Csor.00g023890 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codonsinglepolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCATCCATCGGAGCTTCCTACGCCAAGATTCACCTTCTACAAAAGCAACAGAAGGAGAAGCTCGAGAGGATGGAAGCGGATCGAATATCCCGGGGCGAGGCCGTCACTGCCGCCAGCTCCGGTGGCGGTTCTTTGCTTGCAAGGAAGAACAAAGTTCACCCGGGAAGCATTGCTCCGGCAGCTGCTGCCGACAGCTACAAAAACAGGACATGA ATGTCATCCATCGGAGCTTCCTACGCCAAGATTCACCTTCTACAAAAGCAACAGAAGGAGAAGCTCGAGAGGATGGAAGCGGATCGAATATCCCGGGGCGAGGCCGTCACTGCCGCCAGCTCCGGTGGCGGTTCTTTGCTTGCAAGGAAGAACAAAGTTCACCCGGGAAGCATTGCTCCGGCAGCTGCTGCCGACAGCTACAAAAACAGGACATGA ATGTCATCCATCGGAGCTTCCTACGCCAAGATTCACCTTCTACAAAAGCAACAGAAGGAGAAGCTCGAGAGGATGGAAGCGGATCGAATATCCCGGGGCGAGGCCGTCACTGCCGCCAGCTCCGGTGGCGGTTCTTTGCTTGCAAGGAAGAACAAAGTTCACCCGGGAAGCATTGCTCCGGCAGCTGCTGCCGACAGCTACAAAAACAGGACATGA MSSIGASYAKIHLLQKQQKEKLERMEADRISRGEAVTAASSGGGSLLARKNKVHPGSIAPAAAADSYKNRT Homology
BLAST of Csor.00g023890 vs. NCBI nr
Match: KAG6600624.1 (hypothetical protein SDJN03_05857, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 132 bits (332), Expect = 1.30e-38 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of Csor.00g023890 vs. NCBI nr
Match: KAE8649159.1 (hypothetical protein Csa_014463, partial [Cucumis sativus]) HSP 1 Score: 104 bits (259), Expect = 2.43e-27 Identity = 57/72 (79.17%), Postives = 59/72 (81.94%), Query Frame = 0
BLAST of Csor.00g023890 vs. NCBI nr
Match: KAG6577271.1 (hypothetical protein SDJN03_24845, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 100 bits (249), Expect = 5.84e-26 Identity = 59/72 (81.94%), Postives = 61/72 (84.72%), Query Frame = 0
BLAST of Csor.00g023890 vs. NCBI nr
Match: PON65265.1 (hypothetical protein PanWU01x14_117820 [Parasponia andersonii]) HSP 1 Score: 58.5 bits (140), Expect = 2.36e-09 Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of Csor.00g023890 vs. NCBI nr
Match: EOX92223.1 (Uncharacterized protein TCM_001203 [Theobroma cacao]) HSP 1 Score: 57.4 bits (137), Expect = 7.99e-09 Identity = 27/58 (46.55%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of Csor.00g023890 vs. ExPASy TrEMBL
Match: A0A2N9EUS9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6201 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 3.43e-10 Identity = 30/56 (53.57%), Postives = 42/56 (75.00%), Query Frame = 0
BLAST of Csor.00g023890 vs. ExPASy TrEMBL
Match: A0A2P5CW36 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_117820 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.14e-09 Identity = 32/64 (50.00%), Postives = 43/64 (67.19%), Query Frame = 0
BLAST of Csor.00g023890 vs. ExPASy TrEMBL
Match: A0A061DQL6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_001203 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 3.87e-09 Identity = 27/58 (46.55%), Postives = 41/58 (70.69%), Query Frame = 0
BLAST of Csor.00g023890 vs. ExPASy TrEMBL
Match: I1MYV6 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G020300 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.79e-08 Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of Csor.00g023890 vs. ExPASy TrEMBL
Match: A0A445FMY7 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_047262 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.79e-08 Identity = 31/57 (54.39%), Postives = 41/57 (71.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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