Csor.00g024770 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g024770
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	GYF domain-containing protein
Location	Csor_Chr04: 4667665 .. 4668267 (-)
RNA-Seq Expression	Csor.00g024770
Synteny	Csor.00g024770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGAAGAATGTTTGATTGGCATGCAAACTATTTCAGAGAAGCAGCAACACTTCGAGGTATCTACTTGTAAAGATTTTGCTCAAAAATCTTTTATCTCAGCTGTAGAATTTCAAACTCATGAAGAGCAGCATCAACCTATTCTGCCAAAGGAGAAAGCATGTAAAGGTTTTGCTACAAAATCATGCATCCCAGCAGCAGAATTTCAACCTCATAAAGAGCAGCATCAATCCATTCTACCAAAGAAACATGCATATTCCAAACCATTGCTTTCCAGCATCAAAAGGCAAAGTGAGTATATCAATATTCAGAAATCAAAGTTCAAAAGCAAAAGGGCTTCTGAAGTAGAGTTGATCGAGCTAAGCGATAACGAGGATTTGAAAGCTGAAGATAAAATGCAGACTTCAGAGAATCCAAATTTCTCCCTGTGGTATTGTGCAAGTCCTCAAGGGGAGACAAGGGGACCCTTGCCACTGTCATTACTGAAGCAATGGAGGGACCGAAGCTCATTTGAGTTGAAATGTAAAGTTTGGAAGAATGGTCAGAGCTCGCAAGAGGGCATCCCTTTGAGCGATGCCATTAGGTTGTTTTTCCCTGAATAG

mRNA sequence

ATGGTAGAAGAATGTTTGATTGGCATGCAAACTATTTCAGAGAAGCAGCAACACTTCGAGGTATCTACTTGTAAAGATTTTGCTCAAAAATCTTTTATCTCAGCTGTAGAATTTCAAACTCATGAAGAGCAGCATCAACCTATTCTGCCAAAGGAGAAAGCATGTAAAGGTTTTGCTACAAAATCATGCATCCCAGCAGCAGAATTTCAACCTCATAAAGAGCAGCATCAATCCATTCTACCAAAGAAACATGCATATTCCAAACCATTGCTTTCCAGCATCAAAAGGCAAAGTGAGTATATCAATATTCAGAAATCAAAGTTCAAAAGCAAAAGGGCTTCTGAAGTAGAGTTGATCGAGCTAAGCGATAACGAGGATTTGAAAGCTGAAGATAAAATGCAGACTTCAGAGAATCCAAATTTCTCCCTGTGGTATTGTGCAAGTCCTCAAGGGGAGACAAGGGGACCCTTGCCACTGTCATTACTGAAGCAATGGAGGGACCGAAGCTCATTTGAGTTGAAATGTAAAGTTTGGAAGAATGGTCAGAGCTCGCAAGAGGGCATCCCTTTGAGCGATGCCATTAGGTTGTTTTTCCCTGAATAG

Coding sequence (CDS)

ATGGTAGAAGAATGTTTGATTGGCATGCAAACTATTTCAGAGAAGCAGCAACACTTCGAGGTATCTACTTGTAAAGATTTTGCTCAAAAATCTTTTATCTCAGCTGTAGAATTTCAAACTCATGAAGAGCAGCATCAACCTATTCTGCCAAAGGAGAAAGCATGTAAAGGTTTTGCTACAAAATCATGCATCCCAGCAGCAGAATTTCAACCTCATAAAGAGCAGCATCAATCCATTCTACCAAAGAAACATGCATATTCCAAACCATTGCTTTCCAGCATCAAAAGGCAAAGTGAGTATATCAATATTCAGAAATCAAAGTTCAAAAGCAAAAGGGCTTCTGAAGTAGAGTTGATCGAGCTAAGCGATAACGAGGATTTGAAAGCTGAAGATAAAATGCAGACTTCAGAGAATCCAAATTTCTCCCTGTGGTATTGTGCAAGTCCTCAAGGGGAGACAAGGGGACCCTTGCCACTGTCATTACTGAAGCAATGGAGGGACCGAAGCTCATTTGAGTTGAAATGTAAAGTTTGGAAGAATGGTCAGAGCTCGCAAGAGGGCATCCCTTTGAGCGATGCCATTAGGTTGTTTTTCCCTGAATAG

