Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATTCCTTCCCGAGTTCGTTTCTTGCTGCGTGCCGGTTAGCGTGTCGCGCATGGAGAATTCGGAAGCGACGGAGGCTCCGGGAGCCGAGGAGATAAGATCTCTGGCTCCGATCACCACCAGAATACAACGGCGTAGAAGACGAGGCGCGCTGTATACTTCGGCGGCTAAAATGGCCGGCGATTGGACGCCGTCGCTCGGAGCGATCTCAGAGGATAATGTAGTTCTGGTAGTGATGGAGAGAAAGAAGAACGAGGATCGGACGGCGGAATCAGAGCGATCTGTGAAGAGGAAGAGCGGATCTCGAAATGGAAAGGCAAGAGGAGTTCACGGACGTAACAACAGCAACGATTTTAGGTACGTACGTTTGTCAGTTCGTGAATCTTCCGTATCATTATCGAAATCGTAACGATCCGTGAAATGAAAACGACGTCTGGAAAGAATCTTTTTGTTAATTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGGCGAAGTCCGGCGGCCATACCGGTGGTGATTCCGGCGTTTTCTCCAACTCCGTTCTTATTCTGA
mRNA sequence
ATGAAATTCCTTCCCGAGTTCGTTTCTTGCTGCGTGCCGGTTAGCGTGTCGCGCATGGAGAATTCGGAAGCGACGGAGGCTCCGGGAGCCGAGGAGATAAGATCTCTGGCTCCGATCACCACCAGAATACAACGGCGTAGAAGACGAGGCGCGCTGTATACTTCGGCGGCTAAAATGGCCGGCGATTGGACGCCGTCGCTCGGAGCGATCTCAGAGGATAATGTAGTTCTGGTAGTGATGGAGAGAAAGAAGAACGAGGATCGGACGGCGGAATCAGAGCGATCTGTGAAGAGGAAGAGCGGATCTCGAAATGGAAAGGCAAGAGGAGTTCACGGACGTAACAACAGCAACGATTTTAGGCGAAGTCCGGCGGCCATACCGGTGGTGATTCCGGCGTTTTCTCCAACTCCGTTCTTATTCTGA
Coding sequence (CDS)
ATGAAATTCCTTCCCGAGTTCGTTTCTTGCTGCGTGCCGGTTAGCGTGTCGCGCATGGAGAATTCGGAAGCGACGGAGGCTCCGGGAGCCGAGGAGATAAGATCTCTGGCTCCGATCACCACCAGAATACAACGGCGTAGAAGACGAGGCGCGCTGTATACTTCGGCGGCTAAAATGGCCGGCGATTGGACGCCGTCGCTCGGAGCGATCTCAGAGGATAATGTAGTTCTGGTAGTGATGGAGAGAAAGAAGAACGAGGATCGGACGGCGGAATCAGAGCGATCTGTGAAGAGGAAGAGCGGATCTCGAAATGGAAAGGCAAGAGGAGTTCACGGACGTAACAACAGCAACGATTTTAGGCGAAGTCCGGCGGCCATACCGGTGGTGATTCCGGCGTTTTCTCCAACTCCGTTCTTATTCTGA
Protein sequence
MKFLPEFVSCCVPVSVSRMENSEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMAGDWTPSLGAISEDNVVLVVMERKKNEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFRRSPAAIPVVIPAFSPTPFLF
Homology
BLAST of Csor.00g025210 vs. NCBI nr
Match:
KAG6600756.1 (hypothetical protein SDJN03_05989, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 267 bits (682), Expect = 7.97e-90
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
Query: 1 MKFLPEFVSCCVPVSVSRMENSEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMA 60
MKFLPEFVSCCVPVSVSRMENSEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMA
Sbjct: 1 MKFLPEFVSCCVPVSVSRMENSEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMA 60
Query: 61 GDWTPSLGAISEDNVVLVVMERKKNEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR 120
GDWTPSLGAISEDNVVLVVMERKKNEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR
Sbjct: 61 GDWTPSLGAISEDNVVLVVMERKKNEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR 120
Query: 121 RSPAAIPVVIPAFSPTPFLF 140
RSPAAIPVVIPAFSPTPFLF
Sbjct: 121 RSPAAIPVVIPAFSPTPFLF 140
BLAST of Csor.00g025210 vs. NCBI nr
Match:
XP_023526044.1 (uncharacterized protein LOC111789638 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 263 bits (672), Expect = 2.67e-88
Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
Query: 1 MKFLPEFVSCCVPVSVSRMENSEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMA 60
MKFLPEFVSCCVPVSVSRMEN EATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMA
Sbjct: 1 MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMA 60
Query: 61 GDWTPSLGAISEDNVVLVVMERKKNEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR 120
GDWTPSLGAISEDNVVLVVMERKK+EDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR
Sbjct: 61 GDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR 120
Query: 121 RSPAAIPVVIPAFSPTPFLF 140
RSPAAIPVVIPAFSPTPFLF
Sbjct: 121 RSPAAIPVVIPAFSPTPFLF 140
BLAST of Csor.00g025210 vs. NCBI nr
Match:
XP_022942037.1 (uncharacterized protein LOC111447225 [Cucurbita moschata])
HSP 1 Score: 259 bits (663), Expect = 6.29e-87
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0
Query: 1 MKFLPEFVSCCVPVSVSRMENSEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMA 60
MKFLPEFVSCCVPVSVSRMEN EATEAPGAEEIRSLAPITTRI RRRRRGALYTSAAKMA
Sbjct: 1 MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMA 60
Query: 61 GDWTPSLGAISEDNVVLVVMERKKNEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR 120
GDWTPSLGAISEDNVVLVVMERKK+EDRTAESERSVKRKSGS+NGKARGVHGRNNSNDFR
Sbjct: 61 GDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSQNGKARGVHGRNNSNDFR 120
Query: 121 RSPAAIPVVIPAFSPTPFLF 140
RSPAAIPVVIPAFSPTPFLF
Sbjct: 121 RSPAAIPVVIPAFSPTPFLF 140
BLAST of Csor.00g025210 vs. NCBI nr
Match:
XP_022992846.1 (uncharacterized protein LOC111489053 [Cucurbita maxima])
HSP 1 Score: 255 bits (652), Expect = 2.99e-85
Identity = 134/140 (95.71%), Postives = 136/140 (97.14%), Query Frame = 0
Query: 1 MKFLPEFVSCCVPVSVSRMENSEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMA 60
MKFLPEFVSCCVPVSVSRMEN EATEAPGAEEIRSLAP+TTRI RRRRGA YTSAAKMA
Sbjct: 1 MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPVTTRIHLRRRRGAPYTSAAKMA 60
Query: 61 GDWTPSLGAISEDNVVLVVMERKKNEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR 120
GDWTPSLGAISEDNVVLVVMERKK+EDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR
Sbjct: 61 GDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR 120
Query: 121 RSPAAIPVVIPAFSPTPFLF 140
RSPAAIPVVIPAFSPTPFLF
Sbjct: 121 RSPAAIPVVIPAFSPTPFLF 140
BLAST of Csor.00g025210 vs. NCBI nr
Match:
XP_022932132.1 (uncharacterized protein LOC111438455 [Cucurbita moschata] >XP_023520436.1 uncharacterized protein LOC111783825 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 213 bits (542), Expect = 1.75e-68
Identity = 111/140 (79.29%), Postives = 128/140 (91.43%), Query Frame = 0
Query: 1 MKFLPEFVSCCVPVSVSRMENSEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMA 60
MKFL EFVSCCVPV++SR+EN EAT APG EE++SLAPITTR RRR+RGAL SAAK+A
Sbjct: 1 MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLA 60
Query: 61 GDWTPSLGAISEDNVVLVVMERKKNEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR 120
DW PSLGAISED VVLV+ ER+K++D+TAESERSVKRKSGSR+G+ARGV+GR+NSNDFR
Sbjct: 61 ADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNSNDFR 120
Query: 121 RSPAAIPVVIPAFSPTPFLF 140
RSPA+IPVVIPAFSPTPFLF
Sbjct: 121 RSPASIPVVIPAFSPTPFLF 140
BLAST of Csor.00g025210 vs. ExPASy TrEMBL
Match:
A0A6J1FP47 (uncharacterized protein LOC111447225 OS=Cucurbita moschata OX=3662 GN=LOC111447225 PE=4 SV=1)
HSP 1 Score: 259 bits (663), Expect = 3.05e-87
Identity = 136/140 (97.14%), Postives = 138/140 (98.57%), Query Frame = 0
Query: 1 MKFLPEFVSCCVPVSVSRMENSEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMA 60
MKFLPEFVSCCVPVSVSRMEN EATEAPGAEEIRSLAPITTRI RRRRRGALYTSAAKMA
Sbjct: 1 MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPITTRIHRRRRRGALYTSAAKMA 60
Query: 61 GDWTPSLGAISEDNVVLVVMERKKNEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR 120
GDWTPSLGAISEDNVVLVVMERKK+EDRTAESERSVKRKSGS+NGKARGVHGRNNSNDFR
Sbjct: 61 GDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSQNGKARGVHGRNNSNDFR 120
Query: 121 RSPAAIPVVIPAFSPTPFLF 140
RSPAAIPVVIPAFSPTPFLF
Sbjct: 121 RSPAAIPVVIPAFSPTPFLF 140
BLAST of Csor.00g025210 vs. ExPASy TrEMBL
Match:
A0A6J1JUN0 (uncharacterized protein LOC111489053 OS=Cucurbita maxima OX=3661 GN=LOC111489053 PE=4 SV=1)
HSP 1 Score: 255 bits (652), Expect = 1.45e-85
Identity = 134/140 (95.71%), Postives = 136/140 (97.14%), Query Frame = 0
Query: 1 MKFLPEFVSCCVPVSVSRMENSEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMA 60
MKFLPEFVSCCVPVSVSRMEN EATEAPGAEEIRSLAP+TTRI RRRRGA YTSAAKMA
Sbjct: 1 MKFLPEFVSCCVPVSVSRMENPEATEAPGAEEIRSLAPVTTRIHLRRRRGAPYTSAAKMA 60
Query: 61 GDWTPSLGAISEDNVVLVVMERKKNEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR 120
GDWTPSLGAISEDNVVLVVMERKK+EDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR
Sbjct: 61 GDWTPSLGAISEDNVVLVVMERKKSEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR 120
Query: 121 RSPAAIPVVIPAFSPTPFLF 140
RSPAAIPVVIPAFSPTPFLF
Sbjct: 121 RSPAAIPVVIPAFSPTPFLF 140
BLAST of Csor.00g025210 vs. ExPASy TrEMBL
Match:
A0A6J1EVT0 (uncharacterized protein LOC111438455 OS=Cucurbita moschata OX=3662 GN=LOC111438455 PE=4 SV=1)
HSP 1 Score: 213 bits (542), Expect = 8.50e-69
Identity = 111/140 (79.29%), Postives = 128/140 (91.43%), Query Frame = 0
Query: 1 MKFLPEFVSCCVPVSVSRMENSEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMA 60
MKFL EFVSCCVPV++SR+EN EAT APG EE++SLAPITTR RRR+RGAL SAAK+A
Sbjct: 1 MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPITTRKHRRRKRGALLPSAAKLA 60
Query: 61 GDWTPSLGAISEDNVVLVVMERKKNEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR 120
DW PSLGAISED VVLV+ ER+K++D+TAESERSVKRKSGSR+G+ARGV+GR+NSNDFR
Sbjct: 61 ADWKPSLGAISEDKVVLVLREREKSDDQTAESERSVKRKSGSRDGEARGVNGRSNSNDFR 120
Query: 121 RSPAAIPVVIPAFSPTPFLF 140
RSPA+IPVVIPAFSPTPFLF
Sbjct: 121 RSPASIPVVIPAFSPTPFLF 140
BLAST of Csor.00g025210 vs. ExPASy TrEMBL
Match:
A0A6J1JD62 (uncharacterized protein LOC111483313 OS=Cucurbita maxima OX=3661 GN=LOC111483313 PE=4 SV=1)
HSP 1 Score: 208 bits (530), Expect = 5.72e-67
Identity = 109/140 (77.86%), Postives = 126/140 (90.00%), Query Frame = 0
Query: 1 MKFLPEFVSCCVPVSVSRMENSEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMA 60
MKFL EFVSCCVPV++SR+EN EAT APG EE++SLAPI TR RRR+RGAL SAAK+A
Sbjct: 1 MKFLFEFVSCCVPVNMSRLENPEATAAPGVEEMKSLAPIATRKHRRRKRGALLPSAAKLA 60
Query: 61 GDWTPSLGAISEDNVVLVVMERKKNEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR 120
DW PSLGAISED VVLV+ ER+K++D+TA SERSVKRKSGSR+G+ARGV+GR+NSNDFR
Sbjct: 61 ADWKPSLGAISEDKVVLVLREREKSDDQTAGSERSVKRKSGSRDGEARGVNGRSNSNDFR 120
Query: 121 RSPAAIPVVIPAFSPTPFLF 140
RSPA+IPVVIPAFSPTPFLF
Sbjct: 121 RSPASIPVVIPAFSPTPFLF 140
BLAST of Csor.00g025210 vs. ExPASy TrEMBL
Match:
A0A0A0L6G1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G094500 PE=4 SV=1)
HSP 1 Score: 190 bits (482), Expect = 1.29e-59
Identity = 104/143 (72.73%), Postives = 123/143 (86.01%), Query Frame = 0
Query: 1 MKFLPEFVSCCVPVSVSRMENSEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAA-KM 60
MKFL EFVSCCVPV++SR++N E TEA G++E+RSL PITTR RRR+R AL SAA K+
Sbjct: 1 MKFLFEFVSCCVPVNMSRIDNPEETEAAGSKEMRSLPPITTRKHRRRKRSALLPSAAAKL 60
Query: 61 AGDWTPSLGAISEDNVVLVVMERKKNEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDF 120
A DW PSLGAISED VVLVVMER+K++++T E ERSVKRKS SR+G++RGVHGRNNSNDF
Sbjct: 61 AADWKPSLGAISEDKVVLVVMEREKSDEQTTELERSVKRKSRSRDGESRGVHGRNNSNDF 120
Query: 121 --RRSPAAIPVVIPAFSPTPFLF 140
R+SP+AIPVVIPAFSP PFLF
Sbjct: 121 SLRQSPSAIPVVIPAFSPAPFLF 143
BLAST of Csor.00g025210 vs. TAIR 10
Match:
AT5G54585.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 56.6 bits (135), Expect = 1.8e-08
Identity = 47/140 (33.57%), Postives = 67/140 (47.86%), Query Frame = 0
Query: 1 MKFLPEFVSCCVPVSVSRMENSEATEAPGAEEIRSLAPITTRIQRRRRRGALYTSAAKMA 60
MKFL E V C + + + A A++ S T QRRRR+
Sbjct: 1 MKFLLELVVPCF-----GSQQFQESAASTADDSVSDETQTLMKQRRRRKRVRVAGQPGQV 60
Query: 61 GDWTPSLGAISEDNVVLVVMERKKNEDRTAESERSVKRKSGSRNGKARGVHGRNNSNDFR 120
+W PSL ISE+ + + +KNE++ +S G + ++ G H R S+DF
Sbjct: 61 AEWRPSLSVISENKPAITKIS-EKNEEKKKVRRKSEGNGGGDASSRSGGGHIRFRSDDFG 120
Query: 121 RSPAAIPVVIPAFSPTPFLF 141
R+ A VIPAFSPTPF+F
Sbjct: 121 RN--AFEPVIPAFSPTPFMF 132
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAG6600756.1 | 7.97e-90 | 100.00 | hypothetical protein SDJN03_05989, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_023526044.1 | 2.67e-88 | 98.57 | uncharacterized protein LOC111789638 [Cucurbita pepo subsp. pepo] | [more] |
| XP_022942037.1 | 6.29e-87 | 97.14 | uncharacterized protein LOC111447225 [Cucurbita moschata] | [more] |
| XP_022992846.1 | 2.99e-85 | 95.71 | uncharacterized protein LOC111489053 [Cucurbita maxima] | [more] |
| XP_022932132.1 | 1.75e-68 | 79.29 | uncharacterized protein LOC111438455 [Cucurbita moschata] >XP_023520436.1 unchar... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1FP47 | 3.05e-87 | 97.14 | uncharacterized protein LOC111447225 OS=Cucurbita moschata OX=3662 GN=LOC1114472... | [more] |
| A0A6J1JUN0 | 1.45e-85 | 95.71 | uncharacterized protein LOC111489053 OS=Cucurbita maxima OX=3661 GN=LOC111489053... | [more] |
| A0A6J1EVT0 | 8.50e-69 | 79.29 | uncharacterized protein LOC111438455 OS=Cucurbita moschata OX=3662 GN=LOC1114384... | [more] |
| A0A6J1JD62 | 5.72e-67 | 77.86 | uncharacterized protein LOC111483313 OS=Cucurbita maxima OX=3661 GN=LOC111483313... | [more] |
| A0A0A0L6G1 | 1.29e-59 | 72.73 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G094500 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G54585.1 | 1.8e-08 | 33.57 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... | [more] |
