Csor.00g022820 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g022820
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr04: 3530925 .. 3531239 (-)
RNA-Seq ExpressionCsor.00g022820
SyntenyCsor.00g022820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAACTGCGTCGAAGTTTTGTCTAGGCGGAGTGAAGAAGAAGAGACGACGACGACGGGGACTACGACAATGATGGAGAAAGAAGAAAGGAAAGGAGGGGGAGTGAGGATAAAGGTAGTGTTGACGAAAGAGGAGCTGCAATGGCTAATGGAGCAAGTTCAGGAGCGAGGAGGGAAAGGGTTAGAAGAATTGTTGGGAGAGATCGAGGGACGAAGAAAAAAAGTAAACGAAGATGGTTCGTGGAGACCTTCTTTGGAGAGTATTATGGAAGTTCCCGAAGTTCCCGATCGGATGGAGTCACTTTCTTCGTAA

mRNA sequence

ATGGGAAACTGCGTCGAAGTTTTGTCTAGGCGGAGTGAAGAAGAAGAGACGACGACGACGGGGACTACGACAATGATGGAGAAAGAAGAAAGGAAAGGAGGGGGAGTGAGGATAAAGGTAGTGTTGACGAAAGAGGAGCTGCAATGGCTAATGGAGCAAGTTCAGGAGCGAGGAGGGAAAGGGTTAGAAGAATTGTTGGGAGAGATCGAGGGACGAAGAAAAAAAGTAAACGAAGATGGTTCGTGGAGACCTTCTTTGGAGAGTATTATGGAAGTTCCCGAAGTTCCCGATCGGATGGAGTCACTTTCTTCGTAA

Coding sequence (CDS)

ATGGGAAACTGCGTCGAAGTTTTGTCTAGGCGGAGTGAAGAAGAAGAGACGACGACGACGGGGACTACGACAATGATGGAGAAAGAAGAAAGGAAAGGAGGGGGAGTGAGGATAAAGGTAGTGTTGACGAAAGAGGAGCTGCAATGGCTAATGGAGCAAGTTCAGGAGCGAGGAGGGAAAGGGTTAGAAGAATTGTTGGGAGAGATCGAGGGACGAAGAAAAAAAGTAAACGAAGATGGTTCGTGGAGACCTTCTTTGGAGAGTATTATGGAAGTTCCCGAAGTTCCCGATCGGATGGAGTCACTTTCTTCGTAA

Protein sequence

MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVPDRMESLSS
Homology
BLAST of Csor.00g022820 vs. NCBI nr
Match: KAG6600517.1 (hypothetical protein SDJN03_05750, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 198 bits (503), Expect = 1.12e-63
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0

Query: 1   MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGK 60
           MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGK
Sbjct: 1   MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGK 60

Query: 61  GLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVPDRMESLSS 104
           GLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVPDRMESLSS
Sbjct: 61  GLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVPDRMESLSS 104

BLAST of Csor.00g022820 vs. NCBI nr
Match: KAG7031156.1 (hypothetical protein SDJN02_05196, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 194 bits (493), Expect = 3.74e-62
Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0

Query: 1   MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGK 60
           MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGK
Sbjct: 1   MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGK 60

Query: 61  GLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVPDRMESLSS 104
           GLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEV DRMESLSS
Sbjct: 61  GLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVLDRMESLSS 104

BLAST of Csor.00g022820 vs. NCBI nr
Match: XP_022942038.1 (uncharacterized protein LOC111447226 [Cucurbita moschata])

HSP 1 Score: 179 bits (453), Expect = 4.58e-56
Identity = 97/104 (93.27%), Postives = 99/104 (95.19%), Query Frame = 0

Query: 1   MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGK 60
           MGNCVEVLSRR EEEE TTT TTT+MEKEERKG  VRIKVVLTKEELQWLMEQVQERGGK
Sbjct: 1   MGNCVEVLSRRREEEEMTTTATTTIMEKEERKGR-VRIKVVLTKEELQWLMEQVQERGGK 60

Query: 61  GLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVPDRMESLSS 104
           GLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVPDRM+SLSS
Sbjct: 61  GLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVPDRMDSLSS 103

BLAST of Csor.00g022820 vs. NCBI nr
Match: XP_023543788.1 (uncharacterized protein LOC111803552 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 171 bits (432), Expect = 7.31e-53
Identity = 94/104 (90.38%), Postives = 96/104 (92.31%), Query Frame = 0

Query: 1   MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGK 60
           MGNCVEVLSRR EEE T TT TTT MEKEERKGG VRIKVVLTKEELQWLMEQVQERGGK
Sbjct: 1   MGNCVEVLSRRREEEGTMTTTTTTTMEKEERKGG-VRIKVVLTKEELQWLMEQVQERGGK 60

Query: 61  GLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVPDRMESLSS 104
           GLEELLGEIE RR+KV+EDGSWRPSLESIMEVPEVPDRME LSS
Sbjct: 61  GLEELLGEIERRRRKVDEDGSWRPSLESIMEVPEVPDRMEPLSS 103

BLAST of Csor.00g022820 vs. NCBI nr
Match: KGN53406.1 (hypothetical protein Csa_015211 [Cucumis sativus])

HSP 1 Score: 116 bits (290), Expect = 3.55e-31
Identity = 68/106 (64.15%), Postives = 83/106 (78.30%), Query Frame = 0

Query: 1   MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGK 60
           MGNCVEVLSR+ EE+ TTTT +T  ME+ E+KGG +RIKVVL KEEL+WL EQ++E+GGK
Sbjct: 1   MGNCVEVLSRQREEDGTTTTTSTREMEEREKKGG-MRIKVVLRKEELEWLTEQIKEKGGK 60

Query: 61  GLEELLGEIE-GRRKK------VNEDGSWRPSLESIMEVPEVPDRM 99
            LEELL EIE GRR+K      +  + SW+PSLESIME PE+PD M
Sbjct: 61  CLEELLEEIERGRREKTVMNCSIQYNVSWKPSLESIMECPEIPDHM 105

BLAST of Csor.00g022820 vs. ExPASy TrEMBL
Match: A0A6J1FTR3 (uncharacterized protein LOC111447226 OS=Cucurbita moschata OX=3662 GN=LOC111447226 PE=4 SV=1)

HSP 1 Score: 179 bits (453), Expect = 2.22e-56
Identity = 97/104 (93.27%), Postives = 99/104 (95.19%), Query Frame = 0

Query: 1   MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGK 60
           MGNCVEVLSRR EEEE TTT TTT+MEKEERKG  VRIKVVLTKEELQWLMEQVQERGGK
Sbjct: 1   MGNCVEVLSRRREEEEMTTTATTTIMEKEERKGR-VRIKVVLTKEELQWLMEQVQERGGK 60

Query: 61  GLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVPDRMESLSS 104
           GLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVPDRM+SLSS
Sbjct: 61  GLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVPDRMDSLSS 103

BLAST of Csor.00g022820 vs. ExPASy TrEMBL
Match: A0A0A0KZU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052070 PE=4 SV=1)

HSP 1 Score: 116 bits (290), Expect = 1.72e-31
Identity = 68/106 (64.15%), Postives = 83/106 (78.30%), Query Frame = 0

Query: 1   MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGK 60
           MGNCVEVLSR+ EE+ TTTT +T  ME+ E+KGG +RIKVVL KEEL+WL EQ++E+GGK
Sbjct: 1   MGNCVEVLSRQREEDGTTTTTSTREMEEREKKGG-MRIKVVLRKEELEWLTEQIKEKGGK 60

Query: 61  GLEELLGEIE-GRRKK------VNEDGSWRPSLESIMEVPEVPDRM 99
            LEELL EIE GRR+K      +  + SW+PSLESIME PE+PD M
Sbjct: 61  CLEELLEEIERGRREKTVMNCSIQYNVSWKPSLESIMECPEIPDHM 105

BLAST of Csor.00g022820 vs. ExPASy TrEMBL
Match: A0A6J1C443 (uncharacterized protein LOC111008308 OS=Momordica charantia OX=3673 GN=LOC111008308 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.16e-21
Identity = 57/112 (50.89%), Postives = 71/112 (63.39%), Query Frame = 0

Query: 1   MGNCVEVLSRRSEEEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWLMEQVQERGGK 60
           MGNCVE + +  E  E          EK+E KGG +RIKVVLTKEEL+WLME + ERGG+
Sbjct: 1   MGNCVEAVWKPEEAAEE---------EKKEMKGG-MRIKVVLTKEELEWLMEHINERGGR 60

Query: 61  GLEELLGEIE---GRRKK---------VNEDGSWRPSLESIMEVPEVPDRME 100
            LE+LL EI+   GRR +          N   SW+PSLESI+E PE+PD M+
Sbjct: 61  NLEDLLEEIQIERGRRSRKVISREALDFNTSASWKPSLESIVECPELPDHMQ 102

BLAST of Csor.00g022820 vs. ExPASy TrEMBL
Match: I3T2F8 (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.97e-19
Identity = 51/110 (46.36%), Postives = 74/110 (67.27%), Query Frame = 0

Query: 1   MGNCVEVLSRRSEE------------EETTTTGTTTMMEKEERKG-GGVRIKVVLTKEEL 60
           MGNC+E  + R ++            EE T T ++  ++  + KG  G+R+K+VLTKEEL
Sbjct: 1   MGNCMETCTLRKQDAMRMQKKQQQKQEEDTKTRSSGFVKINDSKGKNGLRMKIVLTKEEL 60

Query: 61  QWLMEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEVPD 97
           +WLM Q+ E+GG  LE++LGEIE R +++  +GSW+PSLESI+E PE PD
Sbjct: 61  KWLMLQLNEKGGMKLEKVLGEIE-RGREIKVEGSWKPSLESIVEAPESPD 109

BLAST of Csor.00g022820 vs. ExPASy TrEMBL
Match: A0A5E4GAQ3 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B006467 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.43e-18
Identity = 51/105 (48.57%), Postives = 65/105 (61.90%), Query Frame = 0

Query: 1   MGNCVEVLSRRSE----------EEETTTTGTTTMMEKEERKGGGVRIKVVLTKEELQWL 60
           MGNCVE  + R +          E+E        + E    K G VR+K+VLTKEEL+WL
Sbjct: 1   MGNCVETCTERQQGEDQMQQQKHEQEERQNEIRFVKESNLSKDGNVRVKIVLTKEELEWL 60

Query: 61  MEQVQERGGKGLEELLGEIEGRRKKVNEDGSWRPSLESIMEVPEV 95
           M Q+++RGGK LE++L EI+  R KV E   W+PSLESIME PEV
Sbjct: 61  MLQLKDRGGKSLEDVLEEIQRSRAKVEE--GWKPSLESIMECPEV 103

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6600517.11.12e-63100.00hypothetical protein SDJN03_05750, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7031156.13.74e-6299.04hypothetical protein SDJN02_05196, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022942038.14.58e-5693.27uncharacterized protein LOC111447226 [Cucurbita moschata][more]
XP_023543788.17.31e-5390.38uncharacterized protein LOC111803552 [Cucurbita pepo subsp. pepo][more]
KGN53406.13.55e-3164.15hypothetical protein Csa_015211 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A6J1FTR32.22e-5693.27uncharacterized protein LOC111447226 OS=Cucurbita moschata OX=3662 GN=LOC1114472... [more]
A0A0A0KZU91.72e-3164.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G052070 PE=4 SV=1[more]
A0A6J1C4431.16e-2150.89uncharacterized protein LOC111008308 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
I3T2F81.97e-1946.36Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1[more]
A0A5E4GAQ31.43e-1848.57Uncharacterized protein OS=Prunus dulcis OX=3755 GN=ALMOND_2B006467 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availablePANTHERPTHR35704:SF1OS02G0254600 PROTEINcoord: 1..100
NoneNo IPR availablePANTHERPTHR35704OS02G0254600 PROTEINcoord: 1..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g022820.m01Csor.00g022820.m01mRNA