Csor.00g022820 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAACTGCGTCGAAGTTTTGTCTAGGCGGAGTGAAGAAGAAGAGACGACGACGACGGGGACTACGACAATGATGGAGAAAGAAGAAAGGAAAGGAGGGGGAGTGAGGATAAAGGTAGTGTTGACGAAAGAGGAGCTGCAATGGCTAATGGAGCAAGTTCAGGAGCGAGGAGGGAAAGGGTTAGAAGAATTGTTGGGAGAGATCGAGGGACGAAGAAAAAAAGTAAACGAAGATGGTTCGTGGAGACCTTCTTTGGAGAGTATTATGGAAGTTCCCGAAGTTCCCGATCGGATGGAGTCACTTTCTTCGTAA ATGGGAAACTGCGTCGAAGTTTTGTCTAGGCGGAGTGAAGAAGAAGAGACGACGACGACGGGGACTACGACAATGATGGAGAAAGAAGAAAGGAAAGGAGGGGGAGTGAGGATAAAGGTAGTGTTGACGAAAGAGGAGCTGCAATGGCTAATGGAGCAAGTTCAGGAGCGAGGAGGGAAAGGGTTAGAAGAATTGTTGGGAGAGATCGAGGGACGAAGAAAAAAAGTAAACGAAGATGGTTCGTGGAGACCTTCTTTGGAGAGTATTATGGAAGTTCCCGAAGTTCCCGATCGGATGGAGTCACTTTCTTCGTAA ATGGGAAACTGCGTCGAAGTTTTGTCTAGGCGGAGTGAAGAAGAAGAGACGACGACGACGGGGACTACGACAATGATGGAGAAAGAAGAAAGGAAAGGAGGGGGAGTGAGGATAAAGGTAGTGTTGACGAAAGAGGAGCTGCAATGGCTAATGGAGCAAGTTCAGGAGCGAGGAGGGAAAGGGTTAGAAGAATTGTTGGGAGAGATCGAGGGACGAAGAAAAAAAGTAAACGAAGATGGTTCGTGGAGACCTTCTTTGGAGAGTATTATGGAAGTTCCCGAAGTTCCCGATCGGATGGAGTCACTTTCTTCGTAA MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVPDRMESLSS Homology
BLAST of Csor.00g022820 vs. NCBI nr
Match: KAG6600517.1 (hypothetical protein SDJN03_05750, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 198 bits (503), Expect = 1.12e-63 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of Csor.00g022820 vs. NCBI nr
Match: KAG7031156.1 (hypothetical protein SDJN02_05196, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 194 bits (493), Expect = 3.74e-62 Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0
BLAST of Csor.00g022820 vs. NCBI nr
Match: XP_022942038.1 (uncharacterized protein LOC111447226 [Cucurbita moschata]) HSP 1 Score: 179 bits (453), Expect = 4.58e-56 Identity = 97/104 (93.27%), Postives = 99/104 (95.19%), Query Frame = 0
BLAST of Csor.00g022820 vs. NCBI nr
Match: XP_023543788.1 (uncharacterized protein LOC111803552 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 171 bits (432), Expect = 7.31e-53 Identity = 94/104 (90.38%), Postives = 96/104 (92.31%), Query Frame = 0
BLAST of Csor.00g022820 vs. NCBI nr
Match: KGN53406.1 (hypothetical protein Csa_015211 [Cucumis sativus]) HSP 1 Score: 116 bits (290), Expect = 3.55e-31 Identity = 68/106 (64.15%), Postives = 83/106 (78.30%), Query Frame = 0
BLAST of Csor.00g022820 vs. ExPASy TrEMBL
Match: A0A6J1FTR3 (uncharacterized protein LOC111447226 OS=Cucurbita moschata OX=3662 GN=LOC111447226 PE=4 SV=1) HSP 1 Score: 179 bits (453), Expect = 2.22e-56 Identity = 97/104 (93.27%), Postives = 99/104 (95.19%), Query Frame = 0
BLAST of Csor.00g022820 vs. ExPASy TrEMBL
Match: A0A0A0KZU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052070 PE=4 SV=1) HSP 1 Score: 116 bits (290), Expect = 1.72e-31 Identity = 68/106 (64.15%), Postives = 83/106 (78.30%), Query Frame = 0
BLAST of Csor.00g022820 vs. ExPASy TrEMBL
Match: A0A6J1C443 (uncharacterized protein LOC111008308 OS=Momordica charantia OX=3673 GN=LOC111008308 PE=4 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.16e-21 Identity = 57/112 (50.89%), Postives = 71/112 (63.39%), Query Frame = 0
BLAST of Csor.00g022820 vs. ExPASy TrEMBL
Match: I3T2F8 (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.97e-19 Identity = 51/110 (46.36%), Postives = 74/110 (67.27%), Query Frame = 0
BLAST of Csor.00g022820 vs. ExPASy TrEMBL
Match: A0A5E4GAQ3 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B006467 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.43e-18 Identity = 51/105 (48.57%), Postives = 65/105 (61.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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