Protein sequence

MVEECLIGMQTISEKQQHFEVSTCKDFAQKSFISAVEFQTHEEQHQPILPKEKACKGFATKSCIPAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIELSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKNGQSSQEGIPLSDAIRLFFPE

Homology

[Close]

BLAST of Csor.00g024770 vs. NCBI nr
Match: KAG6600712.1 (hypothetical protein SDJN03_05945, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 404 bits (1039), Expect = 2.72e-142
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MVEECLIGMQTISEKQQHFEVSTCKDFAQKSFISAVEFQTHEEQHQPILPKEKACKGFAT 60
           MVEECLIGMQTISEKQQHFEVSTCKDFAQKSFISAVEFQTHEEQHQPILPKEKACKGFAT
Sbjct: 1   MVEECLIGMQTISEKQQHFEVSTCKDFAQKSFISAVEFQTHEEQHQPILPKEKACKGFAT 60

Query: 61  KSCIPAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIE 120
           KSCIPAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIE
Sbjct: 61  KSCIPAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIE 120

Query: 121 LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN 180
           LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN
Sbjct: 121 LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN 180

Query: 181 GQSSQEGIPLSDAIRLFFPE 200
           GQSSQEGIPLSDAIRLFFPE
Sbjct: 181 GQSSQEGIPLSDAIRLFFPE 200

[Close]

BLAST of Csor.00g024770 vs. NCBI nr
Match: XP_023539109.1 (uncharacterized protein At5g08430-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 401 bits (1031), Expect = 3.98e-133
Identity = 197/200 (98.50%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MVEECLIGMQTISEKQQHFEVSTCKDFAQKSFISAVEFQTHEEQHQPILPKEKACKGFAT 60
           MVEECLIGMQTISEKQQHFEVSTCKDFAQKS+ISAVEFQTHEEQHQP+LPKEKACKGFAT
Sbjct: 574 MVEECLIGMQTISEKQQHFEVSTCKDFAQKSYISAVEFQTHEEQHQPLLPKEKACKGFAT 633

Query: 61  KSCIPAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIE 120
           KSCIPAAEFQPH+EQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIE
Sbjct: 634 KSCIPAAEFQPHREQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIE 693

Query: 121 LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN 180
           LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN
Sbjct: 694 LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN 753

Query: 181 GQSSQEGIPLSDAIRLFFPE 200
           GQSSQEGIPLSDAIRLFFPE
Sbjct: 754 GQSSQEGIPLSDAIRLFFPE 773

[Close]

BLAST of Csor.00g024770 vs. NCBI nr
Match: XP_022942556.1 (uncharacterized protein At5g08430-like [Cucurbita moschata])

HSP 1 Score: 400 bits (1029), Expect = 7.95e-133
Identity = 197/200 (98.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MVEECLIGMQTISEKQQHFEVSTCKDFAQKSFISAVEFQTHEEQHQPILPKEKACKGFAT 60
           MVEECLIGMQTISEKQQHFEVSTCKDFAQKS+ISAVEFQTHE+QHQPILPKEK CKGFAT
Sbjct: 574 MVEECLIGMQTISEKQQHFEVSTCKDFAQKSYISAVEFQTHEQQHQPILPKEKVCKGFAT 633

Query: 61  KSCIPAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIE 120
           KSCIPAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIE
Sbjct: 634 KSCIPAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIE 693

Query: 121 LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN 180
           LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN
Sbjct: 694 LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN 753

Query: 181 GQSSQEGIPLSDAIRLFFPE 200
           GQSSQEGIPLSDAIRLFFPE
Sbjct: 754 GQSSQEGIPLSDAIRLFFPE 773

[Close]

BLAST of Csor.00g024770 vs. NCBI nr
Match: KAG7031352.1 (hypothetical protein SDJN02_05392, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 399 bits (1024), Expect = 1.75e-131
Identity = 198/200 (99.00%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MVEECLIGMQTISEKQQHFEVSTCKDFAQKSFISAVEFQTHEEQHQPILPKEKACKGFAT 60
           MVEECLIGMQTISEKQQHFEVSTCKDFAQKSFISAVEFQTHEEQHQPILPKEKACK FAT
Sbjct: 627 MVEECLIGMQTISEKQQHFEVSTCKDFAQKSFISAVEFQTHEEQHQPILPKEKACKDFAT 686

Query: 61  KSCIPAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIE 120
           KSCI AAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIE
Sbjct: 687 KSCIAAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIE 746

Query: 121 LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN 180
           LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN
Sbjct: 747 LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN 806

