Csor.00g023620 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g023620
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein SHI RELATED SEQUENCE 1-like
Location	Csor_Chr04: 3952833 .. 3958881 (-)
RNA-Seq Expression	Csor.00g023620
Synteny	Csor.00g023620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGTTTTTACCCACTAGGCGGCGGAAGAGAACCCAATTATCACCTTCCCACTACCACCACCACCACCACGGACGGATTATTTTGGTACAGAAATTATGAGAGCCTTGAAATATGGCAGCAACAGCAGGTGCAGCAGCAAGCGGGAGAAGGGTTTGTTTACTCGGGCGATGAATCGCCTCCAAGATCGTCGTTGGTGATGCTGAGATCCGGCAGAAACGGGGGAGGGCAAGTAATAAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAGGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGTCGTGGCTTTGACTGTGAAACCCACGTCAAAAGTACTTGGGTTCCGGCCTCCAAACGCCGTGAGCGACACCTCCGCAGCGACGGCACTAATCTCAAACGACCTCGAGACAACACCGCCGCTTCCTCAGGTACAATCAAATTAATTCTTGCTGTTTTCAATTTTTTTTTATATATATTTTATTTTATTTTTAGATTTCTTGTGAGGGAGGGCTTTGTTTTGGAAGTTTTTCCAAATTCCAGCAAGACCCACATCGATTTTGGTCATGATTGACAGAATCAATCTCTCCCTTTCTCTAAAATGGTCTCTTTTTTTTCTTTTTTCTCTTTTTAAAATTTTGGTTTTAGGGTTAGAAATGGGGAATTTTCCGGTGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTGCGAATGACAACGTTGGACGAAACCAACGACCAATTTGCTTACCAAACAGCCGTCAACATCGGAGGCCATACCTTCAAGGGCATTCTTTACGACCACGGCCCTGAACAACAACAACAACCACCACCACCACCACCACCCAACTCCGCCTCCCCCGACGGTGGCACCCTCCTCATCACCGCCCCCTCCACCACCATGGAATTGCCACCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCAGCTCCTCTGAACACCTACGTCGCCGCCGGTACGCAATTTTTTCTTCCCCCAACGTCTTAATGTCGTAATGAATTTTATGAGATCGAAGAGAATTAGCTGAAATTGAGAATGGAGAATGAAGGAAGTATGTGGCACGAGTATATAATTTTTTTTATCATAAATTTATAAGCTTTTAATTTTTCAAGAGTTCACATTAATGTGCCGCCATTGTTGGAACTTCGATGCTCCCTTTTTCCTTTTTTTTTTCTTTTTCCTTTCTTCTCGGTTTCGTATTTGGTAATTCTCAACCCCCTCAAACCCTTTTATTTTTAATTAATTATATGATTTCAATCTATTTTGATTGGTTATTTAATGTTTTATACCTATGTTTTAAATGAAATTTTGAATTTTAAAATTTAAATTACAAGTTTCAAAGGACAGAGATTATTAAAACGAGGAAATTATTCTATGTTTTTTTTTATATAAAAATAATGTGAACAGCATGTCAATCAATCACAATTAATGTATTTAGTGAATGAAAAATGTGAAATGCTGCAGCTAGACAACTATGAATGTGACCATTTCATTTTTTTTTTTACCAAAAAGAAAAAGGAAATTAATAGCTGTTATTTCAATAATTCAAAAATTTTATTCACCCTGTCTCTTTCTCTCCTATCCTATGCATCACTTTCATACACATTGTCACTCTAGTCATTTTTAGGCTGCATCTCGTGTTTAATATGCATTACATTTATGTACATACATCCCTTTTATGTCCTTAGAACATGCATCATTTTCATACAATCAAATATTATATGCATGAAGTCTTATTAGTATACATAACATGCGTATATATTTTCATTTTCATTTTTACCACATAACGTATATGTCATTATATTCAAACAATCGTATAAACATTTCGAAAAGCACCCAACCTAGCCCTAAGACTTTCTAGCAATAGATTTTCAACAATGAAATTAATTTTCCTTCAGCATATGGAAGCTTTGGTTCTATTGTAAATCACAATTTTAAATTAATTCGAATATTTAGGACGGGCGATTTAAAGAGTTTACCCGAACTCCATTAACCATATAAACTCTTAAAGAACAAAGGAAAACTTTTTAAGAACAAAAAGTTTAACCTCGAAAATGTAAAAGTCTTCTTGATCCTTTTACATTTTTTTCTTAACGGGTTAAGTATTAAAAATACCAAGTAAATCCACTATTTGAATTGAGATATGCAGTCGCATGCAACCATGACTTATGCTAACACGACTATAATAAGACATGCATTTCTTTATTTTTCTTTAGATGTGCATCACTTTCACACCGACAATCATAACTCATGCAACTATGACTACAAAAGAGTGCATAGTTGCAACATATTTAAGGTGATGGAGAAAGAATAAATCGAGAGGGAAAAAGAGTTAGAGCGAGAGAGACTTAGAGAGTTAGTGATTAACGGAGCTAAGATCTAACGACCCTACTTCTAGGACAAGACTCGTGGAAGGATTTAAAAGAAGGAAAAAAAAAACGTAACTTTATTTTTTTCTTAATCTATAAAATTCTTGGTCAAACCTTGAATCAACTATTTTTAAACCCAATTTTTTTCTTTTTTTTTTTTTTAAAAAAAAAAACAGAAGTCGCATGAGCACAATTAACTTAATTGACCAAAACATCTCAAAAGAGGATTGAGCCCAAAATTCAAAAGAAAAATAATCTAAAAATTAATCTCATTTTATTATTTTGACGGAAGAATTTAAGTAATTGATTAATTTGTTAAGAAGTAAAATGATAGACAAATGAATATAGTCCACCCAAAATGAATCACTAAGAACCTAATTTATTATACCATCTTTAGCAAACCAATAAAAAATATGGAAAAATATAGAAATAAATTACAAAATGAGATGAACGAATAAACTTTAATTCATCTATAATGTTTTATATTTTTTTTTTAACACAAAATCCAAAAACTAAAACGAAAAAAAAAAAAAAAAAATTGAAGGTATGAAATAGAGAAGCAGAAAAGAATGATGCAGGGAAGTGAACAAAGACGAACCTGCATTGACATTGGAACGACATGGAGGGTAAGACTTGAGTTGATGAAGAGATCAAAACAACCGGTGTTTGACGGTAGCAGAAATCTGTGACGGCGCCGGCGGATTGGGAAATGAAAGGAGATGAAACAGAGTGAGATCGATGAGGAGGGTGGAGGATTTGAAAGGGTTTTGTTTAAAATCCCAAATTTAACACTCACATTCTTGCATTGCATCATTAGCAATCATGAGCTTCTTCCTATGTTTTTTCTTTCACTCCTTTTAAATTGGTGAAGTTTTTTGAAAAAATAAAATAAATTTAATCTCTCAGTTTTTAATAATATATATAAATAATTATTTTAATATAAATCATCTTTGAGAAAAGTCAACTTTAAAGATAAATTGATTCTTCCATCAATTTCATTAGATTTCGCTGTTTATTGGATTGGCATCTACAATTAAAAGATATGAAGCAAGTTTGTATTGTTTTAAATCAAGAATGTTGGTATATTGTTTTTTGAAACTTAATTTGCAAAACAAAATTAAAATAAGAAACCAAAAAGAAAAGTTACCCAGGAAGAAGAAAAAAAAAGGAAAAATACACATGTGAGAAAACCCTAAAAAGTTGGAAAAGATGGTATGGGAGTGATGGAAAAAGGAGTAGGTTCTAGGAATCACGTGAAAGCAAAATGGAAGAAAAGAAGAAGAAGAGAAATAGGGGATTAGGGCATTAGGGCATTAGGGCATTAGGGTGGTGGCAGCACCAGTGGACTTTAATAATTAATAATCTCATGCCATAACACAATAGGGTATAGCATTTTCAGCACCTTCATAATTATTAACCACCACGGTTGATCTAAACATATTCAACTGTTTTGTGTTGGAAGAACAGAAGAAGAGAGAATTATGTGAAAATGTTATGTTTTTTTGGGTTTATCTTGTTTGGATTGAGCAACTCTTCTGAAAAAGCTTCAGGATTTGTGTGAATCCTTGGGCTAAGCTTGTATTATGACATAAATAATGGTGAAACAGCATAGTTTCTTGAGATTTTTATTGACCATATTGGGATTGGAACATTTTGAAATTGGTAAACCTACAAGTCTAAGGACTGTAAATTCTCATAGATTATGATGAAAAGCATTACAAAGTCTACATTAACAGTTGCGTTGTGTTCATCATCATTACAACACACAAACACACAAGTATTTTAATCTAAATGCTTCAATTCCTCAAAACCCATTGTTAAGTTTGGGAATCCGAGCGAGTTGACAGCACTGCCAATTCACTCCTTATGTAATAATTTGAACCCAAACCCTCCAAAATGGATAGCTTTTGGGTATACAGTTTGAGCCAAGAAATGGTAGAACTTGGGGTTGGAGAAGCACTATTGTTTGGGGGCCAACTCCTTTCAGCTCTCCCATTATGCCGTCTGGCAATGCCCCTTCAAACTTGACATAAACCAACCATTCAACAAATTTCACTGTTTTGGTCAGACCCCATTTTTAAGCAATAATTATACATTCTTACACTTCGCATTATTGCATTGTAGTGTACCAGAGATGCCTCAAAGTGCAATTCAATGTGTCTGTAGGTAGCAGGTCAGCTTTCAGATTCAGGGTAATTCTTAAAATTGAGCGAAACTGGTTTTTATTTTCAAAATAAAATGTATTTTTGACACCTAATTTTGTGAGAAAATGGGTAAAATGTCCTTTATGCCCCTAAAGCGGATAAACTATGAGCCTCTCTCGTTTCCGCCCAATTTTTTCTCCTCTCCTTTGTTTCTTGTCAATAAAGAACAAGAAAATCCGATCCAGTCGAAATTTCTCAGATTTCAGAGCTTTTCAATTCCAAAATCTTCAAGATCTTTCAAATTTGGGCTTGTGGGCGGCGGAAGAGTCGTCGCCGGCAGTGGGTACGTCTCGGTGAAGGAAGCTGGGAGAAGAGGTAAAACGAGAGAACTAAAATTTCTCCGCTACTGGTGCAAACCGATGAATTTGATCGGTTATCGGTAGGTCGTTCACACGATCTTTCTTCACCAAAATTGTTCCGATAGGTAACTTCTCTGAAAATCTGTTTTGTTCTTCAATTTCTTGCAGTAGCTTGCTTGTTTTACCAGTTTGATTTTCCTGGATGTTTGGGAGTTGAACAGCCTAGTTTCGTGCTTGTTTTCTGCGATTATCTCAATAAAGATTTCAGGGGATTAGCTGAGATTATGAAATTGGGATTGTTAAGCTTAGGTTAATTTTTAGTTGAACCTCTGTCAAATTGAGGGTTTTCAATTTCACTTCAGGAAGCATCTTATAACTCTGGAAATGGGATCAAGTAATGACCCTGAGAATCAAATGATGATAGAAGGAAATGTTGTTCAGAAAATGAAAATTGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCTTGGCTCATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTGATCTTGGACTTTGCAGGCCCCAATTTTGTTTGCGTGGACAACTTCACATTTGGAGCAGTCGCGCGGTATCTTCAAATCAACACAGACAAGGTAACTTTCGACAGGAACCTCTTTCCCTTTTGAAGTTCTTTCGCTCACACGACTAATTTGTTTGTTATCGGCTTTCAGTGCTGCATCTCAACTCATAGAAGTGAGGATGAATTCAGGGAAGTTGATAATGGTAGAGAAATATCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAATTCCAACACCGAGCCTACAATCTCTTAACTTGCAATTGTCATTCCTTTGTTGCTAACAATCTGAACAGACTTGGGTTTGTCACAGGTGGATGGAATGTGGTAAACCTTGCTGCTCTGATGTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTGATCCGGACGTTCTTACCATTTGGTGTGGTATTCAGTATAGGAGTTGCAATGGGGGGTACTACATTCCTAACTTTCTTGGCATTCTTCACTTTCTTCCTGGTTGGTTGGTTCGTTCTTGGTACTTATGTCTTCAAAAATTTGGTTCAGTTGTAA

mRNA sequence

ATGGCCGGTTTTTACCCACTAGGCGGCGGAAGAGAACCCAATTATCACCTTCCCACTACCACCACCACCACCACGGACGGATTATTTTGGTACAGAAATTATGAGAGCCTTGAAATATGGCAGCAACAGCAGGTGCAGCAGCAAGCGGGAGAAGGGTTTGTTTACTCGGGCGATGAATCGCCTCCAAGATCGTCGTTGGTGATGCTGAGATCCGGCAGAAACGGGGGAGGGCAAGTAATAAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAGGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGTCGTGGCTTTGACTGTGAAACCCACGTCAAAAGTACTTGGGTTCCGGCCTCCAAACGCCGTGAGCGACACCTCCGCAGCGACGGCACTAATCTCAAACGACCTCGAGACAACACCGCCGCTTCCTCAGGGTTAGAAATGGGGAATTTTCCGGTGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTGCGAATGACAACGTTGGACGAAACCAACGACCAATTTGCTTACCAAACAGCCGTCAACATCGGAGGCCATACCTTCAAGGGCATTCTTTACGACCACGGCCCTGAACAACAACAACAACCACCACCACCACCACCACCCAACTCCGCCTCCCCCGACGGTGGCACCCTCCTCATCACCGCCCCCTCCACCACCATGGAATTGCCACCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCAGCTCCTCTGAACACCTACGTCGCCGCCGTGTACCAGAGATGCCTCAAAGTGCAATTCAATGTGTCTGTAGGTAGCAGGTCAGCTTTCAGATTCAGGGTCGTTCACACGATCTTTCTTCACCAAAATTGTTCCGATAGGAAGCATCTTATAACTCTGGAAATGGGATCAAGTAATGACCCTGAGAATCAAATGATGATAGAAGGAAATGTTGTTCAGAAAATGAAAATTGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCTTGGCTCATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTGATCTTGGACTTTGCAGGCCCCAATTTTGTTTGCGTGGACAACTTCACATTTGGAGCAGTCGCGCGGTATCTTCAAATCAACACAGACAAGTGCTGCATCTCAACTCATAGAAGTGAGGATGAATTCAGGGAAGTTGATAATGGTAGAGAAATATCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAATTCCAACACCGAGCCTACAATCTCTTAACTTGCAATTGTCATTCCTTTGTTGCTAACAATCTGAACAGACTTGGGTTTGTCACAGGTGGATGGAATGTGGTAAACCTTGCTGCTCTGATGTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTGATCCGGACGTTCTTACCATTTGGTGTGGTATTCAGTATAGGAGTTGCAATGGGGGGTACTACATTCCTAACTTTCTTGGCATTCTTCACTTTCTTCCTGGTTGGTTGGTTCGTTCTTGGTACTTATGTCTTCAAAAATTTGGTTCAGTTGTAA

Coding sequence (CDS)

ATGGCCGGTTTTTACCCACTAGGCGGCGGAAGAGAACCCAATTATCACCTTCCCACTACCACCACCACCACCACGGACGGATTATTTTGGTACAGAAATTATGAGAGCCTTGAAATATGGCAGCAACAGCAGGTGCAGCAGCAAGCGGGAGAAGGGTTTGTTTACTCGGGCGATGAATCGCCTCCAAGATCGTCGTTGGTGATGCTGAGATCCGGCAGAAACGGGGGAGGGCAAGTAATAAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAGGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGTCGTGGCTTTGACTGTGAAACCCACGTCAAAAGTACTTGGGTTCCGGCCTCCAAACGCCGTGAGCGACACCTCCGCAGCGACGGCACTAATCTCAAACGACCTCGAGACAACACCGCCGCTTCCTCAGGGTTAGAAATGGGGAATTTTCCGGTGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTGCGAATGACAACGTTGGACGAAACCAACGACCAATTTGCTTACCAAACAGCCGTCAACATCGGAGGCCATACCTTCAAGGGCATTCTTTACGACCACGGCCCTGAACAACAACAACAACCACCACCACCACCACCACCCAACTCCGCCTCCCCCGACGGTGGCACCCTCCTCATCACCGCCCCCTCCACCACCATGGAATTGCCACCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCAGCTCCTCTGAACACCTACGTCGCCGCCGTGTACCAGAGATGCCTCAAAGTGCAATTCAATGTGTCTGTAGGTAGCAGGTCAGCTTTCAGATTCAGGGTCGTTCACACGATCTTTCTTCACCAAAATTGTTCCGATAGGAAGCATCTTATAACTCTGGAAATGGGATCAAGTAATGACCCTGAGAATCAAATGATGATAGAAGGAAATGTTGTTCAGAAAATGAAAATTGATCCGGAGAGAGCTCGGTTTCCATGTTGCATTGTGTGGACACCTCTTCCTGTTATTTCTTGGCTCATTCCTTTCATTGGTCACATTGGTATTGGCAGAGAGGATGGAGTGATCTTGGACTTTGCAGGCCCCAATTTTGTTTGCGTGGACAACTTCACATTTGGAGCAGTCGCGCGGTATCTTCAAATCAACACAGACAAGTGCTGCATCTCAACTCATAGAAGTGAGGATGAATTCAGGGAAGTTGATAATGGTAGAGAAATATCAACATGGGATGATGCATTGCGGAGGAGCACTCAAGAATTCCAACACCGAGCCTACAATCTCTTAACTTGCAATTGTCATTCCTTTGTTGCTAACAATCTGAACAGACTTGGGTTTGTCACAGGTGGATGGAATGTGGTAAACCTTGCTGCTCTGATGTTTCTCAAGGGTCGGTGGGTCAGTAAAGGAGCTGTGATCCGGACGTTCTTACCATTTGGTGTGGTATTCAGTATAGGAGTTGCAATGGGGGGTACTACATTCCTAACTTTCTTGGCATTCTTCACTTTCTTCCTGGTTGGTTGGTTCGTTCTTGGTACTTATGTCTTCAAAAATTTGGTTCAGTTGTAA

Protein sequence

MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAVYQRCLKVQFNVSVGSRSAFRFRVVHTIFLHQNCSDRKHLITLEMGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL

Homology

[Close]

BLAST of Csor.00g023620 vs. ExPASy Swiss-Prot
Match: Q9SD42 (Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.2e-74
Identity = 136/233 (58.37%), Postives = 173/233 (74.25%), Query Frame = 0


Query: 304 SSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVIL 363
           ++ D E++MMI   +   MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVIL
Sbjct: 4   TATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVIL 63

Query: 364 DFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDE---------FREVDNGREIST 423
           DFAGPNFVCVDNF FGAV+RY+QIN +   + + RS             +E D+  +  T
Sbjct: 64  DFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKEPT 123

Query: 424 WDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSK 483
           WDDALR+STQE+QH +YN+LTCNCHSFVANNLNRL   +GGWNVVNLA L+  KGRWV+K
Sbjct: 124 WDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVNK 183

Query: 484 GAVIRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 528
            A++++ LP  +V++IG+ +GG TF+   +     L GWF++GTY FK L+QL
Sbjct: 184 TAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]

BLAST of Csor.00g023620 vs. ExPASy Swiss-Prot
Match: F4ITL6 (Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RTE1 PE=1 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.3e-59
Identity = 113/210 (53.81%), Postives = 151/210 (71.90%), Query Frame = 0


Query: 323 KIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 382
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 383 RYLQINTDKCCI----STHRSEDEFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNC 442
           RYLQ++  KCC+      H  +  F+  D G    TWD+AL  ST+ F+H+ YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 443 HSFVANNLNRLGFVTGG---WNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAMG 502
           HSFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+GV + 
Sbjct: 163 HSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLV 222

Query: 503 GTTFLTFLAFFTFFLVGWFVLGTYVFKNLV 526
           G  FL  L+ F+  L  WF++ TY FKN++
Sbjct: 223 GWPFLIGLSSFSLLLFAWFIIATYCFKNII 249

[Close]

BLAST of Csor.00g023620 vs. ExPASy Swiss-Prot
Match: Q9XGX0 (Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.5e-47
Identity = 132/326 (40.49%), Postives = 175/326 (53.68%), Query Frame = 0


Query: 1   MAGFYPL---GGGREPNYHLPTT---TTTTTDGLFWYRNYES--------------LEIW 60
           MAGF+ L   GGG  P+ H   T   +++ T+   W RN  S              LE+W
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTLELW 60

Query: 61  ----------QQQQVQQQ--------AGEGFVYSGDESPPRS--SLVMLRSGRNGGGQVI 120
                     QQQQ QQQ        AG G   S       S  +L+M+RSG   GG   
Sbjct: 61  QHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGP-- 120

Query: 121 SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSD--------- 180
           SCQDCGNQ+KKDC HMRCRTCCKSRG DC THVKSTWVPA+KRRER  +           
Sbjct: 121 SCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLG 180

Query: 181 GTNLKRPRDNTAA--------------SSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQ 240
           G+  KR R+   A              +SGLE+GNFP EVSS+AVFRCVR++++D+  ++
Sbjct: 181 GSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEEE 240

Query: 241 FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTME---LP 260
           +AY+TAV+IGGH FKG+LYD GP ++        P +    G +   ++P+ +     + 
Sbjct: 241 YAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSPNVSCNNGVVG 300

[Close]

BLAST of Csor.00g023620 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 184.1 bits (466), Expect = 4.1e-45
Identity = 112/236 (47.46%), Postives = 143/236 (60.59%), Query Frame = 0


Query: 64  SSLVMLRSGRNGGGQ-VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASK 123
           ++++M+RSG +GGG   +SCQDCGNQAKKDC HMRCRTCCKSRGF+C THV+STWVPA+K
Sbjct: 125 AAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAK 184

Query: 124 RRERHLR----SDGTNL-------KRPRDNTAAS------------SGLEMGNFPVEVSS 183
           RRER  +       T L       KR R+N  A+            SGLE+GNFP EVSS
Sbjct: 185 RRERQQQLATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFPAEVSS 244

Query: 184 TAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDG 243
           +AVFRCVR++++++  ++FAYQTAV+IGGH FKGILYD GP               S  G
Sbjct: 245 SAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLGPGSSGGGGYNVVAAGESSSG 304

Query: 244 G-------------TLLITAPSTTMELPPI------SAALLDPPPPYPAPLNTYVA 257
           G               + TA S+T  L  I      +A  +DP   YP P+NT++A
Sbjct: 305 GGGAQQLNLITAGSVTVATASSSTPNLGGIGSSSAAAATYIDPAALYPTPINTFMA 360

[Close]

BLAST of Csor.00g023620 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 5.9e-44
Identity = 133/345 (38.55%), Postives = 175/345 (50.72%), Query Frame = 0


Query: 1   MAGFYPLGGGREPNYHLPTTT----TTTTDGLFWYRN--------------YESLEIW-- 60
           MA F+ LGG +E  +   +++     T ++  F YRN              Y+  E+W  
Sbjct: 1   MANFFSLGGNQEQQHQEISSSQALVPTESNNWFLYRNEHHHHHHNQEIPNTYKGFELWQS 60

Query: 61  --------QQQQVQQQ----------------------AGEGF-VYSGDESPPRSSLVML 120
                   Q  Q QQQ                      +  GF + +GD    RS  VM+
Sbjct: 61  GNTPQHQHQHHQQQQQFRHPIYPLQDLYSTDVGLGVGPSRSGFDISAGDHEASRSGFVMM 120

Query: 121 RSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLR 180
           RSG  GGG  ISCQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRRER  +
Sbjct: 121 RSG--GGG--ISCQDCGNQAKKDCQHMRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQ 180

Query: 181 --------------SDGTNLKRPRDNTAASS-----------GLEMGNFPVEVSSTAVFR 240
                         ++    KR R++ +ASS           GLE+G FP +V ++AVF+
Sbjct: 181 LAALQQQQQGHNNNNNNHKNKRQREDPSASSLVSTRLPSNTNGLEVGKFPSKVRTSAVFQ 240

Query: 241 CVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQ--QQPPPPPPPNSASPDGG-- 258
           C++M+++++  DQ AYQ AV+IGGH FKGILYD G E Q           +S    GG  
Sbjct: 241 CIQMSSIEDDEDQLAYQAAVSIGGHVFKGILYDQGHESQYNNMVAAGGDTSSGGSAGGVQ 300

[Close]

BLAST of Csor.00g023620 vs. NCBI nr
Match: KAG6600597.1 (Protein RTE1-HOMOLOG, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1084 bits (2803), Expect = 0.0
Identity = 527/527 (100.00%), Postives = 527/527 (100.00%), Query Frame = 0


Query: 1   MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDES 60
           MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDES
Sbjct: 1   MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDES 60

Query: 61  PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA 120
           PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA
Sbjct: 61  PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA 120

Query: 121 SKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAY 180
           SKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAY
Sbjct: 121 SKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAY 180

Query: 181 QTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAAL 240
           QTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAAL
Sbjct: 181 QTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAAL 240

Query: 241 LDPPPPYPAPLNTYVAAVYQRCLKVQFNVSVGSRSAFRFRVVHTIFLHQNCSDRKHLITL 300
           LDPPPPYPAPLNTYVAAVYQRCLKVQFNVSVGSRSAFRFRVVHTIFLHQNCSDRKHLITL
Sbjct: 241 LDPPPPYPAPLNTYVAAVYQRCLKVQFNVSVGSRSAFRFRVVHTIFLHQNCSDRKHLITL 300

Query: 301 EMGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDG 360
           EMGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDG
Sbjct: 301 EMGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDG 360

Query: 361 VILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALR 420
           VILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALR
Sbjct: 361 VILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALR 420

Query: 421 RSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRT 480
           RSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRT
Sbjct: 421 RSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRT 480

Query: 481 FLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 527
           FLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL
Sbjct: 481 FLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 527

[Close]

BLAST of Csor.00g023620 vs. NCBI nr
Match: KAG7031235.1 (Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 533 bits (1374), Expect = 8.59e-187
Identity = 257/257 (100.00%), Postives = 257/257 (100.00%), Query Frame = 0


Query: 1   MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDES 60
           MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDES
Sbjct: 1   MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDES 60

Query: 61  PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA 120
           PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA
Sbjct: 61  PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA 120

Query: 121 SKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAY 180
           SKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAY
Sbjct: 121 SKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAY 180

Query: 181 QTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAAL 240
           QTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAAL
Sbjct: 181 QTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAAL 240

Query: 241 LDPPPPYPAPLNTYVAA 257
           LDPPPPYPAPLNTYVAA
Sbjct: 241 LDPPPPYPAPLNTYVAA 257

[Close]

BLAST of Csor.00g023620 vs. NCBI nr
Match: XP_023552309.1 (protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 520 bits (1340), Expect = 1.31e-181
Identity = 253/258 (98.06%), Postives = 253/258 (98.06%), Query Frame = 0


Query: 1   MAGFYPLGGGREPNYHLPTTTTTT-TDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDE 60
           MAGFYPLGGGREPNYHLPTTTTTT TDGLFWYRNYESL IWQQQQVQQQAGEGFVYSGDE
Sbjct: 1   MAGFYPLGGGREPNYHLPTTTTTTITDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDE 60

Query: 61  SPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVP 120
           SPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVP
Sbjct: 61  SPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVP 120

Query: 121 ASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFA 180
           ASKRRERHLRSDGTNLKRPRDNTAASSGLEMGN PVEVSSTAVFRCVRMTTLDETNDQFA
Sbjct: 121 ASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNLPVEVSSTAVFRCVRMTTLDETNDQFA 180

Query: 181 YQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAA 240
           YQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGG LLITAPSTTMELPPIS A
Sbjct: 181 YQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGALLITAPSTTMELPPISTA 240

Query: 241 LLDPPPPYPAPLNTYVAA 257
           LLDPPPPYPAPLNTYVAA
Sbjct: 241 LLDPPPPYPAPLNTYVAA 258

[Close]

BLAST of Csor.00g023620 vs. NCBI nr
Match: XP_022942307.1 (protein SHORT INTERNODES-like [Cucurbita moschata] >XP_022942308.1 protein SHORT INTERNODES-like [Cucurbita moschata])

HSP 1 Score: 518 bits (1333), Expect = 1.40e-180
Identity = 252/257 (98.05%), Postives = 253/257 (98.44%), Query Frame = 0


Query: 1   MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDES 60
           MAGF+PLGGGREPNYHLPTTTTTTTDGLFWYRNYESL IWQQQQVQQQAGEGFVYSGDES
Sbjct: 1   MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDES 60

Query: 61  PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA 120
           PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA
Sbjct: 61  PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA 120

Query: 121 SKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAY 180
           SKRRERHLRSDGTNLKRPRDNTAASSGLEM NFPVEVSSTAVFRCVRMTTLDETNDQFAY
Sbjct: 121 SKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAY 180

Query: 181 QTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAAL 240
           QTAVNIGGHTFKGILYDHGPEQQQQPPPPPP NSASPDGG LLITAPSTTMELPPISAAL
Sbjct: 181 QTAVNIGGHTFKGILYDHGPEQQQQPPPPPP-NSASPDGGALLITAPSTTMELPPISAAL 240

Query: 241 LDPPPPYPAPLNTYVAA 257
           LDPPPPYPAPLNTYVAA
Sbjct: 241 LDPPPPYPAPLNTYVAA 256

[Close]

BLAST of Csor.00g023620 vs. NCBI nr
Match: XP_023552316.1 (protein SHI RELATED SEQUENCE 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 511 bits (1317), Expect = 3.78e-178
Identity = 251/258 (97.29%), Postives = 251/258 (97.29%), Query Frame = 0


Query: 1   MAGFYPLGGGREPNYHLPTTTTTT-TDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDE 60
           MAGFYPLGGGREPNYHLPTTTTTT TDGLFWYRNYESL IWQQQQVQQQAGEGFVYSGDE
Sbjct: 1   MAGFYPLGGGREPNYHLPTTTTTTITDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDE 60

Query: 61  SPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVP 120
           SPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVP
Sbjct: 61  SPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVP 120

Query: 121 ASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFA 180
           ASKRRERHLRSDGTNLKRPRDNTAASS  EMGN PVEVSSTAVFRCVRMTTLDETNDQFA
Sbjct: 121 ASKRRERHLRSDGTNLKRPRDNTAASS--EMGNLPVEVSSTAVFRCVRMTTLDETNDQFA 180

Query: 181 YQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAA 240
           YQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGG LLITAPSTTMELPPIS A
Sbjct: 181 YQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGALLITAPSTTMELPPISTA 240

Query: 241 LLDPPPPYPAPLNTYVAA 257
           LLDPPPPYPAPLNTYVAA
Sbjct: 241 LLDPPPPYPAPLNTYVAA 256

[Close]

BLAST of Csor.00g023620 vs. ExPASy TrEMBL
Match: A0A6J1FUH1 (protein SHORT INTERNODES-like OS=Cucurbita moschata OX=3662 GN=LOC111447394 PE=3 SV=1)

HSP 1 Score: 518 bits (1333), Expect = 6.79e-181
Identity = 252/257 (98.05%), Postives = 253/257 (98.44%), Query Frame = 0


Query: 1   MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDES 60
           MAGF+PLGGGREPNYHLPTTTTTTTDGLFWYRNYESL IWQQQQVQQQAGEGFVYSGDES
Sbjct: 1   MAGFFPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDES 60

Query: 61  PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA 120
           PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA
Sbjct: 61  PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA 120

Query: 121 SKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAY 180
           SKRRERHLRSDGTNLKRPRDNTAASSGLEM NFPVEVSSTAVFRCVRMTTLDETNDQFAY
Sbjct: 121 SKRRERHLRSDGTNLKRPRDNTAASSGLEMRNFPVEVSSTAVFRCVRMTTLDETNDQFAY 180

Query: 181 QTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAAL 240
           QTAVNIGGHTFKGILYDHGPEQQQQPPPPPP NSASPDGG LLITAPSTTMELPPISAAL
Sbjct: 181 QTAVNIGGHTFKGILYDHGPEQQQQPPPPPP-NSASPDGGALLITAPSTTMELPPISAAL 240

Query: 241 LDPPPPYPAPLNTYVAA 257
           LDPPPPYPAPLNTYVAA
Sbjct: 241 LDPPPPYPAPLNTYVAA 256

[Close]

BLAST of Csor.00g023620 vs. ExPASy TrEMBL
Match: A0A6J1J480 (protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481193 PE=3 SV=1)

HSP 1 Score: 505 bits (1300), Expect = 6.26e-176
Identity = 247/257 (96.11%), Postives = 250/257 (97.28%), Query Frame = 0


Query: 1   MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDES 60
           MAGF+PLGGGREPNYHLPTTTTT  DGLFWYRNYESL IWQQQQVQQQAGEGFVYSGDES
Sbjct: 1   MAGFFPLGGGREPNYHLPTTTTT--DGLFWYRNYESLGIWQQQQVQQQAGEGFVYSGDES 60

Query: 61  PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA 120
           PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA
Sbjct: 61  PPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPA 120

Query: 121 SKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAY 180
           SKRRERHLRSD TNLKRPRDNTAASSGLEMGNFP+EVSSTAVFRCVRMTTLDETNDQFAY
Sbjct: 121 SKRRERHLRSDATNLKRPRDNTAASSGLEMGNFPMEVSSTAVFRCVRMTTLDETNDQFAY 180

Query: 181 QTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAAL 240
           QTAVNIGGHTFKGILYDHGPEQQQQPPPPP  NSASPDGG LLITAP+TTMELPPISAAL
Sbjct: 181 QTAVNIGGHTFKGILYDHGPEQQQQPPPPP--NSASPDGGALLITAPTTTMELPPISAAL 240

Query: 241 LDPPPPYPAPLNTYVAA 257
           LDPPPPYPAPLNTYVAA
Sbjct: 241 LDPPPPYPAPLNTYVAA 253

[Close]

BLAST of Csor.00g023620 vs. ExPASy TrEMBL
Match: A0A6J1FW19 (protein RTE1-HOMOLOG-like OS=Cucurbita moschata OX=3662 GN=LOC111447395 PE=4 SV=1)

HSP 1 Score: 462 bits (1189), Expect = 1.15e-159
Identity = 225/226 (99.56%), Postives = 225/226 (99.56%), Query Frame = 0


Query: 302 MGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 361
           MGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV
Sbjct: 1   MGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 60

Query: 362 ILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRR 421
           ILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRR
Sbjct: 61  ILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRR 120

Query: 422 STQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTF 481
           STQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTF
Sbjct: 121 STQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTF 180

Query: 482 LPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 527
           LPFGVVFSIGVAM GTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL
Sbjct: 181 LPFGVVFSIGVAMVGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 226

[Close]

BLAST of Csor.00g023620 vs. ExPASy TrEMBL
Match: A0A6J1J2Z1 (protein RTE1-HOMOLOG-like OS=Cucurbita maxima OX=3661 GN=LOC111481385 PE=4 SV=1)

HSP 1 Score: 457 bits (1176), Expect = 1.08e-157
Identity = 222/226 (98.23%), Postives = 223/226 (98.67%), Query Frame = 0


Query: 302 MGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 361
           MGSSNDPENQMMIEGNVVQ+MKIDPE ARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV
Sbjct: 1   MGSSNDPENQMMIEGNVVQEMKIDPESARFPCCIVWTPLPVISWLIPFIGHIGIGREDGV 60

Query: 362 ILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRR 421
           ILDFA PNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRR
Sbjct: 61  ILDFADPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDDALRR 120

Query: 422 STQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTF 481
           STQEFQHR YNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTF
Sbjct: 121 STQEFQHRPYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAVIRTF 180

Query: 482 LPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 527
           LPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL
Sbjct: 181 LPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 226

[Close]

BLAST of Csor.00g023620 vs. ExPASy TrEMBL
Match: A0A0A0KXZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1)

HSP 1 Score: 434 bits (1115), Expect = 2.22e-148
Identity = 208/230 (90.43%), Postives = 219/230 (95.22%), Query Frame = 0


Query: 298 ITLEMGSSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGR 357
           ++LEM SS DPENQ+MIEGN+ Q MKIDPERARFPCCIVWTPLPVISWL+PFIGHIGIGR
Sbjct: 1   MSLEMESSKDPENQLMIEGNIAQNMKIDPERARFPCCIVWTPLPVISWLVPFIGHIGIGR 60

Query: 358 EDGVILDFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDEFREVDNGREISTWDD 417
           EDGVILDFAGPNFVCVDNFTFGAVARYLQIN DKCCIS HRSE+E REVD+ REISTWDD
Sbjct: 61  EDGVILDFAGPNFVCVDNFTFGAVARYLQINRDKCCISAHRSEEELREVDHSREISTWDD 120

Query: 418 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSKGAV 477
           ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGF TGGWNVVNLAAL+FLKGRWVSKGAV
Sbjct: 121 ALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFRTGGWNVVNLAALIFLKGRWVSKGAV 180

Query: 478 IRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 527
           IRTFLPF VVFSIG+A+G TTFLTFLAFFTFFLVGWF+LGTYVFKNLVQL
Sbjct: 181 IRTFLPFVVVFSIGLALGDTTFLTFLAFFTFFLVGWFILGTYVFKNLVQL 230

[Close]

BLAST of Csor.00g023620 vs. TAIR 10
Match: AT3G51040.1 (RTE1-homolog )

HSP 1 Score: 280.4 bits (716), Expect = 3.0e-75
Identity = 136/233 (58.37%), Postives = 173/233 (74.25%), Query Frame = 0


Query: 304 SSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVIL 363
           ++ D E++MMI   +   MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVIL
Sbjct: 4   TATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVIL 63

Query: 364 DFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDE---------FREVDNGREIST 423
           DFAGPNFVCVDNF FGAV+RY+QIN +   + + RS             +E D+  +  T
Sbjct: 64  DFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKEPT 123

Query: 424 WDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSK 483
           WDDALR+STQE+QH +YN+LTCNCHSFVANNLNRL   +GGWNVVNLA L+  KGRWV+K
Sbjct: 124 WDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVNK 183

Query: 484 GAVIRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 528
            A++++ LP  +V++IG+ +GG TF+   +     L GWF++GTY FK L+QL
Sbjct: 184 TAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]

BLAST of Csor.00g023620 vs. TAIR 10
Match: AT3G51040.2 (RTE1-homolog )

HSP 1 Score: 280.4 bits (716), Expect = 3.0e-75
Identity = 136/233 (58.37%), Postives = 173/233 (74.25%), Query Frame = 0


Query: 304 SSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVIL 363
           ++ D E++MMI   +   MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVIL
Sbjct: 4   TATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVIL 63

Query: 364 DFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDE---------FREVDNGREIST 423
           DFAGPNFVCVDNF FGAV+RY+QIN +   + + RS             +E D+  +  T
Sbjct: 64  DFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKEPT 123

Query: 424 WDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSK 483
           WDDALR+STQE+QH +YN+LTCNCHSFVANNLNRL   +GGWNVVNLA L+  KGRWV+K
Sbjct: 124 WDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVNK 183

Query: 484 GAVIRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 528
            A++++ LP  +V++IG+ +GG TF+   +     L GWF++GTY FK L+QL
Sbjct: 184 TAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]

BLAST of Csor.00g023620 vs. TAIR 10
Match: AT3G51040.3 (RTE1-homolog )

HSP 1 Score: 280.4 bits (716), Expect = 3.0e-75
Identity = 136/233 (58.37%), Postives = 173/233 (74.25%), Query Frame = 0


Query: 304 SSNDPENQMMIEGNVVQKMKIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVIL 363
           ++ D E++MMI   +   MKIDP+R RFPCCIVWTPLP ISWL+PFIGH+GI REDGVIL
Sbjct: 4   TATDSEHRMMI--GLSDPMKIDPKRDRFPCCIVWTPLPFISWLVPFIGHVGICREDGVIL 63

Query: 364 DFAGPNFVCVDNFTFGAVARYLQINTDKCCISTHRSEDE---------FREVDNGREIST 423
           DFAGPNFVCVDNF FGAV+RY+QIN +   + + RS             +E D+  +  T
Sbjct: 64  DFAGPNFVCVDNFAFGAVSRYIQINKE---MESSRSSSSGMFNGERRYEQEEDSHEKEPT 123

Query: 424 WDDALRRSTQEFQHRAYNLLTCNCHSFVANNLNRLGFVTGGWNVVNLAALMFLKGRWVSK 483
           WDDALR+STQE+QH +YN+LTCNCHSFVANNLNRL   +GGWNVVNLA L+  KGRWV+K
Sbjct: 124 WDDALRKSTQEYQHHSYNILTCNCHSFVANNLNRLSIKSGGWNVVNLATLVLFKGRWVNK 183

Query: 484 GAVIRTFLPFGVVFSIGVAMGGTTFLTFLAFFTFFLVGWFVLGTYVFKNLVQL 528
            A++++ LP  +V++IG+ +GG TF+   +     L GWF++GTY FK L+QL
Sbjct: 184 TAIVKSLLPPLIVYTIGILLGGWTFIASCSILVVLLTGWFIIGTYCFKKLIQL 231

[Close]

BLAST of Csor.00g023620 vs. TAIR 10
Match: AT2G26070.1 (Protein of unknown function (DUF778) )

HSP 1 Score: 232.3 bits (591), Expect = 9.2e-61
Identity = 113/210 (53.81%), Postives = 151/210 (71.90%), Query Frame = 0


Query: 323 KIDPERARFPCCIVWTPLPVISWLIPFIGHIGIGREDGVILDFAGPNFVCVDNFTFGAVA 382
           +ID ++++FPCCIVWTPLPV+SWL PFIGHIG+ REDGVILDFAG NF+ VD+F FG  A
Sbjct: 43  EIDTKKSKFPCCIVWTPLPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPA 102

Query: 383 RYLQINTDKCCI----STHRSEDEFREVDNGREISTWDDALRRSTQEFQHRAYNLLTCNC 442
           RYLQ++  KCC+      H  +  F+  D G    TWD+AL  ST+ F+H+ YN+ TCNC
Sbjct: 103 RYLQLDRTKCCLPPNMGGHTCKYGFKHTDFG-TARTWDNALSSSTRSFEHKTYNIFTCNC 162

Query: 443 HSFVANNLNRLGFVTGG---WNVVNLAALMFLKGRWVSKGAVIRTFLPFGVVFSIGVAMG 502
           HSFVAN LNRL +  GG   WN+VN+A L+ +KG+W++  +V+R+FLP  VV S+GV + 
Sbjct: 163 HSFVANCLNRLCY--GGSMEWNMVNVAILLMIKGKWINGSSVVRSFLPCAVVTSLGVVLV 222

Query: 503 GTTFLTFLAFFTFFLVGWFVLGTYVFKNLV 526
           G  FL  L+ F+  L  WF++ TY FKN++
Sbjct: 223 GWPFLIGLSSFSLLLFAWFIIATYCFKNII 249

[Close]

BLAST of Csor.00g023620 vs. TAIR 10
Match: AT5G66350.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 192.2 bits (487), Expect = 1.1e-48
Identity = 132/326 (40.49%), Postives = 175/326 (53.68%), Query Frame = 0


Query: 1   MAGFYPL---GGGREPNYHLPTT---TTTTTDGLFWYRNYES--------------LEIW 60
           MAGF+ L   GGG  P+ H   T   +++ T+   W RN  S              LE+W
Sbjct: 1   MAGFFSLGHGGGGNTPDNHRTNTNNPSSSGTESWLWCRNPNSNADGGEAGPSYKGTLELW 60

Query: 61  ----------QQQQVQQQ--------AGEGFVYSGDESPPRS--SLVMLRSGRNGGGQVI 120
                     QQQQ QQQ        AG G   S       S  +L+M+RSG   GG   
Sbjct: 61  QHPNNQEIIFQQQQQQQQRLDLYTSAAGLGVGPSNRSLIETSGGALMMMRSGSGSGGP-- 120

Query: 121 SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSD--------- 180
           SCQDCGNQ+KKDC HMRCRTCCKSRG DC THVKSTWVPA+KRRER  +           
Sbjct: 121 SCQDCGNQSKKDCSHMRCRTCCKSRGLDCPTHVKSTWVPAAKRRERQQQLSTGQQPQQLG 180

Query: 181 GTNLKRPRDNTAA--------------SSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQ 240
           G+  KR R+   A              +SGLE+GNFP EVSS+AVFRCVR++++D+  ++
Sbjct: 181 GSVPKRQRERIPARSTSMAYTRIPSNNTSGLEVGNFPPEVSSSAVFRCVRVSSVDDEEEE 240

Query: 241 FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTME---LP 260
           +AY+TAV+IGGH FKG+LYD GP ++        P +    G +   ++P+ +     + 
Sbjct: 241 YAYKTAVSIGGHVFKGVLYDQGPAERSSSGGGSQPLNLITAGPSASSSSPNVSCNNGVVG 300

The following BLAST results are available for this feature:

BLAST of Csor.00g023620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SD42	4.2e-74	58.37	Protein RTE1-HOMOLOG OS=Arabidopsis thaliana OX=3702 GN=RTH PE=2 SV=1	[more]
F4ITL6	1.3e-59	53.81	Protein REVERSION-TO-ETHYLENE SENSITIVITY1 OS=Arabidopsis thaliana OX=3702 GN=RT...	[more]
Q9XGX0	1.5e-47	40.49	Protein SHORT INTERNODES OS=Arabidopsis thaliana OX=3702 GN=SHI PE=1 SV=1	[more]
Q9SD40	4.1e-45	47.46	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
K4B6C9	5.9e-44	38.55	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]

BLAST of Csor.00g023620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6600597.1	0.0	100.00	Protein RTE1-HOMOLOG, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7031235.1	8.59e-187	100.00	Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023552309.1	1.31e-181	98.06	protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022942307.1	1.40e-180	98.05	protein SHORT INTERNODES-like [Cucurbita moschata] >XP_022942308.1 protein SHORT...	[more]
XP_023552316.1	3.78e-178	97.29	protein SHI RELATED SEQUENCE 1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g023620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FUH1	6.79e-181	98.05	protein SHORT INTERNODES-like OS=Cucurbita moschata OX=3662 GN=LOC111447394 PE=3...	[more]
A0A6J1J480	6.26e-176	96.11	protein SHI RELATED SEQUENCE 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481193 ...	[more]
A0A6J1FW19	1.15e-159	99.56	protein RTE1-HOMOLOG-like OS=Cucurbita moschata OX=3662 GN=LOC111447395 PE=4 SV=...	[more]
A0A6J1J2Z1	1.08e-157	98.23	protein RTE1-HOMOLOG-like OS=Cucurbita maxima OX=3661 GN=LOC111481385 PE=4 SV=1	[more]
A0A0A0KXZ7	2.22e-148	90.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G044470 PE=4 SV=1	[more]

BLAST of Csor.00g023620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51040.1	3.0e-75	58.37	RTE1-homolog	[more]
AT3G51040.2	3.0e-75	58.37	RTE1-homolog	[more]
AT3G51040.3	3.0e-75	58.37	RTE1-homolog	[more]
AT2G26070.1	9.2e-61	53.81	Protein of unknown function (DUF778)	[more]
AT5G66350.1	1.1e-48	40.49	Lateral root primordium (LRP) protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008496	TMEM222/RTE1	PFAM	PF05608	DUF778	coord: 397..471 e-value: 4.1E-18 score: 66.4 coord: 340..389 e-value: 7.1E-20 score: 72.2
IPR008496	TMEM222/RTE1	PANTHER	PTHR20921	UNCHARACTERIZED	coord: 278..527
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 153..200 e-value: 6.3E-23 score: 78.5
None	No IPR available	PFAM	PF05142	DUF702	coord: 80..201 e-value: 3.6E-51 score: 173.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..148
None	No IPR available	PANTHER	PTHR20921:SF5	SUBFAMILY NOT NAMED	coord: 278..527
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 81..123 e-value: 1.0E-27 score: 93.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g023620.m01	Csor.00g023620.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0010104	regulation of ethylene-activated signaling pathway
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus