Csor.00g022920 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAACCAACCCTTCAACCCAAACCCAATCACAGCCCCAATAGCCCTCCCGTTTGGGACTGTGGAAGCTCTCTCTATGATTCCTTCGAGCTCAATTCCTTCAAACAACACCTTGACTCTGCCTTAGCCTCACGAACCCTCTCCATGCCTCACTTATCCGACCGCCCCACTCCCCCGCCCCCGCCCCCGCCCCGCTCTTGTGTACCTATGTCCAAGGCTTCTTCTAAACTCTCTCGCTCCCTCTACAAACTCCTCCGCTCCCTTTTTCGACCCAAATCTAATTCTAGAACGTCGATCTTTCGGGCTCGAGATCAACCCAAAGATGGATTTTATGTCTTCTATGAAGTCGGGTCGCTCTCTACCATCCCCGAAGTCCCCGAGGCTGACTTTGGGACTGGCCTTTCGCCCGAGATTGGGTCGTTGGTGAGGAAGACTGCTTCTGAGAGGTTCACGGCTAACTCCCTTGGCATCTCTTTGAATATTTGA ATGGAAAAACCAACCCTTCAACCCAAACCCAATCACAGCCCCAATAGCCCTCCCGTTTGGGACTGTGGAAGCTCTCTCTATGATTCCTTCGAGCTCAATTCCTTCAAACAACACCTTGACTCTGCCTTAGCCTCACGAACCCTCTCCATGCCTCACTTATCCGACCGCCCCACTCCCCCGCCCCCGCCCCCGCCCCGCTCTTGTGTACCTATGTCCAAGGCTTCTTCTAAACTCTCTCGCTCCCTCTACAAACTCCTCCGCTCCCTTTTTCGACCCAAATCTAATTCTAGAACGTCGATCTTTCGGGCTCGAGATCAACCCAAAGATGGATTTTATGTCTTCTATGAAGTCGGGTCGCTCTCTACCATCCCCGAAGTCCCCGAGGCTGACTTTGGGACTGGCCTTTCGCCCGAGATTGGGTCGTTGGTGAGGAAGACTGCTTCTGAGAGGTTCACGGCTAACTCCCTTGGCATCTCTTTGAATATTTGA ATGGAAAAACCAACCCTTCAACCCAAACCCAATCACAGCCCCAATAGCCCTCCCGTTTGGGACTGTGGAAGCTCTCTCTATGATTCCTTCGAGCTCAATTCCTTCAAACAACACCTTGACTCTGCCTTAGCCTCACGAACCCTCTCCATGCCTCACTTATCCGACCGCCCCACTCCCCCGCCCCCGCCCCCGCCCCGCTCTTGTGTACCTATGTCCAAGGCTTCTTCTAAACTCTCTCGCTCCCTCTACAAACTCCTCCGCTCCCTTTTTCGACCCAAATCTAATTCTAGAACGTCGATCTTTCGGGCTCGAGATCAACCCAAAGATGGATTTTATGTCTTCTATGAAGTCGGGTCGCTCTCTACCATCCCCGAAGTCCCCGAGGCTGACTTTGGGACTGGCCTTTCGCCCGAGATTGGGTCGTTGGTGAGGAAGACTGCTTCTGAGAGGTTCACGGCTAACTCCCTTGGCATCTCTTTGAATATTTGA MEKPTLQPKPNHSPNSPPVWDCGSSLYDSFELNSFKQHLDSALASRTLSMPHLSDRPTPPPPPPPRSCVPMSKASSKLSRSLYKLLRSLFRPKSNSRTSIFRARDQPKDGFYVFYEVGSLSTIPEVPEADFGTGLSPEIGSLVRKTASERFTANSLGISLNI Homology
BLAST of Csor.00g022920 vs. NCBI nr
Match: KAG6600527.1 (hypothetical protein SDJN03_05760, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 321 bits (822), Expect = 1.86e-110 Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Csor.00g022920 vs. NCBI nr
Match: KAG7031166.1 (hypothetical protein SDJN02_05206, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 320 bits (820), Expect = 3.75e-110 Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0
BLAST of Csor.00g022920 vs. NCBI nr
Match: XP_023544229.1 (uncharacterized protein LOC111803865 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 314 bits (805), Expect = 7.27e-108 Identity = 159/162 (98.15%), Postives = 160/162 (98.77%), Query Frame = 0
BLAST of Csor.00g022920 vs. NCBI nr
Match: XP_022942039.1 (uncharacterized protein LOC111447227 [Cucurbita moschata]) HSP 1 Score: 308 bits (789), Expect = 1.87e-105 Identity = 157/162 (96.91%), Postives = 159/162 (98.15%), Query Frame = 0
BLAST of Csor.00g022920 vs. NCBI nr
Match: XP_022989197.1 (uncharacterized protein LOC111486340 [Cucurbita maxima]) HSP 1 Score: 295 bits (756), Expect = 1.88e-100 Identity = 152/162 (93.83%), Postives = 154/162 (95.06%), Query Frame = 0
BLAST of Csor.00g022920 vs. ExPASy TrEMBL
Match: A0A6J1FQ62 (uncharacterized protein LOC111447227 OS=Cucurbita moschata OX=3662 GN=LOC111447227 PE=4 SV=1) HSP 1 Score: 308 bits (789), Expect = 9.04e-106 Identity = 157/162 (96.91%), Postives = 159/162 (98.15%), Query Frame = 0
BLAST of Csor.00g022920 vs. ExPASy TrEMBL
Match: A0A6J1JF52 (uncharacterized protein LOC111486340 OS=Cucurbita maxima OX=3661 GN=LOC111486340 PE=4 SV=1) HSP 1 Score: 295 bits (756), Expect = 9.09e-101 Identity = 152/162 (93.83%), Postives = 154/162 (95.06%), Query Frame = 0
BLAST of Csor.00g022920 vs. ExPASy TrEMBL
Match: A0A5D3CYZ1 (Putative inactive serine/threonine-protein kinase slob1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004020 PE=4 SV=1) HSP 1 Score: 223 bits (569), Expect = 3.83e-72 Identity = 124/166 (74.70%), Postives = 135/166 (81.33%), Query Frame = 0
BLAST of Csor.00g022920 vs. ExPASy TrEMBL
Match: A0A1S3BTI3 (uncharacterized protein LOC103493107 OS=Cucumis melo OX=3656 GN=LOC103493107 PE=4 SV=1) HSP 1 Score: 223 bits (569), Expect = 3.83e-72 Identity = 124/166 (74.70%), Postives = 135/166 (81.33%), Query Frame = 0
BLAST of Csor.00g022920 vs. ExPASy TrEMBL
Match: A0A6J1C6M4 (uncharacterized protein LOC111008455 OS=Momordica charantia OX=3673 GN=LOC111008455 PE=4 SV=1) HSP 1 Score: 218 bits (554), Expect = 4.95e-70 Identity = 120/150 (80.00%), Postives = 125/150 (83.33%), Query Frame = 0
BLAST of Csor.00g022920 vs. TAIR 10
Match: AT5G41810.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 876 Blast hits to 690 proteins in 132 species: Archae - 0; Bacteria - 38; Metazoa - 180; Fungi - 112; Plants - 59; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink). ) HSP 1 Score: 118.2 bits (295), Expect = 6.0e-27 Identity = 82/176 (46.59%), Postives = 108/176 (61.36%), Query Frame = 0
BLAST of Csor.00g022920 vs. TAIR 10
Match: AT5G41810.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 514 Blast hits to 437 proteins in 98 species: Archae - 0; Bacteria - 21; Metazoa - 115; Fungi - 53; Plants - 52; Viruses - 5; Other Eukaryotes - 268 (source: NCBI BLink). ) HSP 1 Score: 118.2 bits (295), Expect = 6.0e-27 Identity = 82/176 (46.59%), Postives = 108/176 (61.36%), Query Frame = 0
BLAST of Csor.00g022920 vs. TAIR 10
Match: AT1G64340.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41810.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 98.2 bits (243), Expect = 6.4e-21 Identity = 66/144 (45.83%), Postives = 87/144 (60.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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