPSSAQEASAFANTRIDWKETP 60
           MALIPSIFGGRRSN+FDPFSLD WDPF+GFS    LAN+PSSA+E SAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIF ADLPGI K+++KVEVEEGRVLQISGERSKEQEEKN+KWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PEDAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEIS 154
           PE+AKVEEVKA MENGVLTVTVPK+E KKPEIKSI+I+
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIA 158

[Close]

BLAST of Csor.00g027290 vs. ExPASy TrEMBL
Match: A0A1S3CIN2 (18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408 PE=3 SV=1)

HSP 1 Score: 267 bits (683), Expect = 9.53e-90
Identity = 136/158 (86.08%), Postives = 148/158 (93.67%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGFS----LANVPSSAQEASAFANTRIDWKETP 60
           MALIPSIFGGRRSN+FDPFSLD WDPF+GFS    LAN+PSSA+E SAFANTRIDWKETP
Sbjct: 1   MALIPSIFGGRRSNVFDPFSLDIWDPFEGFSFSNSLANLPSSARETSAFANTRIDWKETP 60

Query: 61  QAHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           QAHIF ADLPGI K+++KVEVEEGRVLQISGERSKEQEEKN+KWHRIERSSGKFMRRFRL
Sbjct: 61  QAHIFKADLPGIKKEEVKVEVEEGRVLQISGERSKEQEEKNDKWHRIERSSGKFMRRFRL 120

Query: 121 PEDAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEIS 154
           PE+AKVEEVKA MENGVLTVTVPK+E KKPEIKSI+I+
Sbjct: 121 PENAKVEEVKANMENGVLTVTVPKMEEKKPEIKSIDIA 158

[Close]

BLAST of Csor.00g027290 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 229.9 bits (585), Expect = 1.3e-60
Identity = 113/159 (71.07%), Postives = 137/159 (86.16%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGF-----SLANVPSSAQEASAFANTRIDWKET 60
           M+LIPSIFGGRRSN+FDPFS D WDPF+GF     +LAN  S+A++ +AF N R+DWKET
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKET 60

Query: 61  PQAHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFR 120
           P+AH+F ADLPG+ K+++KVEVE+  VLQISGERSKE EEKN+KWHR+ER+SGKFMRRFR
Sbjct: 61  PEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFR 120

Query: 121 LPEDAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEIS 155
           LPE+AK+EEVKA MENGVLTV VPK   KKP++KSI+IS
Sbjct: 121 LPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDIS 158

[Close]

BLAST of Csor.00g027290 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 228.0 bits (580), Expect = 5.1e-60
Identity = 110/158 (69.62%), Postives = 136/158 (86.08%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGF----SLANVPSSAQEASAFANTRIDWKETP 60
           M+LIPSIFGGRR+N+FDPFSLD +DPF+GF     LAN P  A + +AF N ++DW+ETP
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETP 60

Query: 61  QAHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRL 120
           +AH+F ADLPG+ K+++KVEVE+G +LQISGERS E EEKN+KWHR+ERSSGKF RRFRL
Sbjct: 61  EAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRL 120

Query: 121 PEDAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEIS 155
           PE+AK+EE+KA MENGVL+VTVPKV  KKPE+KSI+IS
Sbjct: 121 PENAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDIS 156

[Close]

BLAST of Csor.00g027290 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 226.5 bits (576), Expect = 1.5e-59
Identity = 106/157 (67.52%), Postives = 135/157 (85.99%), Query Frame = 0


Query: 1   MALIPSIFGGRRSNIFDPFSLDAWDPFQGF---SLANVPSSAQEASAFANTRIDWKETPQ 60
           M+L+PS FGGRR+N+FDPFSLD WDPF+GF    L N P  A++ +AF N ++DW+ETP+
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAP--AKDVAAFTNAKVDWRETPE 60

Query: 61  AHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLP 120
           AH+F AD+PG+ K+++KVEVE+G +LQISGERS E EEK++ WHR+ERSSGKFMRRFRLP
Sbjct: 61  AHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLP 120

Query: 121 EDAKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEIS 155
           E+AKVEEVKA MENGVL+VTVPKV+  KPE+KS++IS
Sbjct: 121 ENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDIS 155

[Close]

