Csor.00g023780 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g023780
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
Location	Csor_Chr04: 4043079 .. 4045640 (+)
RNA-Seq Expression	Csor.00g023780
Synteny	Csor.00g023780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAGTGATGGTAAAAAAACTCCACCTTTCTTGAATCTTACACACAACCTTTCCACTCATGTTTGATGGTTGGAGTACTAAATACTCATGCTTTTGGATTTGGAAGATTAATCGTAACTCTTATAGTTGATGCTTCTTTCTACATTTTTTTCCTCTAGGAGTCTTTTAATTGAATGAGTTCTCGATTGTTGTTTTGTACGATCTTTTCATTAGGTTAATGGGTTTTGATGCACTCTGTATTCCCATCTCATCTGGTTCATAGGCTCCTCTAAGTATCAGATCCATTTTAAATTATTCTTAGATAGGTTATTACTGTGATATTTGCATTCCAGGTAGCTGCCAGGAAGTGATAGCATTAAATATGGAGGACAGTACACTACATCGGTTCGGAGCTGCATCAACAATTTTGGCTACTGGGGTACTGAATGCCATGATGATTATTATCAGATTCATGTGAACTGATAAATTATGTAAATATAAAGCTCTCTCTATATGCATTTTACAGGGTTATGGCAGAGCATATTTCTCTCCAACCTCTGCTCATACATGCACTGGAGATGGAAATGCAATGGTTGCACGTGCCGGGCTTCCACTTGAGGTTCATTTTTCTTTTCTAGTTATTGATAATTTCCTTCGCCTTTTTTTTTTTTTTTTTTGTTTTTTGCTACTTTTCTTTCCTTTGCTTGCGCAGGACTTGGAGTTTGTGCAGTTTCATCCAACGGGAATATATGGTGCTGGGTGCCTTATTACTAAGGGTCTGCACCATAATTTTGTATATATTCTTTTATTGGTTTGTTTTCTTCTCACTCTTCGTGGACTTAACTCTAACTTAAATGCAATTCTTTTGTTCTGTATAAATTAGGATCTCGTGGTGAAGGTGGCATTCTTAGGAACAGTAAAGGTGAGTGCTTTATGGAACGATATGCTCCAACAGCGAAGGATCTTGCATCAAGGGACGTTGTCTCAAGATCCATGACTATGGAAATTCGAGAGGGTCGTGGCATAGGTATGAAGCTTTTATCTCATCTAGAATCAAATAAATGCATCCATGTACATGTGCTATCTCTCAGCTGATAAGGCACGGTCAAATTGATGCAGGACATCAGGAACAAAATAAAACTATTCTGGAGAAATATATATTGATTTTTACTTTTTCCTTATTTAATATCTTTCTTTGGTTACTTAATTGATAGCTCTTAACAGGACCATTAAGGACCACATCTATCTTCACTTAAATCACTTGCCCCCAGATGTACTGAAGGAGAGACTCCCGAGTATCTCGGAAACTGCTGCCATATTTGCTGGTGTTGATGTTACCGAAAAGCCCATTCCTGTCTTACCTACAGTGCATTACAATATGGGTGGAATTCCCACGAATTATCGTGGACAGGTATGCATGAAAATGCAATCCAATTATATTTCATTTTTTTCAATTTTCTTCCTCAATGAAAGTATGGTTTTTCATCAAAAATGAAAATGTATAAATTTTTTGTGTCTGTAGAATTCGGAATGTCTCATCTTTTCTCTTCTTGCTATCTTCATGTGTAAATTTTTTGTTTGTCAGGTAGTTACAATCAAGGGCAATGATCCAGATGCTAATAGGCTTGGTGCAAATTTTTTGTGCACCAGTTCATGGTGCTAATAGGCTTGGTGCAAATTCGTTTTTGGACATTGTTGTCTTTGGACGGGCTTGTGCAAATAGGATAGCAGAGATCAGTAGTCCAGGCAAGATGCTTAATTTTTAACTCGAAAAAGGAAGGATGAACCCACAACCCAATCCAACCAATAATTATAAGAAAGAAAAATTCAGTTACGTCAAAAAATTCTATCTGGGCAATTTGCAGGCGCAAGGCAAAATCCGTTGGAAAAAGATGCTGGTAAGAAGACAATTGCATGGCTAGACAAACTAAGGAACTCAAATGGTTCACTGCCCACCTCGAAGATTCGGTTAAACATGCAACGAATTATGCAAAACAATGCTGCTGTTTTCCGAACACAGGAGACCTTGGAAGAAGGTATTAGCCAAACTGAAAAGAGACTTGGATTAGAACTTCTAATCTATCTGCAACTCTGCCTCAATTTTTTTTTTCCACCTCTTTTATTGTCTTCTGCTTCTTTAGAGTGCAAATTAATTGACAAGGCATGGGAGAGTATCCATGATGTGAAGGTCAAGGACAGGACTTTAATATGGTAATAGGATCATGGTGTTTCTCTATCTTTTCTTTGTCTGTTTGTTTTAAATGTTATTATAATTATAAAGTTTTATGTACTGAATTCTTTCAAGGATTGATTTAAGATCTTTATTCGTAGTACATGAACTCTGATTCCATAGATACAATTGAATTGGAAAATCTTTTGATAAATGCCTGCATTACCATGCACTCTGCGGAAGCCAGGAAAGAGAGCAGAGGAGCACATGCTCGTGAAGATTTCACAGTTAGTTTTTTTTTCTTCTATTGATAGTAACACTTTCCTCCAACTTTATTTCTGTAACTTTGTTATACTCTGCTTATGCAGAAAAGGGATGATGAGAACTGGATGAAGCACACGTTGGAGTAA

mRNA sequence

ATGAATAGTGATGGTAGCTGCCAGGAAGTGATAGCATTAAATATGGAGGACAGTACACTACATCGGTTCGGAGCTGCATCAACAATTTTGGCTACTGGGGGTTATGGCAGAGCATATTTCTCTCCAACCTCTGCTCATACATGCACTGGAGATGGAAATGCAATGGTTGCACGTGCCGGGCTTCCACTTGAGGACTTGGAGTTTGTGCAGTTTCATCCAACGGGAATATATGGTGCTGGGTGCCTTATTACTAAGGGATCTCGTGGTGAAGGATCTTGCATCAAGGGACGTTGTCTCAAGATCCATGACTATGGAAATTCGAGAGGGTCGTGGCATAGGACCATTAAGGACCACATCTATCTTCACTTAAATCACTTGCCCCCAGATGTACTGAAGGAGAGACTCCCGAGTATCTCGGAAACTGCTGCCATATTTGCTGGTGTTGATGTTACCGAAAAGCCCATTCCTGTCTTACCTACAGTGCATTACAATATGGGTGGAATTCCCACGAATTATCGTGGACAGGTAGTTACAATCAAGGGCAATGATCCAGATGCTAATAGGCTTGGTGCAAATTTTTTGTGCACCAGTTCATGGATAGCAGAGATCAGTAGTCCAGGCGCAAGGCAAAATCCGTTGGAAAAAGATGCTGGTAAGAAGACAATTGCATGGCTAGACAAACTAAGGAACTCAAATGGTTCACTGCCCACCTCGAAGATTCGGTTAAACATGCAACGAATTATGCAAAACAATGCTGCTGTTTTCCGAACACAGGAGACCTTGGAAGAAGAGTGCAAATTAATTGACAAGGCATGGGAGAGTATCCATGATGTGAAGTACATGAACTCTGATTCCATAGATACAATTGAATTGGAAAATCTTTTGATAAATGCCTGCATTACCATGCACTCTGCGGAAGCCAGGAAAGAGAGCAGAGGAGCACATGCTCGTGAAGATTTCACAAAAAGGGATGATGAGAACTGGATGAAGCACACGTTGGAGTAA

Coding sequence (CDS)

ATGAATAGTGATGGTAGCTGCCAGGAAGTGATAGCATTAAATATGGAGGACAGTACACTACATCGGTTCGGAGCTGCATCAACAATTTTGGCTACTGGGGGTTATGGCAGAGCATATTTCTCTCCAACCTCTGCTCATACATGCACTGGAGATGGAAATGCAATGGTTGCACGTGCCGGGCTTCCACTTGAGGACTTGGAGTTTGTGCAGTTTCATCCAACGGGAATATATGGTGCTGGGTGCCTTATTACTAAGGGATCTCGTGGTGAAGGATCTTGCATCAAGGGACGTTGTCTCAAGATCCATGACTATGGAAATTCGAGAGGGTCGTGGCATAGGACCATTAAGGACCACATCTATCTTCACTTAAATCACTTGCCCCCAGATGTACTGAAGGAGAGACTCCCGAGTATCTCGGAAACTGCTGCCATATTTGCTGGTGTTGATGTTACCGAAAAGCCCATTCCTGTCTTACCTACAGTGCATTACAATATGGGTGGAATTCCCACGAATTATCGTGGACAGGTAGTTACAATCAAGGGCAATGATCCAGATGCTAATAGGCTTGGTGCAAATTTTTTGTGCACCAGTTCATGGATAGCAGAGATCAGTAGTCCAGGCGCAAGGCAAAATCCGTTGGAAAAAGATGCTGGTAAGAAGACAATTGCATGGCTAGACAAACTAAGGAACTCAAATGGTTCACTGCCCACCTCGAAGATTCGGTTAAACATGCAACGAATTATGCAAAACAATGCTGCTGTTTTCCGAACACAGGAGACCTTGGAAGAAGAGTGCAAATTAATTGACAAGGCATGGGAGAGTATCCATGATGTGAAGTACATGAACTCTGATTCCATAGATACAATTGAATTGGAAAATCTTTTGATAAATGCCTGCATTACCATGCACTCTGCGGAAGCCAGGAAAGAGAGCAGAGGAGCACATGCTCGTGAAGATTTCACAAAAAGGGATGATGAGAACTGGATGAAGCACACGTTGGAGTAA

Protein sequence

MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIKGRCLKIHDYGNSRGSWHRTIKDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLPTVHYNMGGIPTNYRGQVVTIKGNDPDANRLGANFLCTSSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNAAVFRTQETLEEECKLIDKAWESIHDVKYMNSDSIDTIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLE

Homology

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BLAST of Csor.00g023780 vs. ExPASy Swiss-Prot
Match: Q6ZDY8 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH1 PE=1 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 1.2e-140
Identity = 265/387 (68.48%), Postives = 294/387 (75.97%), Query Frame = 0


Query: 1   MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 60
           M+S+G+CQ VIALNMED TLHRF A +TILATGGYGRAYFS TSAHTCTGDGNAMVARAG
Sbjct: 210 MDSEGTCQGVIALNMEDGTLHRFRATNTILATGGYGRAYFSATSAHTCTGDGNAMVARAG 269

Query: 61  LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIK--------------GRCLKIHDYGN 120
           LPL+DLEFVQFHPTGIYGAGCLIT+GSRGEG  ++               + L   D  +
Sbjct: 270 LPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVS 329

Query: 121 -------SRGSWHRTIKDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLP 180
                    G     +KDHIYLHLNHLPP+VLKERLP ISETAAIFAGVDVT++PIPVLP
Sbjct: 330 RSMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLP 389

Query: 181 TVHYNMGGIPTNYRGQVVTIKGNDPD-------------------ANRLGANFL------ 240
           TVHYNMGGIPTNY G+VVT+KG++PD                   ANRLGAN L      
Sbjct: 390 TVHYNMGGIPTNYHGEVVTMKGDNPDSVVPGLMAAGEAACASVHGANRLGANSLLDIVVF 449

Query: 241 --CTSSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNA 300
               ++ +AE + PG +Q PL+K AG+KTIAWLDKLRN+NGSLPTSKIRLNMQR+MQNNA
Sbjct: 450 GRACANRVAETAKPGEKQKPLQKSAGEKTIAWLDKLRNANGSLPTSKIRLNMQRVMQNNA 509

Query: 301 AVFRTQETLEEECKLIDKAWESIHDVK------YMNSDSIDTIELENLLINACITMHSAE 334
           AVFRTQETLEE CKLI KAWES HDVK        NSD I+TIELENLLINACITMHSAE
Sbjct: 510 AVFRTQETLEEGCKLITKAWESYHDVKISDRSLIWNSDLIETIELENLLINACITMHSAE 569

[Close]

BLAST of Csor.00g023780 vs. ExPASy Swiss-Prot
Match: O82663 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH1-1 PE=1 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 3.1e-139
Identity = 268/387 (69.25%), Postives = 292/387 (75.45%), Query Frame = 0


Query: 1   MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 60
           M SDGSCQ VIALNMED TLHRF ++ TILATGGYGRAYFS TSAHTCTGDGNAMVARAG
Sbjct: 214 MASDGSCQGVIALNMEDGTLHRFRSSQTILATGGYGRAYFSATSAHTCTGDGNAMVARAG 273

Query: 61  LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIKG--------RCLKIHDYGNSRGSWH 120
           LPL+DLEFVQFHPTGIYGAGCLIT+GSRGEG  ++         R         SR    
Sbjct: 274 LPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVS 333

Query: 121 RTI-------------KDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLP 180
           R++             KDHIYLHLNHLPP+VLKERLP ISETAAIFAGVDVT++PIPVLP
Sbjct: 334 RSMTMEIREGRGVGPHKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLP 393

Query: 181 TVHYNMGGIPTNYRGQVVTIKGNDPD-------------------ANRLGANFL------ 240
           TVHYNMGGIPTNY G+VVTIKG+DPD                   ANRLGAN L      
Sbjct: 394 TVHYNMGGIPTNYHGEVVTIKGDDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVF 453

Query: 241 --CTSSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNA 300
               ++ +AEIS PG +Q PLEKDAG+KTIAWLD+LRNSNGSLPTS IRLNMQRIMQNNA
Sbjct: 454 GRACANRVAEISKPGEKQKPLEKDAGEKTIAWLDRLRNSNGSLPTSTIRLNMQRIMQNNA 513

Query: 301 AVFRTQETLEEECKLIDKAWESIHDVK------YMNSDSIDTIELENLLINACITMHSAE 334
           AVFRTQETLEE C+LIDKAWES  DV+        NSD I+T+ELENLLINA ITMHSAE
Sbjct: 514 AVFRTQETLEEGCQLIDKAWESFGDVQVKDRSMIWNSDLIETLELENLLINASITMHSAE 573

[Close]

BLAST of Csor.00g023780 vs. ExPASy Swiss-Prot
Match: Q9ZPX5 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH1-2 PE=1 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 2.6e-138
Identity = 259/387 (66.93%), Postives = 291/387 (75.19%), Query Frame = 0


Query: 1   MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 60
           MNSDG+CQ VIALNMED TLHRF A STILATGGYGRAYFS TSAHTCTGDGNAMVARAG
Sbjct: 212 MNSDGTCQGVIALNMEDGTLHRFHAGSTILATGGYGRAYFSATSAHTCTGDGNAMVARAG 271

Query: 61  LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIK--------------GRCLKIHDYGN 120
           LPL+DLEFVQFHPTGIYGAGCLIT+G+RGEG  ++               R L   D  +
Sbjct: 272 LPLQDLEFVQFHPTGIYGAGCLITEGARGEGGILRNSEGEKFMDRYAPTARDLASRDVVS 331

Query: 121 -------SRGSWHRTIKDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLP 180
                   +G     +KD++YL+LNHLPP+VLKERLP ISETAAIFAGVDVT +PIPVLP
Sbjct: 332 RSMTMEIRQGRGAGPMKDYLYLYLNHLPPEVLKERLPGISETAAIFAGVDVTREPIPVLP 391

Query: 181 TVHYNMGGIPTNYRGQVVTIKGNDPD-------------------ANRLGANFL------ 240
           TVHYNMGGIPTNY G+V+T++G+DPD                   ANRLGAN L      
Sbjct: 392 TVHYNMGGIPTNYHGEVITLRGDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVF 451

Query: 241 --CTSSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNA 300
               ++ +AEI  PG +  PLEKDAG+K+I WLD++RNSNGSLPTSKIRLNMQR+MQNNA
Sbjct: 452 GRACANRVAEIQKPGEKLKPLEKDAGEKSIEWLDRIRNSNGSLPTSKIRLNMQRVMQNNA 511

Query: 301 AVFRTQETLEEECKLIDKAWESIHDVK------YMNSDSIDTIELENLLINACITMHSAE 334
           AVFRTQETLEE C LIDK W+S  DVK        NSD I+T+ELENLL+NACITMHSAE
Sbjct: 512 AVFRTQETLEEGCDLIDKTWDSFGDVKVTDRSMIWNSDLIETMELENLLVNACITMHSAE 571

[Close]

BLAST of Csor.00g023780 vs. ExPASy Swiss-Prot
Match: Q7ZVF3 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Danio rerio OX=7955 GN=sdha PE=2 SV=2)

HSP 1 Score: 360.5 bits (924), Expect = 2.0e-98
Identity = 205/400 (51.25%), Postives = 258/400 (64.50%), Query Frame = 0


Query: 4   DGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAGLPL 63
           DG C+ VIAL MED ++HRF A +T++ATGGYGR +FS TSAHT TGDGNAMV RAGLP 
Sbjct: 225 DGECKGVIALCMEDGSIHRFRAKNTVIATGGYGRTFFSCTSAHTSTGDGNAMVTRAGLPC 284

Query: 64  EDLEFVQFHPTGIYGAGCLITKGSRGEGSCI---KGRCLKIHDYGNSRGSWHRTI----- 123
           +DLEFVQFHPTGIYGAGCLIT+G RGEG  +   +G         N++    R +     
Sbjct: 285 QDLEFVQFHPTGIYGAGCLITEGCRGEGGILINSEGERFMERYAPNAKDLASRDVVSRSM 344

Query: 124 -------------KDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLPTVH 183
                        KDH++L L+HLPP  L  RLP ISETA IFAGVDVT++PIPVLPTVH
Sbjct: 345 TIEIREGRGVGPDKDHVHLQLHHLPPQQLAARLPGISETAMIFAGVDVTKEPIPVLPTVH 404

Query: 184 YNMGGIPTNYRGQVVTIK-GND-----------------PDANRLGANFL--------CT 243
           YNMGGIPTNY+GQV+T K G D                   ANRLGAN L          
Sbjct: 405 YNMGGIPTNYKGQVITYKDGQDHVVPGLYACGEAGCASVHGANRLGANSLLDLVVFGRAC 464

Query: 244 SSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNAAVFR 303
           +  IAEI +PG + +PL+ +AG+ ++A LDK+R +NGS  TS+IRLNMQ+ MQ++AAVFR
Sbjct: 465 ALTIAEIDTPGEKLSPLKPNAGEASVANLDKMRYANGSTRTSEIRLNMQKTMQSHAAVFR 524

Query: 304 TQETLEEECKLIDKAWESIHDVK------YMNSDSIDTIELENLLINACITMHSAEARKE 334
           T + L+E C  ++  ++S+ D+K        N+D ++T+EL+NL++NA  T+ SAEARKE
Sbjct: 525 TGDVLKEGCVKMESVYKSMDDIKTFDRGIVWNTDLVETLELQNLMLNAVQTIVSAEARKE 584

[Close]

BLAST of Csor.00g023780 vs. ExPASy Swiss-Prot
Match: P47052 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YJL045W PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 2.6e-98
Identity = 208/388 (53.61%), Postives = 248/388 (63.92%), Query Frame = 0


Query: 1   MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 60
           +  +G    VIA N ED T+HRF A  T++ATGGYGRAYFS TSAHTCTGDGNAMV+RAG
Sbjct: 210 LTHNGEVVGVIAYNQEDGTIHRFRAHKTVIATGGYGRAYFSCTSAHTCTGDGNAMVSRAG 269

Query: 61  LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIKG--------RCLKIHDYGNSRGSWH 120
            PLEDLEFVQFHP+GIYG+GCLIT+G+RGEG  +          R         SR    
Sbjct: 270 FPLEDLEFVQFHPSGIYGSGCLITEGARGEGGFLLNSEGERFMERYAPTAKDLASRDVVS 329

Query: 121 RTI-------------KDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLP 180
           R I             KDHI L L+HLPP+VLKERLP ISETAA+FAGVDVT++PIPVLP
Sbjct: 330 RAITMEIRAGRGVGKNKDHILLQLSHLPPEVLKERLPGISETAAVFAGVDVTQEPIPVLP 389

Query: 181 TVHYNMGGIPTNYRGQVVTI---KGNDP-----------------DANRLGANFL----- 240
           TVHYNMGGIPT + G+ +TI    G D                   ANRLGAN L     
Sbjct: 390 TVHYNMGGIPTKWTGEALTIDEETGEDKVIPGLMACGEAACVSVHGANRLGANSLLDLVV 449

Query: 241 ---CTSSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNN 300
                ++ IA+   PG    PL  + G ++IA LDK+RN+ GSL TS+IRLNMQR MQ +
Sbjct: 450 FGRAVANTIADTLQPGLPHKPLASNIGHESIANLDKVRNARGSLKTSQIRLNMQRTMQKD 509

Query: 301 AAVFRTQETLEEECKLI---DKAWESIH---DVKYMNSDSIDTIELENLLINACITMHSA 334
            +VFRTQ+TL+E  + I   DK +E +H        NSD ++T+EL+NLL  A  T  SA
Sbjct: 510 VSVFRTQDTLDEGVRNITEVDKTFEDVHVSDKSMIWNSDLVETLELQNLLTCATQTAVSA 569

[Close]

BLAST of Csor.00g023780 vs. NCBI nr
Match: KAG6600613.1 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 681 bits (1758), Expect = 2.08e-247
Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 0


Query: 1   MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 60
           MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG
Sbjct: 1   MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 60

Query: 61  LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIKGRCLKIHDYGNSRGSWHRTIKDHIY 120
           LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIKGRCLKIHDYGNSRGSWHRTIKDHIY
Sbjct: 61  LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIKGRCLKIHDYGNSRGSWHRTIKDHIY 120

Query: 121 LHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLPTVHYNMGGIPTNYRGQVVTIK 180
           LHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLPTVHYNMGGIPTNYRGQVVTIK
Sbjct: 121 LHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLPTVHYNMGGIPTNYRGQVVTIK 180

Query: 181 GNDPDANRLGANFLCTSSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKI 240
           GNDPDANRLGANFLCTSSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKI
Sbjct: 181 GNDPDANRLGANFLCTSSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKI 240

Query: 241 RLNMQRIMQNNAAVFRTQETLEEECKLIDKAWESIHDVKYMNSDSIDTIELENLLINACI 300
           RLNMQRIMQNNAAVFRTQETLEEECKLIDKAWESIHDVKYMNSDSIDTIELENLLINACI
Sbjct: 241 RLNMQRIMQNNAAVFRTQETLEEECKLIDKAWESIHDVKYMNSDSIDTIELENLLINACI 300

Query: 301 TMHSAEARKESRGAHAREDFTKRDDENWMKHTLE 334
           TMHSAEARKESRGAHAREDFTKRDDENWMKHTLE
Sbjct: 301 TMHSAEARKESRGAHAREDFTKRDDENWMKHTLE 334

[Close]

BLAST of Csor.00g023780 vs. NCBI nr
Match: KAG7031247.1 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 523 bits (1348), Expect = 3.06e-181
Identity = 288/366 (78.69%), Postives = 294/366 (80.33%), Query Frame = 0


Query: 1   MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 60
           MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG
Sbjct: 188 MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 247

Query: 61  LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCI---KGRCLKIH--------------- 120
           LPLEDLEFVQFHPTGIYGAGCLITKGSRGEG  +   KG C                   
Sbjct: 248 LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGGILRNSKGECFMERYAPTAKDLASRDVVS 307

Query: 121 -----DYGNSRG-SWHRTIKDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIP 180
                +    RG + +RTIKDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIP
Sbjct: 308 RSMTMEIREGRGIALNRTIKDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIP 367

Query: 181 VLPTVHYNMGGIPTNYRGQ-------------VVTIKGNDPDANRLGAN-FL-------C 240
           VLPTVHYNMGGIPTNYRGQ             V         ANRLGAN FL        
Sbjct: 368 VLPTVHYNMGGIPTNYRGQLQSRAMIQMLIGLVQIFCAPVHGANRLGANSFLDIVVFGRA 427

Query: 241 TSSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNAAVF 300
            ++ IAEIS   ARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNAAVF
Sbjct: 428 CANRIAEIS---ARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNAAVF 487

Query: 301 RTQETLEEECKLIDKAWESIHDVKYMNSDSIDTIELENLLINACITMHSAEARKESRGAH 321
           RTQETLEEECKLIDKAWESIHDVKYMNSDSIDTIELENLLINACITMHSAEARKESRGAH
Sbjct: 488 RTQETLEEECKLIDKAWESIHDVKYMNSDSIDTIELENLLINACITMHSAEARKESRGAH 547

[Close]

BLAST of Csor.00g023780 vs. NCBI nr
Match: PKI58682.1 (hypothetical protein CRG98_020948 [Punica granatum])

HSP 1 Score: 518 bits (1333), Expect = 8.72e-180
Identity = 275/375 (73.33%), Postives = 295/375 (78.67%), Query Frame = 0


Query: 1   MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 60
           MNSDGSCQ VIALNMED TLHRF AASTILATGGYGRAYFS TSAHTCTGDGNAMVARAG
Sbjct: 113 MNSDGSCQGVIALNMEDGTLHRFHAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAG 172

Query: 61  LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIK---GRCLKIHDYGNS------RGSW 120
           LPL+DLEFVQFHPTGIYGAGCLIT+GSRGEG  ++   G     H    S       G  
Sbjct: 173 LPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMEHVVSRSMTMEIREGRG 232

Query: 121 HRTIKDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLPTVHYNMGGIPTN 180
              +KDHIYLHLNHLPPDVLKERLP ISETAAIFAGVDVT++PIPVLPTVHYNMGGIPTN
Sbjct: 233 VGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTN 292

Query: 181 YRGQVVTIKGNDPDA-------------------NRLGANFL--------CTSSWIAEIS 240
           Y G+VVTIKGNDPDA                   NRLGAN L          ++ +AEI 
Sbjct: 293 YHGEVVTIKGNDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIH 352

Query: 241 SPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNAAVFRTQETLEEE 300
            PG +Q PLEKDAG+KTI+WLDK+RNSNGSLPTSKIRLNMQR+MQNNAAVFRTQETLEE 
Sbjct: 353 RPGEKQKPLEKDAGEKTISWLDKIRNSNGSLPTSKIRLNMQRVMQNNAAVFRTQETLEEG 412

Query: 301 CKLIDKAWESIHDVKYM------NSDSIDTIELENLLINACITMHSAEARKESRGAHARE 333
           C+LIDKAWES HDVK        NSD I+T+ELENLLINA ITMHSAEARKESRGAHARE
Sbjct: 413 CQLIDKAWESFHDVKLKDRTLIWNSDLIETLELENLLINASITMHSAEARKESRGAHARE 472

[Close]

BLAST of Csor.00g023780 vs. NCBI nr
Match: XP_008453738.1 (PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial [Cucumis melo] >KAA0044748.1 succinate dehydrogenase (ubiquinone) flavoprotein subunit 1 [Cucumis melo var. makuwa] >TYK16714.1 succinate dehydrogenase (ubiquinone) flavoprotein subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 521 bits (1342), Expect = 1.68e-179
Identity = 280/387 (72.35%), Postives = 299/387 (77.26%), Query Frame = 0


Query: 1   MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 60
           MNSDGSCQ VIALNMED TLHRF AASTILATGGYGRAYFS TSAHTCTGDGNAMVARAG
Sbjct: 215 MNSDGSCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAG 274

Query: 61  LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIKG--------------RCLKIHDYGN 120
           LPLEDLEFVQFHPTGIYGAGCLIT+GSRGEG  ++               + L   D  +
Sbjct: 275 LPLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVS 334

Query: 121 S-------RGSWHRTIKDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLP 180
                    G     +KDHIYLHLNHLPPDVLKERLP ISETAAIFAGVDVT++PIPVLP
Sbjct: 335 RSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLP 394

Query: 181 TVHYNMGGIPTNYRGQVVTIKGNDPDA-------------------NRLGANFL------ 240
           TVHYNMGGIPTN+ G+VVTIKGNDPDA                   NRLGAN L      
Sbjct: 395 TVHYNMGGIPTNHHGEVVTIKGNDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVF 454

Query: 241 --CTSSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNA 300
               ++ +AEI  PGA+Q PLEKDAG+KTIAWLDKLRN+NGSLPTSKIRLNMQRIMQNNA
Sbjct: 455 GRACANRVAEIGRPGAKQKPLEKDAGEKTIAWLDKLRNANGSLPTSKIRLNMQRIMQNNA 514

Query: 301 AVFRTQETLEEECKLIDKAWESIHDVKYM------NSDSIDTIELENLLINACITMHSAE 333
           AVFRTQETLEE CKLIDKAWES HDV+        N+D I+TIELENLLINACITMHSAE
Sbjct: 515 AVFRTQETLEEGCKLIDKAWESFHDVQVKDRNLIWNTDLIETIELENLLINACITMHSAE 574

[Close]

BLAST of Csor.00g023780 vs. NCBI nr
Match: XP_022136565.1 (succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Momordica charantia])

HSP 1 Score: 520 bits (1340), Expect = 3.06e-179
Identity = 279/387 (72.09%), Postives = 297/387 (76.74%), Query Frame = 0


Query: 1   MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 60
           MNSDGSCQ VIALNMED TLHRF AASTILATGGYGRAYFS TSAHTCTGDGNAMVARAG
Sbjct: 212 MNSDGSCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAG 271

Query: 61  LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIKG--------------RCLKIHDYGN 120
           LPLEDLEFVQFHPTGIYGAGCLIT+GSRGEG  ++               + L   D  +
Sbjct: 272 LPLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVS 331

Query: 121 S-------RGSWHRTIKDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLP 180
                    G     +KDHIYLHLNHLPPDVLKERLP ISETAAIFAGVDVT++PIPVLP
Sbjct: 332 RSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLP 391

Query: 181 TVHYNMGGIPTNYRGQVVTIKGNDPDA-------------------NRLGANFL------ 240
           TVHYNMGG+PTN+ G+VVTIKGNDPDA                   NRLGAN L      
Sbjct: 392 TVHYNMGGVPTNHHGEVVTIKGNDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVF 451

Query: 241 --CTSSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNA 300
               ++ +AEI  PGA Q PLEKDAG+KTIAWLDKLRNSNGSLPTSKIRLNMQR+MQ NA
Sbjct: 452 GRACANRVAEIGRPGASQKPLEKDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQTNA 511

Query: 301 AVFRTQETLEEECKLIDKAWESIHDVKYM------NSDSIDTIELENLLINACITMHSAE 333
           AVFRTQETLEE CKLIDKAWES HDVK        NSD ++TIELENLLINACITMHSAE
Sbjct: 512 AVFRTQETLEEGCKLIDKAWESFHDVKVKDRNLIWNSDLVETIELENLLINACITMHSAE 571

[Close]

BLAST of Csor.00g023780 vs. ExPASy TrEMBL
Match: A0A2I0JQW7 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Punica granatum OX=22663 GN=CRG98_020948 PE=3 SV=1)

HSP 1 Score: 518 bits (1333), Expect = 4.22e-180
Identity = 275/375 (73.33%), Postives = 295/375 (78.67%), Query Frame = 0


Query: 1   MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 60
           MNSDGSCQ VIALNMED TLHRF AASTILATGGYGRAYFS TSAHTCTGDGNAMVARAG
Sbjct: 113 MNSDGSCQGVIALNMEDGTLHRFHAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAG 172

Query: 61  LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIK---GRCLKIHDYGNS------RGSW 120
           LPL+DLEFVQFHPTGIYGAGCLIT+GSRGEG  ++   G     H    S       G  
Sbjct: 173 LPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMEHVVSRSMTMEIREGRG 232

Query: 121 HRTIKDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLPTVHYNMGGIPTN 180
              +KDHIYLHLNHLPPDVLKERLP ISETAAIFAGVDVT++PIPVLPTVHYNMGGIPTN
Sbjct: 233 VGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTN 292

Query: 181 YRGQVVTIKGNDPDA-------------------NRLGANFL--------CTSSWIAEIS 240
           Y G+VVTIKGNDPDA                   NRLGAN L          ++ +AEI 
Sbjct: 293 YHGEVVTIKGNDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIH 352

Query: 241 SPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNAAVFRTQETLEEE 300
            PG +Q PLEKDAG+KTI+WLDK+RNSNGSLPTSKIRLNMQR+MQNNAAVFRTQETLEE 
Sbjct: 353 RPGEKQKPLEKDAGEKTISWLDKIRNSNGSLPTSKIRLNMQRVMQNNAAVFRTQETLEEG 412

Query: 301 CKLIDKAWESIHDVKYM------NSDSIDTIELENLLINACITMHSAEARKESRGAHARE 333
           C+LIDKAWES HDVK        NSD I+T+ELENLLINA ITMHSAEARKESRGAHARE
Sbjct: 413 CQLIDKAWESFHDVKLKDRTLIWNSDLIETLELENLLINASITMHSAEARKESRGAHARE 472

[Close]

BLAST of Csor.00g023780 vs. ExPASy TrEMBL
Match: A0A5D3D0G2 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005490 PE=3 SV=1)

HSP 1 Score: 521 bits (1342), Expect = 8.12e-180
Identity = 280/387 (72.35%), Postives = 299/387 (77.26%), Query Frame = 0


Query: 1   MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 60
           MNSDGSCQ VIALNMED TLHRF AASTILATGGYGRAYFS TSAHTCTGDGNAMVARAG
Sbjct: 215 MNSDGSCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAG 274

Query: 61  LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIKG--------------RCLKIHDYGN 120
           LPLEDLEFVQFHPTGIYGAGCLIT+GSRGEG  ++               + L   D  +
Sbjct: 275 LPLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVS 334

Query: 121 S-------RGSWHRTIKDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLP 180
                    G     +KDHIYLHLNHLPPDVLKERLP ISETAAIFAGVDVT++PIPVLP
Sbjct: 335 RSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLP 394

Query: 181 TVHYNMGGIPTNYRGQVVTIKGNDPDA-------------------NRLGANFL------ 240
           TVHYNMGGIPTN+ G+VVTIKGNDPDA                   NRLGAN L      
Sbjct: 395 TVHYNMGGIPTNHHGEVVTIKGNDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVF 454

Query: 241 --CTSSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNA 300
               ++ +AEI  PGA+Q PLEKDAG+KTIAWLDKLRN+NGSLPTSKIRLNMQRIMQNNA
Sbjct: 455 GRACANRVAEIGRPGAKQKPLEKDAGEKTIAWLDKLRNANGSLPTSKIRLNMQRIMQNNA 514

Query: 301 AVFRTQETLEEECKLIDKAWESIHDVKYM------NSDSIDTIELENLLINACITMHSAE 333
           AVFRTQETLEE CKLIDKAWES HDV+        N+D I+TIELENLLINACITMHSAE
Sbjct: 515 AVFRTQETLEEGCKLIDKAWESFHDVQVKDRNLIWNTDLIETIELENLLINACITMHSAE 574

[Close]

BLAST of Csor.00g023780 vs. ExPASy TrEMBL
Match: A0A1S3BY61 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103494381 PE=3 SV=1)

HSP 1 Score: 521 bits (1342), Expect = 8.12e-180
Identity = 280/387 (72.35%), Postives = 299/387 (77.26%), Query Frame = 0


Query: 1   MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 60
           MNSDGSCQ VIALNMED TLHRF AASTILATGGYGRAYFS TSAHTCTGDGNAMVARAG
Sbjct: 215 MNSDGSCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAG 274

Query: 61  LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIKG--------------RCLKIHDYGN 120
           LPLEDLEFVQFHPTGIYGAGCLIT+GSRGEG  ++               + L   D  +
Sbjct: 275 LPLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVS 334

Query: 121 S-------RGSWHRTIKDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLP 180
                    G     +KDHIYLHLNHLPPDVLKERLP ISETAAIFAGVDVT++PIPVLP
Sbjct: 335 RSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLP 394

Query: 181 TVHYNMGGIPTNYRGQVVTIKGNDPDA-------------------NRLGANFL------ 240
           TVHYNMGGIPTN+ G+VVTIKGNDPDA                   NRLGAN L      
Sbjct: 395 TVHYNMGGIPTNHHGEVVTIKGNDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVF 454

Query: 241 --CTSSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNA 300
               ++ +AEI  PGA+Q PLEKDAG+KTIAWLDKLRN+NGSLPTSKIRLNMQRIMQNNA
Sbjct: 455 GRACANRVAEIGRPGAKQKPLEKDAGEKTIAWLDKLRNANGSLPTSKIRLNMQRIMQNNA 514

Query: 301 AVFRTQETLEEECKLIDKAWESIHDVKYM------NSDSIDTIELENLLINACITMHSAE 333
           AVFRTQETLEE CKLIDKAWES HDV+        N+D I+TIELENLLINACITMHSAE
Sbjct: 515 AVFRTQETLEEGCKLIDKAWESFHDVQVKDRNLIWNTDLIETIELENLLINACITMHSAE 574

[Close]

BLAST of Csor.00g023780 vs. ExPASy TrEMBL
Match: A0A6J1C499 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111008239 PE=3 SV=1)

HSP 1 Score: 520 bits (1340), Expect = 1.48e-179
Identity = 279/387 (72.09%), Postives = 297/387 (76.74%), Query Frame = 0


Query: 1   MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 60
           MNSDGSCQ VIALNMED TLHRF AASTILATGGYGRAYFS TSAHTCTGDGNAMVARAG
Sbjct: 212 MNSDGSCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAG 271

Query: 61  LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIKG--------------RCLKIHDYGN 120
           LPLEDLEFVQFHPTGIYGAGCLIT+GSRGEG  ++               + L   D  +
Sbjct: 272 LPLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVS 331

Query: 121 S-------RGSWHRTIKDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLP 180
                    G     +KDHIYLHLNHLPPDVLKERLP ISETAAIFAGVDVT++PIPVLP
Sbjct: 332 RSMTMEIREGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLP 391

Query: 181 TVHYNMGGIPTNYRGQVVTIKGNDPDA-------------------NRLGANFL------ 240
           TVHYNMGG+PTN+ G+VVTIKGNDPDA                   NRLGAN L      
Sbjct: 392 TVHYNMGGVPTNHHGEVVTIKGNDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVF 451

Query: 241 --CTSSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNA 300
               ++ +AEI  PGA Q PLEKDAG+KTIAWLDKLRNSNGSLPTSKIRLNMQR+MQ NA
Sbjct: 452 GRACANRVAEIGRPGASQKPLEKDAGEKTIAWLDKLRNSNGSLPTSKIRLNMQRVMQTNA 511

Query: 301 AVFRTQETLEEECKLIDKAWESIHDVKYM------NSDSIDTIELENLLINACITMHSAE 333
           AVFRTQETLEE CKLIDKAWES HDVK        NSD ++TIELENLLINACITMHSAE
Sbjct: 512 AVFRTQETLEEGCKLIDKAWESFHDVKVKDRNLIWNSDLVETIELENLLINACITMHSAE 571

[Close]

BLAST of Csor.00g023780 vs. ExPASy TrEMBL
Match: A0A6P6BDX6 (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Durio zibethinus OX=66656 GN=LOC111317178 PE=3 SV=1)

HSP 1 Score: 513 bits (1321), Expect = 1.62e-178
Identity = 273/387 (70.54%), Postives = 297/387 (76.74%), Query Frame = 0


Query: 1   MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 60
           MN DGSCQ VIALNMED TLHRF AASTILATGGYGRAYFS TSAHTCTGDGNAMVARAG
Sbjct: 85  MNGDGSCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAG 144

Query: 61  LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIKG--------------RCLKIHDYGN 120
           LPL+DLEFVQFHPTGIYGAGCLIT+GSRGEG  ++               + L   D  +
Sbjct: 145 LPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVS 204

Query: 121 S-------RGSWHRTIKDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLP 180
                    G     +KDHIYLHLNHLPP+VLKERLP ISETAAIFAGVDVT++PIPVLP
Sbjct: 205 RSMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLP 264

Query: 181 TVHYNMGGIPTNYRGQVVTIKGNDPD-------------------ANRLGANFL------ 240
           TVHYNMGGIPTNY G+VVT++G+DPD                   ANRLGAN L      
Sbjct: 265 TVHYNMGGIPTNYHGEVVTVRGSDPDSVVPGLMAAGEAACASVHGANRLGANSLLDIVVF 324

Query: 241 --CTSSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNA 300
               ++ +AEI  PG +Q PL+KDAG+KT+AWLDK+RNSNGSLPTSKIRLNMQRIMQNNA
Sbjct: 325 GRACANRVAEIHRPGEKQKPLDKDAGEKTVAWLDKIRNSNGSLPTSKIRLNMQRIMQNNA 384

Query: 301 AVFRTQETLEEECKLIDKAWESIHDVKYM------NSDSIDTIELENLLINACITMHSAE 333
           AVFRTQETLEE C+LIDKAWES HDVK        NSD I+TIELENLLINACITMHSAE
Sbjct: 385 AVFRTQETLEEGCQLIDKAWESFHDVKLKDRTLIWNSDLIETIELENLLINACITMHSAE 444

[Close]

BLAST of Csor.00g023780 vs. TAIR 10
Match: AT5G66760.1 (succinate dehydrogenase 1-1 )

HSP 1 Score: 496.1 bits (1276), Expect = 2.2e-140
Identity = 268/387 (69.25%), Postives = 292/387 (75.45%), Query Frame = 0


Query: 1   MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 60
           M SDGSCQ VIALNMED TLHRF ++ TILATGGYGRAYFS TSAHTCTGDGNAMVARAG
Sbjct: 214 MASDGSCQGVIALNMEDGTLHRFRSSQTILATGGYGRAYFSATSAHTCTGDGNAMVARAG 273

Query: 61  LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIKG--------RCLKIHDYGNSRGSWH 120
           LPL+DLEFVQFHPTGIYGAGCLIT+GSRGEG  ++         R         SR    
Sbjct: 274 LPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVS 333

Query: 121 RTI-------------KDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLP 180
           R++             KDHIYLHLNHLPP+VLKERLP ISETAAIFAGVDVT++PIPVLP
Sbjct: 334 RSMTMEIREGRGVGPHKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLP 393

Query: 181 TVHYNMGGIPTNYRGQVVTIKGNDPD-------------------ANRLGANFL------ 240
           TVHYNMGGIPTNY G+VVTIKG+DPD                   ANRLGAN L      
Sbjct: 394 TVHYNMGGIPTNYHGEVVTIKGDDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVF 453

Query: 241 --CTSSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNA 300
               ++ +AEIS PG +Q PLEKDAG+KTIAWLD+LRNSNGSLPTS IRLNMQRIMQNNA
Sbjct: 454 GRACANRVAEISKPGEKQKPLEKDAGEKTIAWLDRLRNSNGSLPTSTIRLNMQRIMQNNA 513

Query: 301 AVFRTQETLEEECKLIDKAWESIHDVK------YMNSDSIDTIELENLLINACITMHSAE 334
           AVFRTQETLEE C+LIDKAWES  DV+        NSD I+T+ELENLLINA ITMHSAE
Sbjct: 514 AVFRTQETLEEGCQLIDKAWESFGDVQVKDRSMIWNSDLIETLELENLLINASITMHSAE 573

[Close]

BLAST of Csor.00g023780 vs. TAIR 10
Match: AT2G18450.1 (succinate dehydrogenase 1-2 )

HSP 1 Score: 493.0 bits (1268), Expect = 1.8e-139
Identity = 259/387 (66.93%), Postives = 291/387 (75.19%), Query Frame = 0


Query: 1   MNSDGSCQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAG 60
           MNSDG+CQ VIALNMED TLHRF A STILATGGYGRAYFS TSAHTCTGDGNAMVARAG
Sbjct: 212 MNSDGTCQGVIALNMEDGTLHRFHAGSTILATGGYGRAYFSATSAHTCTGDGNAMVARAG 271

Query: 61  LPLEDLEFVQFHPTGIYGAGCLITKGSRGEGSCIK--------------GRCLKIHDYGN 120
           LPL+DLEFVQFHPTGIYGAGCLIT+G+RGEG  ++               R L   D  +
Sbjct: 272 LPLQDLEFVQFHPTGIYGAGCLITEGARGEGGILRNSEGEKFMDRYAPTARDLASRDVVS 331

Query: 121 -------SRGSWHRTIKDHIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLP 180
                   +G     +KD++YL+LNHLPP+VLKERLP ISETAAIFAGVDVT +PIPVLP
Sbjct: 332 RSMTMEIRQGRGAGPMKDYLYLYLNHLPPEVLKERLPGISETAAIFAGVDVTREPIPVLP 391

Query: 181 TVHYNMGGIPTNYRGQVVTIKGNDPD-------------------ANRLGANFL------ 240
           TVHYNMGGIPTNY G+V+T++G+DPD                   ANRLGAN L      
Sbjct: 392 TVHYNMGGIPTNYHGEVITLRGDDPDAVVPGLMAAGEAACASVHGANRLGANSLLDIVVF 451

Query: 241 --CTSSWIAEISSPGARQNPLEKDAGKKTIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNA 300
               ++ +AEI  PG +  PLEKDAG+K+I WLD++RNSNGSLPTSKIRLNMQR+MQNNA
Sbjct: 452 GRACANRVAEIQKPGEKLKPLEKDAGEKSIEWLDRIRNSNGSLPTSKIRLNMQRVMQNNA 511

Query: 301 AVFRTQETLEEECKLIDKAWESIHDVK------YMNSDSIDTIELENLLINACITMHSAE 334
           AVFRTQETLEE C LIDK W+S  DVK        NSD I+T+ELENLL+NACITMHSAE
Sbjct: 512 AVFRTQETLEEGCDLIDKTWDSFGDVKVTDRSMIWNSDLIETMELENLLVNACITMHSAE 571

[Close]

BLAST of Csor.00g023780 vs. TAIR 10
Match: AT5G14760.1 (L-aspartate oxidase )

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-23
Identity = 99/367 (26.98%), Postives = 164/367 (44.69%), Query Frame = 0


Query: 7   CQEVIALNMEDSTLHRFGAASTILATGGYGRAYFSPTSAHTCTGDGNAMVARAGLPLEDL 66
           C  V  LN++ + + RF +  T+LA+GG G  Y S T+    TGDG AM  RA   + ++
Sbjct: 248 CHGVDTLNIKTNEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGMAMAHRAQAVISNM 307

Query: 67  EFVQFHPTGIYGAGC------------LITKGSRGEGSCIKG----RCLKIHDYGNS--- 126
           EFVQFHPT +   G             LIT+  RG+G  +      R + ++D       
Sbjct: 308 EFVQFHPTALADEGLPIKLQTARENAFLITEAVRGDGGILYNLGMERFMPVYDERAELAP 367

Query: 127 RGSWHRTIKD--------HIYLHLNHLPPDVLKERLPSISETAAIFAGVDVTEKPIPVLP 186
           R    R+I D        ++ L ++H P + +    P+I+ +  +  G+D+T +PIPV+P
Sbjct: 368 RDVVARSIDDQLKKRNEKYVLLDISHKPREKILAHFPNIA-SECLKHGLDITRQPIPVVP 427

Query: 187 TVHYNMGGIPTNYRGQV----VTIKGNDPDANRLGANFLCTSSWIAEI---------SSP 246
             HY  GG+    +G+     + + G        GAN L ++S +  +         S+ 
Sbjct: 428 AAHYMCGGVRAGLQGETNVLGLFVAGEVACTGLHGANRLASNSLLEALVFARRAVQPSTE 487

Query: 247 GARQNPLEKDAGKK-------TIAWLDKLRNSNGSLPTSKIRLNMQRIMQNNAAVFRTQ- 306
             ++  L+  A +K       T   L     +     T ++R  +Q +M     + R+  
Sbjct: 488 LMKRTRLDVCASEKWTRPVVATARLLGDEVIAKIIALTKEVRRELQEVMWKYVGIVRSTI 547

Query: 307 --ETLEEECKLIDKAWESI---HDVKYMNSDSIDTIELENLLINACITMHSAEARKESRG 321
              T E +   ++  WE+    H  +     +++  E+ NL   A + + SA AR ESRG
Sbjct: 548 RLTTAERKIAELEAKWETFLFEHGWE-QTVVALEACEMRNLFCCAKLVVSSALARHESRG 607

The following BLAST results are available for this feature:

BLAST of Csor.00g023780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6ZDY8	1.2e-140	68.48	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Oryz...	[more]
O82663	3.1e-139	69.25	Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial OS=Ar...	[more]
Q9ZPX5	2.6e-138	66.93	Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial OS=Ar...	[more]
Q7ZVF3	2.0e-98	51.25	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Dani...	[more]
P47052	2.6e-98	53.61	Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial OS=Sa...	[more]

BLAST of Csor.00g023780 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600613.1	2.08e-247	100.00	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, partia...	[more]
KAG7031247.1	3.06e-181	78.69	Succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial, part...	[more]
PKI58682.1	8.72e-180	73.33	hypothetical protein CRG98_020948 [Punica granatum]	[more]
XP_008453738.1	1.68e-179	72.35	PREDICTED: succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochon...	[more]
XP_022136565.1	3.06e-179	72.09	succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Momord...	[more]

BLAST of Csor.00g023780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2I0JQW7	4.22e-180	73.33	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Puni...	[more]
A0A5D3D0G2	8.12e-180	72.35	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Cucu...	[more]
A0A1S3BY61	8.12e-180	72.35	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Cucu...	[more]
A0A6J1C499	1.48e-179	72.09	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Momo...	[more]
A0A6P6BDX6	1.62e-178	70.54	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial OS=Duri...	[more]

BLAST of Csor.00g023780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66760.1	2.2e-140	69.25	succinate dehydrogenase 1-1	[more]
AT2G18450.1	1.8e-139	66.93	succinate dehydrogenase 1-2	[more]
AT5G14760.1	1.3e-23	26.98	L-aspartate oxidase	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015939	Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal	PFAM	PF02910	Succ_DH_flav_C	coord: 241..333 e-value: 9.2E-29 score: 100.1
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 3..178 e-value: 5.5E-50 score: 172.4
IPR036188	FAD/NAD(P)-binding domain superfamily	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 4..181
IPR003953	FAD-dependent oxidoreductase 2, FAD binding domain	PFAM	PF00890	FAD_binding_2	coord: 4..178 e-value: 6.4E-36 score: 124.3
None	No IPR available	GENE3D	1.20.58.100		coord: 213..321 e-value: 1.8E-28 score: 101.1
None	No IPR available	PANTHER	PTHR11632:SF79	SUCCINATE DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN SUBUNIT, MITOCHONDRIAL	coord: 1..95
None	No IPR available	PANTHER	PTHR11632:SF79	SUCCINATE DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN SUBUNIT, MITOCHONDRIAL	coord: 114..186
None	No IPR available	PANTHER	PTHR11632:SF79	SUCCINATE DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN SUBUNIT, MITOCHONDRIAL	coord: 187..333
IPR027477	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily	GENE3D	3.90.700.10	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	coord: 76..158 e-value: 5.5E-50 score: 172.4
IPR027477	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily	SUPERFAMILY	56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	coord: 66..163
IPR030664	FAD-dependent oxidoreductase SdhA/FrdA/AprA	PANTHER	PTHR11632	SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT	coord: 187..333
IPR030664	FAD-dependent oxidoreductase SdhA/FrdA/AprA	PANTHER	PTHR11632	SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT	coord: 1..95
IPR030664	FAD-dependent oxidoreductase SdhA/FrdA/AprA	PANTHER	PTHR11632	SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT	coord: 114..186
IPR037099	Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily	SUPERFAMILY	46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	coord: 225..333

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g023780.m01	Csor.00g023780.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006121	mitochondrial electron transport, succinate to ubiquinone
biological_process	GO:0006099	tricarboxylic acid cycle
cellular_component	GO:0005749	mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0050660	flavin adenine dinucleotide binding
molecular_function	GO:0008177	succinate dehydrogenase (ubiquinone) activity
molecular_function	GO:0016491	oxidoreductase activity