Query: 181 GQSSQEGIPLSDAIRLFFPE 200
           GQSSQEGIPLSDAIRLFFPE
Sbjct: 807 GQSSQEGIPLSDAIRLFFPE 826

[Close]

BLAST of Csor.00g024770 vs. NCBI nr
Match: XP_022984438.1 (uncharacterized protein At5g08430-like [Cucurbita maxima])

HSP 1 Score: 318 bits (816), Expect = 2.48e-101
Identity = 165/200 (82.50%), Postives = 167/200 (83.50%), Query Frame = 0


Query: 1   MVEECLIGMQTISEKQQHFEVSTCKDFAQKSFISAVEFQTHEEQHQPILPKEKACKGFAT 60
           MVEECLIGMQTISEKQQHFEVSTCK                               GFA 
Sbjct: 574 MVEECLIGMQTISEKQQHFEVSTCK-------------------------------GFAK 633

Query: 61  KSCIPAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIE 120
           KSC+ AAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRAS+VELIE
Sbjct: 634 KSCVSAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASDVELIE 693

Query: 121 LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN 180
           LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN
Sbjct: 694 LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN 742

Query: 181 GQSSQEGIPLSDAIRLFFPE 200
           GQSSQEGIPLSDAIRLFFPE
Sbjct: 754 GQSSQEGIPLSDAIRLFFPE 742

[Close]

BLAST of Csor.00g024770 vs. ExPASy TrEMBL
Match: A0A6J1FP67 (uncharacterized protein At5g08430-like OS=Cucurbita moschata OX=3662 GN=LOC111447554 PE=4 SV=1)

HSP 1 Score: 400 bits (1029), Expect = 3.85e-133
Identity = 197/200 (98.50%), Postives = 199/200 (99.50%), Query Frame = 0


Query: 1   MVEECLIGMQTISEKQQHFEVSTCKDFAQKSFISAVEFQTHEEQHQPILPKEKACKGFAT 60
           MVEECLIGMQTISEKQQHFEVSTCKDFAQKS+ISAVEFQTHE+QHQPILPKEK CKGFAT
Sbjct: 574 MVEECLIGMQTISEKQQHFEVSTCKDFAQKSYISAVEFQTHEQQHQPILPKEKVCKGFAT 633

Query: 61  KSCIPAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIE 120
           KSCIPAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIE
Sbjct: 634 KSCIPAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIE 693

Query: 121 LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN 180
           LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN
Sbjct: 694 LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN 753

Query: 181 GQSSQEGIPLSDAIRLFFPE 200
           GQSSQEGIPLSDAIRLFFPE
Sbjct: 754 GQSSQEGIPLSDAIRLFFPE 773

[Close]

BLAST of Csor.00g024770 vs. ExPASy TrEMBL
Match: A0A6J1JAH4 (uncharacterized protein At5g08430-like OS=Cucurbita maxima OX=3661 GN=LOC111482736 PE=4 SV=1)

HSP 1 Score: 318 bits (816), Expect = 1.20e-101
Identity = 165/200 (82.50%), Postives = 167/200 (83.50%), Query Frame = 0


Query: 1   MVEECLIGMQTISEKQQHFEVSTCKDFAQKSFISAVEFQTHEEQHQPILPKEKACKGFAT 60
           MVEECLIGMQTISEKQQHFEVSTCK                               GFA 
Sbjct: 574 MVEECLIGMQTISEKQQHFEVSTCK-------------------------------GFAK 633

Query: 61  KSCIPAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIE 120
           KSC+ AAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRAS+VELIE
Sbjct: 634 KSCVSAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASDVELIE 693

Query: 121 LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN 180
           LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN
Sbjct: 694 LSDNEDLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN 742

Query: 181 GQSSQEGIPLSDAIRLFFPE 200
           GQSSQEGIPLSDAIRLFFPE
Sbjct: 754 GQSSQEGIPLSDAIRLFFPE 742

[Close]

BLAST of Csor.00g024770 vs. ExPASy TrEMBL
Match: A0A5D3BW19 (Zinc finger CCCH domain-containing protein 19-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G001240 PE=4 SV=1)

HSP 1 Score: 210 bits (535), Expect = 4.85e-66
Identity = 118/203 (58.13%), Postives = 136/203 (67.00%), Query Frame = 0


