Csor.00g026470 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAGCACGGTTTGGCGGAACAGTGTAGTATTGGGCAGCTCGATTTTCCGCCGGGTGTCGCCGTCGCAATTGCAGTCCTTCACCGTCTCTTCAAATCTCTCGTTTTCGCTTCCTCTCCGACGATCAACAGCCAAAATCTTGGCCATGGCAATGTCGAATGGATCGAGCAGTGGAGTGGTTCGCTTCAAAGTATCTCCCTCAACCTCCTGCGTTATTCAGAAGGGTGACATCACAAAGTGGTTCATCGATGGTTCTTCTGATGCCATTGTCGGTGACTCTATCTTTCTATTTTTGCTCAGAATCGGCTATTTTTATTTAGGGTTTATACTTATTTGCTTACTGGAAAGGGTGGTGGGAAGTAATCGGTTGAAAGCTCCGTGTTTTTGAGTAATGATCAGAACCATCTTTTGTTCAAATGATGGAATGGTTTGTTTTTGATGAATCGCTTTAAGTTTGTAGTTAAGTAAGAAATGGGTAGATGCTGTAGGAATTGCTTCCCCATTGCTATGCTTCGCGACCTGGAGGTATCTAGAATCATCAATGATTGGGGACTTGTATAGATTTAGGTAGATGCTGTAGGAATTGCTTCCCCAATATATATATTTTTTGACTCCAAAAAGTGGTTGCATTATAAGCTAAACCATTGCTCCAAGAAAGAAGATAAAGAAGTAGGTTATCAATGTAATGAACTACCTTGTGGGTTTAAGGCAAGGTGACCTTTTCTTTTCCTCTTGGTGGTTGATGAACTAAGCAGATTCGTGTTGTCAGGTGTGGAGAAAAGAGTGGATGGTGATTGAGGGGTTTAAGGTCGGGCAGGATTTGGTTCACATTTCGCATATTCAGTTCGTAGACGAAATCTATATGTATAGAAGATTTAATCCCACTTACTGAGTAAATTAATTGTGAGATCCCACGTCAGTTGGGGAAGAGAACGAAACATTCTTTATAAGGGTGTGGAAATCTCTCCCTAGCATACGCGTTTTAAAAAGCTTGAGGGAAAGCTCGAAAGGGAAAGCCCAAAGAGGACCATGTTTGTTAGCGGTGAGCTTGGGCCGTTACACTAACAAACTCAAACTTAAAAATTACAAAACTATTACTAATTTTTCTATATCCGTAAGAAAGATCCATATGTTTTGTCCTGTATTTTCTTGTTTTTCAGAGTTTCCAATCCCATGAAATCTATTAAACTTTGGTTTCTTTGGCTTAAATCTTATTTAGGTTAATCCAGCTAATGAAGTAATGCTTGGAGGTGGTGGTGCTGATGGAGGTATGGAGTTTCAACTGTGTTTTAGTTTTATAACTTGTTACACGAACTTGCCATCTTGAATATTCTTTCCTCATCGTTTTGTAGCGATACATAATGCTGCTGGACCTGATCTCGTGCAAGCATGTTATTCTGTCCAAGAAGTCCAACCTGGAATCCGTTGTCCAACTGGAGAAGCAAGGATTACTCCGTACGTAACTGATCACGACCATTAGTTTTGTTTGTAGATGCTAATGTGATCTTCAAATGCAGAGGTTTTCGGTTGCCAGCATCTCATGTAATCCATACCGTTGGACCCATCTACAACGCCAGTAGTAACCCCCAGGCCTTATTGAGAAGCGCATATAGGTTCTTGTTATGTAATTGCACTTCCTTTTCATTTTGATTTACCATTCAGGACTTATCCATTTTTATTGCCATATTAATTTAGAAATTCCTTGGCTGTGGCAAAGGAGAATAACATTCAATATATTGCCTTTCCCGCCATATCCTGTGGTGTATATCGGTAAGTTATGATATTGATTTAGAAATTTCAGCATTCGTTAGCTTTATACCGTTTTTTAATTATAAAAAATCAGTAGTTCCCTAATTGATTGATCAGGTTCCTCTTGATTTAGTTTTCTAATGGCATGGGTTTGTGTGTGTGTTAGTTTATACCATTTTTCTATTATAAAAGATTAGTTGGTTAATGATTTGATTGATACAGATTCCTCTTGAAAATATTTGTTTAGTGATTTTTATTATACACTTGCAGATATCCTTTTGATGAAGCTGCCACAATAGCCTTATCAACCGTTAAAGAGTTTTCCAATGGCTTGAAAGAGGTAAGGCATTGTTCTATGGTACTTAGGGAATGTATCCTTGTTTTTGTTACAGTATGTGAATATGTTCCTAAAGTATTTTTGACATGTTTAGATTATTCCATCACGGTCCTCTTTAGCGTCGACCTCTTATCTTTGATTGGGAAGTTTTCGGTTAGCCCTAGGAGATCGATCATCTTTGGGGGCACTGTCCTGTCAATGGGTTTTCTTATAGTTCCTTCTTCTATTGCATGCTGATCTGCTTTCTGCCCATTCTTTCAAGTGTTTGAGACTTTCTTAGCTTTACTCGAGCCACTTTTGAAGCTCGGTGGCACTCTTTCTAACAGAGAGTGGTCAATAAGATGAGACATCATAGGTTGCTGACTACTAGTAACCTCGAGAGGACCCTTTTGAGTTTGGGAACTTTTTTGACAATGAAAACTAGACCGTGCCCCATTAAGCGACTGGACCAAGTTCTTTGAGAAAATGCTTTGAAATTCGGTCAACAAGTCTTGGATGCGATTCTCTTGTCGTTTGTAAAGATGTGGAAGGGTCATACAAATAACAGCTCAAGTCCACTTCTAGCAGATATCGTCATTTTTAGGCTTTCACTTTCAAGCTTCCCCTTATGGTTTTTAAAACGCGTCTGATAGGGAGAGATTTTCACATTCTTATAAAGAATGTTTTGTTTCCTTTTCCAACTGACGTGAGATCTCACAATATTGATGGATTATGGATTGTCTCTCGGATTGCAATGACGTGCTCTACAACTGAACAACACACTTGGCTTTTTTAAAGCAATGGGAATTCCATTATTTGCATTGACGTGCTGTACATTATTTGCAGGTACACTTTGTCCTTTATTCTTCTGATATTTACAATGTTTGGTTGGAGAAGGCAAATGAACTGCTCAAGAACTAA ATGACAAGCACGGTTTGGCGGAACAGTGTAGTATTGGGCAGCTCGATTTTCCGCCGGGTGTCGCCGTCGCAATTGCAGTCCTTCACCGTCTCTTCAAATCTCTCGTTTTCGCTTCCTCTCCGACGATCAACAGCCAAAATCTTGGCCATGGCAATGTCGAATGGATCGAGCAGTGGAGTGGTTCGCTTCAAAGTATCTCCCTCAACCTCCTGCGTTATTCAGAAGGGTGACATCACAAAGTGGTTCATCGATGGTTCTTCTGATGCCATTGTTAATCCAGCTAATGAAGTAATGCTTGGAGGTGGTGGTGCTGATGGAGCGATACATAATGCTGCTGGACCTGATCTCGTGCAAGCATGTTATTCTGTCCAAGAAGTCCAACCTGGAATCCGTTGTCCAACTGGAGAAGCAAGGATTACTCCAGGTTTTCGGTTGCCAGCATCTCATGTAATCCATACCGTTGGACCCATCTACAACGCCAGTAGTAACCCCCAGGCCTTATTGAGAAGCGCATATAGAAATTCCTTGGCTGTGGCAAAGGAGAATAACATTCAATATATTGCCTTTCCCGCCATATCCTGTGGTGTATATCGATATCCTTTTGATGAAGCTGCCACAATAGCCTTATCAACCGTTAAAGAGTTTTCCAATGGCTTGAAAGAGGTACACTTTGTCCTTTATTCTTCTGATATTTACAATGTTTGGTTGGAGAAGGCAAATGAACTGCTCAAGAACTAA ATGACAAGCACGGTTTGGCGGAACAGTGTAGTATTGGGCAGCTCGATTTTCCGCCGGGTGTCGCCGTCGCAATTGCAGTCCTTCACCGTCTCTTCAAATCTCTCGTTTTCGCTTCCTCTCCGACGATCAACAGCCAAAATCTTGGCCATGGCAATGTCGAATGGATCGAGCAGTGGAGTGGTTCGCTTCAAAGTATCTCCCTCAACCTCCTGCGTTATTCAGAAGGGTGACATCACAAAGTGGTTCATCGATGGTTCTTCTGATGCCATTGTTAATCCAGCTAATGAAGTAATGCTTGGAGGTGGTGGTGCTGATGGAGCGATACATAATGCTGCTGGACCTGATCTCGTGCAAGCATGTTATTCTGTCCAAGAAGTCCAACCTGGAATCCGTTGTCCAACTGGAGAAGCAAGGATTACTCCAGGTTTTCGGTTGCCAGCATCTCATGTAATCCATACCGTTGGACCCATCTACAACGCCAGTAGTAACCCCCAGGCCTTATTGAGAAGCGCATATAGAAATTCCTTGGCTGTGGCAAAGGAGAATAACATTCAATATATTGCCTTTCCCGCCATATCCTGTGGTGTATATCGATATCCTTTTGATGAAGCTGCCACAATAGCCTTATCAACCGTTAAAGAGTTTTCCAATGGCTTGAAAGAGGTACACTTTGTCCTTTATTCTTCTGATATTTACAATGTTTGGTTGGAGAAGGCAAATGAACTGCTCAAGAACTAA MTSTVWRNSVVLGSSIFRRVSPSQLQSFTVSSNLSFSLPLRRSTAKILAMAMSNGSSSGVVRFKVSPSTSCVIQKGDITKWFIDGSSDAIVNPANEVMLGGGGADGAIHNAAGPDLVQACYSVQEVQPGIRCPTGEARITPGFRLPASHVIHTVGPIYNASSNPQALLRSAYRNSLAVAKENNIQYIAFPAISCGVYRYPFDEAATIALSTVKEFSNGLKEVHFVLYSSDIYNVWLEKANELLKN Homology
BLAST of Csor.00g026470 vs. ExPASy Swiss-Prot
Match: Q87JZ5 (Macro domain-containing protein VPA0103 OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=VPA0103 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.9e-37 Identity = 81/161 (50.31%), Postives = 108/161 (67.08%), Query Frame = 0
BLAST of Csor.00g026470 vs. ExPASy Swiss-Prot
Match: Q8P5Z8 (Macro domain-containing protein XCC3184 OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=XCC3184 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 6.7e-35 Identity = 77/167 (46.11%), Postives = 107/167 (64.07%), Query Frame = 0
BLAST of Csor.00g026470 vs. ExPASy Swiss-Prot
Match: Q8PHB6 (Macro domain-containing protein XAC3343 OS=Xanthomonas axonopodis pv. citri (strain 306) OX=190486 GN=XAC3343 PE=4 SV=2) HSP 1 Score: 148.3 bits (373), Expect = 1.1e-34 Identity = 76/167 (45.51%), Postives = 107/167 (64.07%), Query Frame = 0
BLAST of Csor.00g026470 vs. ExPASy Swiss-Prot
Match: Q9HXU7 (Macro domain-containing protein PA3693 OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=PA3693 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 5.7e-34 Identity = 81/167 (48.50%), Postives = 107/167 (64.07%), Query Frame = 0
BLAST of Csor.00g026470 vs. ExPASy Swiss-Prot
Match: Q8Y2K1 (Macro domain-containing protein RSc0334 OS=Ralstonia solanacearum (strain GMI1000) OX=267608 GN=RSc0334 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.2e-33 Identity = 78/164 (47.56%), Postives = 108/164 (65.85%), Query Frame = 0
BLAST of Csor.00g026470 vs. NCBI nr
Match: KAG6600880.1 (hypothetical protein SDJN03_06113, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 481 bits (1239), Expect = 2.77e-171 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
BLAST of Csor.00g026470 vs. NCBI nr
Match: KAG7031514.1 (hypothetical protein SDJN02_05554 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 480 bits (1235), Expect = 1.13e-170 Identity = 244/245 (99.59%), Postives = 245/245 (100.00%), Query Frame = 0
BLAST of Csor.00g026470 vs. NCBI nr
Match: XP_022943121.1 (uncharacterized protein LOC111447945 [Cucurbita moschata] >XP_023529382.1 uncharacterized protein LOC111792254 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 477 bits (1228), Expect = 1.32e-169 Identity = 242/245 (98.78%), Postives = 243/245 (99.18%), Query Frame = 0
BLAST of Csor.00g026470 vs. NCBI nr
Match: XP_022987338.1 (uncharacterized protein LOC111484918 [Cucurbita maxima]) HSP 1 Score: 471 bits (1212), Expect = 3.62e-167 Identity = 238/245 (97.14%), Postives = 241/245 (98.37%), Query Frame = 0
BLAST of Csor.00g026470 vs. NCBI nr
Match: XP_038891619.1 (macro domain-containing protein VPA0103, partial [Benincasa hispida]) HSP 1 Score: 427 bits (1098), Expect = 1.64e-149 Identity = 215/245 (87.76%), Postives = 230/245 (93.88%), Query Frame = 0
BLAST of Csor.00g026470 vs. ExPASy TrEMBL
Match: A0A6J1FQU9 (uncharacterized protein LOC111447945 OS=Cucurbita moschata OX=3662 GN=LOC111447945 PE=4 SV=1) HSP 1 Score: 477 bits (1228), Expect = 6.37e-170 Identity = 242/245 (98.78%), Postives = 243/245 (99.18%), Query Frame = 0
BLAST of Csor.00g026470 vs. ExPASy TrEMBL
Match: A0A6J1JJ63 (uncharacterized protein LOC111484918 OS=Cucurbita maxima OX=3661 GN=LOC111484918 PE=4 SV=1) HSP 1 Score: 471 bits (1212), Expect = 1.75e-167 Identity = 238/245 (97.14%), Postives = 241/245 (98.37%), Query Frame = 0
BLAST of Csor.00g026470 vs. ExPASy TrEMBL
Match: A0A1S3C4C8 (macro domain-containing protein VPA0103 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496741 PE=4 SV=1) HSP 1 Score: 414 bits (1065), Expect = 4.77e-145 Identity = 207/245 (84.49%), Postives = 222/245 (90.61%), Query Frame = 0
BLAST of Csor.00g026470 vs. ExPASy TrEMBL
Match: A0A1S3C4G0 (macro domain-containing protein VPA0103 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496741 PE=4 SV=1) HSP 1 Score: 408 bits (1049), Expect = 1.56e-142 Identity = 207/250 (82.80%), Postives = 222/250 (88.80%), Query Frame = 0
BLAST of Csor.00g026470 vs. ExPASy TrEMBL
Match: A0A6J1CYJ5 (uncharacterized protein LOC111015968 OS=Momordica charantia OX=3673 GN=LOC111015968 PE=4 SV=1) HSP 1 Score: 375 bits (962), Expect = 1.63e-129 Identity = 191/234 (81.62%), Postives = 207/234 (88.46%), Query Frame = 0
BLAST of Csor.00g026470 vs. TAIR 10
Match: AT2G40600.1 (appr-1-p processing enzyme family protein ) HSP 1 Score: 271.6 bits (693), Expect = 6.4e-73 Identity = 139/235 (59.15%), Postives = 172/235 (73.19%), Query Frame = 0
BLAST of Csor.00g026470 vs. TAIR 10
Match: AT1G69340.1 (appr-1-p processing enzyme family protein ) HSP 1 Score: 72.4 bits (176), Expect = 5.7e-13 Identity = 59/181 (32.60%), Postives = 85/181 (46.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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