BLAST of Csor.00g027290 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 197.6 bits (501), Expect = 7.4e-51
Identity = 97/155 (62.58%), Postives = 126/155 (81.29%), Query Frame = 0


Query: 1   MALIPSIF-GGRRSNIFDPFSLDAWDPFQGFSLANVPSSAQEASAFANTRIDWKETPQAH 60
           M++IPS F   RRSNIFDPFSLD WDPF+  + +   S ++E SA  N R+DW+ETP+AH
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSS---SLSRENSAIVNARVDWRETPEAH 60

Query: 61  IFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLPED 120
           +F ADLPG+ K+++KVE+EE  VL+ISGER  E+E+KN+ WHR+ERSSG+F RRFRLPE+
Sbjct: 61  VFKADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPEN 120

Query: 121 AKVEEVKARMENGVLTVTVPKVEAKKPEIKSIEIS 155
            K+++VKA MENGVLTVTVPK E KK ++KSI+IS
Sbjct: 121 VKMDQVKAAMENGVLTVTVPKAETKKADVKSIQIS 152

[Close]

BLAST of Csor.00g027290 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 186.4 bits (472), Expect = 1.7e-47
Identity = 98/159 (61.64%), Postives = 124/159 (77.99%), Query Frame = 0


Query: 1   MALIPSIFGGRR---SNIFDPFSLDAWDPFQGFSLANVPSSAQEASAFANTRIDWKETPQ 60
           M+LIPS FG  R   +NIFDPFSLD WDPF+       PSS+  +SA AN R+DWKET +
Sbjct: 1   MSLIPSFFGNNRRINNNIFDPFSLDVWDPFKELQF---PSSS--SSAIANARVDWKETAE 60

Query: 61  AHIFTADLPGINKDQLKVEVEEGRVLQISGERSKEQEEKNEKWHRIERSSGKFMRRFRLP 120
           AH+F ADLPG+ K+++KVE+E+  VL+ISGER  E+EEK + WHR+ERSSG F R+FRLP
Sbjct: 61  AHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGGFSRKFRLP 120

Query: 121 EDAKVEEVKARMENGVLTVTVPKVEA--KKPEIKSIEIS 155
           E+ K+++VKA MENGVLTVTVPKVE   KK ++KSI+IS
Sbjct: 121 ENVKMDQVKASMENGVLTVTVPKVETNKKKAQVKSIDIS 154

The following BLAST results are available for this feature:

BLAST of Csor.00g027290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27396	1.3e-60	71.79	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P19037	1.9e-59	71.07	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P13853	7.2e-59	69.62	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
P27880	1.6e-58	70.06	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
P19036	2.1e-58	67.52	17.4 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.4A ...	[more]

BLAST of Csor.00g027290 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600962.1	6.56e-103	100.00	17.6 kDa class I heat shock protein 3, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_022978171.1	1.81e-100	97.42	17.8 kDa class I heat shock protein-like [Cucurbita maxima]	[more]
XP_023529988.1	2.33e-97	95.60	17.8 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
ADU55794.1	3.40e-90	87.34	HSP18.1B [Citrullus lanatus]	[more]
KAA0051547.1	1.39e-89	85.44	17.8 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK21276.1 ...	[more]

BLAST of Csor.00g027290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IM04	8.75e-101	97.42	17.8 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
H6TB47	1.65e-90	87.34	HSP18.1B OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A5A7UAZ9	6.71e-90	85.44	17.8 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3BEM2	9.53e-90	86.08	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CIN2	9.53e-90	86.08	18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103501408...	[more]

BLAST of Csor.00g027290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	1.3e-60	71.07	heat shock protein 18.2	[more]
AT1G53540.1	5.1e-60	69.62	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	1.5e-59	67.52	heat shock protein 17.4	[more]
AT2G29500.1	7.4e-51	62.58	HSP20-like chaperones superfamily protein	[more]
AT1G59860.1	1.7e-47	61.64	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 9..155 e-value: 2.7E-51 score: 175.2
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 23..154
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 51..154 e-value: 3.0E-29 score: 101.2
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 41..155 score: 31.822556
None	No IPR available	PANTHER	PTHR11527:SF325	17.8 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..154
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 49..140 e-value: 1.44952E-54 score: 165.171
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g027290.m01	Csor.00g027290.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding