Csor.00g024380 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g024380
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Location	Csor_Chr04: 4398505 .. 4399408 (+)
RNA-Seq Expression	Csor.00g024380
Synteny	Csor.00g024380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTTGGGTTTAGAATCGGCGGTGTTCCAAGAAGATAAGTTGATTGGTTGTGGATGGAAGAATGTGGAAGCAATGGAAGCAGGCGAAGTTGGTGGCGGAGGATTGAGGGCCACCGTTGCTCCAGTGGGGAAGCGATGGGGGCGGAGGGGGAAGATGGTGAAGAAGAGGGAGGAGATTGAGAAGCAAAGAATGGTACACATAGCTGTTGAACGCAATAGGAGAAAGCAAATGAATGAGTATCTGTGTGTGCTGAGATCCATGATGCCTTCTTCCTACACCCAAAGGGTAATCCCATCATATCCCATCATGCCTTCTTCTTCCATTGCATCATAATGATAAGAAAAGGTTTTAATTTGCAGGGAGATCAGGCGTCAATCGTGGGAGGGACCATCAAGTTCGTGAAGGAGTTAGAACAGCTTGTGCAGTGGTTAGAGGGAAAGAAGCAAAGGCATGAACATATTTGTTATTCCGGCCAGGATTATTCAGGGGAATCGAAGGTGGAGGTGAGGGTGATAGAGAGGTACGCCAACATAAAAATGAGGGCGGAGAATCGGCCGAAACAGCTTCTAAAAGTGGCGCTGGAATTGCACTCTCTTCAACTTTTGATTCTTCACGTCAACGTCACTACCATTCGCCAAATGGTTTTTTATTGTTTCAGCGTCAAGGTAAAGAGATAGAGTATTAAGTTTTTAAATATGAGATGGGAATCTTACTTTGGCCTCAATCATTACTTTTTTTTTTTTTTTTTTTTTTATAATTTAAAATAATTTTGGTAATAGTTGATTGAATTATTTGAATATGGCAGATTGAAGATGAATGTGAACTGAACACTGTGGGTGAGATTACTGCAGCTGTCGATCACTTGTGGAAAAGGGTGACTAGTTTCAATGCCAATATATAA

mRNA sequence

ATGGTGTTGGGTTTAGAATCGGCGGTGTTCCAAGAAGATAAGTTGATTGGTTGTGGATGGAAGAATGTGGAAGCAATGGAAGCAGGCGAAGTTGGTGGCGGAGGATTGAGGGCCACCGTTGCTCCAGTGGGGAAGCGATGGGGGCGGAGGGGGAAGATGGTGAAGAAGAGGGAGGAGATTGAGAAGCAAAGAATGGTACACATAGCTGTTGAACGCAATAGGAGAAAGCAAATGAATGAGTATCTGTGTGTGCTGAGATCCATGATGCCTTCTTCCTACACCCAAAGGGGAGATCAGGCGTCAATCGTGGGAGGGACCATCAAGTTCGTGAAGGAGTTAGAACAGCTTGTGCAGTGGTTAGAGGGAAAGAAGCAAAGGCATGAACATATTTGTTATTCCGGCCAGGATTATTCAGGGGAATCGAAGGTGGAGGTGAGGGTGATAGAGAGGTACGCCAACATAAAAATGAGGGCGGAGAATCGGCCGAAACAGCTTCTAAAAGTGGCGCTGGAATTGCACTCTCTTCAACTTTTGATTCTTCACGTCAACGTCACTACCATTCGCCAAATGGTTTTTTATTGTTTCAGCGTCAAGATTGAAGATGAATGTGAACTGAACACTGTGGGTGAGATTACTGCAGCTGTCGATCACTTGTGGAAAAGGGTGACTAGTTTCAATGCCAATATATAA

Coding sequence (CDS)

ATGGTGTTGGGTTTAGAATCGGCGGTGTTCCAAGAAGATAAGTTGATTGGTTGTGGATGGAAGAATGTGGAAGCAATGGAAGCAGGCGAAGTTGGTGGCGGAGGATTGAGGGCCACCGTTGCTCCAGTGGGGAAGCGATGGGGGCGGAGGGGGAAGATGGTGAAGAAGAGGGAGGAGATTGAGAAGCAAAGAATGGTACACATAGCTGTTGAACGCAATAGGAGAAAGCAAATGAATGAGTATCTGTGTGTGCTGAGATCCATGATGCCTTCTTCCTACACCCAAAGGGGAGATCAGGCGTCAATCGTGGGAGGGACCATCAAGTTCGTGAAGGAGTTAGAACAGCTTGTGCAGTGGTTAGAGGGAAAGAAGCAAAGGCATGAACATATTTGTTATTCCGGCCAGGATTATTCAGGGGAATCGAAGGTGGAGGTGAGGGTGATAGAGAGGTACGCCAACATAAAAATGAGGGCGGAGAATCGGCCGAAACAGCTTCTAAAAGTGGCGCTGGAATTGCACTCTCTTCAACTTTTGATTCTTCACGTCAACGTCACTACCATTCGCCAAATGGTTTTTTATTGTTTCAGCGTCAAGATTGAAGATGAATGTGAACTGAACACTGTGGGTGAGATTACTGCAGCTGTCGATCACTTGTGGAAAAGGGTGACTAGTTTCAATGCCAATATATAA

Protein sequence

MVLGLESAVFQEDKLIGCGWKNVEAMEAGEVGGGGLRATVAPVGKRWGRRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWLEGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAVDHLWKRVTSFNANI

Homology

[Close]

BLAST of Csor.00g024380 vs. ExPASy Swiss-Prot
Match: Q9SK91 (Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 3.2e-39
Identity = 95/209 (45.45%), Postives = 129/209 (61.72%), Query Frame = 0


Query: 42  PVGKRWGRRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQAS 101
           P  +R  RR +  K +EEIE QRM HIAVERNRRKQMNEYL VLRS+MPSSY QRGDQAS
Sbjct: 92  PQHRRKRRRTRNCKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQAS 151

Query: 102 IVGGTIKFVKELEQLVQWLEGKKQR------------------------HEHICYSGQDY 161
           IVGG I +VKELE ++Q +E K+ R                         ++   S  D 
Sbjct: 152 IVGGAINYVKELEHILQSMEPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDV 211

Query: 162 ----SGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFY 221
               S  +++EV V E +ANIK+  + +P+QLLK+   L SL+L +LH+NVTT+   + Y
Sbjct: 212 PESSSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILY 271

Query: 222 CFSVKIEDECELNTVGEITAAVDHLWKRV 223
             SV++E+  +LNTV +I  A++   +R+
Sbjct: 272 SISVRVEEGSQLNTVDDIATALNQTIRRI 300

[Close]

BLAST of Csor.00g024380 vs. ExPASy Swiss-Prot
Match: Q9C7T4 (Transcription factor bHLH96 OS=Arabidopsis thaliana OX=3702 GN=BHLH96 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.7e-37
Identity = 94/210 (44.76%), Postives = 128/210 (60.95%), Query Frame = 0


Query: 44  GKRWGRRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIV 103
           G+R  RR +  K +EEIE QRM HIAVERNRRKQMNEYL VLRS+MP  Y QRGDQASIV
Sbjct: 104 GRRKRRRTRSSKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIV 163

Query: 104 GGTIKFVKELEQLVQWLEGKKQRHEHICYSGQD---------------------YS---- 163
           GG I ++KELE  +Q +E   +       +G D                     YS    
Sbjct: 164 GGAINYLKELEHHLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPT 223

Query: 164 ------GESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVF 223
                 G +++EV ++E +A++K+ A+ RP+QLLK+   + SL+L +LH+NVTT    V 
Sbjct: 224 SAAAAEGMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVL 283

[Close]

BLAST of Csor.00g024380 vs. ExPASy Swiss-Prot
Match: Q700E4 (Transcription factor bHLH67 OS=Arabidopsis thaliana OX=3702 GN=BHLH67 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 4.5e-33
Identity = 84/196 (42.86%), Postives = 122/196 (62.24%), Query Frame = 0


Query: 45  KRWGRRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 104
           KR  R+ K  K  EEIE QR+ HIAVERNRR+QMNE++  LR+++P SY QRGDQASIVG
Sbjct: 158 KRKRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVG 217