Query: 2   VEECLIGMQTISEKQQHFEVSTCKDFAQKSFISAVEFQTHEEQHQPILPKEKACKGFATK 61
           VEECLIG   ISEKQQHF+VS+C+DFA++S ISA EFQ   EQHQ ILPKE  C      
Sbjct: 17  VEECLIGEPNISEKQQHFKVSSCEDFAKESCISATEFQADGEQHQSILPKENVC------ 76

Query: 62  SCIPAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIEL 121
                                    SK L SS     E I IQ+SK K+K A+EV+LIEL
Sbjct: 77  -------------------------SKTLPSSNNIPIESIKIQESKSKNKIATEVQLIEL 136

Query: 122 SDNE----DLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKV 181
           SD++    DLK  +K +  ENPNFS+WYCASPQGETRGPLP+SLLKQWRD S+FELKCKV
Sbjct: 137 SDDDNEDGDLKVAEKKRNLENPNFSMWYCASPQGETRGPLPMSLLKQWRDSSAFELKCKV 188

Query: 182 WKNGQSSQEGIPLSDAIRLFFPE 200
           WK+ QSSQE + LSDAIRL FPE
Sbjct: 197 WKSDQSSQEAMLLSDAIRLLFPE 188

[Close]

BLAST of Csor.00g024770 vs. ExPASy TrEMBL
Match: A0A0A0L6Q8 (GYF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110690 PE=4 SV=1)

HSP 1 Score: 209 bits (531), Expect = 7.31e-65
Identity = 120/200 (60.00%), Postives = 135/200 (67.50%), Query Frame = 0


Query: 2   VEECLIGMQTISEKQQHFEVSTCKDFAQKSFISAVEFQTHEEQHQPILPKEKACKGFATK 61
           VEE LIG   ISEKQQHFEVSTC+DFA++S                              
Sbjct: 61  VEESLIGEPNISEKQQHFEVSTCEDFAKES------------------------------ 120

Query: 62  SCIPAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIEL 121
            CI AAEFQ H EQHQSILPKK+  SK L SS     E I IQ+SK K+K  SEV+LIEL
Sbjct: 121 -CISAAEFQAHGEQHQSILPKKNVCSKTLPSSNNIPIESIKIQESKAKNKICSEVQLIEL 180

Query: 122 SDNEDLKAEDKM-QTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN 181
           SD +D     K+ + SENPNFS+WYCASPQGETRGPLP+SLLKQW+D S+FELKCKVWK+
Sbjct: 181 SDVDDEDDNLKVAKNSENPNFSMWYCASPQGETRGPLPMSLLKQWKDSSAFELKCKVWKS 229

Query: 182 GQSSQEGIPLSDAIRLFFPE 200
            QSSQE I LSDAIRL FPE
Sbjct: 241 DQSSQEAILLSDAIRLLFPE 229

[Close]

BLAST of Csor.00g024770 vs. ExPASy TrEMBL
Match: A0A6J1C6N4 (uncharacterized protein At5g08430-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008459 PE=4 SV=1)

HSP 1 Score: 219 bits (557), Expect = 2.41e-63
Identity = 119/200 (59.50%), Postives = 138/200 (69.00%), Query Frame = 0


Query: 2   VEECLIGMQTISEKQQHFEVSTCKDFAQKSFISAVEFQTHEEQHQPILPKEKACKGFATK 61
           VEEC +G+ TISEKQQHF+V TCKDFA+KS                              
Sbjct: 617 VEECQVGVPTISEKQQHFDVPTCKDFAKKS------------------------------ 676

Query: 62  SCIPAAEFQPHKEQHQSILPKKHAYSKPLLSSIKRQSEYINIQKSKFKSKRASEVELIEL 121
            CI AA+ Q H+EQHQSILPK+H  S+ L+S   +Q E   IQ+SK KS+  SEV+LIEL
Sbjct: 677 -CISAAKSQTHQEQHQSILPKEHPCSETLVSCTSKQDEATVIQESKLKSEGPSEVQLIEL 736

Query: 122 SDNED-LKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWRDRSSFELKCKVWKN 181
           SD++  L+ EDK Q SENPN  +WYCASPQGETRGPLPLSLLKQWRD S+FELKCKVWK+
Sbjct: 737 SDDDGHLRVEDKKQNSENPNCPMWYCASPQGETRGPLPLSLLKQWRDSSAFELKCKVWKS 785

Query: 182 GQSSQEGIPLSDAIRLFFPE 200
           GQSS E I LSDAIRL FPE
Sbjct: 797 GQSSAEAILLSDAIRLLFPE 785

[Close]

BLAST of Csor.00g024770 vs. TAIR 10
Match: AT5G08430.1 (SWIB/MDM2 domain;Plus-3;GYF )

HSP 1 Score: 54.7 bits (130), Expect = 1.0e-07
Identity = 31/90 (34.44%), Postives = 44/90 (48.89%), Query Frame = 0


Query: 117 ELIELSDNE----------DLKAEDKMQTSENPNFSLWYCASPQGETRGPLPLSLLKQWR 176
           E+IELSD++          D K ED    S +     W    PQG  +GP  L+ LK W 
Sbjct: 463 EVIELSDDDEDDNGDGETLDPKVEDVRVLSYDKEKLNWLYKDPQGLVQGPFSLTQLKAWS 522

Query: 177 DRSSFELKCKVWKNGQSSQEGIPLSDAIRL 197
           D   F  + +VW  G+S +  + L+D +RL
Sbjct: 523 DAEYFTKQFRVWMTGESMESAVLLTDVLRL 552

[Close]

BLAST of Csor.00g024770 vs. TAIR 10
Match: AT5G23480.1 (SWIB/MDM2 domain;Plus-3;GYF )

HSP 1 Score: 50.8 bits (120), Expect = 1.4e-06
Identity = 33/95 (34.74%), Postives = 49/95 (51.58%), Query Frame = 0


Query: 95  KRQSEYINIQKSKFKSKRASEVELIELSDNEDLKAEDK---MQTSENPNFSLWYCASPQG 154
           + QS    I  S      ++ +E+IELSD++D   +DK      S +P   +W+   P+G
Sbjct: 464 QHQSSTPVIDLSNKTQAHSNPIEIIELSDDDDDDEKDKNDQAYQSYDPKKVMWFYEYPKG 523

Query: 155 ETRGPLPLSLLKQWRDRSSF--ELKCKVWKNGQSS 185
           +T GP  L+ LK W D   F      KVWK G+S+
Sbjct: 524 KTHGPFSLTDLKTWSDEEYFVGVPDFKVWKTGESA 558

The following BLAST results are available for this feature:

BLAST of Csor.00g024770 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g024770 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600712.1	2.72e-142	100.00	hypothetical protein SDJN03_05945, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023539109.1	3.98e-133	98.50	uncharacterized protein At5g08430-like [Cucurbita pepo subsp. pepo]	[more]
XP_022942556.1	7.95e-133	98.50	uncharacterized protein At5g08430-like [Cucurbita moschata]	[more]
KAG7031352.1	1.75e-131	99.00	hypothetical protein SDJN02_05392, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022984438.1	2.48e-101	82.50	uncharacterized protein At5g08430-like [Cucurbita maxima]	[more]

BLAST of Csor.00g024770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FP67	3.85e-133	98.50	uncharacterized protein At5g08430-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1JAH4	1.20e-101	82.50	uncharacterized protein At5g08430-like OS=Cucurbita maxima OX=3661 GN=LOC1114827...	[more]
A0A5D3BW19	4.85e-66	58.13	Zinc finger CCCH domain-containing protein 19-like OS=Cucumis melo var. makuwa O...	[more]
A0A0A0L6Q8	7.31e-65	60.00	GYF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110690 PE=4 SV...	[more]
A0A6J1C6N4	2.41e-63	59.50	uncharacterized protein At5g08430-like isoform X2 OS=Momordica charantia OX=3673...	[more]

BLAST of Csor.00g024770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08430.1	1.0e-07	34.44	SWIB/MDM2 domain;Plus-3;GYF	[more]
AT5G23480.1	1.4e-06	34.74	SWIB/MDM2 domain;Plus-3;GYF	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035445	GYF-like domain superfamily	GENE3D	3.30.1490.40		coord: 143..200 e-value: 4.4E-17 score: 63.5
IPR035445	GYF-like domain superfamily	SUPERFAMILY	55277	GYF domain	coord: 134..196
None	No IPR available	PANTHER	PTHR46851	OS01G0884500 PROTEIN	coord: 59..196
None	No IPR available	PANTHER	PTHR46851:SF11	OS01G0884500 PROTEIN	coord: 59..196
IPR003169	GYF domain	PROSITE	PS50829	GYF	coord: 141..195 score: 8.651098

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g024770.m01	Csor.00g024770.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding