Csor.00g024490 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g024490
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Rhamnogalacturonan endolyase
Location	Csor_Chr04: 4449550 .. 4453490 (+)
RNA-Seq Expression	Csor.00g024490
Synteny	Csor.00g024490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCGTTTTCTTCTTCTTCTTTCCTCTCCACCACAGTACCAATCGGATTCCGACCACCCCACTAAGGTAATTATTATATTCATCTACATTTTATTTATTTTCTACAAAAAAGAAAAATACAATTTTTACCCATTCAACTTTGACCTGCTGGCCTCTGCTTCTTCTGCAAGATGAATGCATGCAGAGCCGAACCAGAGGTTGAAGACGACGGGAACAACCAATATAGTTTTTTTTAAAAAAAAAAAAAAAAAATTTAACTTTGTTAAATGTACAGTAAATGTGGAATTATGTCGGCAGTCATATATTATTCTGTCACGTTTGTATAATTTAATTTAATCTTCACATATTTGATCTTATAAAGGAGAATGTTCGATTTATGGCCACAGGAATTTATACTGTTTTTTTTTTTTTTTTTTCTAATATTATTATTATTTTTTTTAACCCCACATTGTCACGGGACAAAGTGCTGGTGCTGTTTGCTTTTCGGTCTGTGAAATACGTGGACCAATGAGAAACAGACAAGTGTCGGTGAGACGGTTTTACTTTTACTGTTCTTCCGAAAAGAAGATTTCAGTTAGTTTGTTTGTTTGTTTATTTATTGACTTTCAGTATTTATTTGTTTCAACTTCTAAATATATTCTCTAATTTATCTTTTAATTTAAAAAAAAGATCAAATTTGAAAGTTTAATTAATATATAGTAAATTAAATATTGGCTCTCTAGTAGGAGAAACTTAATGGACATGAACATCAACAATTCTTCGGGGCAATTCAAAGTCAGACTACAAAGAAGTGGTGGAAATGTAAGTAATTATTACCAATTCATCTTCATTCCCTTAAAACAATTAAATTTATTGGCATCCAAAAGGCAACACCTTTGTATTATTATGATTATTATTCAGGTCGTGATGGATAATGGTATTGTCCAAGTTACTCTGTCCACCCCAGATGGTGACGTGGTTGGATTGAGCTATAATGGAGTCGATAACATTCTGGACACTAAAACCGAAGCGCCGAACAGAGGGTAAGTAGAACCATGTATATATATATATATGGCTTAAACAGGATTGATTTGGATTACTTGAGGGCTAAGTGTTGTGTTTCACAGCTACTGGGACGCCGTATGGAACAACCCAAACGAACCCATTAACACTGACAGGTATAAACCAAATCCCATTCTCCCTTTTGGCTTCTAAATTCTAATCATAAAAAATATTGTTGTCCCCATTTAGATTACTAGGAACCGCGTTTAAAGTGATAGTATCCACCGACGAGCAACTGGAAATCTCGTTTGTCAAAACATGGAGCGTTGCAGTTGGGAACAAGAACGCCCCTGTAAATGTAGACAAAAGGTGGGGAGAATTTTGTGACTTTTATAAACCAAGATGTGTGGAAAATGACGTCGTTTTTGCTTCCTTTTGGCTCTGCAGGTTCGTGTTGCTGAGAGGAAGTTCTGGGTTTTATACGTATGCCGTATTCGAGAGGCTGACGGGGTGGCCGGAGATTGAAATGGATCAAGTTAGGATCGTTTTCAGACCTCAGAAAAAAATGTAGAACAATTAAAAAAAAAAAACCCATTTCGGATTCTGTTTTTTTGCCTAAATTCTGAGTTTAGTTTTTGATATAAAATGGTTTGGGTGTTTAGGTTTGATTACATGGCTGTATCGGACAGTTGGCAGAGAGTGATGCCGACAATGGACGACCGCAATAATGGTGATCCATTGCAATATCCTGAGGCTGTTCTTTTGACCAATCCTGCCAATGGGAAACTCAGAGGAGAGGTATTTTTACCATTTATTTCTGAAAAAATTCATTTGATATCTACGCACACACATTTGAGGCTTTGAATTGGGTTCATTGTTGGATTCAACACATTGGCTTTGATGATCAAAATCTGGGTTTGAAGTGACGCCATTGATGAGAAATTGAGAATGATGAGTGATGTGTGAGTGCAGGTAGATGACAAGTACATGTACTCAATAGAGGACAAGGACAACCTACTTCACGGCTGGATCTCCAGAAATCCACCGACTGGATTCTGGATGATCACTCCTAGTGACGAGTTCCGCGTCGCCGGTCCGGTCAAGCAGGATCTGACCTCCCACGCCGGCCCCATCACTCTCTCCGTAAGTTCCCGTCTAACCCATTTCCATTTCCATTTCCATCCACCACCTGTTTCTAACAATACCTTCACTCTAATTTCTACCACACAGATGTTCGCTAGCACCCACTACGCTGGAACGGATGTGGGCATGAAATTTGCAGAAGGAGAGCCTTGGAAGAAGGTCTTCGGCCCTGTATTTGTCTATCTCAACTCTGCTTCCCCTAAGGAGGATTACCGTTCTCTATGGCAAGATGCCAAACAACAGGTCCCCCCTAATTCTCTCCTTCTCTCTATATCTCTTTTAATGCTGAATTTAGAGTAATTCATTCAACTGACATGCATCAAATTACCACAGCTGGCAACGGAAATCAGTAAGTGGCCCTATACTTTTCCTCAATCAGAAGACTTCCCTTCTTCTGCCCAAAGAGGGAGCGTCGCCGGCCGGTTACTAATCCGTGATGGGTATTCCTCTCTCTCGCTCTATACAAATTTGAGTCTCCAATTGTGAATTGAATATGCGTATGCGTATTGTTTCCATCAGGTCTATCAGCGACAGACTTTTGCGTGCGAGTAATGCTTTCGTTGGATTGGCATTGCCTGGTCCTGTGGGATCTTGGCAAAGGGAAAGCAAGGTAATCCTTTTTTAAATTTCCATTCCCCAAAGAGTTCTCAAACCAAGACGTGCTTGCTAATATATTATACTTCCATTCTTGTAGGGCTATCAATTCTGGACTCAAGCTGACAGTCACGGCAGCTTCTTAATCAATAACGTCCGAGAAGGAGTTTATAATCTTTATGCTTTTGTTCCTGGCTTTATTGGAGACTACAAGTACGAGGGAAATATAACAATCAAGGCTGGTAAGTAATAAACAACTTTCTCTCCGTCACATTTCATAAAAAAAAAAAAAACAAACCAAACCAAGCTAAGCTAAGCTCTTGGTTTTGTAGGGTCTAAAATTAAATTGGATGAGATGGTGTTTGATCCGCCGAGACAGGGCCCAACCATCTGGGAGATCGGCATTCCCGACCGCACAGCAGCGGAGTTTTATGTGCCCGACCCTTTTCCGACTCTCATGAATAAACTATACATTGACCATGATGACAAGTCGGTTTTAAAAATTCTGTTCCACCCATTCTGTTTTGTTTTGTTTTAATCAAAATTTAATGATGTTGAGAAGTTGGGTTTGATTAACAGGTTCAGACAATATGGGTTGTGGGAACGTTATGCGGCTATGTATCCAAATAATGATCTTGTGTTTACTGTTGGTGTGGATAATTATACCCAGGACTGGTTCTATGCGCATGTTACCAGGTAAGTTTGGGGCTTTTCTTTTACATTTAGTTAGTGTTTCAGGGACTGATTTAAGAGATGTTTCTTGTTATCTTATGCAGGGATGTGGGGAATCAAACATACGAAGCAACCACATGGGAGGTCAGATTTTCATTGCAATCTGTGAACCAAACGGCAAATTACACGTTGCAAATTGCATTGGCATCTGCTGCTGATTGCGAGTTACAGGTATTAGAGTGTGTGTGCAGAGTAGTGTTTTAGTGAAAGATTAAACTAATACTCTGTTATGTTGTGGATTTGAAGGTTCGGTTAAACGATAAAACGTCGAGCCAACCCGGGTTTACGACAGGAAGGATCGGAAGGGACAACGCAATTGCAAGGCATGGGATTCATGGGCTTTACTGGTTATACTCGGTTCCTTTCCCTGGCACTCAGTTTCTGAAAGGGAACAACTCCATGTATTTCACTCAGGCAAGAAGCCACGGCCCTTTCCAAGGTCTCATGTATGACTACGTTCGACTCGAAGCTCCACCTCGAACATAA

mRNA sequence

ATGGCTGCCGTTTTCTTCTTCTTCTTTCCTCTCCACCACAGTACCAATCGGATTCCGACCACCCCACTAAGGAGAAACTTAATGGACATGAACATCAACAATTCTTCGGGGCAATTCAAAGTCAGACTACAAAGAAGTGGTGGAAATGTCGTGATGGATAATGGTATTGTCCAAGTTACTCTGTCCACCCCAGATGGTGACGTGGTTGGATTGAGCTATAATGGAGTCGATAACATTCTGGACACTAAAACCGAAGCGCCGAACAGAGGCTACTGGGACGCCGTATGGAACAACCCAAACGAACCCATTAACACTGACAGATTACTAGGAACCGCGTTTAAAGTGATAGTATCCACCGACGAGCAACTGGAAATCTCGTTTGTCAAAACATGGAGCGTTGCAGTTGGGAACAAGAACGCCCCTGTAAATGTAGACAAAAGGTTCGTGTTGCTGAGAGGAAGTTCTGGGTTTTATACGTATGCCGTATTCGAGAGGCTGACGGGGTGGCCGGAGATTGAAATGGATCAAGTTAGGATCGTTTTCAGACCTCAGAAAAAAATGTTTGATTACATGGCTGTATCGGACAGTTGGCAGAGAGTGATGCCGACAATGGACGACCGCAATAATGGTGATCCATTGCAATATCCTGAGGCTGTTCTTTTGACCAATCCTGCCAATGGGAAACTCAGAGGAGAGGTAGATGACAAGTACATGTACTCAATAGAGGACAAGGACAACCTACTTCACGGCTGGATCTCCAGAAATCCACCGACTGGATTCTGGATGATCACTCCTAGTGACGAGTTCCGCGTCGCCGGTCCGGTCAAGCAGGATCTGACCTCCCACGCCGGCCCCATCACTCTCTCCATGTTCGCTAGCACCCACTACGCTGGAACGGATGTGGGCATGAAATTTGCAGAAGGAGAGCCTTGGAAGAAGGTCTTCGGCCCTGTATTTGTCTATCTCAACTCTGCTTCCCCTAAGGAGGATTACCGTTCTCTATGGCAAGATGCCAAACAACAGCTGGCAACGGAAATCAGTAAGTGGCCCTATACTTTTCCTCAATCAGAAGACTTCCCTTCTTCTGCCCAAAGAGGGAGCGTCGCCGGCCGGTTACTAATCCGTGATGGGTCTATCAGCGACAGACTTTTGCGTGCGAGTAATGCTTTCGTTGGATTGGCATTGCCTGGTCCTGTGGGATCTTGGCAAAGGGAAAGCAAGGGCTATCAATTCTGGACTCAAGCTGACAGTCACGGCAGCTTCTTAATCAATAACGTCCGAGAAGGAGTTTATAATCTTTATGCTTTTGTTCCTGGCTTTATTGGAGACTACAAGTACGAGGGAAATATAACAATCAAGGCTGGGTCTAAAATTAAATTGGATGAGATGGTGTTTGATCCGCCGAGACAGGGCCCAACCATCTGGGAGATCGGCATTCCCGACCGCACAGCAGCGGAGTTTTATGTGCCCGACCCTTTTCCGACTCTCATGAATAAACTATACATTGACCATGATGACAAGTTCAGACAATATGGGTTGTGGGAACGTTATGCGGCTATGTATCCAAATAATGATCTTGTGTTTACTGTTGGTGTGGATAATTATACCCAGGACTGGTTCTATGCGCATGTTACCAGGGATGTGGGGAATCAAACATACGAAGCAACCACATGGGAGGTCAGATTTTCATTGCAATCTGTGAACCAAACGGCAAATTACACGTTGCAAATTGCATTGGCATCTGCTGCTGATTGCGAGTTACAGGTTCGGTTAAACGATAAAACGTCGAGCCAACCCGGGTTTACGACAGGAAGGATCGGAAGGGACAACGCAATTGCAAGGCATGGGATTCATGGGCTTTACTGGTTATACTCGGTTCCTTTCCCTGGCACTCAGTTTCTGAAAGGGAACAACTCCATGTATTTCACTCAGGCAAGAAGCCACGGCCCTTTCCAAGGTCTCATGTATGACTACGTTCGACTCGAAGCTCCACCTCGAACATAA

Coding sequence (CDS)

ATGGCTGCCGTTTTCTTCTTCTTCTTTCCTCTCCACCACAGTACCAATCGGATTCCGACCACCCCACTAAGGAGAAACTTAATGGACATGAACATCAACAATTCTTCGGGGCAATTCAAAGTCAGACTACAAAGAAGTGGTGGAAATGTCGTGATGGATAATGGTATTGTCCAAGTTACTCTGTCCACCCCAGATGGTGACGTGGTTGGATTGAGCTATAATGGAGTCGATAACATTCTGGACACTAAAACCGAAGCGCCGAACAGAGGCTACTGGGACGCCGTATGGAACAACCCAAACGAACCCATTAACACTGACAGATTACTAGGAACCGCGTTTAAAGTGATAGTATCCACCGACGAGCAACTGGAAATCTCGTTTGTCAAAACATGGAGCGTTGCAGTTGGGAACAAGAACGCCCCTGTAAATGTAGACAAAAGGTTCGTGTTGCTGAGAGGAAGTTCTGGGTTTTATACGTATGCCGTATTCGAGAGGCTGACGGGGTGGCCGGAGATTGAAATGGATCAAGTTAGGATCGTTTTCAGACCTCAGAAAAAAATGTTTGATTACATGGCTGTATCGGACAGTTGGCAGAGAGTGATGCCGACAATGGACGACCGCAATAATGGTGATCCATTGCAATATCCTGAGGCTGTTCTTTTGACCAATCCTGCCAATGGGAAACTCAGAGGAGAGGTAGATGACAAGTACATGTACTCAATAGAGGACAAGGACAACCTACTTCACGGCTGGATCTCCAGAAATCCACCGACTGGATTCTGGATGATCACTCCTAGTGACGAGTTCCGCGTCGCCGGTCCGGTCAAGCAGGATCTGACCTCCCACGCCGGCCCCATCACTCTCTCCATGTTCGCTAGCACCCACTACGCTGGAACGGATGTGGGCATGAAATTTGCAGAAGGAGAGCCTTGGAAGAAGGTCTTCGGCCCTGTATTTGTCTATCTCAACTCTGCTTCCCCTAAGGAGGATTACCGTTCTCTATGGCAAGATGCCAAACAACAGCTGGCAACGGAAATCAGTAAGTGGCCCTATACTTTTCCTCAATCAGAAGACTTCCCTTCTTCTGCCCAAAGAGGGAGCGTCGCCGGCCGGTTACTAATCCGTGATGGGTCTATCAGCGACAGACTTTTGCGTGCGAGTAATGCTTTCGTTGGATTGGCATTGCCTGGTCCTGTGGGATCTTGGCAAAGGGAAAGCAAGGGCTATCAATTCTGGACTCAAGCTGACAGTCACGGCAGCTTCTTAATCAATAACGTCCGAGAAGGAGTTTATAATCTTTATGCTTTTGTTCCTGGCTTTATTGGAGACTACAAGTACGAGGGAAATATAACAATCAAGGCTGGGTCTAAAATTAAATTGGATGAGATGGTGTTTGATCCGCCGAGACAGGGCCCAACCATCTGGGAGATCGGCATTCCCGACCGCACAGCAGCGGAGTTTTATGTGCCCGACCCTTTTCCGACTCTCATGAATAAACTATACATTGACCATGATGACAAGTTCAGACAATATGGGTTGTGGGAACGTTATGCGGCTATGTATCCAAATAATGATCTTGTGTTTACTGTTGGTGTGGATAATTATACCCAGGACTGGTTCTATGCGCATGTTACCAGGGATGTGGGGAATCAAACATACGAAGCAACCACATGGGAGGTCAGATTTTCATTGCAATCTGTGAACCAAACGGCAAATTACACGTTGCAAATTGCATTGGCATCTGCTGCTGATTGCGAGTTACAGGTTCGGTTAAACGATAAAACGTCGAGCCAACCCGGGTTTACGACAGGAAGGATCGGAAGGGACAACGCAATTGCAAGGCATGGGATTCATGGGCTTTACTGGTTATACTCGGTTCCTTTCCCTGGCACTCAGTTTCTGAAAGGGAACAACTCCATGTATTTCACTCAGGCAAGAAGCCACGGCCCTTTCCAAGGTCTCATGTATGACTACGTTCGACTCGAAGCTCCACCTCGAACATAA

Protein sequence

MAAVFFFFFPLHHSTNRIPTTPLRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQVTLSTPDGDVVGLSYNGVDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGTAFKVIVSTDEQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPEIEMDQVRIVFRPQKKMFDYMAVSDSWQRVMPTMDDRNNGDPLQYPEAVLLTNPANGKLRGEVDDKYMYSIEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTDVGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFPSSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGSFLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIPDRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWFYAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQPGFTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYVRLEAPPRT

Homology

[Close]

BLAST of Csor.00g024490 vs. ExPASy Swiss-Prot
Match: B0XPA2 (Probable rhamnogalacturonate lyase B OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=rglB PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.0e-21
Identity = 119/467 (25.48%), Postives = 190/467 (40.69%), Query Frame = 0


Query: 153 GSSGFYTYAVFERLTGWPEI-----EMDQVRIVFRPQKKMFDYMAVSDSWQRVMPTMDDR 212
           G +G +   +F RL  + E       + + R +FRP  +++ ++  S+     +P+ +  
Sbjct: 129 GETGLH---MFSRLAYYNETTPFLRNLQEFRTLFRPNTQLWTHLTSSELQTAPLPSKNAV 188

Query: 213 NNGDPLQYPEAVLLTNPANGKLR--GEVDDKYMYSIEDKDNLLHGWI-----SRNPPTGF 272
           +    +Q         P +       E   KY +S + +DN +HG       S     G 
Sbjct: 189 SKQVVVQDATWRFNNTPDDAYYTQFSEYFTKYTFSNQWRDNDVHGLYGDGTNSNGSTYGA 248

Query: 273 WMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTDVGMKFAEGEP-----WKKVF 332
           W++         GP+  DLT     I  +   S H+          EG P     + + F
Sbjct: 249 WLV-----MNTKGPLHSDLT--VDGIVYNYIVSNHH---------GEGTPNITNGFDRTF 308

Query: 333 GPVFVYLNSASPKEDYRSLWQDAKQQLATEIS-KWPYTFPQS-----EDFPSSAQRGSVA 392
           GP F   N     +   S  QD + + A      W   F  S       +  S++RGSV 
Sbjct: 309 GPQFYLFNGG---KGSTSSLQDLRSEAAKLADPSWNAEFYDSIAKHVVGYVPSSKRGSVD 368

Query: 393 GRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRES---KGYQFWTQADSHGSFLINNV 452
           GR+ +  G        ASN    L + G    +Q  S     YQ+WT  D+ G F I+ V
Sbjct: 369 GRIKLPKG--------ASNPIAILTVDGQY--FQDNSVVPSSYQYWTDIDTSGRFRIDRV 428

Query: 453 REGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIPDRTAAE 512
            EG Y L  +  G  GD+  +G +T++AG    + E  +D    G  IW +G PD+++ E
Sbjct: 429 VEGKYRLTVYADGIFGDFVRDG-VTVRAGKTTTVKEK-WDAESAGKEIWRLGTPDKSSGE 488

Query: 513 F---YVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVG-----VDNYTQD 572
           F      DP   L    Y+ +      +G ++ + + +P   + +T+G      D  T  
Sbjct: 489 FRHGVARDPTHPLHPPEYLIY------WGAYD-WQSDFPKG-IDYTIGSSDPATDFNTVH 548

Query: 573 WFYAHVTRDVGNQTYEAT-TWEVRFSL--QSVNQTANYTLQIALASA 583
           W     T D  N  Y  T  W++ FSL  + +  +   TL I LA A
Sbjct: 549 WSVFGPTPDNPNVEYNTTHDWKINFSLTKKQLRNSKKATLTIQLAGA 553

[Close]

BLAST of Csor.00g024490 vs. ExPASy Swiss-Prot
Match: Q4WR79 (Probable rhamnogalacturonate lyase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=rglB PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.0e-21
Identity = 119/467 (25.48%), Postives = 190/467 (40.69%), Query Frame = 0


Query: 153 GSSGFYTYAVFERLTGWPEI-----EMDQVRIVFRPQKKMFDYMAVSDSWQRVMPTMDDR 212
           G +G +   +F RL  + E       + + R +FRP  +++ ++  S+     +P+ +  
Sbjct: 129 GETGLH---MFSRLAYYNETTPFLRNLQEFRTLFRPNTQLWTHLTSSELQTAPLPSKNAV 188

Query: 213 NNGDPLQYPEAVLLTNPANGKLR--GEVDDKYMYSIEDKDNLLHGWI-----SRNPPTGF 272
           +    +Q         P +       E   KY +S + +DN +HG       S     G 
Sbjct: 189 SKQVVVQDATWRFNNTPDDAYYTQFSEYFTKYTFSNQWRDNDVHGLYGDGTNSNGSTYGA 248

Query: 273 WMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTDVGMKFAEGEP-----WKKVF 332
           W++         GP+  DLT     I  +   S H+          EG P     + + F
Sbjct: 249 WLV-----MNTKGPLHSDLT--VDGIVYNYIVSNHH---------GEGTPNITNGFDRTF 308

Query: 333 GPVFVYLNSASPKEDYRSLWQDAKQQLATEIS-KWPYTFPQS-----EDFPSSAQRGSVA 392
           GP F   N     +   S  QD + + A      W   F  S       +  S++RGSV 
Sbjct: 309 GPQFYLFNGG---KGSTSSLQDLRSEAAKLADPSWNAEFYDSIAKHVVGYVPSSKRGSVD 368

Query: 393 GRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRES---KGYQFWTQADSHGSFLINNV 452
           GR+ +  G        ASN    L + G    +Q  S     YQ+WT  D+ G F I+ V
Sbjct: 369 GRIKLPKG--------ASNPIAILTVDGQY--FQDNSVVPSSYQYWTDIDTSGRFRIDRV 428

Query: 453 REGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIPDRTAAE 512
            EG Y L  +  G  GD+  +G +T++AG    + E  +D    G  IW +G PD+++ E
Sbjct: 429 VEGKYRLTVYADGIFGDFVRDG-VTVRAGKTTTVKEK-WDAESAGKEIWRLGTPDKSSGE 488

Query: 513 F---YVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVG-----VDNYTQD 572
           F      DP   L    Y+ +      +G ++ + + +P   + +T+G      D  T  
Sbjct: 489 FRHGVARDPTHPLHPPEYLIY------WGAYD-WQSDFPKG-IDYTIGSSDPATDFNTVH 548

Query: 573 WFYAHVTRDVGNQTYEAT-TWEVRFSL--QSVNQTANYTLQIALASA 583
           W     T D  N  Y  T  W++ FSL  + +  +   TL I LA A
Sbjct: 549 WSVFGPTPDNPNVEYNTTHDWKINFSLTKKQLRNSKKATLTIQLAGA 553

[Close]

BLAST of Csor.00g024490 vs. ExPASy Swiss-Prot
Match: A1D144 (Probable rhamnogalacturonate lyase B OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=rglB PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 3.4e-20
Identity = 116/467 (24.84%), Postives = 187/467 (40.04%), Query Frame = 0


Query: 153 GSSGFYTYAVFERLTGWPEI-----EMDQVRIVFRPQKKMFDYMAVSDSWQRVMPTMDDR 212
           G +G +   +F RL  + E       + + R +FRP  +++ ++  S+     +P+ +  
Sbjct: 129 GETGLH---MFSRLAYYNETTPFLRNLQEFRTLFRPNTQLWTHLTSSELQTAPLPSKNAV 188

Query: 213 NNGDPLQYPEAVLLTNPANGKLR--GEVDDKYMYSIEDKDNLLHGWI-----SRNPPTGF 272
           +    +Q         P +       E   KY +S + +DN +HG       S     G 
Sbjct: 189 SKQVVVQDATWRFNNTPDDAYYTQFSEYFTKYTFSNQWRDNDVHGLYGDGTNSNGSTYGA 248

Query: 273 WMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTDVGMKFAEGEP-----WKKVF 332
           W++         GP+  DLT     I  +   S H+          EG P     + + F
Sbjct: 249 WLV-----MNTKGPLHSDLT--VDGIVYNYIVSNHH---------GEGTPNITNGFDRTF 308

Query: 333 GPVFVYLNSASPKEDYRSLWQDAKQQLATEIS-KWPYTFPQS-----EDFPSSAQRGSVA 392
           GP F   N     +   S  QD + + A      W   F  S       +  S++RGSV 
Sbjct: 309 GPQFYLFNGG---KGSTSSLQDLRSEAAKLADPSWNAEFYDSIAKHVVGYVPSSKRGSVD 368

Query: 393 GRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRES---KGYQFWTQADSHGSFLINNV 452
           GR+ +  G        A+N    L + G    +Q  S     YQ+WT  D+ G F I+ V
Sbjct: 369 GRVKLPKG--------ATNPIAILTVDGQY--FQDNSVVPSSYQYWTDIDTSGKFRIDRV 428

Query: 453 REGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIPDRTAAE 512
            EG Y L  +  G  GD+  +G +T+KAG    + E  +D    G  +W +G PD+++ E
Sbjct: 429 VEGKYRLTVYADGIFGDFVRDG-VTVKAGKTTTVKEK-WDAESAGKEVWRLGTPDKSSGE 488

Query: 513 F---YVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVG-----VDNYTQD 572
           F      DP   L    Y+ +      +G ++  + +    D  + +G      D  T  
Sbjct: 489 FRHGVARDPTHPLHPPEYLIY------WGAYDWQSDLPKGID--YRIGSSDPATDFNTVH 548

Query: 573 WFYAHVTRDVGNQTYEAT-TWEVRFSL--QSVNQTANYTLQIALASA 583
           W     T D  +  Y  T  W++ FSL  + +  +   TL I LA A
Sbjct: 549 WSVFGPTPDNPDVEYNTTHDWKINFSLTKKQLRNSKKATLTIQLAGA 553

[Close]

BLAST of Csor.00g024490 vs. ExPASy Swiss-Prot
Match: Q2U5P7 (Probable rhamnogalacturonate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=rglC PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.2e-14
Identity = 135/600 (22.50%), Postives = 216/600 (36.00%), Query Frame = 0


Query: 31  NINNSSGQFKVRLQRSGGNVVMDNGIVQVTLSTPDGDVVGLSYNGVDNILDTKTEAPNRG 90
           + N ++ +F + L +S G++V      Q  L   DG+       G    LD     P+ G
Sbjct: 31  HFNLANDRFSIALAKSNGHIVDVQLDGQDLLGPVDGNA------GKGPYLDCSC-IPS-G 90

Query: 91  YWDAVWNNPNEPINTDRLLGTAFKVIVSTDEQLEISFVKTWSVAVGNKNAPVNVDKRFVL 150
           +W        E IN     GTA+  +               S      N  ++   ++  
Sbjct: 91  FWTPGSGAHLELINGTDSTGTAYGGLY-------------MSATYAGTNQTLS---QWFF 150

Query: 151 LRG-SSGFYTYAVFERLTGWPEI-----EMDQVRIVFRPQKKMFDYMAVSDSWQRVMPTM 210
           LRG  +G +    F R+T + E       + ++R +FRP   ++ + + SD         
Sbjct: 151 LRGEETGLH---AFSRVTYFNETTPSLRSLGELRTLFRPSTDLWTHFSTSDG-------- 210

Query: 211 DDRNNGDPLQYPEAVLLTNPANGKLRGEVDDKYMYSIED-----------KDNLLHGWIS 270
              N G       + L+   A   +    DD Y+    D           +++ +HG  S
Sbjct: 211 ---NYGPKPLGSNSGLVVQDATTYIGNVTDDPYVSQYSDYFTKYTLAESWRNHDVHGLFS 270

Query: 271 RNPPT------GFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTDVGMKFAE 330
               +      G W++  + E    GP+  DL      I  +   S H+      +    
Sbjct: 271 DGSSSSDGSTFGAWLVHNTVETYYGGPLHSDLV--VDGIVYNYLVSGHHGAPTPNLTHGF 330

Query: 331 GEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQS-----EDFPSS 390
              W    GP F Y N    +     L  DA +    E   W   F  S      +F  S
Sbjct: 331 DRTW----GPQFYYFNRGDSETTLADLRADAAKYADPE---WNAEFYDSIADHIPNFTPS 390

Query: 391 AQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPG---PVGSWQRESKGYQFWTQADSHG 450
             R +  G++ +  G        A    + L+  G    +  +  ES   Q+W + D  G
Sbjct: 391 TGRTTFKGKVSLPKG--------AKRPIIVLSEDGQDFQLNVFNTES--LQYWAEIDKSG 450

Query: 451 SFLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGI 510
           SF I  V EG Y +  +     G +  +    +K+ SK       +     G  IW IGI
Sbjct: 451 SFSIPRVVEGTYRITIYADEIFGWFIQDHVKVLKSQSKDY--SFTWKEESAGKEIWRIGI 510

Query: 511 PDRTAAEF---YVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYT 570
           PD+++ E+   Y PD    L         ++ R Y     Y A +P   + F VG  + +
Sbjct: 511 PDKSSGEYLHGYAPDTSKPL-------QPEQHRIYWGKYDYPADFPEG-INFHVGKSDPS 563

Query: 571 QDWFYAHVT------RDVGNQTY--EATTWEVRFSLQS----VNQTANYTLQIALASAAD 585
           QD  Y H          +  + Y      W V F L +       TA +T+QIA A  A+
Sbjct: 571 QDLNYIHWAFFPSQGNHLRTEPYYDNVNNWTVTFDLTADQLHNTNTATFTVQIAGAKTAN 563

[Close]

BLAST of Csor.00g024490 vs. NCBI nr
Match: KAG6600684.1 (hypothetical protein SDJN03_05917, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1386 bits (3587), Expect = 0.0
Identity = 667/667 (100.00%), Postives = 667/667 (100.00%), Query Frame = 0


Query: 1   MAAVFFFFFPLHHSTNRIPTTPLRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQVT 60
           MAAVFFFFFPLHHSTNRIPTTPLRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQVT
Sbjct: 1   MAAVFFFFFPLHHSTNRIPTTPLRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQVT 60

Query: 61  LSTPDGDVVGLSYNGVDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGTAFKVIVSTD 120
           LSTPDGDVVGLSYNGVDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGTAFKVIVSTD
Sbjct: 61  LSTPDGDVVGLSYNGVDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGTAFKVIVSTD 120

Query: 121 EQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPEIEMDQVRIV 180
           EQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPEIEMDQVRIV
Sbjct: 121 EQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPEIEMDQVRIV 180

Query: 181 FRPQKKMFDYMAVSDSWQRVMPTMDDRNNGDPLQYPEAVLLTNPANGKLRGEVDDKYMYS 240
           FRPQKKMFDYMAVSDSWQRVMPTMDDRNNGDPLQYPEAVLLTNPANGKLRGEVDDKYMYS
Sbjct: 181 FRPQKKMFDYMAVSDSWQRVMPTMDDRNNGDPLQYPEAVLLTNPANGKLRGEVDDKYMYS 240

Query: 241 IEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTD 300
           IEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTD
Sbjct: 241 IEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTD 300

Query: 301 VGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFP 360
           VGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFP
Sbjct: 301 VGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFP 360

Query: 361 SSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGS 420
           SSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGS
Sbjct: 361 SSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGS 420

Query: 421 FLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIP 480
           FLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIP
Sbjct: 421 FLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIP 480

Query: 481 DRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWF 540
           DRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWF
Sbjct: 481 DRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWF 540

Query: 541 YAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQPG 600
           YAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQPG
Sbjct: 541 YAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQPG 600

Query: 601 FTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYVR 660
           FTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYVR
Sbjct: 601 FTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYVR 660

Query: 661 LEAPPRT 667
           LEAPPRT
Sbjct: 661 LEAPPRT 667

[Close]

BLAST of Csor.00g024490 vs. NCBI nr
Match: XP_022942657.1 (probable rhamnogalacturonate lyase B isoform X2 [Cucurbita moschata])

HSP 1 Score: 1368 bits (3542), Expect = 0.0
Identity = 661/667 (99.10%), Postives = 663/667 (99.40%), Query Frame = 0


Query: 1   MAAVFFFFFPLHHSTNRIPTTPLRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQVT 60
           MAAVFFFFFPLHHSTNRIPTTPLRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQVT
Sbjct: 13  MAAVFFFFFPLHHSTNRIPTTPLRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQVT 72

Query: 61  LSTPDGDVVGLSYNGVDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGTAFKVIVSTD 120
           LSTPDGDVVGLSYNG+DNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGT+FKVIVSTD
Sbjct: 73  LSTPDGDVVGLSYNGIDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGTSFKVIVSTD 132

Query: 121 EQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPEIEMDQVRIV 180
           EQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTG PEIEMDQVRIV
Sbjct: 133 EQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGCPEIEMDQVRIV 192

Query: 181 FRPQKKMFDYMAVSDSWQRVMPTMDDRNNGDPLQYPEAVLLTNPANGKLRGEVDDKYMYS 240
           FRPQKKMFDYMAVSDS QRVMPTMDDRNNGDPLQYPEAVLLTNPAN KLRGEVDDKYMYS
Sbjct: 193 FRPQKKMFDYMAVSDSRQRVMPTMDDRNNGDPLQYPEAVLLTNPANEKLRGEVDDKYMYS 252

Query: 241 IEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTD 300
           IEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTD
Sbjct: 253 IEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTD 312

Query: 301 VGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFP 360
           VGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFP
Sbjct: 313 VGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFP 372

Query: 361 SSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGS 420
           SSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGS
Sbjct: 373 SSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGS 432

Query: 421 FLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIP 480
           FLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIP
Sbjct: 433 FLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIP 492

Query: 481 DRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWF 540
           DRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWF
Sbjct: 493 DRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWF 552

Query: 541 YAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQPG 600
           YAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQP 
Sbjct: 553 YAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQPA 612

Query: 601 FTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYVR 660
           FTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYVR
Sbjct: 613 FTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYVR 672

Query: 661 LEAPPRT 667
           LEAPPRT
Sbjct: 673 LEAPPRT 679

[Close]

BLAST of Csor.00g024490 vs. NCBI nr
Match: XP_022942656.1 (probable rhamnogalacturonate lyase B isoform X1 [Cucurbita moschata])

HSP 1 Score: 1364 bits (3530), Expect = 0.0
Identity = 661/668 (98.95%), Postives = 663/668 (99.25%), Query Frame = 0


Query: 1   MAAVFFFFFPLHHSTNRIPTTPL-RRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQV 60
           MAAVFFFFFPLHHSTNRIPTTPL RRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQV
Sbjct: 13  MAAVFFFFFPLHHSTNRIPTTPLSRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQV 72

Query: 61  TLSTPDGDVVGLSYNGVDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGTAFKVIVST 120
           TLSTPDGDVVGLSYNG+DNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGT+FKVIVST
Sbjct: 73  TLSTPDGDVVGLSYNGIDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGTSFKVIVST 132

Query: 121 DEQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPEIEMDQVRI 180
           DEQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTG PEIEMDQVRI
Sbjct: 133 DEQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGCPEIEMDQVRI 192

Query: 181 VFRPQKKMFDYMAVSDSWQRVMPTMDDRNNGDPLQYPEAVLLTNPANGKLRGEVDDKYMY 240
           VFRPQKKMFDYMAVSDS QRVMPTMDDRNNGDPLQYPEAVLLTNPAN KLRGEVDDKYMY
Sbjct: 193 VFRPQKKMFDYMAVSDSRQRVMPTMDDRNNGDPLQYPEAVLLTNPANEKLRGEVDDKYMY 252

Query: 241 SIEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGT 300
           SIEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGT
Sbjct: 253 SIEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGT 312

Query: 301 DVGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDF 360
           DVGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDF
Sbjct: 313 DVGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDF 372

Query: 361 PSSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHG 420
           PSSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHG
Sbjct: 373 PSSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHG 432

Query: 421 SFLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGI 480
           SFLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGI
Sbjct: 433 SFLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGI 492

Query: 481 PDRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDW 540
           PDRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDW
Sbjct: 493 PDRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDW 552

Query: 541 FYAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQP 600
           FYAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQP
Sbjct: 553 FYAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQP 612

Query: 601 GFTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYV 660
            FTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYV
Sbjct: 613 AFTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYV 672

Query: 661 RLEAPPRT 667
           RLEAPPRT
Sbjct: 673 RLEAPPRT 680

[Close]

BLAST of Csor.00g024490 vs. NCBI nr
Match: XP_023526329.1 (probable rhamnogalacturonate lyase B isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1353 bits (3503), Expect = 0.0
Identity = 652/667 (97.75%), Postives = 656/667 (98.35%), Query Frame = 0


Query: 1   MAAVFFFFFPLHHSTNRIPTTPLRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQVT 60
           MAA FFF FPLHH+TNRIPTTPLRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQVT
Sbjct: 13  MAAAFFFLFPLHHTTNRIPTTPLRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQVT 72

Query: 61  LSTPDGDVVGLSYNGVDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGTAFKVIVSTD 120
           LSTPDGDVVGLSYNG+DNILDTKTEAPNRGYWDAVWNNPNE INTDRLLGT FKVIVSTD
Sbjct: 73  LSTPDGDVVGLSYNGIDNILDTKTEAPNRGYWDAVWNNPNEHINTDRLLGTTFKVIVSTD 132

Query: 121 EQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPEIEMDQVRIV 180
           EQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPEIEMDQVRIV
Sbjct: 133 EQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPEIEMDQVRIV 192

Query: 181 FRPQKKMFDYMAVSDSWQRVMPTMDDRNNGDPLQYPEAVLLTNPANGKLRGEVDDKYMYS 240
           FRPQKKMFDYMAVSDS QRVMPTMDDRNNGDPL YPEAVLLTNPAN KLRGEVDDKYMYS
Sbjct: 193 FRPQKKMFDYMAVSDSRQRVMPTMDDRNNGDPLAYPEAVLLTNPANEKLRGEVDDKYMYS 252

Query: 241 IEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTD 300
           IEDKDNL+HGWISRNPPTGFWMITPSDEFRVAGP KQDLTSHAGPITLSMF STHYAGTD
Sbjct: 253 IEDKDNLVHGWISRNPPTGFWMITPSDEFRVAGPFKQDLTSHAGPITLSMFVSTHYAGTD 312

Query: 301 VGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFP 360
           VGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFP
Sbjct: 313 VGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFP 372

Query: 361 SSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGS 420
           SSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGS
Sbjct: 373 SSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGS 432

Query: 421 FLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIP 480
           FLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIP
Sbjct: 433 FLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIP 492

Query: 481 DRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWF 540
           DRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVF+VGVDNYTQDWF
Sbjct: 493 DRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFSVGVDNYTQDWF 552

Query: 541 YAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQPG 600
           YAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQPG
Sbjct: 553 YAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQPG 612

Query: 601 FTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYVR 660
           FTTGRIGRDNAIARHGIHGLYWLYS PFPGTQFLKGNNSMYFTQARS GPFQGLMYDYVR
Sbjct: 613 FTTGRIGRDNAIARHGIHGLYWLYSAPFPGTQFLKGNNSMYFTQARSKGPFQGLMYDYVR 672

Query: 661 LEAPPRT 667
           LEAPPRT
Sbjct: 673 LEAPPRT 679

[Close]

BLAST of Csor.00g024490 vs. NCBI nr
Match: XP_023526323.1 (probable rhamnogalacturonate lyase B isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1349 bits (3491), Expect = 0.0
Identity = 652/668 (97.60%), Postives = 656/668 (98.20%), Query Frame = 0


Query: 1   MAAVFFFFFPLHHSTNRIPTTPL-RRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQV 60
           MAA FFF FPLHH+TNRIPTTPL RRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQV
Sbjct: 13  MAAAFFFLFPLHHTTNRIPTTPLSRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQV 72

Query: 61  TLSTPDGDVVGLSYNGVDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGTAFKVIVST 120
           TLSTPDGDVVGLSYNG+DNILDTKTEAPNRGYWDAVWNNPNE INTDRLLGT FKVIVST
Sbjct: 73  TLSTPDGDVVGLSYNGIDNILDTKTEAPNRGYWDAVWNNPNEHINTDRLLGTTFKVIVST 132

Query: 121 DEQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPEIEMDQVRI 180
           DEQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPEIEMDQVRI
Sbjct: 133 DEQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPEIEMDQVRI 192

Query: 181 VFRPQKKMFDYMAVSDSWQRVMPTMDDRNNGDPLQYPEAVLLTNPANGKLRGEVDDKYMY 240
           VFRPQKKMFDYMAVSDS QRVMPTMDDRNNGDPL YPEAVLLTNPAN KLRGEVDDKYMY
Sbjct: 193 VFRPQKKMFDYMAVSDSRQRVMPTMDDRNNGDPLAYPEAVLLTNPANEKLRGEVDDKYMY 252

Query: 241 SIEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGT 300
           SIEDKDNL+HGWISRNPPTGFWMITPSDEFRVAGP KQDLTSHAGPITLSMF STHYAGT
Sbjct: 253 SIEDKDNLVHGWISRNPPTGFWMITPSDEFRVAGPFKQDLTSHAGPITLSMFVSTHYAGT 312

Query: 301 DVGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDF 360
           DVGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDF
Sbjct: 313 DVGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDF 372

Query: 361 PSSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHG 420
           PSSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHG
Sbjct: 373 PSSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHG 432

Query: 421 SFLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGI 480
           SFLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGI
Sbjct: 433 SFLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGI 492

Query: 481 PDRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDW 540
           PDRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVF+VGVDNYTQDW
Sbjct: 493 PDRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFSVGVDNYTQDW 552

Query: 541 FYAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQP 600
           FYAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQP
Sbjct: 553 FYAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQP 612

Query: 601 GFTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYV 660
           GFTTGRIGRDNAIARHGIHGLYWLYS PFPGTQFLKGNNSMYFTQARS GPFQGLMYDYV
Sbjct: 613 GFTTGRIGRDNAIARHGIHGLYWLYSAPFPGTQFLKGNNSMYFTQARSKGPFQGLMYDYV 672

Query: 661 RLEAPPRT 667
           RLEAPPRT
Sbjct: 673 RLEAPPRT 680

[Close]

BLAST of Csor.00g024490 vs. ExPASy TrEMBL
Match: A0A6J1FQV9 (Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111447626 PE=3 SV=1)

HSP 1 Score: 1368 bits (3542), Expect = 0.0
Identity = 661/667 (99.10%), Postives = 663/667 (99.40%), Query Frame = 0


Query: 1   MAAVFFFFFPLHHSTNRIPTTPLRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQVT 60
           MAAVFFFFFPLHHSTNRIPTTPLRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQVT
Sbjct: 13  MAAVFFFFFPLHHSTNRIPTTPLRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQVT 72

Query: 61  LSTPDGDVVGLSYNGVDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGTAFKVIVSTD 120
           LSTPDGDVVGLSYNG+DNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGT+FKVIVSTD
Sbjct: 73  LSTPDGDVVGLSYNGIDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGTSFKVIVSTD 132

Query: 121 EQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPEIEMDQVRIV 180
           EQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTG PEIEMDQVRIV
Sbjct: 133 EQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGCPEIEMDQVRIV 192

Query: 181 FRPQKKMFDYMAVSDSWQRVMPTMDDRNNGDPLQYPEAVLLTNPANGKLRGEVDDKYMYS 240
           FRPQKKMFDYMAVSDS QRVMPTMDDRNNGDPLQYPEAVLLTNPAN KLRGEVDDKYMYS
Sbjct: 193 FRPQKKMFDYMAVSDSRQRVMPTMDDRNNGDPLQYPEAVLLTNPANEKLRGEVDDKYMYS 252

Query: 241 IEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTD 300
           IEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTD
Sbjct: 253 IEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTD 312

Query: 301 VGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFP 360
           VGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFP
Sbjct: 313 VGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFP 372

Query: 361 SSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGS 420
           SSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGS
Sbjct: 373 SSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGS 432

Query: 421 FLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIP 480
           FLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIP
Sbjct: 433 FLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIP 492

Query: 481 DRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWF 540
           DRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWF
Sbjct: 493 DRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWF 552

Query: 541 YAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQPG 600
           YAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQP 
Sbjct: 553 YAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQPA 612

Query: 601 FTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYVR 660
           FTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYVR
Sbjct: 613 FTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYVR 672

Query: 661 LEAPPRT 667
           LEAPPRT
Sbjct: 673 LEAPPRT 679

[Close]

BLAST of Csor.00g024490 vs. ExPASy TrEMBL
Match: A0A6J1FPG8 (Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111447626 PE=3 SV=1)

HSP 1 Score: 1364 bits (3530), Expect = 0.0
Identity = 661/668 (98.95%), Postives = 663/668 (99.25%), Query Frame = 0


Query: 1   MAAVFFFFFPLHHSTNRIPTTPL-RRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQV 60
           MAAVFFFFFPLHHSTNRIPTTPL RRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQV
Sbjct: 13  MAAVFFFFFPLHHSTNRIPTTPLSRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQV 72

Query: 61  TLSTPDGDVVGLSYNGVDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGTAFKVIVST 120
           TLSTPDGDVVGLSYNG+DNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGT+FKVIVST
Sbjct: 73  TLSTPDGDVVGLSYNGIDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGTSFKVIVST 132

Query: 121 DEQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPEIEMDQVRI 180
           DEQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTG PEIEMDQVRI
Sbjct: 133 DEQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGCPEIEMDQVRI 192

Query: 181 VFRPQKKMFDYMAVSDSWQRVMPTMDDRNNGDPLQYPEAVLLTNPANGKLRGEVDDKYMY 240
           VFRPQKKMFDYMAVSDS QRVMPTMDDRNNGDPLQYPEAVLLTNPAN KLRGEVDDKYMY
Sbjct: 193 VFRPQKKMFDYMAVSDSRQRVMPTMDDRNNGDPLQYPEAVLLTNPANEKLRGEVDDKYMY 252

Query: 241 SIEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGT 300
           SIEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGT
Sbjct: 253 SIEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGT 312

Query: 301 DVGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDF 360
           DVGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDF
Sbjct: 313 DVGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDF 372

Query: 361 PSSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHG 420
           PSSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHG
Sbjct: 373 PSSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHG 432

Query: 421 SFLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGI 480
           SFLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGI
Sbjct: 433 SFLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGI 492

Query: 481 PDRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDW 540
           PDRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDW
Sbjct: 493 PDRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDW 552

Query: 541 FYAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQP 600
           FYAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQP
Sbjct: 553 FYAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQP 612

Query: 601 GFTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYV 660
            FTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYV
Sbjct: 613 AFTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYV 672

Query: 661 RLEAPPRT 667
           RLEAPPRT
Sbjct: 673 RLEAPPRT 680

[Close]

BLAST of Csor.00g024490 vs. ExPASy TrEMBL
Match: A0A6J1JRT5 (Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111488340 PE=3 SV=1)

HSP 1 Score: 1338 bits (3462), Expect = 0.0
Identity = 644/666 (96.70%), Postives = 651/666 (97.75%), Query Frame = 0


Query: 2   AAVFFFFFPLHHSTNRIPTTPLRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQVTL 61
           AA FFFFFPLH STNRIPTTPL RNLM MNINNSSGQFKVRLQRSGGNVVMDNGIVQVTL
Sbjct: 15  AAFFFFFFPLHPSTNRIPTTPLSRNLMGMNINNSSGQFKVRLQRSGGNVVMDNGIVQVTL 74

Query: 62  STPDGDVVGLSYNGVDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGTAFKVIVSTDE 121
           STPDGDVVGLSYNG+DNILDTKTEAPNRGYWDAVWNNPNE INTDRLLGT FKVIVS DE
Sbjct: 75  STPDGDVVGLSYNGIDNILDTKTEAPNRGYWDAVWNNPNEHINTDRLLGTTFKVIVSNDE 134

Query: 122 QLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPEIEMDQVRIVF 181
           QLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYA+FERLTGWPEIEMDQVRIVF
Sbjct: 135 QLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAIFERLTGWPEIEMDQVRIVF 194

Query: 182 RPQKKMFDYMAVSDSWQRVMPTMDDRNNGDPLQYPEAVLLTNPANGKLRGEVDDKYMYSI 241
           RPQKKMFDYMAVSDS QRVMPTMDDR+NGDPL YPEAVLLTNPAN KLRGEVDDKYMYSI
Sbjct: 195 RPQKKMFDYMAVSDSRQRVMPTMDDRDNGDPLAYPEAVLLTNPANEKLRGEVDDKYMYSI 254

Query: 242 EDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTDV 301
           EDKDNL+HGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMF STHYAGTDV
Sbjct: 255 EDKDNLVHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFVSTHYAGTDV 314

Query: 302 GMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFPS 361
           GMKFA+GEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFPS
Sbjct: 315 GMKFAKGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFPS 374

Query: 362 SAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGSF 421
           SAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGSF
Sbjct: 375 SAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGSF 434

Query: 422 LINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIPD 481
           LINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSK KLDEMVFDPPRQGPTIWEIGIPD
Sbjct: 435 LINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKTKLDEMVFDPPRQGPTIWEIGIPD 494

Query: 482 RTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWFY 541
           RTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWFY
Sbjct: 495 RTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWFY 554

Query: 542 AHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQPGF 601
           AHVTRDVGNQTYEATTWE+RFSLQSVNQTANYTLQIALASAADCELQVRLNDK SS+PGF
Sbjct: 555 AHVTRDVGNQTYEATTWEIRFSLQSVNQTANYTLQIALASAADCELQVRLNDKKSSRPGF 614

Query: 602 TTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYVRL 661
           TTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQAR  GPFQGLMYDYVRL
Sbjct: 615 TTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARGQGPFQGLMYDYVRL 674

Query: 662 EAPPRT 667
           EAPPRT
Sbjct: 675 EAPPRT 680

[Close]

BLAST of Csor.00g024490 vs. ExPASy TrEMBL
Match: A0A6J1JMW1 (Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111488340 PE=3 SV=1)

HSP 1 Score: 1333 bits (3450), Expect = 0.0
Identity = 644/667 (96.55%), Postives = 651/667 (97.60%), Query Frame = 0


Query: 2   AAVFFFFFPLHHSTNRIPTTPLR-RNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQVT 61
           AA FFFFFPLH STNRIPTTPL  RNLM MNINNSSGQFKVRLQRSGGNVVMDNGIVQVT
Sbjct: 15  AAFFFFFFPLHPSTNRIPTTPLSSRNLMGMNINNSSGQFKVRLQRSGGNVVMDNGIVQVT 74

Query: 62  LSTPDGDVVGLSYNGVDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGTAFKVIVSTD 121
           LSTPDGDVVGLSYNG+DNILDTKTEAPNRGYWDAVWNNPNE INTDRLLGT FKVIVS D
Sbjct: 75  LSTPDGDVVGLSYNGIDNILDTKTEAPNRGYWDAVWNNPNEHINTDRLLGTTFKVIVSND 134

Query: 122 EQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPEIEMDQVRIV 181
           EQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYA+FERLTGWPEIEMDQVRIV
Sbjct: 135 EQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAIFERLTGWPEIEMDQVRIV 194

Query: 182 FRPQKKMFDYMAVSDSWQRVMPTMDDRNNGDPLQYPEAVLLTNPANGKLRGEVDDKYMYS 241
           FRPQKKMFDYMAVSDS QRVMPTMDDR+NGDPL YPEAVLLTNPAN KLRGEVDDKYMYS
Sbjct: 195 FRPQKKMFDYMAVSDSRQRVMPTMDDRDNGDPLAYPEAVLLTNPANEKLRGEVDDKYMYS 254

Query: 242 IEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTD 301
           IEDKDNL+HGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMF STHYAGTD
Sbjct: 255 IEDKDNLVHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFVSTHYAGTD 314

Query: 302 VGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFP 361
           VGMKFA+GEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFP
Sbjct: 315 VGMKFAKGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFP 374

Query: 362 SSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGS 421
           SSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGS
Sbjct: 375 SSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGS 434

Query: 422 FLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIP 481
           FLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSK KLDEMVFDPPRQGPTIWEIGIP
Sbjct: 435 FLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKTKLDEMVFDPPRQGPTIWEIGIP 494

Query: 482 DRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWF 541
           DRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWF
Sbjct: 495 DRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWF 554

Query: 542 YAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQPG 601
           YAHVTRDVGNQTYEATTWE+RFSLQSVNQTANYTLQIALASAADCELQVRLNDK SS+PG
Sbjct: 555 YAHVTRDVGNQTYEATTWEIRFSLQSVNQTANYTLQIALASAADCELQVRLNDKKSSRPG 614

Query: 602 FTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYVR 661
           FTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQAR  GPFQGLMYDYVR
Sbjct: 615 FTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARGQGPFQGLMYDYVR 674

Query: 662 LEAPPRT 667
           LEAPPRT
Sbjct: 675 LEAPPRT 681

[Close]

BLAST of Csor.00g024490 vs. ExPASy TrEMBL
Match: A0A5A7UWM6 (Rhamnogalacturonan endolyase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G002040 PE=3 SV=1)

HSP 1 Score: 1116 bits (2886), Expect = 0.0
Identity = 526/661 (79.58%), Postives = 585/661 (88.50%), Query Frame = 0


Query: 7   FFFPLHHSTNRIPTTPLRRNLMDMNINNSSGQFKVRLQRSGGNVVMDNGIVQVTLSTPDG 66
           FFF L H+  RI T+P+RR L D++INNSS  F V LQR GG V+MDNGIVQVTLSTPDG
Sbjct: 22  FFFCLGHNGYRIRTSPVRRYLRDIDINNSSRLFNVTLQRKGGYVIMDNGIVQVTLSTPDG 81

Query: 67  DVVGLSYNGVDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGTAFKVIVSTDEQLEIS 126
           DVVGLSYNG+ NIL+TK E  NRGYWDAVWNNP+EPI TDRL G +++VI+  +EQLEIS
Sbjct: 82  DVVGLSYNGIPNILETKNEEQNRGYWDAVWNNPDEPIATDRLKGESYEVIIGNEEQLEIS 141

Query: 127 FVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPEIEMDQVRIVFRPQKK 186
           F KTWS  VGN+  PVNVDKR+VLLRGSSGFY+Y +FER TGWP+IEMDQVRIVF+ Q +
Sbjct: 142 FNKTWSSGVGNETVPVNVDKRYVLLRGSSGFYSYGIFERPTGWPQIEMDQVRIVFKLQSQ 201

Query: 187 MFDYMAVSDSWQRVMPTMDDRNNGDPLQYPEAVLLTNPANGKLRGEVDDKYMYSIEDKDN 246
           MFDYMAVSD  QRVMPTM DR NG+PL +PEAVLLTNP+N +LRGEVDDKY YS EDKDN
Sbjct: 202 MFDYMAVSDDRQRVMPTMLDRENGEPLAFPEAVLLTNPSNEELRGEVDDKYQYSTEDKDN 261

Query: 247 LLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITLSMFASTHYAGTDVGMKFA 306
            +HGWI  +PP GFWMITP+DEFRVAGPVKQDLTSHAGPITLSMF STHYAG D+GM+FA
Sbjct: 262 QVHGWICSDPPVGFWMITPTDEFRVAGPVKQDLTSHAGPITLSMFVSTHYAGKDIGMRFA 321

Query: 307 EGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEISKWPYTFPQSEDFPSSAQRG 366
            GEPWKKVFGPVFVYLNS SP+ED  SLW+DAKQQLA EI+ WPYTFPQSEDFPSSAQRG
Sbjct: 322 AGEPWKKVFGPVFVYLNSVSPEEDSLSLWEDAKQQLAIEINDWPYTFPQSEDFPSSAQRG 381

Query: 367 SVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESKGYQFWTQADSHGSFLINNV 426
           SV G+LL+RDG IS RL+RASNAFVGLALPGPVGSWQ ESKGYQFWTQAD+HG+FLI N+
Sbjct: 382 SVTGQLLVRDGYISSRLMRASNAFVGLALPGPVGSWQTESKGYQFWTQADNHGNFLIKNI 441

Query: 427 REGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDPPRQGPTIWEIGIPDRTAAE 486
           R GVYNLYAFVPGFIGDYKY+ NITI+ GS+I LD MVFDPPRQGPT+WEIG PDRTAAE
Sbjct: 442 RVGVYNLYAFVPGFIGDYKYKANITIEFGSEINLDVMVFDPPRQGPTLWEIGFPDRTAAE 501

Query: 487 FYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLVFTVGVDNYTQDWFYAHVTR 546
           FYVPDP+PTLMNKLY +H DKFRQYGLWERYAA+YPNNDLVFTVGVD+YT DWFYAHV R
Sbjct: 502 FYVPDPYPTLMNKLYNNHADKFRQYGLWERYAAIYPNNDLVFTVGVDDYTVDWFYAHVNR 561

Query: 547 DVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCELQVRLNDKTSSQPGFTTGRI 606
           +VGNQTYEATTWE+RF LQSVNQTANYTLQIALASAA+CELQVRLN++ S Q  F+TGRI
Sbjct: 562 NVGNQTYEATTWEIRFFLQSVNQTANYTLQIALASAAECELQVRLNNRESEQSAFSTGRI 621

Query: 607 GRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARSHGPFQGLMYDYVRLEAPPR 666
           G+DNAIARHGIHGLYWLYS+PFPG QFL+GNNS+Y TQARS  PF+GLMYDY+RLEAPP 
Sbjct: 622 GKDNAIARHGIHGLYWLYSIPFPGDQFLQGNNSIYLTQARSESPFEGLMYDYIRLEAPPL 681

[Close]

BLAST of Csor.00g024490 vs. TAIR 10
Match: AT2G22620.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 823.5 bits (2126), Expect = 1.2e-238
Identity = 378/629 (60.10%), Postives = 477/629 (75.83%), Query Frame = 0


Query: 41  VRLQRSG-GNVVMDNGIVQVTLSTPDGDVVGLSYNGVDNILDTKTEAPNRGYWDAVWNNP 100
           V+L+R G   VV+DNGIVQVT S P+G + G+ Y+G+DN+LD K +  +RGYWD VW  P
Sbjct: 52  VQLRRVGHDTVVVDNGIVQVTFSNPEGLITGIKYHGIDNVLDDKID--DRGYWDVVWYEP 111

Query: 101 NEPINTDRLLGTAFKVIVSTDEQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYT 160
            +   TD+L GT F++I   +EQ+EISF +TW+++      P+NVDKR+++  G SG Y 
Sbjct: 112 EKKQKTDKLEGTKFEIITQNEEQIEISFTRTWTISRRGSLVPLNVDKRYIIRSGVSGLYM 171

Query: 161 YAVFERLTGWPEIEMDQVRIVFRPQKKMFDYMAVSDSWQRVMPTMDDRNNGDPLQYPEAV 220
           Y + ERL GWP+++MDQ+RIVF+   K FD+MA+SD  QR MP+M DR N   L Y EAV
Sbjct: 172 YGILERLEGWPDVDMDQIRIVFKLNPKKFDFMAISDDRQRSMPSMADRENSKSLAYKEAV 231

Query: 221 LLTNPANGKLRGEVDDKYMYSIEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDL 280
           LLTNP+N   +GEVDDKYMYS+EDKDN +HGWIS +PP GFWMITPSDEFR+ GP+KQDL
Sbjct: 232 LLTNPSNPMFKGEVDDKYMYSMEDKDNNVHGWISSDPPVGFWMITPSDEFRLGGPIKQDL 291

Query: 281 TSHAGPITLSMFASTHYAGTDVGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAK 340
           TSHAGPITLSMF STHYAG ++ M +  GEPWKKVFGPV  YLNS SPK+    LW+DAK
Sbjct: 292 TSHAGPITLSMFTSTHYAGKEMRMDYRNGEPWKKVFGPVLAYLNSVSPKDSTLRLWRDAK 351

Query: 341 QQLATEISKWPYTFPQSEDFPSSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPV 400
           +Q+A E+  WPY F  SED+P   QRG++ G+ LI+D  +S   +    AFVGLA  G  
Sbjct: 352 RQMAAEVKSWPYDFITSEDYPLRHQRGTLEGQFLIKDSYVSRLKIYGKFAFVGLAPIGEA 411

Query: 401 GSWQRESKGYQFWTQADSHGSFLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIK 460
           GSWQ ESKGYQFWT+AD  G F+I NVR G Y+LYA+  GFIGDYKYE NITI  GS++ 
Sbjct: 412 GSWQTESKGYQFWTKADRRGRFIIENVRAGNYSLYAWGSGFIGDYKYEQNITITPGSEMN 471

Query: 461 LDEMVFDPPRQGPTIWEIGIPDRTAAEFYVPDPFPTLMNKLYIDH-DDKFRQYGLWERYA 520
           +  +V++PPR GPT+WEIG+PDRTA EFY+PDP+PTLMNKLY++   D+FRQYGLW+RYA
Sbjct: 472 VGPLVYEPPRNGPTLWEIGVPDRTAGEFYIPDPYPTLMNKLYVNPLQDRFRQYGLWDRYA 531

Query: 521 AMYPNNDLVFTVGVDNYTQDWFYAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIA 580
            +YP NDLV+T+GV +Y  DWF+AHV R+VGN TY+ TTW++ F+L++VN+   YTL+IA
Sbjct: 532 DLYPQNDLVYTIGVSDYRSDWFFAHVARNVGNDTYQPTTWQIIFNLKNVNRIGRYTLRIA 591

Query: 581 LASAADCELQVRLNDKTSSQPGFTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNN 640
           LASAAD ELQ+R+ND   S   FTTG IG+DNAIARHGIHGLY LYS+   G     G+N
Sbjct: 592 LASAADSELQIRIND-PKSDAIFTTGFIGKDNAIARHGIHGLYRLYSIDVAGNLLSVGDN 651

Query: 641 SMYFTQARSHGPFQGLMYDYVRLEAPPRT 668
           +++ TQ RS  PFQG+MYDY+RLE+P RT
Sbjct: 652 TIFLTQTRSRTPFQGIMYDYIRLESPFRT 677

[Close]

BLAST of Csor.00g024490 vs. TAIR 10
Match: AT1G09910.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 754.6 bits (1947), Expect = 6.8e-218
Identity = 340/618 (55.02%), Postives = 455/618 (73.62%), Query Frame = 0


Query: 50  VVMDNGIVQVTLSTPDGDVVGLSYNGVDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLL 109
           VVMDNGI+QVTLS P G + G+ YNG+DN+L+ + +  NRGYWD  WN P      D + 
Sbjct: 58  VVMDNGILQVTLSKPGGIITGIEYNGIDNVLEVRNKETNRGYWDLHWNEPGGKGIFDVIS 117

Query: 110 GTAFKVIVSTDEQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGW 169
           G  F+VIV T+EQ+EISF++TW  ++  K  P+N+DKRF++LRGSSG Y+Y ++E L  W
Sbjct: 118 GVTFRVIVETEEQVEISFLRTWDPSLEGKYIPLNIDKRFIMLRGSSGVYSYGIYEHLKDW 177

Query: 170 PEIEMDQVRIVFRPQKKMFDYMAVSDSWQRVMPTMDDRNNG--DPLQYPEAVLLTNPANG 229
           P  E+ + RI F+ +K  F YMAV+D  +R+MP  DD   G    L Y EA LLT P + 
Sbjct: 178 PGFELGETRIAFKLRKDKFHYMAVADDRKRIMPFPDDLCKGRCQTLDYQEASLLTAPCDP 237

Query: 230 KLRGEVDDKYMYSIEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPIT 289
           +L+GEVDDKY YS E+KD  +HGWIS +PP GFW ITPS+EFR  GP+KQ+LTSH GP T
Sbjct: 238 RLQGEVDDKYQYSCENKDLRVHGWISFDPPVGFWQITPSNEFRSGGPLKQNLTSHVGPTT 297

Query: 290 LSMFASTHYAGTDVGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLATEIS 349
           L++F STHYAG  +  +F  GEPWKKV+GPVF+YLNS +  +D   LW DAK ++  E+ 
Sbjct: 298 LAVFHSTHYAGKTMMPRFEHGEPWKKVYGPVFIYLNSTANGDDPLCLWDDAKIKMMAEVE 357

Query: 350 KWPYTFPQSEDFPSSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESK 409
           +WPY+F  S+D+P S +RG+  GRLLIRD  I++ L+ A  A+VGLA PG  GSWQ E K
Sbjct: 358 RWPYSFVASDDYPKSEERGTARGRLLIRDRFINNDLISARGAYVGLAPPGDSGSWQIECK 417

Query: 410 GYQFWTQADSHGSFLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDP 469
           GYQFW  AD  G F I NVR G YNLYA+VP FIGDY     + + +G  I++ ++V++P
Sbjct: 418 GYQFWAIADEAGYFSIGNVRPGEYNLYAWVPSFIGDYHNGTIVRVTSGCMIEMGDIVYEP 477

Query: 470 PRQGPTIWEIGIPDRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLV 529
           PR GPT+WEIGIPDR A+EF++PDP PTL+N++ + H D+FRQYGLW++Y  MYPN+DLV
Sbjct: 478 PRDGPTLWEIGIPDRKASEFFIPDPDPTLVNRVLVHHQDRFRQYGLWKKYTDMYPNDDLV 537

Query: 530 FTVGVDNYTQDWFYAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCEL 589
           +TVGV +Y +DWF+AHV R  G+  +E TTW++ F+L++++Q ANY L++A+ASA   EL
Sbjct: 538 YTVGVSDYRRDWFFAHVPRKKGD-VHEGTTWQIIFNLENIDQKANYKLRVAIASATLAEL 597

Query: 590 QVRLNDKTSSQPGFTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARS 649
           Q+R+ND  + +P FTTG IGRDN+IARHGIHG+Y LY+V  PG + ++G+N+++  Q R 
Sbjct: 598 QIRINDAEAIRPLFTTGLIGRDNSIARHGIHGVYMLYAVNIPGNRLVQGDNTIFLKQPRC 657

Query: 650 HGPFQGLMYDYVRLEAPP 666
           +GPFQG+MYDY+RLE PP
Sbjct: 658 NGPFQGIMYDYIRLEGPP 674

[Close]

BLAST of Csor.00g024490 vs. TAIR 10
Match: AT4G24430.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 751.5 bits (1939), Expect = 5.7e-217
Identity = 357/639 (55.87%), Postives = 458/639 (71.67%), Query Frame = 0


Query: 36  SGQFKVRLQRSGGNVVMDNGIVQVTLSTPDGDVVGLSYNGVDNILDTKTEAPNRGYWDAV 95
           S Q  V+L     +VVM NG V+VT+S PDG V G+SY GVDN+L+T  E  NRGYWD V
Sbjct: 2   SNQDSVQLDVQESHVVMGNGKVKVTISKPDGFVTGISYQGVDNLLETHNEDFNRGYWDLV 61

Query: 96  WNNPNEPINT---DRLLGTAFKVIVSTDEQLEISFVKTWSVAVGNKNAPVNVDKRFVLLR 155
           W++   P  T   +R+ GT+F+V+V  +E +EISF + W  ++ +  AP+NVDKRF++ +
Sbjct: 62  WSDEGTPGTTGKSERIKGTSFEVVVENEELVEISFSRKWDSSLQDSIAPINVDKRFIMRK 121

Query: 156 GSSGFYTYAVFERLTGWPEIEMDQVRIVFRPQKKMFDYMAVSDSWQRVMPTMDDR--NNG 215
             +GFY+YA+FE L  WP   + Q RIV++ +K  F YMA++D+ QR MP  +DR    G
Sbjct: 122 DVTGFYSYAIFEHLAEWPAFNLPQTRIVYKLRKDKFKYMAIADNRQRKMPLPEDRLGKRG 181

Query: 216 DPLQYPEAVLLTNPANGKLRGEVDDKYMYSIEDKDNLLHGWISRNPPTGFWMITPSDEFR 275
            PL YPEAVLL +P   + +GEVDDKY YS E+KD  +HGWIS N   G W I PS+EFR
Sbjct: 182 RPLAYPEAVLLVHPVEDEFKGEVDDKYEYSSENKDLKVHGWISHNLDLGCWQIIPSNEFR 241

Query: 276 VAGPVKQDLTSHAGPITLSMFASTHYAGTDVGMKFAEGEPWKKVFGPVFVYLNSASPK-E 335
             G  KQ+LTSH GPI+L+MF S HYAG D+ MK   G+ WKKVFGPVF YLN    K  
Sbjct: 242 SGGLSKQNLTSHVGPISLAMFLSAHYAGEDMVMKVKAGDSWKKVFGPVFTYLNCLPDKTS 301

Query: 336 DYRSLWQDAKQQLATEISKWPYTFPQSEDFPSSAQRGSVAGRLLIRDGSISDRLLRASNA 395
           D  SLWQDAK Q+ TE+  WPY FP SEDFP S +RG ++GRLL+ D  +SD  L A+ A
Sbjct: 302 DPLSLWQDAKNQMLTEVQSWPYDFPASEDFPVSDKRGCISGRLLVCDKFLSDDFLPANGA 361

Query: 396 FVGLALPGPVGSWQRESKGYQFWTQADSHGSFLINNVREGVYNLYAFVPGFIGDYKYEGN 455
           FVGLA PG VGSWQ ESKGYQFWT+ADS G F IN++REG YNL  +V G+IGDY+YE  
Sbjct: 362 FVGLAPPGEVGSWQLESKGYQFWTEADSDGYFAINDIREGEYNLNGYVTGWIGDYQYEQL 421

Query: 456 ITIKAGSKIKLDEMVFDPPRQGPTIWEIGIPDRTAAEFYVPDPFPTLMNKLYIDHDDKFR 515
           I I AG  I +  +V++PPR GPT+WEIGIPDR+AAEF+VPDP P  +NKLYI H D+FR
Sbjct: 422 INITAGCDIDVGNIVYEPPRDGPTVWEIGIPDRSAAEFFVPDPNPKYINKLYIGHPDRFR 481

Query: 516 QYGLWERYAAMYPNNDLVFTVGVDNYTQDWFYAHVTRDVGNQTYEATTWEVRFSLQSVNQ 575
           QYGLWERY  +YP  DLVFT+GV +Y +DWF+AHVTR +G+ TY+ TTW+++F L++V +
Sbjct: 482 QYGLWERYTELYPKEDLVFTIGVSDYKKDWFFAHVTRKMGDDTYQKTTWQIKFKLENVQK 541

Query: 576 TANYTLQIALASAADCELQVRLNDKTSSQ--PGFTTGRIGRDNAIARHGIHGLYWLYSVP 635
           +  Y ++IALA+A   ELQVR+ND  + +  P FTTG IG DNAIARHGIHG+Y LY+V 
Sbjct: 542 SCTYKIRIALATANVAELQVRMNDDDTEKTTPIFTTGVIGHDNAIARHGIHGIYRLYNVD 601

Query: 636 FPGTQFLKGNNSMYFTQA-RSHGPFQGLMYDYVRLEAPP 666
            P  + ++G+N+++ TQ   + G F GLMYDY+RLE PP
Sbjct: 602 VPSEKLVEGDNTLFLTQTMTTTGAFNGLMYDYIRLEGPP 640

[Close]

BLAST of Csor.00g024490 vs. TAIR 10
Match: AT1G09890.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 749.6 bits (1934), Expect = 2.2e-216
Identity = 340/617 (55.11%), Postives = 445/617 (72.12%), Query Frame = 0


Query: 52  MDNGIVQVTLSTPDGDVVGLSYNGVDNILDTKTEAPNRGYWDAVWNNPNEPINTDRLLGT 111
           MDNGI +VTLS PDG V G+ YNG+DN+L+   E  NRGYWD VW         D + G+
Sbjct: 1   MDNGIARVTLSKPDGIVTGIEYNGIDNLLEVLNEEVNRGYWDLVWGGSGTAGGFDVIKGS 60

Query: 112 AFKVIVSTDEQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFERLTGWPE 171
            F+VIV  +EQ+E+SF + W  +   K  P+N+DKRFV+L GSSGFYTYA++E L  WP 
Sbjct: 61  NFEVIVKNEEQIELSFTRKWDPSQEGKAVPLNIDKRFVMLSGSSGFYTYAIYEHLKEWPA 120

Query: 172 IEMDQVRIVFRPQKKMFDYMAVSDSWQRVMPTMDDR--NNGDPLQYPEAVLLTNPANGKL 231
             + + RI F+ +K+ F YMAV+D  QR MP  DDR  + G  L YPEAVLL NP   + 
Sbjct: 121 FSLAETRIAFKLRKEKFHYMAVTDDRQRFMPLPDDRLPDRGQALAYPEAVLLVNPLESQF 180

Query: 232 RGEVDDKYMYSIEDKDNLLHGWI-SRNPPTGFWMITPSDEFRVAGPVKQDLTSHAGPITL 291
           +GEVDDKY YS E+KD  +HGWI +  P  GFW+ITPS E+R  GP KQ+LTSH GP  L
Sbjct: 181 KGEVDDKYQYSCENKDITVHGWICTEQPSVGFWLITPSHEYRTGGPQKQNLTSHVGPTAL 240

Query: 292 SMFASTHYAGTDVGMKFAEGEPWKKVFGPVFVYLNSASPKE-DYRSLWQDAKQQLATEIS 351
           ++F S HY G D+  KF+EGE WKKVFGPVFVYLNS++  + D   LWQDAK Q+  E  
Sbjct: 241 AVFISAHYTGEDLVPKFSEGEAWKKVFGPVFVYLNSSTDDDNDPLWLWQDAKSQMNVEAE 300

Query: 352 KWPYTFPQSEDFPSSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQRESK 411
            WPY+FP S+D+  + QRG+V GRLL++D  +    + A+  +VGLA+PG  GSWQRE K
Sbjct: 301 SWPYSFPASDDYVKTEQRGNVVGRLLVQDRYVDKDFIAANRGYVGLAVPGAAGSWQRECK 360

Query: 412 GYQFWTQADSHGSFLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEMVFDP 471
            YQFWT+ D  G F I+ +R G YNLYA++PGFIGDYKY+  ITI +G  I ++++V+ P
Sbjct: 361 EYQFWTRTDEEGFFYISGIRPGQYNLYAWIPGFIGDYKYDDVITITSGCYIYVEDLVYQP 420

Query: 472 PRQGPTIWEIGIPDRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPNNDLV 531
           PR G T+WEIG PDR+AAEFYVPDP P  +N LY +H D+FRQYGLWERYA +YP+ DLV
Sbjct: 421 PRNGATLWEIGFPDRSAAEFYVPDPNPKYINNLYQNHPDRFRQYGLWERYAELYPDKDLV 480

Query: 532 FTVGVDNYTQDWFYAHVTRDVGNQTYEATTWEVRFSLQSVNQTANYTLQIALASAADCEL 591
           + VG  +Y +DWFYA VTR   N+TY+ TTW+++F L+++++  +YTL++A+ASA   EL
Sbjct: 481 YVVGSSDYRKDWFYAQVTRKKDNKTYQGTTWQIKFELKNIDKNHSYTLRVAIASATFSEL 540

Query: 592 QVRLNDKTSSQPGFTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMYFTQARS 651
           Q+R+N+  +S P FT+G IGRDN+IARHGIHGLYWL++V   G++ L+G N+++ TQ RS
Sbjct: 541 QIRVNNANAS-PMFTSGLIGRDNSIARHGIHGLYWLFNVEVAGSKLLEGENTLFLTQPRS 600

Query: 652 HGPFQGLMYDYVRLEAP 665
             PFQG+MYDY+R EAP
Sbjct: 601 TSPFQGIMYDYIRFEAP 616

[Close]

BLAST of Csor.00g024490 vs. TAIR 10
Match: AT1G09880.1 (Rhamnogalacturonate lyase family protein )

HSP 1 Score: 746.5 bits (1926), Expect = 1.8e-215
Identity = 350/623 (56.18%), Postives = 442/623 (70.95%), Query Frame = 0


Query: 52  MDNGIVQVTLSTPDGDVVGLSYNGVDNILDTKTEAP-NRGYWDAVWNNPNEPI-----NT 111
           M+N  +Q+TLS P+G V G+ YNG+DN+L   T    +RGYWD VWN P +         
Sbjct: 1   MENRFLQLTLSNPEGFVTGIQYNGIDNVLAYYTNKEYDRGYWDVVWNFPGKKAKKTKGTL 60

Query: 112 DRLLGTAFKVIVSTDEQLEISFVKTWSVAVGNKNAPVNVDKRFVLLRGSSGFYTYAVFER 171
           DR+  T  +VI   DE++E+SF +TW+ +      PVN+DKRFV+L+ SSGFY+YA+FER
Sbjct: 61  DRIEATKMEVITQNDEKIELSFTRTWNTS-STTAVPVNIDKRFVMLQNSSGFYSYAIFER 120

Query: 172 LTGWPEIEMDQVRIVFRPQKKMFDYMAVSDSWQRVMPTMDDR--NNGDPLQYPEAVLLTN 231
           L GWP +E+D +R+VF+  KK F YMA+SD  QR MP  DDR    G PL YPEAV L +
Sbjct: 121 LQGWPAVELDNMRLVFKLNKKKFHYMAISDDRQRYMPVPDDRVPPRGQPLAYPEAVQLLD 180

Query: 232 PANGKLRGEVDDKYMYSIEDKDNLLHGWISRNPPTGFWMITPSDEFRVAGPVKQDLTSHA 291
           P   + +GEVDDKY YS+E KD  +HGWIS N   GFW ITPS+EFR AGP+KQ L SH 
Sbjct: 181 PIEPEFKGEVDDKYEYSMESKDIKVHGWISTNDSVGFWQITPSNEFRSAGPLKQFLGSHV 240

Query: 292 GPITLSMFASTHYAGTDVGMKFAEGEPWKKVFGPVFVYLNSASPKEDYRSLWQDAKQQLA 351
           GP  L++F STHY G D+ M F  GE WKKVFGPVF+YLNS     D   LW +AK Q  
Sbjct: 241 GPTNLAVFHSTHYVGADLIMSFKNGEAWKKVFGPVFIYLNSFPKGVDPLLLWHEAKNQTK 300

Query: 352 TEISKWPYTFPQSEDFPSSAQRGSVAGRLLIRDGSISDRLLRASNAFVGLALPGPVGSWQ 411
            E  KWPY F  S+DFP+S QRGSV+GRLL+RD  IS   + A+ ++VGLA PG VGSWQ
Sbjct: 301 IEEEKWPYNFTASDDFPASDQRGSVSGRLLVRDRFISSEDIPANGSYVGLAAPGDVGSWQ 360

Query: 412 RESKGYQFWTQADSHGSFLINNVREGVYNLYAFVPGFIGDYKYEGNITIKAGSKIKLDEM 471
           RE KGYQFW++AD +GSF INNVR G YNLYAF PGFIGDY  +    I  GSKI L ++
Sbjct: 361 RECKGYQFWSKADENGSFSINNVRSGRYNLYAFAPGFIGDYHNDTVFDISPGSKISLGDL 420

Query: 472 VFDPPRQGPTIWEIGIPDRTAAEFYVPDPFPTLMNKLYIDHDDKFRQYGLWERYAAMYPN 531
           V++PPR G T+WEIG+PDR+AAEFY+PDP P+ +NKLY++H DK+RQYGLWERY+ +YP+
Sbjct: 421 VYEPPRDGSTLWEIGVPDRSAAEFYIPDPNPSFVNKLYLNHSDKYRQYGLWERYSELYPD 480

Query: 532 NDLVFTVGVDNYTQDWFYAHVTRDVGNQTYEATTWEVRFSL--QSVNQTANYTLQIALAS 591
            D+V+ V +D+Y+++WF+  VTR   N  Y+ TTW++RF    +  N T N+ L+IALA+
Sbjct: 481 EDMVYNVDIDDYSKNWFFMQVTRKQANGGYKGTTWQIRFQFDDKMKNVTGNFKLRIALAT 540

Query: 592 AADCELQVRLNDKTSSQPGFTTGRIGRDNAIARHGIHGLYWLYSVPFPGTQFLKGNNSMY 651
           +   ELQVR+ND ++  P F T +IGRDN IARHGIHGLYWLYSV  P      GNN++Y
Sbjct: 541 SNVAELQVRVNDLSADPPLFRTEQIGRDNTIARHGIHGLYWLYSVNVPAASLHVGNNTIY 600

Query: 652 FTQARSHGPFQGLMYDYVRLEAP 665
            TQA +  PFQGLMYDY+RLE P
Sbjct: 601 LTQALATSPFQGLMYDYIRLEYP 622

The following BLAST results are available for this feature:

BLAST of Csor.00g024490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B0XPA2	1.0e-21	25.48	Probable rhamnogalacturonate lyase B OS=Neosartorya fumigata (strain CEA10 / CBS...	[more]
Q4WR79	1.0e-21	25.48	Probable rhamnogalacturonate lyase B OS=Neosartorya fumigata (strain ATCC MYA-46...	[more]
A1D144	3.4e-20	24.84	Probable rhamnogalacturonate lyase B OS=Neosartorya fischeri (strain ATCC 1020 /...	[more]
Q2U5P7	1.2e-14	22.50	Probable rhamnogalacturonate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / ...	[more]

BLAST of Csor.00g024490 vs. NCBI nr


Match Name	Identity	Description
KAG6600684.1	100.00	hypothetical protein SDJN03_05917, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022942657.1	99.10	probable rhamnogalacturonate lyase B isoform X2 [Cucurbita moschata]	[more]
XP_022942656.1	98.95	probable rhamnogalacturonate lyase B isoform X1 [Cucurbita moschata]	[more]
XP_023526329.1	97.75	probable rhamnogalacturonate lyase B isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023526323.1	97.60	probable rhamnogalacturonate lyase B isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g024490 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1FQV9	99.10	Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111447626 PE=3 ...	[more]
A0A6J1FPG8	98.95	Rhamnogalacturonan endolyase OS=Cucurbita moschata OX=3662 GN=LOC111447626 PE=3 ...	[more]
A0A6J1JRT5	96.70	Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111488340 PE=3 SV...	[more]
A0A6J1JMW1	96.55	Rhamnogalacturonan endolyase OS=Cucurbita maxima OX=3661 GN=LOC111488340 PE=3 SV...	[more]
A0A5A7UWM6	79.58	Rhamnogalacturonan endolyase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]

BLAST of Csor.00g024490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22620.1	1.2e-238	60.10	Rhamnogalacturonate lyase family protein	[more]
AT1G09910.1	6.8e-218	55.02	Rhamnogalacturonate lyase family protein	[more]
AT4G24430.1	5.7e-217	55.87	Rhamnogalacturonate lyase family protein	[more]
AT1G09890.1	2.2e-216	55.11	Rhamnogalacturonate lyase family protein	[more]
AT1G09880.1	1.8e-215	56.18	Rhamnogalacturonate lyase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029411	Rhamnogalacturonan lyase, domain III	PFAM	PF14683	CBM-like	coord: 473..661 e-value: 2.0E-52 score: 177.6
IPR014718	Glycoside hydrolase-type carbohydrate-binding	GENE3D	2.70.98.10		coord: 41..335 e-value: 2.9E-10 score: 42.0
IPR029413	Rhamnogalacturonan lyase, domain II	PFAM	PF14686	fn3_3	coord: 387..459 e-value: 9.9E-25 score: 86.2
IPR029413	Rhamnogalacturonan lyase, domain II	CDD	cd10316	RGL4_M	coord: 364..460 e-value: 7.20125E-34 score: 122.357
None	No IPR available	GENE3D	2.60.120.260		coord: 471..662 e-value: 3.7E-19 score: 70.9
None	No IPR available	GENE3D	2.60.40.1120		coord: 361..461 e-value: 1.6E-8 score: 36.7
None	No IPR available	PANTHER	PTHR32018:SF6	RHAMNOGALACTURONATE LYASE FAMILY PROTEIN	coord: 47..666
None	No IPR available	PANTHER	PTHR32018	RHAMNOGALACTURONATE LYASE FAMILY PROTEIN	coord: 47..666
None	No IPR available	CDD	cd10320	RGL4_N	coord: 41..328 e-value: 2.0105E-70 score: 228.042
None	No IPR available	CDD	cd10317	RGL4_C	coord: 475..662 e-value: 1.00957E-51 score: 174.386
IPR010325	Rhamnogalacturonate lyase	PFAM	PF06045	Rhamnogal_lyase	coord: 33..233 e-value: 1.0E-76 score: 257.1
IPR011013	Galactose mutarotase-like domain superfamily	SUPERFAMILY	74650	Galactose mutarotase-like	coord: 45..326
IPR008979	Galactose-binding-like domain superfamily	SUPERFAMILY	49785	Galactose-binding domain-like	coord: 471..662
IPR013784	Carbohydrate-binding-like fold	SUPERFAMILY	49452	Starch-binding domain-like	coord: 363..461

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g024490.m01	Csor.00g024490.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0042742	defense response to bacterium
biological_process	GO:0043069	negative regulation of programmed cell death
biological_process	GO:0009723	response to ethylene
biological_process	GO:0009751	response to salicylic acid
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0102210	rhamnogalacturonan endolyase activity
molecular_function	GO:0003824	catalytic activity