Query: 105 GTIKFVKELEQLVQWLEGKKQRHEH--------------------ICYSGQDYSGESKVE 164
           G I +VK LEQ++Q LE +K+  +                     +  + +D +   K+E
Sbjct: 218 GAINYVKVLEQIIQSLESQKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPKIE 277

Query: 165 VRVIERYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTT-IRQMVFYCFSVKIEDEC 220
             VI+ + ++K++ E +  QLLK  + L  L+L +LH+N+TT     V Y F++K+EDEC
Sbjct: 278 ATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMEDEC 337

[Close]

BLAST of Csor.00g024380 vs. ExPASy Swiss-Prot
Match: O81037 (Transcription factor bHLH70 OS=Arabidopsis thaliana OX=3702 GN=BHLH70 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.0e-32
Identity = 86/197 (43.65%), Postives = 118/197 (59.90%), Query Frame = 0


Query: 45  KRWGRRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 104
           KR  RR K  K  EEIE QRM HIAVERNRR+QMN +L  LRS++PSSY QRGDQASIVG
Sbjct: 173 KRKRRRTKPTKNIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVG 232

Query: 105 GTIKFVKELEQLVQWLEGKKQRHEH---------------------ICYSGQDYSGESKV 164
           G I FVK LEQ +Q LE +K+  +                         + ++ S + K+
Sbjct: 233 GAIDFVKILEQQLQSLEAQKRSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKI 292

Query: 165 EVRVIERYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTT-IRQMVFYCFSVKIEDE 220
           E  VIE + N+K++   +  QLL+  + L  L+  +LH+N+T+     V Y F++K+EDE
Sbjct: 293 EATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDE 352

[Close]

BLAST of Csor.00g024380 vs. ExPASy Swiss-Prot
Match: Q9M128 (Transcription factor bHLH57 OS=Arabidopsis thaliana OX=3702 GN=BHLH57 PE=1 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.2e-31
Identity = 80/209 (38.28%), Postives = 122/209 (58.37%), Query Frame = 0


Query: 45  KRWGRRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 104
           KR  +R +  K ++E+E QRM HIAVERNRR+QMNE+L  LRS+MP S+ QRGDQASIVG
Sbjct: 95  KRKRKRTRAPKNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVG 154

Query: 105 GTIKFVKELEQLVQWLEGKKQR-------HEHICYSGQDYS------------------- 164
           G I F+KELEQL+Q LE +K++           C S    +                   
Sbjct: 155 GAIDFIKELEQLLQSLEAEKRKDGTDETPKTASCSSSSSLACTNSSISSVSTTSENGFTA 214

Query: 165 -----GESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFY 223
                  ++VE  VI+ + ++K+R +   +Q+LK  + +  L+L ILH+ +++    V Y
Sbjct: 215 RFGGGDTTEVEATVIQNHVSLKVRCKRGKRQILKAIVSIEELKLAILHLTISSSFDFVIY 274

[Close]

BLAST of Csor.00g024380 vs. NCBI nr
Match: KAG6600673.1 (Transcription factor basic helix-loop-helix 94, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 445 bits (1144), Expect = 2.46e-157
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MVLGLESAVFQEDKLIGCGWKNVEAMEAGEVGGGGLRATVAPVGKRWGRRGKMVKKREEI 60
           MVLGLESAVFQEDKLIGCGWKNVEAMEAGEVGGGGLRATVAPVGKRWGRRGKMVKKREEI
Sbjct: 1   MVLGLESAVFQEDKLIGCGWKNVEAMEAGEVGGGGLRATVAPVGKRWGRRGKMVKKREEI 60

Query: 61  EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL 120
           EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL
Sbjct: 61  EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL 120

Query: 121 EGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLIL 180
           EGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLIL
Sbjct: 121 EGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLIL 180

Query: 181 HVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAVDHLWKRVTSFNANI 229
           HVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAVDHLWKRVTSFNANI
Sbjct: 181 HVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAVDHLWKRVTSFNANI 229

[Close]

BLAST of Csor.00g024380 vs. NCBI nr
Match: XP_022943242.1 (transcription factor bHLH94-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 418 bits (1075), Expect = 7.83e-147
Identity = 215/222 (96.85%), Postives = 221/222 (99.55%), Query Frame = 0


Query: 1   MVLGLESAVFQEDKLIGCGWKNVEAMEAGEVGGGGLRATVAPVGKRWGRRGKMVKKREEI 60
           MVLGLESAVFQEDKLIGCGWKNVEAMEAG+VGGGGLRATVAPVGKRWGRRGKMVKKREEI
Sbjct: 1   MVLGLESAVFQEDKLIGCGWKNVEAMEAGKVGGGGLRATVAPVGKRWGRRGKMVKKREEI 60

Query: 61  EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL 120
           EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL
Sbjct: 61  EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL 120

Query: 121 EGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLIL 180
           EGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLIL
Sbjct: 121 EGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLIL 180

Query: 181 HVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAVDHLWKRV 222
           HVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAV+ +++R+
Sbjct: 181 HVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAVNQMFQRI 222

[Close]

BLAST of Csor.00g024380 vs. NCBI nr
Match: KAG7031312.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 427 bits (1099), Expect = 5.46e-140
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MVLGLESAVFQEDKLIGCGWKNVEAMEAGEVGGGGLRATVAPVGKRWGRRGKMVKKREEI 60
           MVLGLESAVFQEDKLIGCGWKNVEAMEAG VGGGGLRATVAPVGKRWGRRGKMVKKREEI
Sbjct: 1   MVLGLESAVFQEDKLIGCGWKNVEAMEAGAVGGGGLRATVAPVGKRWGRRGKMVKKREEI 60

Query: 61  EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL 120
           EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL
Sbjct: 61  EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL 120

Query: 121 EGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLIL 180
           EGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLIL
Sbjct: 121 EGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLIL 180

Query: 181 HVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAVDHLWKR 221
           HVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAVDHLWKR
Sbjct: 181 HVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAVDHLWKR 221

[Close]

BLAST of Csor.00g024380 vs. NCBI nr
Match: XP_023547050.1 (transcription factor bHLH94-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395 bits (1015), Expect = 1.09e-137
Identity = 204/222 (91.89%), Postives = 213/222 (95.95%), Query Frame = 0


Query: 1   MVLGLESAVFQEDKLIGCGWKNVEAMEAGEVGGGGLRATVAPVGKRWGRRGKMVKKREEI 60
           MVLGLESAVFQEDKLIGCGWKNVEAMEAGE  GGGLRATVAPVGKRWGRRGKMVKKREEI
Sbjct: 1   MVLGLESAVFQEDKLIGCGWKNVEAMEAGEFVGGGLRATVAPVGKRWGRRGKMVKKREEI 60

Query: 61  EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL 120
           EKQRM HIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIK V+ELEQLVQWL
Sbjct: 61  EKQRMTHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKLVRELEQLVQWL 120

Query: 121 EGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLIL 180
           EGKKQRHEHICY+GQDYSGESKVEVRVIE YANIKMRAENRP QLLKVALELHSL+LLIL
Sbjct: 121 EGKKQRHEHICYAGQDYSGESKVEVRVIESYANIKMRAENRPNQLLKVALELHSLKLLIL 180

Query: 181 HVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAVDHLWKRV 222
           HVNVTTI QMVFYCFSVKIED CEL+TVGEITAAV+ +++R+
Sbjct: 181 HVNVTTIGQMVFYCFSVKIEDGCELSTVGEITAAVNQMFQRI 222

[Close]

BLAST of Csor.00g024380 vs. NCBI nr
Match: XP_023001108.1 (transcription factor bHLH94-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 372 bits (955), Expect = 2.01e-128
Identity = 202/231 (87.45%), Postives = 207/231 (89.61%), Query Frame = 0


Query: 1   MVLGLESAVFQEDKLIGCGWKNVEAMEAGEVGGGGLRA---------TVAPVGKRWGRRG 60
           MVLGLESAVFQEDKLIGCGWKNVEAMEAGEV GGG                VGKRW  RG
Sbjct: 1   MVLGLESAVFQEDKLIGCGWKNVEAMEAGEVVGGGSSGFGMNKGSWLVEGGVGKRWRGRG 60

Query: 61  KMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVK 120
           KMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVK
Sbjct: 61  KMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVK 120

Query: 121 ELEQLVQWLEGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALE 180
           ELEQLVQWLEGKKQRHE ICYSGQD SGESKVEVRVIE YANIKMRAENRPKQLLKVALE
Sbjct: 121 ELEQLVQWLEGKKQRHERICYSGQD-SGESKVEVRVIESYANIKMRAENRPKQLLKVALE 180

Query: 181 LHSLQLLILHVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAVDHLWKRV 222
           LHSLQLLILHVNVTTIRQMVFYCFSVKI DECELNTVGEITAAV+ +++R+
Sbjct: 181 LHSLQLLILHVNVTTIRQMVFYCFSVKIGDECELNTVGEITAAVNQMFQRI 230

[Close]

BLAST of Csor.00g024380 vs. ExPASy TrEMBL
Match: A0A6J1FSH7 (transcription factor bHLH94-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448031 PE=4 SV=1)

HSP 1 Score: 418 bits (1075), Expect = 3.79e-147
Identity = 215/222 (96.85%), Postives = 221/222 (99.55%), Query Frame = 0


Query: 1   MVLGLESAVFQEDKLIGCGWKNVEAMEAGEVGGGGLRATVAPVGKRWGRRGKMVKKREEI 60
           MVLGLESAVFQEDKLIGCGWKNVEAMEAG+VGGGGLRATVAPVGKRWGRRGKMVKKREEI
Sbjct: 1   MVLGLESAVFQEDKLIGCGWKNVEAMEAGKVGGGGLRATVAPVGKRWGRRGKMVKKREEI 60

Query: 61  EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL 120
           EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL
Sbjct: 61  EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL 120

Query: 121 EGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLIL 180
           EGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLIL
Sbjct: 121 EGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLIL 180

Query: 181 HVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAVDHLWKRV 222
           HVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAV+ +++R+
Sbjct: 181 HVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAVNQMFQRI 222

[Close]

BLAST of Csor.00g024380 vs. ExPASy TrEMBL
Match: A0A6J1KPK0 (transcription factor bHLH94-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495321 PE=4 SV=1)

HSP 1 Score: 372 bits (955), Expect = 9.73e-129
Identity = 202/231 (87.45%), Postives = 207/231 (89.61%), Query Frame = 0


Query: 1   MVLGLESAVFQEDKLIGCGWKNVEAMEAGEVGGGGLRA---------TVAPVGKRWGRRG 60
           MVLGLESAVFQEDKLIGCGWKNVEAMEAGEV GGG                VGKRW  RG
Sbjct: 1   MVLGLESAVFQEDKLIGCGWKNVEAMEAGEVVGGGSSGFGMNKGSWLVEGGVGKRWRGRG 60

Query: 61  KMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVK 120
           KMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVK
Sbjct: 61  KMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVK 120

Query: 121 ELEQLVQWLEGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALE 180
           ELEQLVQWLEGKKQRHE ICYSGQD SGESKVEVRVIE YANIKMRAENRPKQLLKVALE
Sbjct: 121 ELEQLVQWLEGKKQRHERICYSGQD-SGESKVEVRVIESYANIKMRAENRPKQLLKVALE 180

Query: 181 LHSLQLLILHVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAVDHLWKRV 222
           LHSLQLLILHVNVTTIRQMVFYCFSVKI DECELNTVGEITAAV+ +++R+
Sbjct: 181 LHSLQLLILHVNVTTIRQMVFYCFSVKIGDECELNTVGEITAAVNQMFQRI 230

[Close]

BLAST of Csor.00g024380 vs. ExPASy TrEMBL
Match: A0A6J1FWL3 (transcription factor bHLH94-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448031 PE=4 SV=1)

HSP 1 Score: 351 bits (900), Expect = 6.74e-121
Identity = 189/222 (85.14%), Postives = 194/222 (87.39%), Query Frame = 0


Query: 1   MVLGLESAVFQEDKLIGCGWKNVEAMEAGEVGGGGLRATVAPVGKRWGRRGKMVKKREEI 60
           MVLGLESAVFQEDKLIG                           KRWGRRGKMVKKREEI
Sbjct: 1   MVLGLESAVFQEDKLIG---------------------------KRWGRRGKMVKKREEI 60

Query: 61  EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL 120
           EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL
Sbjct: 61  EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL 120

Query: 121 EGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLIL 180
           EGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLIL
Sbjct: 121 EGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLIL 180

Query: 181 HVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAVDHLWKRV 222
           HVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAV+ +++R+
Sbjct: 181 HVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAVNQMFQRI 195

[Close]

BLAST of Csor.00g024380 vs. ExPASy TrEMBL
Match: A0A6J1KFT5 (transcription factor bHLH94-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495321 PE=4 SV=1)

HSP 1 Score: 330 bits (845), Expect = 1.55e-112
Identity = 183/222 (82.43%), Postives = 188/222 (84.68%), Query Frame = 0


Query: 1   MVLGLESAVFQEDKLIGCGWKNVEAMEAGEVGGGGLRATVAPVGKRWGRRGKMVKKREEI 60
           MVLGLESAVFQEDKLIG                           KRW  RGKMVKKREEI
Sbjct: 1   MVLGLESAVFQEDKLIG---------------------------KRWRGRGKMVKKREEI 60

Query: 61  EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL 120
           EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL
Sbjct: 61  EKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWL 120

Query: 121 EGKKQRHEHICYSGQDYSGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLIL 180
           EGKKQRHE ICYSGQD SGESKVEVRVIE YANIKMRAENRPKQLLKVALELHSLQLLIL
Sbjct: 121 EGKKQRHERICYSGQD-SGESKVEVRVIESYANIKMRAENRPKQLLKVALELHSLQLLIL 180

Query: 181 HVNVTTIRQMVFYCFSVKIEDECELNTVGEITAAVDHLWKRV 222
           HVNVTTIRQMVFYCFSVKI DECELNTVGEITAAV+ +++R+
Sbjct: 181 HVNVTTIRQMVFYCFSVKIGDECELNTVGEITAAVNQMFQRI 194

[Close]

BLAST of Csor.00g024380 vs. ExPASy TrEMBL
Match: A0A6J1C7H5 (transcription factor bHLH94-like OS=Momordica charantia OX=3673 GN=LOC111008122 PE=4 SV=1)

HSP 1 Score: 248 bits (634), Expect = 2.96e-79
Identity = 157/276 (56.88%), Postives = 184/276 (66.67%), Query Frame = 0


Query: 1   MVLGLESAVFQEDKLIGCGWKNVEAMEAGEV---------------GGGGL--------- 60
           MVLGLES  FQ+D LI CGWK+++ M +GE+               GGGG          
Sbjct: 1   MVLGLESVAFQQD-LIACGWKDLQPMGSGEILRSFVYGGFGENDCGGGGGAEILNTPNWG 60

Query: 61  ------------------RAT----VAPVGKRWGRRGKMVKKREEIEKQRMVHIAVERNR 120
                             R+T     A  G+R  RRGKMVK  EEIE QRM HIAVERNR
Sbjct: 61  HSSPNSASFPEYNCALNKRSTEGDPAAKRGRRKRRRGKMVKNSEEIENQRMTHIAVERNR 120

Query: 121 RKQMNEYLCVLRSMMPSSYTQRGDQASIVGGTIKFVKELEQLVQWLEGKKQRHEHICYSG 180
           RKQMNEYL +LR+MMPSSYTQRGDQASIVGGTI FVKELEQLVQ LE +KQ H    +SG
Sbjct: 121 RKQMNEYLSMLRTMMPSSYTQRGDQASIVGGTINFVKELEQLVQCLEAEKQTHNF--FSG 180

Query: 181 QDY---SGESK-----VEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTT 222
           +D    + E++     VEV VIE YANIKM AE RP+QLLKV +ELHSL LL+LH+NVTT
Sbjct: 181 RDSVNSAAENRAMTVDVEVTVIESYANIKMIAEKRPRQLLKVVVELHSLHLLVLHINVTT 240

[Close]

BLAST of Csor.00g024380 vs. TAIR 10
Match: AT1G22490.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 163.3 bits (412), Expect = 2.3e-40
Identity = 95/209 (45.45%), Postives = 129/209 (61.72%), Query Frame = 0


Query: 42  PVGKRWGRRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQAS 101
           P  +R  RR +  K +EEIE QRM HIAVERNRRKQMNEYL VLRS+MPSSY QRGDQAS
Sbjct: 92  PQHRRKRRRTRNCKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQAS 151

Query: 102 IVGGTIKFVKELEQLVQWLEGKKQR------------------------HEHICYSGQDY 161
           IVGG I +VKELE ++Q +E K+ R                         ++   S  D 
Sbjct: 152 IVGGAINYVKELEHILQSMEPKRTRTHDPKGDKTSTSSLVGPFTDFFSFPQYSTKSSSDV 211

Query: 162 ----SGESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVFY 221
               S  +++EV V E +ANIK+  + +P+QLLK+   L SL+L +LH+NVTT+   + Y
Sbjct: 212 PESSSSPAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILY 271

Query: 222 CFSVKIEDECELNTVGEITAAVDHLWKRV 223
             SV++E+  +LNTV +I  A++   +R+
Sbjct: 272 SISVRVEEGSQLNTVDDIATALNQTIRRI 300

[Close]

BLAST of Csor.00g024380 vs. TAIR 10
Match: AT1G72210.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 155.6 bits (392), Expect = 4.8e-38
Identity = 94/210 (44.76%), Postives = 128/210 (60.95%), Query Frame = 0


Query: 44  GKRWGRRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIV 103
           G+R  RR +  K +EEIE QRM HIAVERNRRKQMNEYL VLRS+MP  Y QRGDQASIV
Sbjct: 104 GRRKRRRTRSSKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIV 163

Query: 104 GGTIKFVKELEQLVQWLEGKKQRHEHICYSGQD---------------------YS---- 163
           GG I ++KELE  +Q +E   +       +G D                     YS    
Sbjct: 164 GGAINYLKELEHHLQSMEPPVKTATEDTGAGHDQTKTTSASSSGPFSDFFAFPQYSNRPT 223

Query: 164 ------GESKVEVRVIERYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTTIRQMVF 223
                 G +++EV ++E +A++K+ A+ RP+QLLK+   + SL+L +LH+NVTT    V 
Sbjct: 224 SAAAAEGMAEIEVTMVESHASLKILAKKRPRQLLKLVSSIQSLRLTLLHLNVTTRDDSVL 283

[Close]

BLAST of Csor.00g024380 vs. TAIR 10
Match: AT3G61950.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 142.9 bits (359), Expect = 3.2e-34
Identity = 84/196 (42.86%), Postives = 122/196 (62.24%), Query Frame = 0


Query: 45  KRWGRRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 104
           KR  R+ K  K  EEIE QR+ HIAVERNRR+QMNE++  LR+++P SY QRGDQASIVG
Sbjct: 158 KRKRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVG 217

Query: 105 GTIKFVKELEQLVQWLEGKKQRHEH--------------------ICYSGQDYSGESKVE 164
           G I +VK LEQ++Q LE +K+  +                     +  + +D +   K+E
Sbjct: 218 GAINYVKVLEQIIQSLESQKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPKIE 277

Query: 165 VRVIERYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTT-IRQMVFYCFSVKIEDEC 220
             VI+ + ++K++ E +  QLLK  + L  L+L +LH+N+TT     V Y F++K+EDEC
Sbjct: 278 ATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMEDEC 337

[Close]

BLAST of Csor.00g024380 vs. TAIR 10
Match: AT3G61950.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 142.9 bits (359), Expect = 3.2e-34
Identity = 84/196 (42.86%), Postives = 122/196 (62.24%), Query Frame = 0


Query: 45  KRWGRRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 104
           KR  R+ K  K  EEIE QR+ HIAVERNRR+QMNE++  LR+++P SY QRGDQASIVG
Sbjct: 107 KRKRRKTKPSKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVG 166

Query: 105 GTIKFVKELEQLVQWLEGKKQRHEH--------------------ICYSGQDYSGESKVE 164
           G I +VK LEQ++Q LE +K+  +                     +  + +D +   K+E
Sbjct: 167 GAINYVKVLEQIIQSLESQKRTQQQSNSEVVENALNHLSGISSNDLWTTLEDQTCIPKIE 226

Query: 165 VRVIERYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTT-IRQMVFYCFSVKIEDEC 220
             VI+ + ++K++ E +  QLLK  + L  L+L +LH+N+TT     V Y F++K+EDEC
Sbjct: 227 ATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLKMEDEC 286

[Close]

BLAST of Csor.00g024380 vs. TAIR 10
Match: AT2G46810.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 139.4 bits (350), Expect = 3.5e-33
Identity = 86/197 (43.65%), Postives = 118/197 (59.90%), Query Frame = 0


Query: 45  KRWGRRGKMVKKREEIEKQRMVHIAVERNRRKQMNEYLCVLRSMMPSSYTQRGDQASIVG 104
           KR  RR K  K  EEIE QRM HIAVERNRR+QMN +L  LRS++PSSY QRGDQASIVG
Sbjct: 173 KRKRRRTKPTKNIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVG 232

Query: 105 GTIKFVKELEQLVQWLEGKKQRHEH---------------------ICYSGQDYSGESKV 164
           G I FVK LEQ +Q LE +K+  +                         + ++ S + K+
Sbjct: 233 GAIDFVKILEQQLQSLEAQKRSQQSDDNKEQIPEDNSLRNISSNKLRASNKEEQSSKLKI 292

Query: 165 EVRVIERYANIKMRAENRPKQLLKVALELHSLQLLILHVNVTT-IRQMVFYCFSVKIEDE 220
           E  VIE + N+K++   +  QLL+  + L  L+  +LH+N+T+     V Y F++K+EDE
Sbjct: 293 EATVIESHVNLKIQCTRKQGQLLRSIILLEKLRFTVLHLNITSPTNTSVSYSFNLKMEDE 352

The following BLAST results are available for this feature:

BLAST of Csor.00g024380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK91	3.2e-39	45.45	Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2	[more]
Q9C7T4	6.7e-37	44.76	Transcription factor bHLH96 OS=Arabidopsis thaliana OX=3702 GN=BHLH96 PE=1 SV=1	[more]
Q700E4	4.5e-33	42.86	Transcription factor bHLH67 OS=Arabidopsis thaliana OX=3702 GN=BHLH67 PE=2 SV=1	[more]
O81037	5.0e-32	43.65	Transcription factor bHLH70 OS=Arabidopsis thaliana OX=3702 GN=BHLH70 PE=2 SV=1	[more]
Q9M128	3.2e-31	38.28	Transcription factor bHLH57 OS=Arabidopsis thaliana OX=3702 GN=BHLH57 PE=1 SV=1	[more]

BLAST of Csor.00g024380 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600673.1	2.46e-157	100.00	Transcription factor basic helix-loop-helix 94, partial [Cucurbita argyrosperma ...	[more]
XP_022943242.1	7.83e-147	96.85	transcription factor bHLH94-like isoform X1 [Cucurbita moschata]	[more]
KAG7031312.1	5.46e-140	99.55	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_023547050.1	1.09e-137	91.89	transcription factor bHLH94-like [Cucurbita pepo subsp. pepo]	[more]
XP_023001108.1	2.01e-128	87.45	transcription factor bHLH94-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Csor.00g024380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FSH7	3.79e-147	96.85	transcription factor bHLH94-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1KPK0	9.73e-129	87.45	transcription factor bHLH94-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1FWL3	6.74e-121	85.14	transcription factor bHLH94-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1KFT5	1.55e-112	82.43	transcription factor bHLH94-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1C7H5	2.96e-79	56.88	transcription factor bHLH94-like OS=Momordica charantia OX=3673 GN=LOC111008122 ...	[more]

BLAST of Csor.00g024380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22490.1	2.3e-40	45.45	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G72210.1	4.8e-38	44.76	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G61950.1	3.2e-34	42.86	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G61950.2	3.2e-34	42.86	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G46810.1	3.5e-33	43.65	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 68..119 e-value: 8.1E-8 score: 42.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 63..114 e-value: 1.5E-9 score: 37.7
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 62..113 score: 14.182755
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 56..127 e-value: 4.1E-12 score: 47.6
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 62..128
None	No IPR available	PANTHER	PTHR11969:SF26	HELIX-LOOP-HELIX-LIKE PROTEIN	coord: 141..222
None	No IPR available	PANTHER	PTHR11969:SF26	HELIX-LOOP-HELIX-LIKE PROTEIN	coord: 48..129
None	No IPR available	PANTHER	PTHR11969	MAX DIMERIZATION, MAD	coord: 48..129
None	No IPR available	PANTHER	PTHR11969	MAX DIMERIZATION, MAD	coord: 141..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g024380.m01	Csor.00g024380.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity