Csor.00g024450 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGATTCGGATCAAAGCCTGAGCCATTCGAATCCCTTCCAGTCTTCTTCCTTCTTCGCTTCGCCCTCCTGTTTTGGCACTAACAATCCAAAAACAACCCACTACTCTCGCCTCAACGCCTCTTCCGCAAAAACCAGAATCAGATGGCGGCATCTTCTCAAAAGGTGGCTCAAGGGTCGCACCAGAGGTTACGCCTACAAGTCTTTCACCTTCCAGTACGACGCCCTTAGCTATTCCTATAACTTCGACGACGGCTCTCACAGAGTTCAGACATGA ATGGCGGATTCGGATCAAAGCCTGAGCCATTCGAATCCCTTCCAGTCTTCTTCCTTCTTCGCTTCGCCCTCCTGTTTTGGCACTAACAATCCAAAAACAACCCACTACTCTCGCCTCAACGCCTCTTCCGCAAAAACCAGAATCAGATGGCGGCATCTTCTCAAAAGGTGGCTCAAGGGTCGCACCAGAGGTTACGCCTACAAGTCTTTCACCTTCCAGTACGACGCCCTTAGCTATTCCTATAACTTCGACGACGGCTCTCACAGAGTTCAGACATGA ATGGCGGATTCGGATCAAAGCCTGAGCCATTCGAATCCCTTCCAGTCTTCTTCCTTCTTCGCTTCGCCCTCCTGTTTTGGCACTAACAATCCAAAAACAACCCACTACTCTCGCCTCAACGCCTCTTCCGCAAAAACCAGAATCAGATGGCGGCATCTTCTCAAAAGGTGGCTCAAGGGTCGCACCAGAGGTTACGCCTACAAGTCTTTCACCTTCCAGTACGACGCCCTTAGCTATTCCTATAACTTCGACGACGGCTCTCACAGAGTTCAGACATGA MADSDQSLSHSNPFQSSSFFASPSCFGTNNPKTTHYSRLNASSAKTRIRWRHLLKRWLKGRTRGYAYKSFTFQYDALSYSYNFDDGSHRVQT Homology
BLAST of Csor.00g024450 vs. NCBI nr
Match: KAG6600680.1 (hypothetical protein SDJN03_05913, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 187 bits (475), Expect = 8.71e-60 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of Csor.00g024450 vs. NCBI nr
Match: EOX91869.1 (Uncharacterized protein TCM_000929 [Theobroma cacao]) HSP 1 Score: 65.9 bits (159), Expect = 2.41e-11 Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = 0
BLAST of Csor.00g024450 vs. NCBI nr
Match: KAG6594915.1 (hypothetical protein SDJN03_11468, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 62.0 bits (149), Expect = 5.19e-10 Identity = 36/83 (43.37%), Postives = 47/83 (56.63%), Query Frame = 0
BLAST of Csor.00g024450 vs. NCBI nr
Match: PPS19339.1 (hypothetical protein GOBAR_AA01233 [Gossypium barbadense]) HSP 1 Score: 59.3 bits (142), Expect = 5.88e-09 Identity = 39/97 (40.21%), Postives = 58/97 (59.79%), Query Frame = 0
BLAST of Csor.00g024450 vs. NCBI nr
Match: KAG6645754.1 (hypothetical protein CIPAW_08G144700 [Carya illinoinensis] >KAG6701045.1 hypothetical protein I3842_08G144400 [Carya illinoinensis]) HSP 1 Score: 59.3 bits (142), Expect = 6.75e-09 Identity = 36/70 (51.43%), Postives = 46/70 (65.71%), Query Frame = 0
BLAST of Csor.00g024450 vs. ExPASy TrEMBL
Match: A0A061DHC4 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_000929 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.17e-11 Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = 0
BLAST of Csor.00g024450 vs. ExPASy TrEMBL
Match: A0A2P5YUV8 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA01233 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.85e-09 Identity = 39/97 (40.21%), Postives = 58/97 (59.79%), Query Frame = 0
BLAST of Csor.00g024450 vs. ExPASy TrEMBL
Match: A0A5D2MV38 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A12G105100v1 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.12e-09 Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 0
BLAST of Csor.00g024450 vs. ExPASy TrEMBL
Match: A0A5J5T7U1 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A12G088200v1 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.12e-09 Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 0
BLAST of Csor.00g024450 vs. ExPASy TrEMBL
Match: A0A5D2E8G1 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A12G095700v1 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.12e-09 Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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